The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP034909	Ensifer alkalisoli strain YIC4027 chromosome 1, complete sequence	3690234	861068	914222	3690234	tail,integrase,terminase,head	Sinorhizobium_phage(31.71%)	73	860979:861027	914463:914511
860979:861027	attL	TAAATGGTCGGAGCGGCGGGATTCGAACCCACGACCCCTTGACCCCCAG	NA	NA	NA	NA
WP_151611011.1|861068_862244_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A076G7B8	Sinorhizobium_phage	64.4	1.5e-141
WP_151611012.1|862129_862435_-	helix-turn-helix domain-containing protein	NA	A0A076GCY6	Sinorhizobium_phage	52.5	1.8e-19
WP_151611013.1|862431_862746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611014.1|862742_863153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611015.1|863196_863436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611016.1|863432_863780_-	HNH endonuclease	NA	A0A0U2C107	Paracoccus_phage	62.0	2.3e-31
WP_151611017.1|863955_864369_-	hypothetical protein	NA	Q8W6F3	Sinorhizobium_phage	74.8	1.2e-47
WP_151611018.1|864365_864995_-	hypothetical protein	NA	A0A0U2BXG7	Paracoccus_phage	47.4	9.8e-44
WP_151611019.1|864991_865264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611020.1|865260_865725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611021.1|865721_866177_-	hypothetical protein	NA	A0A2H4J106	uncultured_Caudovirales_phage	33.8	1.2e-11
WP_151611022.1|866179_867145_-	hypothetical protein	NA	A0A2H4J6I3	uncultured_Caudovirales_phage	33.9	6.6e-15
WP_151611023.1|867144_868122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611939.1|868123_868372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611024.1|868389_868722_-	hypothetical protein	NA	A0A076GCZ5	Sinorhizobium_phage	49.0	3.8e-15
WP_151611025.1|868927_869677_+	DUF5131 family protein	NA	I3UM26	Rhodobacter_phage	42.2	6.6e-47
WP_151611026.1|869666_870533_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA	NA
WP_151611940.1|870587_871229_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_151611027.1|871375_871582_+	hypothetical protein	NA	A0A0H5AUC6	Pseudomonas_phage	46.4	3.7e-08
WP_151611028.1|873218_873581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611029.1|873808_874063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611030.1|874109_874505_+	hypothetical protein	NA	A0A076G6G6	Sinorhizobium_phage	83.1	1.9e-53
WP_151611031.1|874501_875242_+	hypothetical protein	NA	A0A291AUT5	Sinorhizobium_phage	63.7	1.2e-77
WP_151611032.1|875238_876621_+	DUF4942 domain-containing protein	NA	A0A2I7RNS1	Vibrio_phage	38.0	3.0e-21
WP_151611941.1|876620_876788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611033.1|876784_877690_+	DNA adenine methylase	NA	A0A0K1LM14	Caulobacter_phage	60.7	3.6e-92
WP_151611034.1|877695_877875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611035.1|877943_878330_+	DUF1064 domain-containing protein	NA	A0A0R6PIZ9	Moraxella_phage	35.8	1.3e-11
WP_151611942.1|879154_879901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611036.1|879897_880323_+	GcrA cell cycle regulator	NA	NA	NA	NA	NA
WP_151611037.1|880341_880941_+	hypothetical protein	NA	A0A076G6H3	Sinorhizobium_phage	38.0	2.0e-17
WP_151611943.1|881159_881633_+	BA14K family protein	NA	NA	NA	NA	NA
WP_151611038.1|882259_882565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611039.1|882685_883306_+	hypothetical protein	NA	F1C5D5	Cronobacter_phage	51.5	8.4e-56
WP_151611040.1|883306_883552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611041.1|883593_884058_+	DUF2280 domain-containing protein	NA	A0A125RNL6	Pseudomonas_phage	57.7	1.6e-38
WP_151611042.1|884044_885442_+|terminase	phage terminase large subunit	terminase	D4N436	Pseudomonas_phage	39.1	3.2e-87
WP_151611043.1|885450_887274_+	DUF1073 domain-containing protein	NA	A0A2H4J4I9	uncultured_Caudovirales_phage	51.2	1.2e-171
WP_127672336.1|887274_887502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611044.1|887545_888691_+	DUF2213 domain-containing protein	NA	A0A2R3UA67	Siphoviridae_environmental_samples	46.6	4.6e-76
WP_151611045.1|888703_889174_+	hypothetical protein	NA	A0A2H4J1G1	uncultured_Caudovirales_phage	60.3	1.9e-36
WP_151611046.1|889199_890174_+	DUF2184 domain-containing protein	NA	A0A2H4J526	uncultured_Caudovirales_phage	76.1	9.2e-142
WP_151611047.1|890186_890528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611048.1|890578_891073_+	hypothetical protein	NA	A0A059VG19	Pseudomonas_phage	41.0	2.2e-19
WP_151611049.1|891072_891432_+	hypothetical protein	NA	A0A076G8G5	Sinorhizobium_phage	75.4	1.9e-44
WP_151611050.1|891428_892466_+|head	head morphogenesis protein	head	A0A076G6I6	Sinorhizobium_phage	49.2	2.9e-77
WP_151611051.1|892465_892912_+	HK97 gp10 family phage protein	NA	W6E8K5	Rhizobium_phage	43.9	4.7e-16
WP_151611052.1|892889_893114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611053.1|893112_893529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611054.1|893544_894033_+	hypothetical protein	NA	W6EKF5	Rhizobium_phage	42.8	3.7e-22
WP_151611055.1|894041_894428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611056.1|894788_896960_+|tail	phage tail tape-measure protein	tail	I6PCW3	Cronobacter_phage	33.5	8.7e-15
WP_151611057.1|896963_897680_+	hypothetical protein	NA	B4UTQ7	Rhizobium_phage	50.2	1.3e-55
WP_151611058.1|897676_898261_+	hypothetical protein	NA	B4UTQ9	Rhizobium_phage	63.9	7.6e-67
WP_151611059.1|898245_898659_+	hypothetical protein	NA	B4UTR0	Rhizobium_phage	51.8	2.8e-31
WP_151611060.1|898662_900759_+	hypothetical protein	NA	B4UTR1	Rhizobium_phage	66.0	3.2e-264
WP_151611061.1|903570_903756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611062.1|903757_905746_-	glycosyltransferase	NA	B6RFH9	Chelonid_alphaherpesvirus	28.9	2.9e-09
WP_151611063.1|906216_907062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611064.1|907149_907530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151611065.1|907533_908310_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_151611066.1|908402_909371_+	glycoside hydrolase family 19 protein	NA	A0A076G6J8	Sinorhizobium_phage	87.3	9.1e-166
WP_151611067.1|909370_909607_+	hypothetical protein	NA	A0A291AUV7	Sinorhizobium_phage	71.6	4.6e-23
WP_151611068.1|909491_909731_+	hypothetical protein	NA	J7F8X5	Agrobacterium_phage	58.8	8.0e-15
WP_151611069.1|909772_910165_+	hypothetical protein	NA	A0A076GD39	Sinorhizobium_phage	74.6	2.1e-44
WP_151611070.1|910175_910415_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611071.1|910743_910917_+	DUF3606 domain-containing protein	NA	NA	NA	NA	NA
WP_151611072.1|911023_911290_+	hypothetical protein	NA	B4UTS3	Rhizobium_phage	85.2	2.1e-40
WP_151611073.1|911290_911803_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_151611074.1|911918_912242_+	succinoglycan biosynthesis protein exoi	NA	NA	NA	NA	NA
WP_151611075.1|912272_913250_+	ATP-dependent DNA ligase	NA	A0A076GD42	Sinorhizobium_phage	69.8	2.7e-125
WP_151611076.1|913307_913802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151611077.1|914012_914222_+	hypothetical protein	NA	A0A0C5AEJ6	Paenibacillus_phage	62.1	2.3e-18
914463:914511	attR	TAAATGGTCGGAGCGGCGGGATTCGAACCCACGACCCCTTGACCCCCAG	NA	NA	NA	NA
>prophage 2
NZ_CP034909	Ensifer alkalisoli strain YIC4027 chromosome 1, complete sequence	3690234	1270563	1281856	3690234	tRNA	uncultured_Mediterranean_phage(77.78%)	12	NA	NA
WP_151611177.1|1270563_1271580_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.1	2.6e-22
WP_151611178.1|1271735_1272554_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.5	8.5e-32
WP_106407792.1|1272546_1273275_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	45.2	3.8e-39
WP_151611179.1|1273354_1274464_+	ATP-binding cassette domain-containing protein	NA	Q6GZ03	Mycoplasma_phage	32.6	4.3e-10
WP_069457789.1|1274658_1274865_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	70.5	1.3e-08
WP_069457788.1|1274942_1275596_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_069457787.1|1275592_1276435_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	44.8	1.3e-46
WP_069457786.1|1276581_1277859_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.4	1.1e-99
WP_151611180.1|1277887_1278658_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.6	3.7e-21
WP_151611181.1|1278654_1279308_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	NA	NA	NA	NA
WP_069457783.1|1279548_1280199_+	biotin biosynthesis protein BioC	NA	NA	NA	NA	NA
WP_151611182.1|1280341_1281856_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	37.6	7.1e-16
>prophage 3
NZ_CP034909	Ensifer alkalisoli strain YIC4027 chromosome 1, complete sequence	3690234	1400312	1407971	3690234	tRNA	Phage_Wrath(16.67%)	6	NA	NA
WP_069456445.1|1400312_1401023_-	transcriptional repressor LexA	NA	A0A1B2APZ3	Phage_Wrath	36.5	3.0e-09
WP_069456444.1|1402166_1403207_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	2.0e-17
WP_151611212.1|1403264_1404419_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	33.9	5.6e-45
WP_106407710.1|1404487_1405180_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	40.0	3.5e-34
WP_151611213.1|1405176_1406208_+	DNA polymerase III subunit delta'	NA	S5WKH4	Pseudomonas_phage	27.0	1.8e-10
WP_151611214.1|1406420_1407971_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	39.6	1.1e-104
>prophage 4
NZ_CP034909	Ensifer alkalisoli strain YIC4027 chromosome 1, complete sequence	3690234	1946354	1961687	3690234	head	Sulfitobacter_phage(30.77%)	15	NA	NA
WP_151611400.1|1946354_1946693_-	DUF1515 domain-containing protein	NA	A0A291AUW4	Sinorhizobium_phage	73.1	5.6e-38
WP_151611401.1|1946689_1946992_-	hypothetical protein	NA	J7F8X5	Agrobacterium_phage	56.9	3.4e-10
WP_151611402.1|1947112_1947922_-	hypothetical protein	NA	L7TLM2	Rhizobium_phage	36.8	7.4e-28
WP_151611403.1|1948002_1948704_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_151611404.1|1948747_1949515_+	membrane-anchored protein	NA	NA	NA	NA	NA
WP_151611405.1|1949600_1950290_-	glycosyltransferase	NA	A0A1B1ITS7	uncultured_Mediterranean_phage	40.4	4.6e-39
WP_151611406.1|1950722_1952696_+	acyltransferase family protein	NA	W6MVL2	Pseudomonas_phage	39.5	6.6e-62
WP_151611407.1|1952764_1953256_-	hypothetical protein	NA	A0A1Y0SVH3	Sinorhizobium_phage	46.0	4.3e-23
WP_151611408.1|1956035_1956500_-	N-acetyltransferase	NA	X2CY06	Brucella_phage	54.9	7.2e-36
WP_151611409.1|1956496_1958125_-	hypothetical protein	NA	F8TUS4	EBPR_podovirus	39.3	6.2e-82
WP_151611410.1|1958121_1958724_-	hypothetical protein	NA	A0A088FAT4	Sulfitobacter_phage	32.0	2.4e-15
WP_151611411.1|1958720_1959317_-	hypothetical protein	NA	A0A088F6W5	Sulfitobacter_phage	37.9	6.9e-23
WP_151611412.1|1959313_1959637_-	hypothetical protein	NA	F8TUS1	EBPR_podovirus	53.2	8.9e-25
WP_151611413.1|1959883_1960879_-|head	head protein	head	A0A088FAT7	Sulfitobacter_phage	73.7	2.1e-133
WP_151611414.1|1961063_1961687_-	hypothetical protein	NA	A0A088F6W8	Sulfitobacter_phage	38.4	4.5e-17
>prophage 5
NZ_CP034909	Ensifer alkalisoli strain YIC4027 chromosome 1, complete sequence	3690234	2277463	2287024	3690234		Vibrio_phage(33.33%)	6	NA	NA
WP_069461430.1|2277463_2279518_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.6	1.1e-35
WP_069461429.1|2279955_2280993_-	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	68.6	8.3e-16
WP_151611519.1|2281026_2282214_-	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	27.5	4.1e-35
WP_151611520.1|2282464_2284330_-	DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	34.9	3.2e-74
WP_069461426.1|2284414_2286394_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	42.4	8.8e-91
WP_069461601.1|2286574_2287024_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	37.0	5.7e-14
>prophage 1
NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	456424	6691	75674	456424	transposase	Stx2-converting_phage(30.0%)	47	NA	NA
WP_151613978.1|6691_7162_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_069456393.1|7562_9137_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	35.1	6.0e-74
WP_069456392.1|9133_9700_+	YecA family protein	NA	NA	NA	NA	NA
WP_151613979.1|9668_10223_-	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
WP_151613980.1|11542_12574_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_069457965.1|12779_13118_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_041414013.1|13114_13462_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	54.2	2.9e-29
WP_069457966.1|13541_15194_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	44.6	1.4e-105
WP_069457967.1|15196_15781_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	32.1	1.1e-17
WP_069457968.1|16226_17015_-	nodulation protein NodJ	NA	NA	NA	NA	NA
WP_069457969.1|17018_17933_-	nodulation factor ABC transporter ATP-binding protein NodI	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.0	5.6e-24
WP_069457970.1|17920_19645_-	nodulation protein NodU	NA	M1ICZ5	Pelagibacter_phage	26.5	3.0e-34
WP_083265283.1|19675_20359_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_069457971.1|20396_21650_-	chitooligosaccharide synthase NodC	NA	M1HH03	Paramecium_bursaria_Chlorella_virus	28.6	6.8e-12
WP_069457972.1|21664_22312_-	chitooligosaccharide deacetylase NodB	NA	NA	NA	NA	NA
WP_069457973.1|22308_22899_-	NodA family N-acyltransferase	NA	NA	NA	NA	NA
WP_069457974.1|24059_25268_-	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
WP_069457975.1|25268_25550_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_069457976.1|25994_27200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069457977.1|27196_27931_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_069457978.1|27930_29256_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_083265284.1|29252_29720_-	polysaccharide biosynthesis protein GtrA	NA	NA	NA	NA	NA
WP_069457979.1|29671_30835_-	UbiA family prenyltransferase	NA	NA	NA	NA	NA
WP_083265285.1|31733_31964_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_151613981.1|32318_34307_-	acyltransferase family protein	NA	A0A166XZF2	Gordonia_phage	30.8	7.1e-64
WP_069458005.1|34400_35324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_069457983.1|41400_42801_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_069457985.1|43727_44708_+	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	33.0	7.6e-19
WP_069457988.1|46312_47107_+	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_106407804.1|50036_50414_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_069457989.1|50486_52268_-	nodulation protein NOLX	NA	NA	NA	NA	NA
WP_106407805.1|52561_53266_-	nodulation protein NolW	NA	NA	NA	NA	NA
WP_083265287.1|53449_53944_+	nodulation protein NolB	NA	NA	NA	NA	NA
WP_069457990.1|53953_54811_+	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein	NA	NA	NA	NA	NA
WP_083265288.1|54823_55456_+	nodulation protein NolU	NA	NA	NA	NA	NA
WP_069457993.1|55452_56076_+	HrpE/YscL family type III secretion apparatus protein	NA	NA	NA	NA	NA
WP_069457994.1|56075_57431_+	EscN/YscN/HrcN family type III secretion system ATPase	NA	NA	NA	NA	NA
WP_069457995.1|57406_57943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069457996.1|57986_59048_+	YscQ/HrcQ family type III secretion apparatus protein	NA	NA	NA	NA	NA
WP_069457997.1|59040_59706_+	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_069458007.1|59708_59990_+	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_069457998.1|59986_60805_+	EscT/YscT/HrcT family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_069457999.1|60801_61839_+	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
WP_069458000.1|62867_63680_+	Effector protein NopP	NA	NA	NA	NA	NA
WP_131820479.1|63732_64056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613982.1|73918_74200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083265143.1|74144_75674_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	44.7	1.8e-120
>prophage 2
NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	456424	104801	165692	456424	transposase,integrase,protease	Ochrobactrum_phage(15.38%)	60	114742:114756	167478:167492
WP_151613983.1|104801_105650_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	34.5	2.4e-37
WP_069456383.1|105598_105949_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_069456631.1|106696_107806_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_069456632.1|107937_108183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069456633.1|108193_108280_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_151613984.1|108292_109999_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_069456634.1|110008_112060_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	28.3	6.0e-34
WP_069456635.1|112074_112683_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_069456636.1|112660_115357_+	sensor histidine kinase KdpD	NA	Q8QNA2	Ectocarpus_siliculosus_virus	26.0	2.0e-08
114742:114756	attL	GATCGAGGCGGACGA	NA	NA	NA	NA
WP_069456637.1|115353_116055_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	32.4	7.6e-29
WP_069456638.1|116431_116761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083265188.1|117482_118049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069456641.1|119491_120079_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_069456642.1|120089_120944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069456643.1|121135_121969_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_015887573.1|122049_122955_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_069456644.1|122982_124008_-	amidohydrolase	NA	NA	NA	NA	NA
WP_069456645.1|124007_125198_-	cytochrome P450	NA	NA	NA	NA	NA
WP_069456646.1|125481_126591_+	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_069456647.1|126991_128392_-	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta	NA	NA	NA	NA	NA
WP_069456671.1|128401_128812_-	NAD(P) transhydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_069456648.1|128811_129960_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_106407724.1|130020_130350_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_069456650.1|130365_131580_-	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_069456651.1|131654_132212_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_069456652.1|132201_132876_-	4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_069456653.1|133083_134325_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_069456654.1|134326_135337_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_069456655.1|135333_136215_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_069456656.1|136216_136921_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	1.0e-12
WP_069456657.1|136913_137720_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.9	2.8e-11
WP_069456658.1|138070_138487_+	DoxX family protein	NA	NA	NA	NA	NA
WP_069456659.1|138663_139266_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_069456660.1|139334_139691_-	DoxX family protein	NA	NA	NA	NA	NA
WP_069456661.1|140055_141168_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.7	1.8e-37
WP_069456672.1|141429_141732_+	DUF3861 domain-containing protein	NA	NA	NA	NA	NA
WP_069456662.1|141794_142262_+	DUF393 domain-containing protein	NA	NA	NA	NA	NA
WP_151613985.1|142719_143631_+	DNA-processing protein DprA	NA	S6BFL3	Thermus_phage	41.5	9.8e-37
WP_151613986.1|143593_144253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613987.1|144286_145531_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_151614014.1|145543_146452_-	DNA-processing protein DprA	NA	NA	NA	NA	NA
WP_151614015.1|146522_147389_-|protease	serine protease	protease	NA	NA	NA	NA
WP_151613988.1|147809_148385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613989.1|148384_148735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613990.1|148932_150009_+	DUF4417 domain-containing protein	NA	NA	NA	NA	NA
WP_151613991.1|150021_150921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613992.1|150905_151505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613993.1|151507_152428_+	DUF4868 domain-containing protein	NA	NA	NA	NA	NA
WP_151613994.1|152867_153245_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	43.5	3.4e-20
WP_151613995.1|153304_153985_-	segregation and condensation protein B	NA	NA	NA	NA	NA
WP_151613996.1|153987_154953_-	DUF1403 family protein	NA	NA	NA	NA	NA
WP_083265180.1|155065_156175_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_069456584.1|156632_156917_+	hypothetical protein	NA	A0A2I6PI07	Pseudomonas_phage	34.8	5.4e-10
WP_069456583.1|158189_158489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106407720.1|160220_161483_+	plasmid partitioning protein RepA	NA	A0A240F4U1	Ochrobactrum_phage	47.1	4.8e-98
WP_069456582.1|161479_162502_+	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	32.4	1.3e-34
WP_069456581.1|162705_163920_+	replication initiation protein RepC	NA	NA	NA	NA	NA
WP_069456580.1|164857_165064_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	51.6	3.9e-10
WP_069456598.1|165230_165572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106407719.1|165578_165692_-|integrase	integrase	integrase	NA	NA	NA	NA
167478:167492	attR	GATCGAGGCGGACGA	NA	NA	NA	NA
>prophage 3
NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	456424	171092	204221	456424	transposase	Wolbachia_phage(16.67%)	25	NA	NA
WP_069456577.1|171092_171545_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_069456576.1|171798_172410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069456575.1|172531_172738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069456400.1|173488_175552_-	DNA recombinase	NA	A0A1B2LRQ3	Wolbachia_phage	24.0	4.4e-08
WP_069456401.1|175541_175739_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083265148.1|176376_176979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_131820446.1|177219_177846_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_069456420.1|178448_178787_+	TrbC/VirB2 family protein	NA	NA	NA	NA	NA
WP_083265147.1|178790_179090_+	type IV secretion system protein VirB3	NA	NA	NA	NA	NA
WP_083265146.1|179451_179619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613997.1|180404_181910_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	26.3	1.0e-14
WP_069456416.1|181909_182644_+|transposase	transposase	transposase	A0A059NT77	Lactococcus_phage	35.0	1.6e-34
WP_151613983.1|182786_183635_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	34.5	2.4e-37
WP_069456383.1|183583_183934_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_069456385.1|184062_184668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151613998.1|184739_185456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083265157.1|185470_185824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083265160.1|185828_187220_-	hypothetical protein	NA	A0A1V0SCZ9	Indivirus	29.2	1.2e-06
WP_083265155.1|187227_188094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069456468.1|191579_192140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_131820448.1|192132_192939_-	DNA-binding response regulator	NA	NA	NA	NA	NA
WP_069456475.1|193382_199367_+	DUF3320 domain-containing protein	NA	NA	NA	NA	NA
WP_069456471.1|199369_200494_+	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_151613999.1|202483_202747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083265143.1|202691_204221_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	44.7	1.8e-120
>prophage 4
NZ_CP034911	Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence	456424	263111	317788	456424	transposase,integrase	Thermus_phage(10.0%)	47	285146:285161	313638:313653
WP_069456388.1|263111_264296_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	31.9	7.3e-08
WP_069457483.1|264304_265366_-	homoserine dehydrogenase	NA	NA	NA	NA	NA
WP_083265254.1|265560_266586_-	ArgP/LysG family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_069457480.1|266582_266903_-	multidrug transporter	NA	NA	NA	NA	NA
WP_069457479.1|266991_268203_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_151614002.1|268241_268931_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_069457477.1|268942_269665_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_069457500.1|269731_270493_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_069457476.1|270530_271313_-	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	22.2	2.9e-05
WP_069457499.1|271497_272181_-	B3/4 domain-containing protein	NA	NA	NA	NA	NA
WP_069457475.1|272227_272851_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_083265253.1|272872_274108_+	hypothetical protein	NA	A0A0B5JD48	Pandoravirus	27.2	3.5e-13
WP_069457473.1|274153_275506_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_069457498.1|275760_276588_+	alpha/beta fold hydrolase	NA	G9VYU4	Mycobacterium_phage	24.3	9.6e-07
WP_069457472.1|276601_278224_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_069457471.1|278568_280524_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.3	3.5e-84
WP_069457470.1|280754_282569_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	26.0	4.3e-07
WP_069457469.1|283227_284232_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_069457468.1|284693_285665_+	GTP-binding protein	NA	NA	NA	NA	NA
285146:285161	attL	GCTCAACAAAACCGAT	NA	NA	NA	NA
WP_069457467.1|285696_286197_+	DUF1097 domain-containing protein	NA	NA	NA	NA	NA
WP_069457466.1|286230_286974_+	nitrile hydratase subunit beta	NA	NA	NA	NA	NA
WP_069457465.1|286996_287614_+	nitrile hydratase subunit alpha	NA	NA	NA	NA	NA
WP_069457464.1|287621_287966_+	nitrile hydratase accessory protein	NA	NA	NA	NA	NA
WP_069457463.1|287988_288666_+	cobalt transporter	NA	NA	NA	NA	NA
WP_069457462.1|288766_289810_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_069457497.1|289866_291102_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_069457461.1|291164_292673_-	amino acid ABC transporter permease/ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.6	6.8e-35
WP_106407780.1|292727_293450_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_069457459.1|293630_294803_-	aminopeptidase P family protein	NA	NA	NA	NA	NA
WP_069457458.1|294849_296049_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_069457457.1|296156_296633_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_069457456.1|296712_297645_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_069457496.1|297759_298368_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_069457455.1|298396_298828_+	DoxX family protein	NA	NA	NA	NA	NA
WP_069457454.1|298910_299516_+	glutathione transferase GstA	NA	NA	NA	NA	NA
WP_069457453.1|299663_299903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069457452.1|299912_300785_-	phosphoenolpyruvate phosphomutase	NA	NA	NA	NA	NA
WP_083265257.1|300759_301404_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_069457451.1|301732_304021_-	AAA family ATPase	NA	A0A0K2FLP8	Brevibacillus_phage	25.0	2.6e-33
WP_069457450.1|304160_304568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069457449.1|304567_305023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069457448.1|305015_307373_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069457447.1|308894_310103_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_151611216.1|310360_311734_+|transposase	ISNCY family transposase	transposase	Q5QGQ8	Porcine_endogenous_retrovirus	27.0	2.3e-05
WP_151611218.1|312884_313916_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
313638:313653	attR	ATCGGTTTTGTTGAGC	NA	NA	NA	NA
WP_069457443.1|315287_316289_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.1	7.0e-44
WP_151614003.1|316414_317788_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
