assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008807695.1_ASM880769v1	NZ_CP032352	Pseudomonas protegens strain pf5-k3 chromosome, complete genome	1	668159-668276	1	CRISPRCasFinder	no		PD-DExK,csa3,cas3,DinG,DEDDh,WYL	Orphan	GGGCCCTTTCGCTGGCAAGCCAGCTCCTACGGT	33	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,DinG,DEDDh,WYL	NA|199aa|up_8|NZ_CP032352.1_658770_659367_-,NA|231aa|up_6|NZ_CP032352.1_661396_662089_+,NA|65aa|down_5|NZ_CP032352.1_673310_673505_-,NA|65aa|down_6|NZ_CP032352.1_673492_673687_-,NA|63aa|down_7|NZ_CP032352.1_673583_673772_-	NA|325aa|up_9|NZ_CP032352.1_657509_658484_-	PRK13384, PRK13384, porphobilinogen synthase	NA|199aa|up_8|NZ_CP032352.1_658770_659367_-	NA	NA|235aa|up_7|NZ_CP032352.1_660482_661187_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|231aa|up_6|NZ_CP032352.1_661396_662089_+	NA	NA|430aa|up_5|NZ_CP032352.1_662089_663379_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|249aa|up_4|NZ_CP032352.1_663375_664122_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|219aa|up_3|NZ_CP032352.1_664118_664775_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|257aa|up_2|NZ_CP032352.1_664835_665606_-	cd13530, PBP2_peptides_like, Peptide-binding protein and related homologs; type 2 periplasmic binding protein fold	NA|259aa|up_1|NZ_CP032352.1_665777_666554_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|352aa|up_0|NZ_CP032352.1_667095_668151_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|365aa|down_0|NZ_CP032352.1_668319_669414_-	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional	NA|345aa|down_1|NZ_CP032352.1_669413_670448_-	PRK00943, PRK00943, selenide, water dikinase SelD	NA|122aa|down_2|NZ_CP032352.1_670491_670857_-	pfam14534, DUF4440, Domain of unknown function (DUF4440)	NA|319aa|down_3|NZ_CP032352.1_671155_672112_+	PRK15106, PRK15106, nucleoside-specific channel-forming protein Tsx; Provisional	NA|343aa|down_4|NZ_CP032352.1_672199_673228_+	pfam06516, NUP, Purine nucleoside permease (NUP)	NA|65aa|down_5|NZ_CP032352.1_673310_673505_-	NA	NA|65aa|down_6|NZ_CP032352.1_673492_673687_-	NA	NA|63aa|down_7|NZ_CP032352.1_673583_673772_-	NA	NA|319aa|down_8|NZ_CP032352.1_673787_674744_-	COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]	NA|58aa|down_9|NZ_CP032352.1_674784_674958_-	pfam07235, DUF1427, Protein of unknown function (DUF1427)
GCF_008807695.1_ASM880769v1	NZ_CP032352	Pseudomonas protegens strain pf5-k3 chromosome, complete genome	2	744048-744181	2	CRISPRCasFinder	no		PD-DExK,csa3,cas3,DinG,DEDDh,WYL	Orphan	CCTGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTTGCGGGCCT	43	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,DinG,DEDDh,WYL	NA,NA	NA|220aa|up_9|NZ_CP032352.1_734462_735122_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|79aa|up_8|NZ_CP032352.1_736292_736529_-	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|213aa|up_7|NZ_CP032352.1_736571_737210_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|424aa|up_6|NZ_CP032352.1_737209_738481_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|395aa|up_5|NZ_CP032352.1_738797_739982_+	TIGR03863, PQQ_ABC_bind, ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system	NA|325aa|up_4|NZ_CP032352.1_740012_740987_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|253aa|up_3|NZ_CP032352.1_740983_741742_+	TIGR03864, PQQ_ABC_ATP, ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system	NA|264aa|up_2|NZ_CP032352.1_741738_742530_+	TIGR03861, ABC_efflux_transporter_permease_protein, alcohol ABC transporter, permease protein	NA|181aa|up_1|NZ_CP032352.1_742762_743305_+	TIGR03865, PQQ_CXXCW, PQQ-dependent catabolism-associated CXXCW motif protein	NA|222aa|up_0|NZ_CP032352.1_743359_744025_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|884aa|down_0|NZ_CP032352.1_744214_746866_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|388aa|down_1|NZ_CP032352.1_746795_747959_-	COG3287, COG3287, Uncharacterized conserved protein [Function unknown]	NA|395aa|down_2|NZ_CP032352.1_748489_749674_-	pfam13609, Porin_4, Gram-negative porin	NA|292aa|down_3|NZ_CP032352.1_751059_751935_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|251aa|down_4|NZ_CP032352.1_751951_752704_+	cd13702, PBP2_mlr5654_like, Substrate binding domain of ABC-type histidine/lysine/arginine/ornithine transporter-like; the type 2 periplasmic-binding protein fold	NA|240aa|down_5|NZ_CP032352.1_752790_753510_+	COG4215, ArtQ, ABC-type arginine transport system, permease component [Amino acid transport and metabolism]	NA|237aa|down_6|NZ_CP032352.1_753506_754217_+	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]	NA|414aa|down_7|NZ_CP032352.1_754263_755505_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|242aa|down_8|NZ_CP032352.1_755596_756322_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|1521aa|down_9|NZ_CP032352.1_756643_761206_-	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold
GCF_008807695.1_ASM880769v1	NZ_CP032352	Pseudomonas protegens strain pf5-k3 chromosome, complete genome	3	2501899-2501970	3	CRISPRCasFinder	no		PD-DExK,csa3,cas3,DinG,DEDDh,WYL	Orphan	TTCGCTGGCAAGCCAGCTCCTGC	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,DinG,DEDDh,WYL	NA|156aa|up_5|NZ_CP032352.1_2497886_2498354_+,NA	NA|213aa|up_9|NZ_CP032352.1_2493030_2493669_-	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|304aa|up_8|NZ_CP032352.1_2493806_2494718_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|177aa|up_7|NZ_CP032352.1_2494828_2495359_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|692aa|up_6|NZ_CP032352.1_2495425_2497501_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|156aa|up_5|NZ_CP032352.1_2497886_2498354_+	NA	NA|211aa|up_4|NZ_CP032352.1_2498522_2499155_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|167aa|up_3|NZ_CP032352.1_2499435_2499936_+	PRK13261, ureE, urease accessory protein UreE; Provisional	NA|225aa|up_2|NZ_CP032352.1_2499932_2500607_+	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|205aa|up_1|NZ_CP032352.1_2500616_2501231_+	cd05540, UreG, urease accessory protein UreG	NA|191aa|up_0|NZ_CP032352.1_2501269_2501842_+	pfam04955, HupE_UreJ, HupE / UreJ protein	NA|380aa|down_0|NZ_CP032352.1_2502059_2503199_+	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]	NA|302aa|down_1|NZ_CP032352.1_2503272_2504178_-	COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|256aa|down_2|NZ_CP032352.1_2504425_2505193_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|239aa|down_3|NZ_CP032352.1_2506065_2506782_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|432aa|down_4|NZ_CP032352.1_2507646_2508942_-	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional	NA|305aa|down_5|NZ_CP032352.1_2508944_2509859_-	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH	NA|379aa|down_6|NZ_CP032352.1_2510020_2511157_-	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|428aa|down_7|NZ_CP032352.1_2511521_2512805_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|497aa|down_8|NZ_CP032352.1_2512918_2514409_-	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B	NA|301aa|down_9|NZ_CP032352.1_2514579_2515482_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional
GCF_008807695.1_ASM880769v1	NZ_CP032352	Pseudomonas protegens strain pf5-k3 chromosome, complete genome	4	4895623-4895748	4	CRISPRCasFinder	no		PD-DExK,csa3,cas3,DinG,DEDDh,WYL	Orphan	GTTTTCCACTGAGTTCGGAATCCGAACT	28	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,DinG,DEDDh,WYL	NA|176aa|up_7|NZ_CP032352.1_4884485_4885013_-,NA|66aa|up_3|NZ_CP032352.1_4891024_4891222_-,NA|77aa|down_4|NZ_CP032352.1_4900152_4900383_-,NA|173aa|down_5|NZ_CP032352.1_4900375_4900894_-,NA|91aa|down_7|NZ_CP032352.1_4902414_4902687_-,NA|128aa|down_9|NZ_CP032352.1_4904330_4904714_-	NA|614aa|up_9|NZ_CP032352.1_4881315_4883157_-	TIGR02520, putative_Type_IV_pilus_protein, type IVB pilus formation outer membrane protein, R64 PilN family	NA|382aa|up_8|NZ_CP032352.1_4883153_4884299_-	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family	NA|176aa|up_7|NZ_CP032352.1_4884485_4885013_-	NA	NA|656aa|up_6|NZ_CP032352.1_4885079_4887047_-	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases	NA|627aa|up_5|NZ_CP032352.1_4887043_4888924_-	pfam14284, PcfJ, PcfJ-like protein	NA|639aa|up_4|NZ_CP032352.1_4889013_4890930_-	COG0550, TopA, Topoisomerase IA [DNA replication, recombination, and repair]	NA|66aa|up_3|NZ_CP032352.1_4891024_4891222_-	NA	NA|169aa|up_2|NZ_CP032352.1_4891900_4892407_-	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional	NA|182aa|up_1|NZ_CP032352.1_4892421_4892967_-	pfam11358, DUF3158, Protein of unknown function (DUF3158)	NA|244aa|up_0|NZ_CP032352.1_4892963_4893695_-	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family	NA|209aa|down_0|NZ_CP032352.1_4896464_4897091_-	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|558aa|down_1|NZ_CP032352.1_4897132_4898806_-	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|109aa|down_2|NZ_CP032352.1_4898807_4899134_-	pfam03869, Arc, Arc-like DNA binding domain	NA|334aa|down_3|NZ_CP032352.1_4899151_4900153_-	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated	NA|77aa|down_4|NZ_CP032352.1_4900152_4900383_-	NA	NA|173aa|down_5|NZ_CP032352.1_4900375_4900894_-	NA	NA|450aa|down_6|NZ_CP032352.1_4901068_4902418_-	TIGR00665, DnaB, replicative DNA helicase	NA|91aa|down_7|NZ_CP032352.1_4902414_4902687_-	NA	NA|230aa|down_8|NZ_CP032352.1_4903082_4903772_-	pfam10979, DUF2786, Protein of unknown function (DUF2786)	NA|128aa|down_9|NZ_CP032352.1_4904330_4904714_-	NA
