The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044359	Bacillus amyloliquefaciens strain V417 chromosome, complete genome	3907893	443666	455760	3907893	holin	uncultured_Caudovirales_phage(46.15%)	19	NA	NA
WP_007407257.1|443666_444545_-	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXD7	Bacillus_phage	60.5	3.7e-81
WP_003154813.1|444558_444822_-|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	65.5	2.3e-23
WP_003154815.1|444835_445099_-	protein xhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	63.1	8.8e-23
WP_012117367.1|445150_445912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012117366.1|445968_446166_-	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	63.6	2.5e-14
WP_012117365.1|446170_446542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077411063.1|446554_447022_-	hypothetical protein	NA	A0A1P8CWR7	Bacillus_phage	47.1	2.6e-33
WP_007407280.1|448389_448593_-	hypothetical protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	50.0	1.9e-12
WP_007407281.1|448582_448924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012117361.1|449188_449989_-	ATP-binding protein	NA	A6XMI1	Bacillus_virus	45.5	1.0e-58
WP_007407285.1|450706_450886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003154871.1|451076_451415_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	8.4e-18
WP_007610775.1|451563_452154_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.7	3.0e-39
WP_076423948.1|452061_452283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012117359.1|452272_452878_-	hypothetical protein	NA	A0A0Y0AJU6	Bacillus_phage	47.3	8.8e-42
WP_007610770.1|452988_453366_+	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	41.4	1.5e-15
WP_003154880.1|453403_454357_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A218KC88	Bacillus_phage	69.3	1.1e-62
WP_012117358.1|454499_454634_-	PhrA family phosphatase inhibitor	NA	NA	NA	NA	NA
WP_087920760.1|454623_455760_-	tetratricopeptide repeat protein	NA	A0A1P8CWN8	Bacillus_phage	47.9	1.3e-94
>prophage 2
NZ_CP044359	Bacillus amyloliquefaciens strain V417 chromosome, complete genome	3907893	999266	1007621	3907893		Synechococcus_phage(57.14%)	8	NA	NA
WP_012116999.1|999266_999854_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.8	1.0e-26
WP_012116998.1|999850_1000891_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.4	4.8e-64
WP_007408900.1|1000981_1002412_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	6.2e-54
WP_012116997.1|1002387_1004616_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	2.5e-158
WP_007408898.1|1004599_1005283_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003155758.1|1005279_1005534_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	M4QPE7	Synechococcus_phage	33.3	4.7e-05
WP_012116996.1|1005533_1006253_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	44.7	5.7e-48
WP_007408896.1|1006328_1007621_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	27.3	4.5e-19
>prophage 3
NZ_CP044359	Bacillus amyloliquefaciens strain V417 chromosome, complete genome	3907893	1922443	1966648	3907893	coat,holin,lysis	Bacillus_phage(33.33%)	47	NA	NA
WP_012118753.1|1922443_1923124_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_007407725.1|1923105_1923492_-|holin	CidA/LrgA family holin-like protein	holin	NA	NA	NA	NA
WP_003150908.1|1923598_1924507_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012118752.1|1924509_1925328_+	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
WP_012118751.1|1925324_1925999_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_012118750.1|1926199_1926394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012118749.1|1926412_1927669_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
WP_012118748.1|1927754_1928357_+	DsbA family oxidoreductase	NA	NA	NA	NA	NA
WP_012118747.1|1928377_1929052_-	streptomycin biosynthesis protein StrF	NA	NA	NA	NA	NA
WP_007407718.1|1929051_1929732_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003150917.1|1929948_1930110_-	DNA-binding anti-repressor SinI	NA	NA	NA	NA	NA
WP_151006747.1|1930455_1931070_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041482275.1|1931149_1931536_+	GtrA family protein	NA	NA	NA	NA	NA
WP_007407714.1|1931587_1932772_+	galactokinase	NA	NA	NA	NA	NA
WP_012118745.1|1932761_1934303_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_003150926.1|1934319_1934565_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_012118744.1|1935067_1936033_+	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
WP_012118743.1|1936060_1938010_+	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003150930.1|1938024_1938639_+	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA	NA
WP_007407711.1|1938640_1939009_+	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003150937.1|1939052_1939313_-	spore morphogenesis/germination protein YwcE	NA	NA	NA	NA	NA
WP_012118742.1|1939605_1940064_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_007614568.1|1940265_1941453_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_007407708.1|1941555_1942305_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
WP_012118740.1|1943749_1944751_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_012118739.1|1944792_1947204_-	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	36.8	3.8e-19
WP_012118738.1|1947730_1948045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012118737.1|1948068_1948899_+	transcription antiterminator	NA	NA	NA	NA	NA
WP_007614557.1|1949119_1950502_+	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_007407702.1|1952038_1952278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003150959.1|1952309_1953122_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003150960.1|1953271_1953610_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023357186.1|1953602_1954238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012118734.1|1954282_1954810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012118733.1|1954894_1955701_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_012118732.1|1955715_1956399_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	44.7	3.2e-48
WP_015387535.1|1956458_1956881_+	YwdI family protein	NA	NA	NA	NA	NA
WP_012118730.1|1956899_1958219_+	purine permease	NA	NA	NA	NA	NA
WP_012118729.1|1958282_1958654_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_007407693.1|1958700_1959252_-|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
WP_003150972.1|1959532_1960303_+	glycosyltransferase family 2 protein	NA	A0A0F7L2F7	uncultured_marine_virus	26.3	4.4e-06
WP_012118728.1|1960307_1961732_+	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_012118727.1|1961754_1962924_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_012118726.1|1962924_1963788_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012118725.1|1963787_1964909_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_012118724.1|1964898_1965642_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_012118723.1|1965643_1966648_+|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 4
NZ_CP044359	Bacillus amyloliquefaciens strain V417 chromosome, complete genome	3907893	3341830	3348085	3907893		Staphylococcus_phage(66.67%)	9	NA	NA
WP_012117891.1|3341830_3342946_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.6	2.6e-55
WP_012117890.1|3342926_3343574_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.8	7.4e-39
WP_003153371.1|3343588_3344785_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.9	2.1e-116
WP_003153372.1|3344817_3345282_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	59.3	1.2e-43
WP_003153374.1|3345679_3345895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012117889.1|3345839_3346361_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_003153376.1|3346449_3346539_-	YjcZ family sporulation protein	NA	NA	NA	NA	NA
WP_007409427.1|3346746_3347502_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.7	2.9e-10
WP_007409428.1|3347491_3348085_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	36.6	2.6e-14
