assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	1	1004711-1005105	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,29,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|47aa|up_1|NZ_CP042588.1_1003420_1003561_-,NA	NA|745aa|up_9|NZ_CP042588.1_994027_996262_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_8|NZ_CP042588.1_996339_996588_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_7|NZ_CP042588.1_996587_996923_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_6|NZ_CP042588.1_996993_997785_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_5|NZ_CP042588.1_998012_999650_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_4|NZ_CP042588.1_999737_1001036_+	PRK00077, eno, enolase; Provisional	NA|443aa|up_3|NZ_CP042588.1_1001090_1002419_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|291aa|up_2|NZ_CP042588.1_1002534_1003407_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP042588.1_1003420_1003561_-	NA	NA|224aa|up_0|NZ_CP042588.1_1003699_1004371_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP042588.1_1005743_1007222_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP042588.1_1007248_1008526_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP042588.1_1008844_1009630_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP042588.1_1009699_1011154_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP042588.1_1011247_1012585_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP042588.1_1012562_1013342_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP042588.1_1013338_1014199_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP042588.1_1014346_1014922_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP042588.1_1014938_1015199_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP042588.1_1015189_1016461_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	2	1023339-1023672	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|287aa|up_9|NZ_CP042588.1_1013338_1014199_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|up_8|NZ_CP042588.1_1014346_1014922_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|up_7|NZ_CP042588.1_1014938_1015199_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|up_6|NZ_CP042588.1_1015189_1016461_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|122aa|up_5|NZ_CP042588.1_1016538_1016904_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|NZ_CP042588.1_1017219_1019019_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|NZ_CP042588.1_1019018_1020731_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|NZ_CP042588.1_1020804_1021539_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_1|NZ_CP042588.1_1021803_1021956_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_0|NZ_CP042588.1_1022148_1023261_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|346aa|down_0|NZ_CP042588.1_1023754_1024792_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP042588.1_1025043_1025952_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP042588.1_1025953_1027381_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP042588.1_1027380_1027986_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP042588.1_1028035_1028359_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP042588.1_1028552_1028864_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP042588.1_1028882_1029593_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP042588.1_1029592_1030072_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP042588.1_1030068_1031118_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP042588.1_1031098_1031860_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	3	1477377-1477465	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	GGTTGTCCAACGGTTGTCCAACG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|100aa|up_5|NZ_CP042588.1_1474351_1474651_-,NA|66aa|up_4|NZ_CP042588.1_1474726_1474924_-,NA|123aa|up_3|NZ_CP042588.1_1475019_1475388_-,NA|134aa|down_4|NZ_CP042588.1_1480525_1480927_+	NA|202aa|up_9|NZ_CP042588.1_1472358_1472964_-	pfam04404, ERF, ERF superfamily	NA|51aa|up_8|NZ_CP042588.1_1473220_1473373_-	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein	NA|45aa|up_7|NZ_CP042588.1_1473357_1473492_-	pfam08134, cIII, cIII protein family	NA|208aa|up_6|NZ_CP042588.1_1473716_1474340_-	pfam18757, Nmad5, Nucleotide modification associated domain 5	NA|100aa|up_5|NZ_CP042588.1_1474351_1474651_-	NA	NA|66aa|up_4|NZ_CP042588.1_1474726_1474924_-	NA	NA|123aa|up_3|NZ_CP042588.1_1475019_1475388_-	NA	NA|239aa|up_2|NZ_CP042588.1_1475405_1476122_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|65aa|up_1|NZ_CP042588.1_1476228_1476423_+	pfam09048, Cro, Cro	NA|93aa|up_0|NZ_CP042588.1_1476531_1476810_+	pfam05269, Phage_CII, Bacteriophage CII protein	NA|479aa|down_0|NZ_CP042588.1_1477872_1479309_+	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|147aa|down_1|NZ_CP042588.1_1479385_1479826_+	pfam05772, NinB, NinB protein	NA|176aa|down_2|NZ_CP042588.1_1479822_1480350_+	TIGR01712, DNA_N-6-adenine-methyltransferase_M	NA|59aa|down_3|NZ_CP042588.1_1480346_1480523_+	pfam05322, NinE, NINE Protein	NA|134aa|down_4|NZ_CP042588.1_1480525_1480927_+	NA	NA|70aa|down_5|NZ_CP042588.1_1480886_1481096_+	pfam05810, NinF, NinF protein	NA|204aa|down_6|NZ_CP042588.1_1481088_1481700_+	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|222aa|down_7|NZ_CP042588.1_1481696_1482362_+	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain	NA|208aa|down_8|NZ_CP042588.1_1482358_1482982_+	pfam03589, Antiterm, Antitermination protein	NA|108aa|down_9|NZ_CP042588.1_1483653_1483977_+	TIGR01594, Uncharacterized_protein_HI_1416, phage holin, lambda family
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	4	2243383-2243506	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|30aa|down_7|NZ_CP042588.1_2252402_2252492_+	NA|471aa|up_9|NZ_CP042588.1_2232837_2234250_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP042588.1_2234806_2235016_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP042588.1_2235470_2236097_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP042588.1_2236117_2238220_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP042588.1_2238223_2238871_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP042588.1_2238934_2239603_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP042588.1_2239599_2240385_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP042588.1_2240388_2241201_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP042588.1_2241212_2242817_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP042588.1_2242942_2243248_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP042588.1_2243820_2245077_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP042588.1_2245117_2246491_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP042588.1_2246705_2247347_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP042588.1_2247386_2248535_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP042588.1_2248825_2250037_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP042588.1_2250149_2251082_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP042588.1_2251078_2252104_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP042588.1_2252402_2252492_+	NA	NA|390aa|down_8|NZ_CP042588.1_2252657_2253827_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP042588.1_2254061_2254643_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	5	2908327-2908418	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|60aa|up_7|NZ_CP042588.1_2902486_2902666_-,NA	NA|1321aa|up_9|NZ_CP042588.1_2897667_2901630_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_8|NZ_CP042588.1_2901669_2902308_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|60aa|up_7|NZ_CP042588.1_2902486_2902666_-	NA	NA|364aa|up_6|NZ_CP042588.1_2902595_2903687_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP042588.1_2903686_2904379_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP042588.1_2904390_2904777_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP042588.1_2904784_2905585_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP042588.1_2905594_2906185_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP042588.1_2906195_2906690_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP042588.1_2906710_2908039_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP042588.1_2908841_2909438_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP042588.1_2909458_2909686_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP042588.1_2909723_2910965_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP042588.1_2911257_2912514_-	PRK09784, PRK09784, YccE family protein	NA|327aa|down_4|NZ_CP042588.1_2912701_2913682_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|307aa|down_5|NZ_CP042588.1_2913974_2914895_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_6|NZ_CP042588.1_2914894_2915200_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_7|NZ_CP042588.1_2915351_2915951_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_8|NZ_CP042588.1_2915947_2918494_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_9|NZ_CP042588.1_2918493_2919666_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	6	3173640-3173784	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|330aa|up_9|NZ_CP042588.1_3161538_3162528_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP042588.1_3162924_3163833_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP042588.1_3164024_3166046_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP042588.1_3166624_3167302_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP042588.1_3167294_3168050_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP042588.1_3168036_3169191_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP042588.1_3169187_3170228_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP042588.1_3170314_3171604_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP042588.1_3171662_3172139_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP042588.1_3172290_3173574_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP042588.1_3173807_3176069_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP042588.1_3176251_3177685_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP042588.1_3177760_3178813_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP042588.1_3178996_3179950_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP042588.1_3179990_3180986_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP042588.1_3181140_3181959_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP042588.1_3181959_3183018_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP042588.1_3183020_3183710_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP042588.1_3183709_3184483_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP042588.1_3184649_3184799_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	7	3406368-3406464	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|231aa|up_9|NZ_CP042588.1_3398154_3398847_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP042588.1_3399066_3399609_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP042588.1_3400088_3400955_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP042588.1_3400956_3401169_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP042588.1_3401276_3401798_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP042588.1_3401833_3403219_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP042588.1_3403392_3403887_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP042588.1_3403889_3404612_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP042588.1_3404729_3405239_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP042588.1_3405235_3406303_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP042588.1_3406497_3407391_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP042588.1_3407387_3408203_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP042588.1_3408213_3409473_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP042588.1_3409482_3411150_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP042588.1_3411466_3412516_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP042588.1_3412537_3413773_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP042588.1_3413783_3414569_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP042588.1_3414796_3415942_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP042588.1_3415963_3417265_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP042588.1_3417321_3418683_-	PRK08044, PRK08044, allantoinase AllB
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	8	3547709-3547853	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|28aa|down_2|NZ_CP042588.1_3549898_3549982_-	NA|357aa|up_9|NZ_CP042588.1_3532847_3533918_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP042588.1_3534010_3534592_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP042588.1_3534596_3536414_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP042588.1_3536569_3537943_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP042588.1_3538018_3539338_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP042588.1_3539744_3541040_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP042588.1_3541097_3541787_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP042588.1_3541976_3543179_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP042588.1_3543175_3546322_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP042588.1_3546447_3547632_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP042588.1_3547876_3548785_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP042588.1_3548909_3549821_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP042588.1_3549898_3549982_-	NA	NA|95aa|down_3|NZ_CP042588.1_3550467_3550752_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP042588.1_3550823_3551501_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP042588.1_3551758_3551950_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP042588.1_3551999_3552524_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_7|NZ_CP042588.1_3552706_3553165_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP042588.1_3553284_3554094_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP042588.1_3554110_3555226_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	9	3690554-3690809	3	PILER-CR	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	CATCAGGCACCGTGCACCGGACGCCGGATGCGGCGTAAACGCCTTATCCGGCCT	54	1	1	3690725-3690788	NZ_CP042588.1_3690810-3690873	NA	2	2	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|326aa|up_2|NZ_CP042588.1_3687161_3688139_-,NA	NA|156aa|up_9|NZ_CP042588.1_3680989_3681457_-	pfam03748, FliL, Flagellar basal body-associated protein FliL	NA|354aa|up_8|NZ_CP042588.1_3681464_3682526_-	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains	NA|104aa|up_7|NZ_CP042588.1_3682522_3682834_-	PRK06064, PRK06064, thiolase domain-containing protein	NA|131aa|up_6|NZ_CP042588.1_3682838_3683231_-	pfam02561, FliS, Flagellar protein FliS	NA|439aa|up_5|NZ_CP042588.1_3683253_3684570_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|305aa|up_4|NZ_CP042588.1_3684860_3685775_-	NF033376, flg_lateral_LafA, lateral flagellin LafA	NA|281aa|up_3|NZ_CP042588.1_3686260_3687103_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|326aa|up_2|NZ_CP042588.1_3687161_3688139_-	NA	NA|310aa|up_1|NZ_CP042588.1_3688155_3689085_-	PRK07192, flgL, flagellar hook-associated protein FlgL; Reviewed	NA|459aa|up_0|NZ_CP042588.1_3689099_3690476_-	PRK07191, flgK, flagellar hook-associated protein FlgK; Validated	NA|100aa|down_0|NZ_CP042588.1_3690897_3691197_-	PRK12708, flgJ, peptidoglycan hydrolase; Reviewed	NA|367aa|down_1|NZ_CP042588.1_3691196_3692297_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|222aa|down_2|NZ_CP042588.1_3692311_3692977_-	PRK12407, flgH, flagellar basal body L-ring protein FlgH	NA|262aa|down_3|NZ_CP042588.1_3693180_3693966_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|246aa|down_4|NZ_CP042588.1_3694044_3694782_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|401aa|down_5|NZ_CP042588.1_3694781_3695984_-	PRK06803, flgE, flagellar basal body protein FlaE	NA|238aa|down_6|NZ_CP042588.1_3696127_3696841_-	PRK09619, flgD, flagellar hook assembly protein FlgD	NA|144aa|down_7|NZ_CP042588.1_3696840_3697272_-	PRK06802, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|112aa|down_8|NZ_CP042588.1_3697274_3697610_-	PRK12685, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|246aa|down_9|NZ_CP042588.1_3697691_3698429_+	PRK06804, flgA, flagellar basal body P-ring formation protein FlgA
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	10	3716619-3716715	9	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Unclear	GCCAGCGTCGCATCAGGCATCCGCGCA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|549aa|up_9|NZ_CP042588.1_3706893_3708540_-	PRK07193, fliF, flagellar MS-ring protein; Reviewed	NA|114aa|up_8|NZ_CP042588.1_3708544_3708886_-	pfam02049, FliE, Flagellar hook-basal body complex protein FliE	NA|329aa|up_7|NZ_CP042588.1_3708900_3709887_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|284aa|up_6|NZ_CP042588.1_3710273_3711125_+	pfam01052, FliMN_C, Type III flagellar switch regulator (C-ring) FliN C-term	NA|124aa|up_5|NZ_CP042588.1_3711117_3711489_+	TIGR02480, Flagellar_motor_switch_protein_FliN, flagellar motor switch protein FliN	NA|251aa|up_4|NZ_CP042588.1_3711485_3712238_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|91aa|up_3|NZ_CP042588.1_3712240_3712513_+	COG1987, FliQ, Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion]	NA|261aa|up_2|NZ_CP042588.1_3712514_3713297_+	COG1684, FliR, Flagellar biosynthesis pathway, component FliR [Cell motility and secretion / Intracellular trafficking and secretion]	NA|380aa|up_1|NZ_CP042588.1_3713286_3714426_+	PRK05702, flhB, flagellar type III secretion system protein FlhB	NA|698aa|up_0|NZ_CP042588.1_3714409_3716503_+	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|166aa|down_0|NZ_CP042588.1_3716718_3717216_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|258aa|down_1|NZ_CP042588.1_3717391_3718165_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|87aa|down_2|NZ_CP042588.1_3718350_3718611_+	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair]	NA|247aa|down_3|NZ_CP042588.1_3719038_3719779_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_4|NZ_CP042588.1_3719749_3720517_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|193aa|down_5|NZ_CP042588.1_3720722_3721301_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|815aa|down_6|NZ_CP042588.1_3721540_3723985_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|158aa|down_7|NZ_CP042588.1_3724027_3724501_-	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|257aa|down_8|NZ_CP042588.1_3724654_3725425_+	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	DEDDh|244aa|down_9|NZ_CP042588.1_3726885_3727617_-	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	11	3833574-3833705	10	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	AATGCAGACTAACCCGCAGATCCAGCAGCGAAGAGA	36	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|309aa|up_9|NZ_CP042588.1_3819686_3820613_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|221aa|up_8|NZ_CP042588.1_3820721_3821384_+	PRK10437, PRK10437, carbonic anhydrase; Provisional	NA|179aa|up_7|NZ_CP042588.1_3821424_3821961_-	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional	NA|797aa|up_6|NZ_CP042588.1_3822166_3824557_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|517aa|up_5|NZ_CP042588.1_3824758_3826309_-	PRK10965, PRK10965, multicopper oxidase; Provisional	NA|116aa|up_4|NZ_CP042588.1_3826474_3826822_+	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS)	NA|289aa|up_3|NZ_CP042588.1_3826927_3827794_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|265aa|up_2|NZ_CP042588.1_3827809_3828604_+	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|121aa|up_1|NZ_CP042588.1_3828641_3829004_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|866aa|up_0|NZ_CP042588.1_3829179_3831777_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|475aa|down_0|NZ_CP042588.1_3834055_3835480_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|631aa|down_1|NZ_CP042588.1_3835804_3837697_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|888aa|down_2|NZ_CP042588.1_3837711_3840375_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|255aa|down_3|NZ_CP042588.1_3840535_3841300_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|457aa|down_4|NZ_CP042588.1_3841843_3843214_+	PRK10238, PRK10238, aromatic amino acid transporter AroP	NA|285aa|down_5|NZ_CP042588.1_3843256_3844111_-	pfam17113, AmpE, Regulatory signalling modulator protein AmpE	NA|184aa|down_6|NZ_CP042588.1_3844107_3844659_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|298aa|down_7|NZ_CP042588.1_3844746_3845640_+	PRK09016, PRK09016, carboxylating nicotinate-nucleotide diphosphorylase	NA|147aa|down_8|NZ_CP042588.1_3845842_3846283_+	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|462aa|down_9|NZ_CP042588.1_3846292_3847678_+	PRK10436, PRK10436, hypothetical protein; Provisional
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	12	3927261-3927402	11	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|96aa|up_9|NZ_CP042588.1_3916252_3916540_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP042588.1_3916536_3917823_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP042588.1_3917873_3918815_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP042588.1_3918829_3919600_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP042588.1_3920072_3921587_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP042588.1_3921617_3922760_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP042588.1_3922888_3924106_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP042588.1_3924179_3925733_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP042588.1_3925841_3926627_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP042588.1_3926632_3927223_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP042588.1_3927431_3927827_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP042588.1_3928088_3931310_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP042588.1_3931327_3932476_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP042588.1_3932931_3933753_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP042588.1_3933919_3934834_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP042588.1_3934899_3935850_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP042588.1_3935851_3936301_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP042588.1_3936425_3936920_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP042588.1_3936919_3939736_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP042588.1_3939778_3940720_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_008823185.1_ASM882318v1	NZ_CP042588	Escherichia coli strain PK6 chromosome, complete genome	13	4118481-4118630	12	CRISPRCasFinder	no		cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|84aa|up_5|NZ_CP042588.1_4111548_4111800_-,NA|77aa|down_6|NZ_CP042588.1_4125770_4126001_-,NA|440aa|down_7|NZ_CP042588.1_4125987_4127307_-	NA|301aa|up_9|NZ_CP042588.1_4107548_4108451_-	pfam09160, FimH_man-bind, FimH, mannose binding	NA|168aa|up_8|NZ_CP042588.1_4108470_4108974_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|110aa|up_7|NZ_CP042588.1_4109527_4109857_-	PRK15193, PRK15193, outer membrane usher protein; Provisional	NA|238aa|up_6|NZ_CP042588.1_4110597_4111311_-	PRK09692, PRK09692, integrase; Provisional	NA|84aa|up_5|NZ_CP042588.1_4111548_4111800_-	NA	NA|340aa|up_4|NZ_CP042588.1_4111713_4112733_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP042588.1_4112862_4114365_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP042588.1_4114483_4115566_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP042588.1_4115565_4116666_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP042588.1_4116932_4118444_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP042588.1_4118797_4119241_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP042588.1_4119240_4122096_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP042588.1_4122149_4123346_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP042588.1_4123538_4124042_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP042588.1_4124087_4124504_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP042588.1_4124665_4125670_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|77aa|down_6|NZ_CP042588.1_4125770_4126001_-	NA	NA|440aa|down_7|NZ_CP042588.1_4125987_4127307_-	NA	NA|151aa|down_8|NZ_CP042588.1_4127429_4127882_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_9|NZ_CP042588.1_4128026_4128620_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_008823185.1_ASM882318v1	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	1	29416-29535	1	CRISPRCasFinder	no			Orphan	TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|65aa|up_8|NZ_CP042589.1_22429_22624_+,NA|28aa|up_7|NZ_CP042589.1_24044_24128_+,NA|94aa|up_4|NZ_CP042589.1_26067_26349_+,NA|326aa|up_3|NZ_CP042589.1_26373_27351_+,NA|119aa|up_2|NZ_CP042589.1_27347_27704_-,NA|77aa|up_0|NZ_CP042589.1_29101_29332_+,NA|66aa|down_6|NZ_CP042589.1_34160_34358_+	NA|989aa|up_9|NZ_CP042589.1_18319_21286_+	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|65aa|up_8|NZ_CP042589.1_22429_22624_+	NA	NA|28aa|up_7|NZ_CP042589.1_24044_24128_+	NA	NA|215aa|up_6|NZ_CP042589.1_24282_24927_-	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|221aa|up_5|NZ_CP042589.1_25307_25970_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|94aa|up_4|NZ_CP042589.1_26067_26349_+	NA	NA|326aa|up_3|NZ_CP042589.1_26373_27351_+	NA	NA|119aa|up_2|NZ_CP042589.1_27347_27704_-	NA	NA|279aa|up_1|NZ_CP042589.1_28326_29163_-	pfam01051, Rep_3, Initiator Replication protein	NA|77aa|up_0|NZ_CP042589.1_29101_29332_+	NA	NA|84aa|down_0|NZ_CP042589.1_30396_30648_+	PRK02854, PRK02854, primosomal protein DnaT	NA|94aa|down_1|NZ_CP042589.1_30637_30919_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|105aa|down_2|NZ_CP042589.1_31731_32046_+	PRK13893, PRK13893, conjugal transfer protein TrbM; Provisional	NA|104aa|down_3|NZ_CP042589.1_32081_32393_+	pfam02601, Exonuc_VII_L, Exonuclease VII, large subunit	NA|157aa|down_4|NZ_CP042589.1_32601_33072_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|308aa|down_5|NZ_CP042589.1_33138_34062_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|66aa|down_6|NZ_CP042589.1_34160_34358_+	NA	NA|478aa|down_7|NZ_CP042589.1_34743_36177_+	PRK10458, PRK10458, DNA cytosine methylase; Provisional	NA|421aa|down_8|NZ_CP042589.1_37015_38278_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|327aa|down_9|NZ_CP042589.1_38484_39465_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]
GCF_008823185.1_ASM882318v1	NZ_CP042590	Escherichia coli strain PK6 plasmid pRHEcCUB-2, complete sequence	1	8271-8369	1	CRISPRCasFinder	no			Orphan	CCATTTTGCTACTTTTTTGCTATC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DEDDh,c2c9_V-U4,DinG,RT	NA|123aa|up_1|NZ_CP042590.1_6734_7103_+,NA|45aa|up_0|NZ_CP042590.1_7532_7667_-,NA|106aa|down_0|NZ_CP042590.1_8850_9168_-,NA|44aa|down_1|NZ_CP042590.1_9550_9682_-,NA|123aa|down_3|NZ_CP042590.1_12120_12489_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|485aa|up_5|NZ_CP042590.1_2359_3814_+	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|95aa|up_4|NZ_CP042590.1_5390_5675_-	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|111aa|up_3|NZ_CP042590.1_5676_6009_-	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system	NA|79aa|up_2|NZ_CP042590.1_6153_6390_-	pfam04899, MbeD_MobD, MbeD/MobD like	NA|123aa|up_1|NZ_CP042590.1_6734_7103_+	NA	NA|45aa|up_0|NZ_CP042590.1_7532_7667_-	NA	NA|106aa|down_0|NZ_CP042590.1_8850_9168_-	NA	NA|44aa|down_1|NZ_CP042590.1_9550_9682_-	NA	NA|425aa|down_2|NZ_CP042590.1_10816_12090_+	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|123aa|down_3|NZ_CP042590.1_12120_12489_+	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
