assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009176745.1_ASM917674v1	NZ_AP021859	Alteromonas sp. I4	1	115001-115125	1	PILER-CR	no		DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	Orphan	AAAATAACCGCGAACGCATAAATTT	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	NA,NA|121aa|down_3|NZ_AP021859.1_117299_117662_+,NA|182aa|down_5|NZ_AP021859.1_119339_119885_-	NA|234aa|up_9|NZ_AP021859.1_100416_101118_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|361aa|up_8|NZ_AP021859.1_101386_102469_+	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|317aa|up_7|NZ_AP021859.1_102456_103407_+	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster	NA|574aa|up_6|NZ_AP021859.1_103501_105223_-	pfam07519, Tannase, Tannase and feruloyl esterase	NA|825aa|up_5|NZ_AP021859.1_105369_107844_-	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|342aa|up_4|NZ_AP021859.1_108406_109432_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|441aa|up_3|NZ_AP021859.1_109619_110942_+	TIGR00895, transport_protein, benzoate transport	NA|466aa|up_2|NZ_AP021859.1_110983_112381_+	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like	NA|279aa|up_1|NZ_AP021859.1_112417_113254_+	PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated	NA|491aa|up_0|NZ_AP021859.1_113264_114737_+	PRK09088, PRK09088, acyl-CoA synthetase; Validated	NA|95aa|down_0|NZ_AP021859.1_115138_115423_+	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|423aa|down_1|NZ_AP021859.1_115419_116688_+	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins	NA|143aa|down_2|NZ_AP021859.1_116777_117206_+	pfam11215, DUF3010, Protein of unknown function (DUF3010)	NA|121aa|down_3|NZ_AP021859.1_117299_117662_+	NA	NA|241aa|down_4|NZ_AP021859.1_118444_119167_+	pfam07589, VPEP, PEP-CTERM motif	NA|182aa|down_5|NZ_AP021859.1_119339_119885_-	NA	NA|824aa|down_6|NZ_AP021859.1_120562_123034_+	cd02850, E_set_Cellulase_N, N-terminal Early set domain associated with the catalytic domain of cellulase	NA|361aa|down_7|NZ_AP021859.1_123152_124235_+	pfam17996, CE2_N, Carbohydrate esterase 2 N-terminal	NA|249aa|down_8|NZ_AP021859.1_124231_124978_-	pfam02517, Abi, CAAX protease self-immunity	NA|271aa|down_9|NZ_AP021859.1_125097_125910_-	PRK09553, tauD, taurine dioxygenase; Reviewed
GCF_009176745.1_ASM917674v1	NZ_AP021859	Alteromonas sp. I4	2	1657863-1658090	2	PILER-CR	no		DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	Orphan	AGTGGTGGACGTCTGCTGTGGCTCGCAACGAAGTTGTTGAACCAATGCCGTGTGTTTTTTA	61	1	1	1657924-1657945	NZ_AP021859.1_1658091-1658112	NA	2	2	Orphan	DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	NA|112aa|up_7|NZ_AP021859.1_1648144_1648480_-,NA|58aa|down_7|NZ_AP021859.1_1667129_1667303_+	NA|251aa|up_9|NZ_AP021859.1_1645978_1646731_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|448aa|up_8|NZ_AP021859.1_1646788_1648132_+	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family	NA|112aa|up_7|NZ_AP021859.1_1648144_1648480_-	NA	NA|72aa|up_6|NZ_AP021859.1_1648491_1648707_-	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor	NA|595aa|up_5|NZ_AP021859.1_1648706_1650491_-	COG5265, ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]	NA|322aa|up_4|NZ_AP021859.1_1650662_1651628_+	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|182aa|up_3|NZ_AP021859.1_1651636_1652182_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|780aa|up_2|NZ_AP021859.1_1652216_1654556_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|545aa|up_1|NZ_AP021859.1_1654770_1656405_-	cd17589, REC_TPR, phosphoacceptor receiver (REC) domain of uncharacterized tetratricopeptide repeat (TPR)-containing response regulators	NA|350aa|up_0|NZ_AP021859.1_1656658_1657708_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|470aa|down_0|NZ_AP021859.1_1658616_1660026_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|315aa|down_1|NZ_AP021859.1_1661311_1662256_+	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold	NA|182aa|down_2|NZ_AP021859.1_1662255_1662801_+	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|424aa|down_3|NZ_AP021859.1_1662797_1664069_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|403aa|down_4|NZ_AP021859.1_1664083_1665292_+	PRK15072, PRK15072, D-galactonate dehydratase family protein	NA|139aa|down_5|NZ_AP021859.1_1665355_1665772_-	cd12131, HGbI-like, Hell's gate globin I (HGbI) from Methylacidophilum infernorum and related proteins	NA|307aa|down_6|NZ_AP021859.1_1666123_1667044_+	cd06231, M14_REP34-like, Peptidase M14-like domain similar to rapid encystment phenotype 34 (REP34)	NA|58aa|down_7|NZ_AP021859.1_1667129_1667303_+	NA	NA|313aa|down_8|NZ_AP021859.1_1667415_1668354_+	PRK10550, PRK10550, tRNA dihydrouridine(16) synthase DusC	NA|473aa|down_9|NZ_AP021859.1_1668521_1669940_+	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site
GCF_009176745.1_ASM917674v1	NZ_AP021859	Alteromonas sp. I4	3	3836907-3836999	1	CRISPRCasFinder	no		DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	Orphan	GGGCAAACCTTAGCTCCGAGGCTTTTTTA	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	NA|300aa|up_9|NZ_AP021859.1_3823997_3824897_-,NA|51aa|up_0|NZ_AP021859.1_3836345_3836498_-,NA|65aa|down_0|NZ_AP021859.1_3837325_3837520_-,NA|465aa|down_1|NZ_AP021859.1_3837612_3839007_-,NA|54aa|down_2|NZ_AP021859.1_3839197_3839359_-,NA|201aa|down_3|NZ_AP021859.1_3839371_3839974_-,NA|54aa|down_4|NZ_AP021859.1_3840254_3840416_-,NA|205aa|down_5|NZ_AP021859.1_3840430_3841045_-	NA|300aa|up_9|NZ_AP021859.1_3823997_3824897_-	NA	NA|159aa|up_8|NZ_AP021859.1_3825127_3825604_-	COG5017, COG5017, Uncharacterized conserved protein [Function unknown]	NA|144aa|up_7|NZ_AP021859.1_3825600_3826032_-	pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like	NA|261aa|up_6|NZ_AP021859.1_3826024_3826807_-	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis	NA|316aa|up_5|NZ_AP021859.1_3826803_3827751_-	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|468aa|up_4|NZ_AP021859.1_3827740_3829144_-	TIGR03023, Sugar_transferase	NA|1152aa|up_3|NZ_AP021859.1_3830006_3833462_+	smart00060, FN3, Fibronectin type 3 domain	NA|407aa|up_2|NZ_AP021859.1_3833804_3835025_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|328aa|up_1|NZ_AP021859.1_3835231_3836215_-	TIGR04352, hypothetical_protein_imdm_1353, HprK-related kinase A	NA|51aa|up_0|NZ_AP021859.1_3836345_3836498_-	NA	NA|65aa|down_0|NZ_AP021859.1_3837325_3837520_-	NA	NA|465aa|down_1|NZ_AP021859.1_3837612_3839007_-	NA	NA|54aa|down_2|NZ_AP021859.1_3839197_3839359_-	NA	NA|201aa|down_3|NZ_AP021859.1_3839371_3839974_-	NA	NA|54aa|down_4|NZ_AP021859.1_3840254_3840416_-	NA	NA|205aa|down_5|NZ_AP021859.1_3840430_3841045_-	NA	NA|346aa|down_6|NZ_AP021859.1_3841742_3842780_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|593aa|down_7|NZ_AP021859.1_3844323_3846102_+	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B	NA|154aa|down_8|NZ_AP021859.1_3846131_3846593_-	pfam13471, Transglut_core3, Transglutaminase-like superfamily	NA|90aa|down_9|NZ_AP021859.1_3846585_3846855_-	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)
GCF_009176745.1_ASM917674v1	NZ_AP021859	Alteromonas sp. I4	4	3854466-3854541	2	CRISPRCasFinder	no		DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	Orphan	CACATCCGTCGTCCCGGAATCGT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	NA,NA	NA|346aa|up_9|NZ_AP021859.1_3841742_3842780_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|593aa|up_8|NZ_AP021859.1_3844323_3846102_+	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B	NA|154aa|up_7|NZ_AP021859.1_3846131_3846593_-	pfam13471, Transglut_core3, Transglutaminase-like superfamily	NA|90aa|up_6|NZ_AP021859.1_3846585_3846855_-	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)	NA|563aa|up_5|NZ_AP021859.1_3846858_3848547_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|303aa|up_4|NZ_AP021859.1_3849350_3850259_+	cd08411, PBP2_OxyR, The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily	NA|181aa|up_3|NZ_AP021859.1_3850334_3850877_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|217aa|up_2|NZ_AP021859.1_3850869_3851520_+	TIGR02302, conserved_hypothetical_protein, TIGR02302 family protein	NA|313aa|up_1|NZ_AP021859.1_3851542_3852481_+	PRK03918, PRK03918, DNA double-strand break repair ATPase Rad50	NA|346aa|up_0|NZ_AP021859.1_3852964_3854002_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|99aa|down_0|NZ_AP021859.1_3854690_3854987_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|423aa|down_1|NZ_AP021859.1_3855129_3856398_-	pfam01384, PHO4, Phosphate transporter family	NA|239aa|down_2|NZ_AP021859.1_3856714_3857431_-	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|269aa|down_3|NZ_AP021859.1_3857445_3858252_-	PRK14236, PRK14236, phosphate transporter ATP-binding protein; Provisional	NA|530aa|down_4|NZ_AP021859.1_3858257_3859847_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|716aa|down_5|NZ_AP021859.1_3859839_3861987_-	COG4590, COG4590, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|170aa|down_6|NZ_AP021859.1_3862127_3862637_+	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism]	NA|691aa|down_7|NZ_AP021859.1_3862761_3864834_+	TIGR03705, poly_P_kin, polyphosphate kinase 1	NA|511aa|down_8|NZ_AP021859.1_3864830_3866363_+	PRK10854, PRK10854, exopolyphosphatase; Provisional	NA|385aa|down_9|NZ_AP021859.1_3866441_3867596_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain
GCF_009176745.1_ASM917674v1	NZ_AP021859	Alteromonas sp. I4	5	4714383-4714471	3	CRISPRCasFinder	no		DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	Orphan	TTGAATAGATCCCGGGACAAGCCCGGGA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	NA|176aa|up_7|NZ_AP021859.1_4702534_4703062_+,NA|189aa|up_6|NZ_AP021859.1_4703388_4703955_+,NA|384aa|up_3|NZ_AP021859.1_4707451_4708603_-,NA|175aa|down_0|NZ_AP021859.1_4714512_4715037_-,NA|274aa|down_5|NZ_AP021859.1_4719020_4719842_-,NA|151aa|down_7|NZ_AP021859.1_4720331_4720784_-,NA|103aa|down_9|NZ_AP021859.1_4721538_4721847_-	NA|324aa|up_9|NZ_AP021859.1_4699829_4700801_+	cd12833, ZntB-like_1, Salmonella typhimurium Zn2+ transporter ZntB-like subgroup	NA|493aa|up_8|NZ_AP021859.1_4701056_4702535_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|176aa|up_7|NZ_AP021859.1_4702534_4703062_+	NA	NA|189aa|up_6|NZ_AP021859.1_4703388_4703955_+	NA	NA|311aa|up_5|NZ_AP021859.1_4703988_4704921_-	cd11599, HDAC_classII_2, Histone deacetylases and histone-like deacetylases, classII	NA|619aa|up_4|NZ_AP021859.1_4704917_4706774_-	COG0427, ACH1, Acetyl-CoA hydrolase [Energy production and conversion]	NA|384aa|up_3|NZ_AP021859.1_4707451_4708603_-	NA	NA|1036aa|up_2|NZ_AP021859.1_4708921_4712029_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|378aa|up_1|NZ_AP021859.1_4712044_4713178_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|203aa|up_0|NZ_AP021859.1_4713304_4713913_+	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional	NA|175aa|down_0|NZ_AP021859.1_4714512_4715037_-	NA	NA|247aa|down_1|NZ_AP021859.1_4715055_4715796_-	cd16328, RseA_N, N-terminal domain of RseA	NA|174aa|down_2|NZ_AP021859.1_4715792_4716314_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|470aa|down_3|NZ_AP021859.1_4716616_4718026_+	cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4	NA|299aa|down_4|NZ_AP021859.1_4718043_4718940_-	pfam10082, BBP2_2, Putative beta-barrel porin 2	NA|274aa|down_5|NZ_AP021859.1_4719020_4719842_-	NA	NA|109aa|down_6|NZ_AP021859.1_4719987_4720314_+	pfam04993, TfoX_N, TfoX N-terminal domain	NA|151aa|down_7|NZ_AP021859.1_4720331_4720784_-	NA	NA|188aa|down_8|NZ_AP021859.1_4720919_4721483_-	cd04640, CBS_pair_proteobact, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in proteobacteria	NA|103aa|down_9|NZ_AP021859.1_4721538_4721847_-	NA
GCF_009176745.1_ASM917674v1	NZ_AP021860	Alteromonas sp. I4 plasmid pAltI4, complete sequence	1	17-129	1	CRISPRCasFinder	no			Orphan	GAATGTTGAATAAATTCAAGTGTCCAATATAGGATACATAG	41	1	2	58-88|58-88	NZ_AP021860.1_123606-123636|NZ_AP021860.1_123750-123780	NA	1	1	Orphan	DEDDh,WYL,DinG,RT,csa3,Cas9_archaeal,cas3	NA,NA|287aa|down_1|NZ_AP021860.1_1553_2414_+,NA|252aa|down_3|NZ_AP021860.1_3977_4733_-,NA|298aa|down_7|NZ_AP021860.1_9124_10018_-,NA|785aa|down_8|NZ_AP021860.1_10355_12710_+,NA|79aa|down_9|NZ_AP021860.1_12855_13092_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|323aa|down_0|NZ_AP021860.1_344_1313_-	cd00799, INT_Cre_C, C-terminal catalytic domain of Cre recombinase (also called integrase)	NA|287aa|down_1|NZ_AP021860.1_1553_2414_+	NA	NA|386aa|down_2|NZ_AP021860.1_2671_3829_-	pfam04326, AlbA_2, Putative DNA-binding domain	NA|252aa|down_3|NZ_AP021860.1_3977_4733_-	NA	NA|445aa|down_4|NZ_AP021860.1_5163_6498_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|359aa|down_5|NZ_AP021860.1_6551_7628_+	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|338aa|down_6|NZ_AP021860.1_7724_8738_-	PRK02951, PRK02951, DNA replication terminus site-binding protein; Provisional	NA|298aa|down_7|NZ_AP021860.1_9124_10018_-	NA	NA|785aa|down_8|NZ_AP021860.1_10355_12710_+	NA	NA|79aa|down_9|NZ_AP021860.1_12855_13092_-	NA
