The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	299	16772	2611104		Staphylococcus_phage(93.33%)	19	NA	NA
WP_063284446.1|299_1868_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	60.3	2.0e-13
WP_096533964.1|2256_3120_-	autolysin	NA	A0A1W6JQU5	Staphylococcus_phage	41.7	4.2e-37
WP_014613594.1|3276_3501_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080552908.1|3701_4187_+	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	36.7	3.8e-19
WP_014613592.1|4189_4621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014613591.1|4623_5073_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	36.7	1.0e-10
WP_014613590.1|5239_5950_-	transaldolase	NA	M1PR54	Cyanophage	39.0	2.0e-21
WP_014613589.1|6102_6405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014613588.1|6437_6803_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	51.7	1.2e-25
WP_020219661.1|6799_7147_+	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_110161142.1|7248_8085_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	69.3	2.9e-112
WP_014613585.1|8226_9138_-	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	68.3	9.4e-88
WP_014613584.1|9225_10425_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	80.3	1.8e-179
WP_014613583.1|10888_12469_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	76.0	2.2e-241
WP_014613582.1|12866_13619_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	61.6	3.0e-84
WP_014613581.1|13623_14094_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	53.8	7.1e-39
WP_014613580.1|14152_14404_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	70.6	4.6e-29
WP_014613579.1|14379_15366_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	47.6	7.3e-78
WP_014613578.1|15368_16772_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.3	2.4e-135
>prophage 2
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	453206	493298	2611104	capsid,integrase,tail,terminase,holin,head,portal	Staphylococcus_phage(95.24%)	64	488995:489011	494032:494048
WP_152162911.1|453206_453962_-	CHAP domain-containing protein	NA	A0A1J0MF88	Staphylococcus_phage	97.6	1.8e-148
WP_060830201.1|453974_454229_-|holin	phage holin	holin	A0A1J0MFP5	Staphylococcus_phage	96.4	1.4e-38
WP_099997392.1|454246_456136_-	CHAP domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	98.1	0.0e+00
WP_065354738.1|456259_456634_-	hypothetical protein	NA	A0A1J0MG33	Staphylococcus_phage	100.0	3.6e-54
WP_065354739.1|456666_457938_-	DUF2479 domain-containing protein	NA	A0A1J0MFQ3	Staphylococcus_phage	100.0	4.3e-240
WP_100002505.1|457954_458998_-	SGNH/GDSL hydrolase family protein	NA	A0A1J0MFI8	Staphylococcus_phage	97.4	1.3e-186
WP_100004261.1|459009_459702_-	hypothetical protein	NA	A0A1J0MFD6	Staphylococcus_phage	99.1	3.3e-101
WP_152162910.1|459705_461103_-	hypothetical protein	NA	A0A1J0MF94	Staphylococcus_phage	88.8	2.3e-226
WP_015728840.1|461115_462048_-|tail	phage tail family protein	tail	A0A1J0MF79	Staphylococcus_phage	100.0	1.8e-179
WP_152162909.1|462060_465180_-|tail	phage tail protein	tail	A0A223LI73	Staphylococcus_phage	99.2	8.6e-250
WP_065354074.1|465196_465547_-	hypothetical protein	NA	A0A1J0MFN5	Staphylococcus_phage	99.1	1.9e-57
WP_060830209.1|465576_465957_-|tail	phage tail protein	tail	A0A1J0MFC0	Staphylococcus_phage	100.0	1.1e-63
WP_100005012.1|466016_466670_-|tail	phage major tail protein, TP901-1 family	tail	A0A1J0MG89	Staphylococcus_phage	98.2	4.5e-68
WP_110179342.1|466687_467083_-	hypothetical protein	NA	A0A1J0MF66	Staphylococcus_phage	99.2	3.2e-69
WP_015728834.1|467094_467445_-	HK97 gp10 family phage protein	NA	A0A1J0MFN9	Staphylococcus_phage	100.0	2.4e-60
WP_063282645.1|467444_467750_-	hypothetical protein	NA	A0A1J0MF86	Staphylococcus_phage	100.0	5.8e-50
WP_110160246.1|467746_468079_-|head,tail	phage head-tail connector protein	head,tail	A0A1J0MFR4	Staphylococcus_phage	99.1	2.5e-54
WP_015728832.1|468090_468540_-	Ig domain-containing protein	NA	A0A1J0MFD8	Staphylococcus_phage	100.0	8.4e-74
WP_110179341.1|468629_469541_-|capsid	capsid protein	capsid	A0A1J0MFM8	Staphylococcus_phage	98.7	5.2e-163
WP_110179340.1|469559_470171_-	DUF4355 domain-containing protein	NA	A0A1J0MFG0	Staphylococcus_phage	94.8	5.9e-38
WP_014613564.1|470347_470542_-	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	67.2	6.3e-18
WP_100005016.1|470538_471891_-|head	phage head morphogenesis protein	head	A0A1J0MF61	Staphylococcus_phage	92.7	7.6e-235
WP_101458252.1|471883_473329_-|portal	phage portal protein	portal	A0A1J0MFN1	Staphylococcus_phage	99.0	3.1e-271
WP_037543597.1|473340_474615_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1J0MFI2	Staphylococcus_phage	100.0	5.3e-238
WP_096536443.1|474601_475045_-|terminase	terminase small subunit	terminase	A0A1J0MFQ9	Staphylococcus_phage	99.3	1.4e-73
WP_037543601.1|475332_475758_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1J0MFD1	Staphylococcus_phage	100.0	7.5e-72
WP_063282639.1|475901_476069_-	hypothetical protein	NA	A0A1J0MFF2	Staphylococcus_phage	100.0	1.0e-21
WP_037542749.1|476084_476273_-	DUF1381 domain-containing protein	NA	A0A223LFC9	Staphylococcus_phage	100.0	3.6e-26
WP_152162908.1|476336_476870_-	dUTP pyrophosphatase	NA	A0A1J0MG68	Staphylococcus_phage	97.7	2.2e-89
WP_037542745.1|477019_477286_-	hypothetical protein	NA	A0A1J0MFM5	Staphylococcus_phage	98.9	7.7e-43
WP_152162907.1|477471_477855_-	hypothetical protein	NA	Q4ZD39	Staphylococcus_phage	95.3	1.3e-67
WP_152162906.1|477851_478097_-	hypothetical protein	NA	A0A223LHL9	Staphylococcus_phage	81.9	6.5e-28
WP_096536680.1|478093_478279_-	hypothetical protein	NA	A0A223LFJ6	Staphylococcus_phage	96.7	3.5e-26
WP_063282629.1|478523_479015_-	DUF3310 domain-containing protein	NA	A0A1J0MF65	Staphylococcus_phage	98.8	2.5e-87
WP_152162905.1|479171_479492_-	hypothetical protein	NA	A0A223LFZ4	Staphylococcus_phage	93.4	1.5e-48
WP_152162904.1|479504_479723_-	hypothetical protein	NA	A0A1J0MFH2	Staphylococcus_phage	93.1	8.6e-32
WP_152162903.1|479715_480147_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A1J0MFP7	Staphylococcus_phage	98.6	4.6e-77
WP_152162902.1|480147_480327_-	hypothetical protein	NA	A0A1J0MFQ5	Staphylococcus_phage	94.9	8.3e-25
WP_100008597.1|480320_481097_-	AAA family ATPase	NA	Q4ZC96	Staphylococcus_virus	74.0	1.7e-106
WP_110179335.1|481099_481867_-	replication protein	NA	W5R8N2	Staphylococcus_phage	75.0	8.2e-77
WP_110179334.1|481910_482393_+	hypothetical protein	NA	A0A2H4JC39	uncultured_Caudovirales_phage	65.0	4.5e-49
WP_152162901.1|482408_483080_-	hypothetical protein	NA	A0A1J0MFX6	Staphylococcus_phage	94.5	2.8e-121
WP_110165002.1|483088_483283_-	hypothetical protein	NA	A0A1J0MFK0	Staphylococcus_phage	98.4	7.1e-30
WP_110165003.1|483263_483701_-	single-stranded DNA-binding protein	NA	A0A1J0MFD7	Staphylococcus_phage	99.3	1.0e-76
WP_015728804.1|483700_484369_-	single-stranded DNA-binding protein	NA	A0A1J0MFT8	Staphylococcus_phage	100.0	1.0e-120
WP_060830236.1|484369_484855_-	siphovirus Gp157 family protein	NA	A0A223LGF3	Staphylococcus_phage	98.1	5.0e-80
WP_152162900.1|484838_485102_-	hypothetical protein	NA	A0A223LGS2	Staphylococcus_phage	94.3	5.7e-38
WP_152162899.1|485113_485374_-	DUF1108 family protein	NA	A0A1J0MFI6	Staphylococcus_phage	95.3	6.6e-39
WP_152162898.1|485442_485631_-	hypothetical protein	NA	A0A1J0MFC8	Staphylococcus_phage	98.4	9.7e-24
WP_015728800.1|485618_485843_-	hypothetical protein	NA	A0A1J0MG48	Staphylococcus_phage	100.0	6.1e-33
WP_096536284.1|485913_486093_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
WP_152162897.1|486340_486562_-	hypothetical protein	NA	B5WZL5	Staphylococcus_phage	58.2	1.8e-13
WP_152162896.1|486573_487350_-	transcriptional regulator	NA	Q4ZC33	Staphylococcus_virus	81.4	5.9e-115
WP_015728798.1|487428_487656_+	hypothetical protein	NA	A0A223LFH1	Staphylococcus_phage	98.7	7.3e-34
WP_015728796.1|487925_488120_-	hypothetical protein	NA	A0A1J0MFF3	Staphylococcus_phage	100.0	5.7e-19
WP_037543667.1|488176_488440_+	CRISPR-associated protein Cas2	NA	A0A1J0MFM9	Staphylococcus_phage	100.0	1.8e-44
WP_115821237.1|488618_489374_-	oxidoreductase	NA	A0A1J0MFF4	Staphylococcus_phage	98.4	5.3e-137
488995:489011	attL	GCTATTTTCAAAGCGCG	NA	NA	NA	NA
WP_015728794.1|489389_489659_-	helix-turn-helix transcriptional regulator	NA	H9A0Y0	Staphylococcus_phage	93.3	1.5e-38
WP_099989992.1|489792_490497_+	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC5	Staphylococcus_phage	73.9	2.8e-92
WP_060830528.1|490792_491056_+	hypothetical protein	NA	A0A1W6JQ94	Staphylococcus_phage	65.5	8.0e-24
WP_037543680.1|491103_491541_+	DUF4231 domain-containing protein	NA	A0A1J0MFR0	Staphylococcus_phage	100.0	4.3e-75
WP_037543682.1|491534_491942_+	TIR domain-containing protein	NA	A0A1J0MFJ5	Staphylococcus_phage	100.0	3.4e-74
WP_037543684.1|491938_492136_-	hypothetical protein	NA	A0A1J0MFE5	Staphylococcus_phage	100.0	4.3e-30
WP_063282612.1|492251_493298_+|integrase	site-specific integrase	integrase	A0A223LI82	Staphylococcus_phage	53.7	8.8e-106
494032:494048	attR	GCTATTTTCAAAGCGCG	NA	NA	NA	NA
>prophage 3
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	670132	690813	2611104	integrase	Streptococcus_phage(94.74%)	23	661955:661970	689921:689936
661955:661970	attL	TGAATAAAGGCATATA	NA	NA	NA	NA
WP_152162991.1|670132_670447_+	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	99.0	4.4e-53
WP_000985015.1|670462_670849_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|670877_672263_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|672265_672418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|672440_673646_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|673688_673910_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|674026_674524_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|674498_675005_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|674988_677436_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_152162984.1|677549_679703_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	94.4	4.0e-312
WP_000769868.1|679611_680613_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224319.1|680609_681542_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_011058339.1|681816_681903_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691727.1|681918_683838_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	100.0	0.0e+00
WP_011058338.1|683938_684124_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
WP_001227347.1|684183_684537_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_013670292.1|684741_684813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000804885.1|685041_685464_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|685460_685691_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_001845478.1|685916_686168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000814511.1|686151_686355_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_020220015.1|686436_687654_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	99.8	1.4e-232
WP_063279007.1|689034_690813_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.0	1.2e-51
689921:689936	attR	TGAATAAAGGCATATA	NA	NA	NA	NA
>prophage 4
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	1340973	1399837	2611104	protease,transposase,tRNA,integrase	Bacillus_phage(20.0%)	57	1351205:1351219	1400002:1400016
WP_014614776.1|1340973_1343433_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	40.6	1.5e-132
WP_063278652.1|1344113_1344965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063278651.1|1344961_1346182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063278650.1|1346201_1347014_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA	NA
WP_096536525.1|1347010_1347973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614771.1|1347987_1348692_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	4.6e-18
WP_014614770.1|1348678_1349425_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014614769.1|1349811_1351182_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_014614768.1|1351200_1352262_+	PIN/TRAM domain-containing protein	NA	NA	NA	NA	NA
1351205:1351219	attL	ATTTTATTAAATTAT	NA	NA	NA	NA
WP_020219942.1|1352262_1352961_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_014614766.1|1352953_1353433_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_037543943.1|1353509_1354964_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_014614764.1|1355375_1356017_+	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_014614763.1|1356000_1357401_+|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	29.3	3.0e-53
WP_014614762.1|1357393_1357795_+	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_014614761.1|1357800_1358550_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_031253855.1|1358553_1359078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037543938.1|1359154_1359727_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_014614758.1|1359795_1359942_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_014614757.1|1359959_1360139_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_014614756.1|1360157_1360706_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	31.7	1.1e-11
WP_014614755.1|1360870_1361293_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_014614754.1|1361484_1362180_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_014614753.1|1362467_1362968_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_014614752.1|1363008_1363374_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_014614751.1|1363451_1364060_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_014614750.1|1364272_1367827_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	23.6	8.0e-50
WP_014614749.1|1368061_1371682_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.9	3.3e-67
WP_014614748.1|1371859_1372114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614747.1|1372209_1372623_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_014614746.1|1372703_1373174_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_014614745.1|1373316_1375398_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.6	2.2e-60
WP_014614744.1|1375579_1376767_+	elongation factor Tu	NA	NA	NA	NA	NA
WP_037543937.1|1376879_1377584_-	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_014614742.1|1378169_1379357_-	amidohydrolase	NA	NA	NA	NA	NA
WP_065520775.1|1379466_1380657_+	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	32.3	1.1e-48
WP_014614740.1|1380864_1381824_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_065520702.1|1382033_1382462_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.0	1.9e-14
WP_152162836.1|1382647_1383904_-	MFS transporter	NA	NA	NA	NA	NA
WP_014614738.1|1384927_1386010_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
WP_136084231.1|1386719_1387712_-	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	76.4	8.0e-125
WP_063284850.1|1387949_1388648_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_015728623.1|1389207_1389873_-	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	34.8	1.9e-21
WP_015728624.1|1389859_1390483_-	AAA family ATPase	NA	S5M586	Bacillus_phage	31.2	1.4e-13
WP_014614733.1|1390552_1391026_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_014614732.1|1391187_1392054_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_110160858.1|1392272_1392566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110160859.1|1392585_1394781_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_110160860.1|1394780_1395443_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	34.6	2.8e-25
WP_110165109.1|1395622_1396786_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_110160976.1|1396789_1397467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037543923.1|1397478_1397862_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_037543921.1|1397861_1398749_+	DMT family transporter	NA	NA	NA	NA	NA
WP_110160850.1|1398926_1399118_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_110160849.1|1399165_1399579_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	41.2	2.8e-15
WP_081378278.1|1399520_1399766_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A1P8CWQ3	Bacillus_phage	57.1	7.2e-11
WP_110161275.1|1399702_1399837_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
1400002:1400016	attR	ATTTTATTAAATTAT	NA	NA	NA	NA
>prophage 5
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	1436930	1462954	2611104	protease,tRNA,integrase	Hokovirus(50.0%)	29	1434603:1434616	1464061:1464074
1434603:1434616	attL	CGGTTTCATGGTCG	NA	NA	NA	NA
WP_140237274.1|1436930_1437641_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_110161168.1|1437859_1438567_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_096533791.1|1438786_1439497_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_096533792.1|1439704_1440463_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_096533793.1|1440825_1441581_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_096533794.1|1441938_1442646_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_096533795.1|1442978_1443701_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_096533796.1|1444023_1444749_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_096533797.1|1444915_1445632_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_014614671.1|1446253_1446589_+	DUF1450 domain-containing protein	NA	NA	NA	NA	NA
WP_014614670.1|1446998_1447478_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_015728676.1|1447500_1448799_+	HD domain-containing protein	NA	A0A1V0SGM3	Hokovirus	30.6	6.7e-23
WP_037543858.1|1448876_1449392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614667.1|1449607_1450018_+	DUF1934 family protein	NA	NA	NA	NA	NA
WP_015728677.1|1450019_1451678_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_075773640.1|1451720_1452392_-	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
WP_014614664.1|1452420_1452642_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_014614663.1|1453215_1454097_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_037543855.1|1454086_1455037_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_014614661.1|1455093_1455798_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_014614660.1|1455797_1456598_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014614659.1|1456689_1457193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614658.1|1457281_1457998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014614657.1|1458208_1458580_-	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_037543854.1|1460073_1461003_-	DMT family transporter	NA	NA	NA	NA	NA
WP_015728682.1|1461215_1461485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037543853.1|1461825_1462041_-	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_014614653.1|1462056_1462260_-	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_037543851.1|1462402_1462954_+|integrase	tyrosine-type recombinase/integrase	integrase	A3F636	Streptococcus_phage	31.7	5.4e-22
1464061:1464074	attR	CGACCATGAAACCG	NA	NA	NA	NA
>prophage 6
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	1562910	1573732	2611104		Salmonella_phage(14.29%)	13	NA	NA
WP_037543794.1|1562910_1563891_+	glycosyltransferase	NA	A0A192Y8W7	Salmonella_phage	42.4	2.4e-65
WP_014614552.1|1564063_1564318_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_037543793.1|1564387_1564987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014614550.1|1565134_1565848_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	41.8	2.7e-50
WP_014614549.1|1565840_1566272_-	6-carboxytetrahydropterin synthase QueD	NA	A0A2H4GYB3	Pseudomonas_phage	30.7	8.0e-05
WP_014614548.1|1566271_1566940_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.1	2.0e-63
WP_014614547.1|1567200_1567794_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.4	6.0e-35
WP_037543791.1|1567777_1568926_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	44.8	5.6e-29
WP_037543789.1|1568922_1569537_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_037543787.1|1569545_1569755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037543786.1|1569765_1570449_+	allophanate hydrolase subunit 1	NA	NA	NA	NA	NA
WP_014614543.1|1570445_1571450_+	biotin-dependent carboxyltransferase family protein	NA	NA	NA	NA	NA
WP_037543783.1|1571794_1573732_+	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	37.5	7.3e-106
>prophage 7
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	1632379	1639127	2611104		Streptococcus_phage(33.33%)	6	NA	NA
WP_014614494.1|1632379_1633312_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.5	3.2e-83
WP_014614493.1|1633917_1634826_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	33.6	7.3e-08
WP_015728762.1|1634827_1635823_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.0	5.3e-52
WP_014614491.1|1635869_1636814_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.6	3.5e-53
WP_014614489.1|1637945_1638533_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.7	1.4e-52
WP_014614488.1|1638629_1639127_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	31.7	5.2e-16
>prophage 8
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	1878919	1887339	2611104		Synechococcus_phage(33.33%)	9	NA	NA
WP_014614280.1|1878919_1879402_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.9	3.1e-21
WP_080552893.1|1879349_1880522_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_014614278.1|1880518_1881220_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.2	1.0e-49
WP_014614277.1|1881222_1881483_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014614276.1|1881484_1882156_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_065354426.1|1882148_1884338_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.3	7.4e-139
WP_014614274.1|1884316_1885738_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.4	3.2e-50
WP_065354425.1|1885741_1886773_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.7	1.2e-62
WP_015728945.1|1886772_1887339_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.9	2.3e-28
>prophage 9
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	2316403	2328740	2611104		Bacillus_phage(25.0%)	14	NA	NA
WP_152162969.1|2316403_2317780_-	RecQ family ATP-dependent DNA helicase	NA	J2YAJ8	Acanthamoeba_polyphaga_lentillevirus	35.2	4.2e-55
WP_037542991.1|2317772_2318720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014613875.1|2318821_2319070_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	53.3	2.3e-17
WP_014613874.1|2319332_2319878_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_096533737.1|2320237_2321995_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	22.1	4.9e-16
WP_026066968.1|2321981_2322704_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.4	5.4e-46
WP_063282605.1|2322815_2323562_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_063284382.1|2323562_2324105_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	29.1	9.7e-08
WP_065520493.1|2324094_2324823_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	32.7	2.2e-10
WP_096533738.1|2324917_2325424_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_014613866.1|2325710_2326598_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.2	3.0e-38
WP_014613865.1|2326637_2327093_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_014613864.1|2327197_2327740_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_015729146.1|2327819_2328740_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	34.1	3.4e-05
>prophage 10
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	2455796	2471910	2611104	tRNA	uncultured_Mediterranean_phage(40.0%)	12	NA	NA
WP_014613731.1|2455796_2457563_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SFI4	Hokovirus	34.1	6.0e-06
WP_014613730.1|2457562_2458834_-|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L0H9	Tupanvirus	24.3	4.6e-16
WP_115807290.1|2459195_2460071_-	SH3 domain-containing protein	NA	A0A0N9SGH1	Paenibacillus_phage	28.3	9.2e-08
WP_014613728.1|2460067_2460520_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_014613727.1|2460532_2462722_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	35.8	5.0e-10
WP_014613726.1|2463078_2463597_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.0	8.9e-27
WP_037544195.1|2463608_2465894_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	2.9e-69
WP_014613724.1|2466010_2468290_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	32.0	7.2e-28
WP_014613723.1|2468431_2468695_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.9	2.0e-06
WP_014613722.1|2468711_2469851_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	1.2e-87
WP_037542836.1|2469868_2470894_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_070407401.1|2470911_2471910_-	Holliday junction branch migration DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	28.7	8.0e-08
>prophage 11
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	2547687	2554092	2611104	transposase,head,portal	Staphylococcus_phage(57.14%)	9	NA	NA
WP_015729310.1|2547687_2547939_-	hypothetical protein	NA	Q4ZB40	Staphylococcus_virus	44.9	5.5e-06
WP_015729311.1|2547953_2548523_-	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_015729312.1|2548706_2548904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037542807.1|2548906_2549281_-	hypothetical protein	NA	A0A1J0MF61	Staphylococcus_phage	68.8	4.7e-38
WP_000195429.1|2549343_2550516_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001028144.1|2550645_2552085_-	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000393259.1|2552085_2552478_-	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_152162955.1|2552462_2553500_-|head	phage head morphogenesis protein	head	A0A1J0MFV1	Staphylococcus_phage	62.5	9.9e-118
WP_152162954.1|2553483_2554092_-|portal	phage portal protein	portal	A0A2P1JTZ3	Anoxybacillus_phage	47.7	1.1e-47
>prophage 12
NZ_CP045084	Staphylococcus pseudintermedius strain KCTC 43134 chromosome, complete genome	2611104	2594568	2602360	2611104	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
WP_063278942.1|2594568_2595825_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	69.5	1.3e-31
WP_015729339.1|2596456_2596768_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	69.9	2.2e-33
WP_014613610.1|2596794_2599227_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	81.8	0.0e+00
WP_015729341.1|2599517_2600699_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	62.5	9.8e-138
WP_110161103.1|2600846_2601800_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	79.7	4.1e-62
WP_014613607.1|2601796_2602360_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	56.8	1.5e-56
