assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008831325.1_ASM883132v1	NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	1	1291301-1291732	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas8c	Type II-A,Type II-C,Type II-B	GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	6,6,6	6	TypeII-A,TypeII-C,TypeII-B	cas3,DEDDh,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas8c	NA|219aa|up_7|NZ_CP044493.1_1282317_1282974_+,NA|203aa|up_6|NZ_CP044493.1_1283038_1283647_-,NA	NA|361aa|up_9|NZ_CP044493.1_1279082_1280165_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|547aa|up_8|NZ_CP044493.1_1280357_1281998_-	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|219aa|up_7|NZ_CP044493.1_1282317_1282974_+	NA	NA|203aa|up_6|NZ_CP044493.1_1283038_1283647_-	NA	NA|159aa|up_5|NZ_CP044493.1_1283726_1284203_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|276aa|up_4|NZ_CP044493.1_1284281_1285109_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|612aa|up_3|NZ_CP044493.1_1285137_1286973_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|584aa|up_2|NZ_CP044493.1_1287744_1289496_-	pfam08363, GbpC, Glucan-binding protein C	NA|95aa|up_1|NZ_CP044493.1_1289658_1289943_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|298aa|up_0|NZ_CP044493.1_1290258_1291152_+	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell	csn2|350aa|down_0|NZ_CP044493.1_1291783_1292833_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|NZ_CP044493.1_1292829_1293153_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|303aa|down_2|NZ_CP044493.1_1293155_1294064_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1126aa|down_3|NZ_CP044493.1_1294232_1297610_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|292aa|down_4|NZ_CP044493.1_1297828_1298704_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|293aa|down_5|NZ_CP044493.1_1298811_1299690_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|497aa|down_6|NZ_CP044493.1_1299814_1301305_+	PRK07121, PRK07121, FAD-binding protein	NA|392aa|down_7|NZ_CP044493.1_1301314_1302490_+	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily	NA|843aa|down_8|NZ_CP044493.1_1302665_1305194_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|258aa|down_9|NZ_CP044493.1_1305936_1306710_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase
GCF_008831325.1_ASM883132v1	NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	2	1393258-1395971	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL	cas3,DEDDh,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas8c	Type I-E	GGATCACCCCCGCTCGTGCGGGTAAAAT,GGATCACCCCCGCTCGTGCGGGTAAAAT,GGATCACCCCCGCTCGTGCGGGTAAAAT,GGATCACCCCCGCTCGTGCGGGTAAAAT	28,28,28,28	0	0	NA	NA	NA:NA:NA:NA	32,44,44,32	44	TypeI-E	cas3,DEDDh,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas8c	NA,NA|82aa|down_9|NZ_CP044493.1_1407315_1407561_-	NA|469aa|up_9|NZ_CP044493.1_1376179_1377586_-	PRK13511, PRK13511, 6-phospho-beta-galactosidase; Provisional	NA|569aa|up_8|NZ_CP044493.1_1377597_1379304_-	TIGR00394, lac_pts_IIC, phosphotransferase system, lactose specific, IIC component	NA|105aa|up_7|NZ_CP044493.1_1379310_1379625_-	TIGR00823, PTS_system_lactose-specific_IIA_component, phosphotransferase system enzyme II, lactose-specific, factor III	NA|467aa|up_6|NZ_CP044493.1_1379668_1381069_-	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism]	NA|158aa|up_5|NZ_CP044493.1_1381410_1381884_-	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2	NA|327aa|up_4|NZ_CP044493.1_1381900_1382881_-	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed	NA|311aa|up_3|NZ_CP044493.1_1382885_1383818_-	TIGR01231, Tagatose-6-phosphate_kinase, tagatose-6-phosphate kinase	NA|172aa|up_2|NZ_CP044493.1_1383836_1384352_-	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed	NA|143aa|up_1|NZ_CP044493.1_1384377_1384806_-	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed	NA|252aa|up_0|NZ_CP044493.1_1385112_1385868_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	DEDDh|301aa|down_0|NZ_CP044493.1_1395994_1396897_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|314aa|down_1|NZ_CP044493.1_1396898_1397840_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_2|NZ_CP044493.1_1397841_1398489_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|239aa|down_3|NZ_CP044493.1_1398488_1399205_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|407aa|down_4|NZ_CP044493.1_1399210_1400431_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|199aa|down_5|NZ_CP044493.1_1400420_1401017_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|561aa|down_6|NZ_CP044493.1_1401016_1402699_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|929aa|down_7|NZ_CP044493.1_1402691_1405478_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	WYL|328aa|down_8|NZ_CP044493.1_1405667_1406651_-	pfam13280, WYL, WYL domain	NA|82aa|down_9|NZ_CP044493.1_1407315_1407561_-	NA
GCF_008831325.1_ASM883132v1	NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	3	1632836-1633926	3,4,3	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL	cas3,DEDDh,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas8c	 Type I-U?,Type I-U,Type I-C	ATTTCAATCCACGCACCCGTGAAGGGTGCGAC,ATTTCAATCCACGCACCCGTGAAGGGTGCGAC,ATTTCAATCCACGCACCCGTGAAGGGTGCGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	16,15,15	16	TypeI-U?,TypeI-U,TypeI-C	cas3,DEDDh,csm6,csa3,DinG,csn2,cas2,cas1,cas9,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas4,cas8c	NA,NA	NA|163aa|up_9|NZ_CP044493.1_1615456_1615945_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|411aa|up_8|NZ_CP044493.1_1615947_1617180_-	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II	NA|245aa|up_7|NZ_CP044493.1_1617228_1617963_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|307aa|up_6|NZ_CP044493.1_1617977_1618898_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|322aa|up_5|NZ_CP044493.1_1618900_1619866_-	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II	NA|75aa|up_4|NZ_CP044493.1_1619968_1620193_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|326aa|up_3|NZ_CP044493.1_1620252_1621230_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|145aa|up_2|NZ_CP044493.1_1621229_1621664_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|264aa|up_1|NZ_CP044493.1_1621992_1622784_-	PRK07260, PRK07260, enoyl-CoA hydratase; Provisional	NA|215aa|up_0|NZ_CP044493.1_1622947_1623592_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	cas2|98aa|down_0|NZ_CP044493.1_1634073_1634367_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|342aa|down_1|NZ_CP044493.1_1634377_1635403_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|224aa|down_2|NZ_CP044493.1_1635399_1636071_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|292aa|down_3|NZ_CP044493.1_1636072_1636948_-	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG	cas8c|644aa|down_4|NZ_CP044493.1_1636951_1638883_-	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas5|248aa|down_5|NZ_CP044493.1_1638882_1639626_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|803aa|down_6|NZ_CP044493.1_1639726_1642135_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	WYL|325aa|down_7|NZ_CP044493.1_1642379_1643354_-	pfam13280, WYL, WYL domain	NA|82aa|down_8|NZ_CP044493.1_1643637_1643883_-	cd18738, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|102aa|down_9|NZ_CP044493.1_1644021_1644327_-	COG2336, MazE, Growth regulator [Signal transduction mechanisms]
