The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP021844	Azospira sp. I09	3770003	1397060	1410067	3770003	tRNA	Prochlorococcus_phage(20.0%)	14	NA	NA
WP_014237029.1|1397060_1398977_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.8	3.5e-129
WP_152089517.1|1399289_1399733_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_014237027.1|1399729_1400527_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_152089518.1|1400532_1401432_-	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	40.7	2.3e-54
WP_152089519.1|1401435_1402428_-	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	33.0	1.8e-31
WP_152089520.1|1402437_1403385_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	R9S8D5	Prochlorococcus_phage	25.5	1.5e-11
WP_152089521.1|1403396_1403945_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	52.9	8.8e-49
WP_152089522.1|1403941_1404832_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	59.6	1.3e-97
WP_152089523.1|1404821_1405751_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	33.1	1.6e-21
WP_152089524.1|1405737_1406799_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	49.0	9.2e-87
WP_152089525.1|1406809_1408135_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	38.5	1.5e-78
WP_172974712.1|1408187_1409357_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_152089526.1|1409353_1409680_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_014237016.1|1409764_1410067_-	integration host factor subunit beta	NA	Q2A099	Sodalis_phage	42.2	1.2e-10
>prophage 2
NZ_AP021844	Azospira sp. I09	3770003	2569244	2576915	3770003		Synechococcus_phage(16.67%)	7	NA	NA
WP_152090171.1|2569244_2569748_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.9	9.0e-16
WP_014235926.1|2569865_2570921_+	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	42.9	4.1e-10
WP_152090172.1|2570930_2572049_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	34.7	5.6e-26
WP_152090173.1|2572059_2572548_+	DUF494 family protein	NA	NA	NA	NA	NA
WP_152090174.1|2572737_2575323_+	DNA topoisomerase III	NA	J3E777	Acanthamoeba_polyphaga_lentillevirus	24.9	6.5e-17
WP_014235930.1|2575412_2575889_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	36.9	5.0e-16
WP_152090175.1|2576003_2576915_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.1	9.9e-13
>prophage 3
NZ_AP021844	Azospira sp. I09	3770003	2967016	3023959	3770003	protease,transposase,integrase	Bacillus_phage(28.57%)	53	2991252:2991270	3028742:3028760
WP_152090375.1|2967016_2967958_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_014235630.1|2968030_2968231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152090376.1|2968362_2969466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152090377.1|2969562_2971437_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_014235627.1|2971516_2971993_-	VOC family protein	NA	NA	NA	NA	NA
WP_130459820.1|2972310_2972787_-	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA	NA
WP_152090378.1|2972797_2973718_-	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA	NA
WP_152090379.1|2973714_2974695_-	ferredoxin-type protein NapG	NA	NA	NA	NA	NA
WP_152090380.1|2974784_2977310_-	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA	NA
WP_014235622.1|2977311_2977560_-	chaperone NapD	NA	NA	NA	NA	NA
WP_152090381.1|2977861_2980063_+	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.2	4.1e-12
WP_152090382.1|2980114_2980948_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	38.4	2.2e-43
WP_152090383.1|2981004_2981910_-	bestrophin	NA	NA	NA	NA	NA
WP_152090384.1|2981906_2982758_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_014235617.1|2982804_2983596_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_152090899.1|2983630_2984890_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_130459828.1|2984886_2987118_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A291L9W9	Bordetella_phage	31.3	2.5e-09
WP_014235614.1|2987149_2987356_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_130459829.1|2987383_2987992_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	35.4	3.1e-18
WP_152090385.1|2988008_2988875_-	YicC family protein	NA	NA	NA	NA	NA
WP_152090386.1|2989012_2989978_+	protein kinase	NA	A0A285PX80	Cedratvirus	24.4	5.4e-09
WP_014235610.1|2989974_2990886_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_130459832.1|2990895_2991612_+	ribonuclease PH	NA	NA	NA	NA	NA
2991252:2991270	attL	GCAGGCCGACGGCGGCACC	NA	NA	NA	NA
WP_152090387.1|2991625_2992534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014235607.1|2992539_2993130_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_152090388.1|2993274_2994510_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_152090900.1|2994600_2996535_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_014236230.1|2996760_2997930_+|integrase	integrase	integrase	A0A1L7DQ84	Ralstonia_phage	39.6	5.5e-48
WP_133247329.1|2998098_2998500_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014236231.1|2998560_2999811_+	TolC family protein	NA	NA	NA	NA	NA
WP_014236232.1|2999807_3001040_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_014236233.1|3001050_3004209_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA	NA
WP_050804349.1|3004244_3004949_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_014236235.1|3004962_3005604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043797801.1|3005674_3005941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014236237.1|3005988_3007326_+	MFS transporter	NA	NA	NA	NA	NA
WP_083834012.1|3007672_3008155_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_014236239.1|3008250_3009189_+	chromate resistance protein	NA	NA	NA	NA	NA
WP_014236240.1|3009185_3010550_+	chromate efflux transporter	NA	A0A219VHC2	Ochrobactrum_phage	59.8	2.3e-29
WP_014236241.1|3010546_3010942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014236242.1|3010938_3011394_+	chromate resistance protein	NA	NA	NA	NA	NA
WP_014236243.1|3011390_3012602_+	MFS transporter	NA	NA	NA	NA	NA
WP_014236244.1|3012699_3013314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043797805.1|3013422_3013785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043797807.1|3013866_3014295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014236245.1|3014523_3015012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014236246.1|3015008_3016919_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_014236247.1|3016915_3018586_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_014236248.1|3018585_3019710_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_152090389.1|3020022_3020832_-	nickel transporter	NA	NA	NA	NA	NA
WP_152090390.1|3021026_3022400_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_014236251.1|3022410_3022899_-	nickel-responsive transcriptional regulator NikR	NA	NA	NA	NA	NA
WP_014236252.1|3023077_3023959_-|protease	protease HtpX	protease	NA	NA	NA	NA
3028742:3028760	attR	GGTGCCGCCGTCGGCCTGC	NA	NA	NA	NA
>prophage 1
NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	397391	72042	78469	397391		Ruegeria_phage(33.33%)	10	NA	NA
WP_152090991.1|72042_72375_-	DUF4031 domain-containing protein	NA	A0A291LA06	Bordetella_phage	59.8	6.3e-26
WP_152090992.1|72371_73094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152090993.1|73097_74831_-	ATP-dependent helicase	NA	A0A1X9HX80	Ruegeria_phage	44.6	9.4e-121
WP_152090994.1|74830_75211_-	hypothetical protein	NA	A0A1X9HVL1	Ruegeria_phage	40.4	2.7e-12
WP_152090995.1|75207_75648_-	hypothetical protein	NA	A0A2H4IB20	Erwinia_phage	33.6	9.9e-11
WP_152090996.1|75656_76244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152090997.1|76240_76504_-	hypothetical protein	NA	J7I0T4	Pseudomonas_phage	43.5	1.5e-06
WP_152090998.1|76500_76989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152090999.1|76985_78104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152091000.1|78175_78469_-	hypothetical protein	NA	Q6V7R0	Burkholderia_virus	58.3	5.0e-27
>prophage 2
NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	397391	219800	230598	397391		Mycobacterium_phage(22.22%)	13	NA	NA
WP_152091180.1|219800_220412_-	hypothetical protein	NA	A0A1B2LRT6	Wolbachia_phage	29.9	1.4e-15
WP_152091181.1|220457_221594_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA	NA
WP_172974840.1|221724_222702_-	hypothetical protein	NA	A0A0A0RRM5	Mycobacterium_phage	28.4	1.4e-09
WP_152091182.1|222752_223025_-	hypothetical protein	NA	A0A2P1CEV8	Mycobacterium_phage	50.0	9.2e-07
WP_152091183.1|223036_224014_-	thymidylate synthase	NA	A0A1S6KUW9	Providencia_phage	33.7	8.3e-42
WP_152091184.1|224122_226084_-	DNA cytosine methyltransferase	NA	Q5QF27	Pseudomonas_virus	45.1	6.1e-161
WP_152091185.1|226211_226538_-	DUF4326 domain-containing protein	NA	A0A142KAL3	Gordonia_phage	47.1	6.6e-20
WP_152091186.1|226543_227677_-	DUF5131 family protein	NA	A0A291AUR0	Sinorhizobium_phage	46.3	2.7e-92
WP_152091187.1|227669_227975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152091188.1|227967_228459_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152091189.1|228471_228939_-	hypothetical protein	NA	A9YX19	Burkholderia_phage	50.4	8.9e-26
WP_152091190.1|229269_229710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_152091191.1|229974_230598_-	hypothetical protein	NA	R9TMR2	Vibrio_phage	39.5	1.4e-34
