The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	2009428	411449	420753	2009428		Bacillus_virus(50.0%)	9	NA	NA
WP_002265670.1|411449_412799_+	DEAD/DEAH box helicase	NA	A0A1B1IS59	uncultured_Mediterranean_phage	32.0	1.8e-47
WP_002280831.1|413032_413854_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002265285.1|413876_414680_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_002267023.1|414679_415423_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.6	5.2e-28
WP_002267024.1|415471_415696_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_019313521.1|415758_416673_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.6	3.0e-86
WP_002267026.1|417024_418485_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	39.7	1.7e-94
WP_002267027.1|418481_419306_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	54.5	3.5e-73
WP_002263054.1|419418_420753_+	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	34.2	1.3e-66
>prophage 2
NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	2009428	846863	853713	2009428		Pneumococcus_phage(33.33%)	7	NA	NA
WP_002265143.1|846863_847352_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	57.9	5.6e-47
WP_024785258.1|847364_848081_-	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	48.0	8.2e-63
WP_002263290.1|848077_848524_-	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	60.6	1.1e-41
WP_002263291.1|848523_849177_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	52.4	7.7e-60
WP_002263292.1|849728_850163_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_151416273.1|850166_851969_+	ATP-binding cassette domain-containing protein	NA	F2Y302	Organic_Lake_phycodnavirus	30.7	1.1e-18
WP_019313596.1|851958_853713_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	3.6e-43
>prophage 3
NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	2009428	988849	997633	2009428		Bacillus_phage(50.0%)	7	NA	NA
WP_002264266.1|988849_990565_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	82.5	7.5e-272
WP_151416298.1|990695_992441_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	29.2	2.9e-53
WP_151416299.1|992437_994171_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	26.0	1.4e-39
WP_002262260.1|994180_994795_-	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	37.6	1.2e-22
WP_002265988.1|994796_995774_-	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_151416300.1|995770_997033_-	serine hydroxymethyltransferase	NA	A0A219YB23	Aeromonas_phage	52.1	1.3e-98
WP_002264270.1|997042_997633_-	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	33.2	1.1e-15
>prophage 4
NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	2009428	1540265	1554087	2009428		Streptococcus_phage(84.62%)	18	NA	NA
WP_002266825.1|1540265_1541093_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	76.9	7.4e-124
WP_002264017.1|1541157_1541781_-	endonuclease III	NA	NA	NA	NA	NA
WP_002268057.1|1541845_1542199_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	66.1	1.8e-39
WP_002268058.1|1542235_1542730_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.7	7.4e-47
WP_002291380.1|1542818_1544000_-	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	79.3	1.8e-179
WP_172964892.1|1544085_1544640_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	65.6	1.3e-52
WP_002294716.1|1544790_1544931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002285020.1|1545048_1546140_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	79.3	1.2e-169
WP_002264023.1|1546359_1546701_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_151416393.1|1546716_1547931_-	ammonium transporter	NA	NA	NA	NA	NA
WP_002264025.1|1548235_1549102_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	73.9	1.7e-115
WP_002271433.1|1549107_1549440_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.1	2.1e-29
WP_002274530.1|1549432_1550239_-	signal peptidase II	NA	NA	NA	NA	NA
WP_002280200.1|1550235_1551111_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	53.8	4.9e-78
WP_002264028.1|1551123_1551762_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	65.1	1.3e-75
WP_002264029.1|1551837_1552497_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	60.6	8.6e-67
WP_002262679.1|1552612_1553323_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.9	1.8e-14
WP_002262678.1|1553322_1554087_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.6e-16
>prophage 5
NZ_CP044493	Streptococcus mutans strain MD chromosome, complete genome	2009428	1987071	1995475	2009428		Staphylococcus_phage(16.67%)	9	NA	NA
WP_106006868.1|1987071_1987662_-	transglycosylase SLT domain-containing protein	NA	Q4Z8Z7	Staphylococcus_phage	53.8	7.8e-27
WP_002262447.1|1987823_1988690_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	75.7	1.3e-22
WP_002262448.1|1988878_1989673_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002262449.1|1989665_1990508_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.6	6.1e-17
WP_002262450.1|1990483_1991326_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.0	1.1e-21
WP_002267084.1|1991329_1991872_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_002267085.1|1991883_1992861_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002264239.1|1992933_1994226_-	insulinase family protein	NA	A0A0G2Y5U8	Acanthamoeba_polyphaga_mimivirus	34.7	7.7e-19
WP_002279892.1|1994227_1995475_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	45.7	1.5e-99
