bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NZ_CP044312	3.1|808435|48|NZ_CP044312|CRISPRCasFinder	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	TTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGA	4089-4136	TTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGG	2	0.9791666666666666	3
NZ_CP044312	3.1|808435|48|NZ_CP044312|CRISPRCasFinder	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	TTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGA	4088-4135	TTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGG	2	0.9791666666666666	3
NZ_CP044312	3.1|808435|48|NZ_CP044312|CRISPRCasFinder	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	TTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGA	4088-4135	TTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGG	2	0.9791666666666666	3
NZ_CP044312	3.1|808435|48|NZ_CP044312|CRISPRCasFinder	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	TTTACGCCGCATCCGGCGGTTATGCGCAGATGCCTGATGCGACGCTGA	4088-4135	TTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGCTGG	2	0.9791666666666666	3
NZ_CP044312	6.2|3713091|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP040723	Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC	35740-35771	CGAGACCGCCTCGCCGAGGCGCTGGCAGCGAC	2	0.75	9
NZ_CP044312	6.2|3713091|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP006991	Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence	GGATCTGCCAGCGCCTCTGCGGGGCGGTAAAC	532343-532374	GGATCGGCCAGCGCATCTGCGGGAGGATGATG	2	0.71875	8
NZ_CP044312	6.3|3713152|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	GTTATCGCCAATCGCGGCGAGATAAATAGATG	190028-190059	AGCACGTTTATCACGCCGCGTTTGGCGATCGC	2	0.71875	10
NZ_CP044312	6.3|3713152|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	GTTATCGCCAATCGCGGCGAGATAAATAGATG	191384-191415	AGCACGTTTATCACGCCGCGTTTGGCGATCGC	2	0.71875	10
NZ_CP044312	6.3|3713152|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	GTTATCGCCAATCGCGGCGAGATAAATAGATG	329763-329794	AGCACGTTTATCACGCCGCGTTTGGCGATCGC	2	0.71875	10
NZ_CP044312	6.3|3713152|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	GTTATCGCCAATCGCGGCGAGATAAATAGATG	796218-796249	GGGATCGCCAAACGCGGCGTGATAAACGTGCT	2	0.71875	10
NZ_CP044312	6.3|3713152|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	GTTATCGCCAATCGCGGCGAGATAAATAGATG	177984-178015	AGCACGTTTATCACGCCGCGTTTGGCGATCGC	2	0.71875	10
NZ_CP044312	6.3|3713152|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	GTTATCGCCAATCGCGGCGAGATAAATAGATG	190516-190547	AGCACGTTTATCACGCCGCGTTTGGCGATCGC	2	0.71875	10
NZ_CP044312	6.6|3713335|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP025810	Sulfitobacter sp. SK025 plasmid unnamed2, complete sequence	GTCATCTGACGCAAAATCTGGTGCCGCCAAAT	89235-89266	TCGATCTGACGCAAAAACTGCTGCCGCTGCTC	2	0.75	10
NZ_CP044312	6.6|3713335|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NC_019364	Sulfitobacter guttiformis plasmid pSD118, complete sequence	GTCATCTGACGCAAAATCTGGTGCCGCCAAAT	38310-38341	TCGATCTGACGCAAAAACTGTTGCCGATGCTG	2	0.71875	11
NZ_CP044312	6.7|3713396|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP034185	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed1, complete sequence	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG	17977-18008	AGCGTCACCGACGCGCAGGGCCGCTACCAACT	2	0.8125	8
NZ_CP044312	6.7|3713396|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP017753	Cupriavidus sp. USMAHM13 plasmid unnamed1, complete sequence	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG	97497-97528	TTGAAGAAGCGCGACTGCGCGTCGGTGACGTC	1	0.71875	8
NZ_CP044312	6.7|3713396|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG	405875-405906	GACGTCACTGACGCGCAGTCGCGCTTCTTCAA	2	0.71875	9
NZ_CP044312	6.7|3713396|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	TCACGGTAGCGCCACTGCGCGTCGGTGACGGG	2248362-2248393	GGGACGTCGCGCCACTGGGCGTCGGTGATGTC	2	0.71875	10
NZ_CP044312	6.9|3713518|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	ATAATTCGCAAATCAATATATATTTTGTCCGT	244686-244717	TGAGGCAAAATATAGATTGATTTCCGAAAATA	2	0.71875	10
NZ_CP044312	6.9|3713518|32|NZ_CP044312|PILER-CR,CRISPRCasFinder,CRT	GU075905	Prochlorococcus phage P-HM2, complete genome	ATAATTCGCAAATCAATATATATTTTGTCCGT	78536-78567	ACGGAAAAATTATATATTGATTTTACTTCTGG	2	0.71875	10
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	45716-45747	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	45716-45747	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NC_018995	Escherichia coli plasmid pHUSEC41-1, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	29015-29046	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_CP053235	Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	78292-78323	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	39563-39594	TGGCCCTGCCTGCAGCTCAGCCCTGGATAACG	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	KU932021	Escherichia coli plasmid pEC3I, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51902-51933	TGGCCCTGCCTGCAGCTCAGCCCTGGATAACG	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_CP024154	Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	18560-18591	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	49240-49271	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	81434-81465	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_LR213460	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	28916-28947	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	36182-36213	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.2|3739367|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_MH618673	Escherichia coli strain 838B plasmid p838B-R, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	32230-32261	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.3|3739428|32|NZ_CP044312|CRISPRCasFinder,CRT	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	TGGTTCACTCACGCAACGTCTGAGCGCGTTGA	1417960-1417991	CGGGGTAATCACGCAACGTCCGACCGCGTTGT	2	0.71875	8
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	45716-45747	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	45716-45747	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51276-51307	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NC_018995	Escherichia coli plasmid pHUSEC41-1, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	29015-29046	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_CP053235	Escherichia coli strain SCU-106 plasmid pSCU-106-1, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	78292-78323	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	39563-39594	TGGCCCTGCCTGCAGCTCAGCCCTGGATAACG	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	KU932021	Escherichia coli plasmid pEC3I, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	51902-51933	TGGCCCTGCCTGCAGCTCAGCCCTGGATAACG	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_CP024154	Escherichia coli strain 14EC033 plasmid p14EC033g, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	18560-18591	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	49240-49271	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	81434-81465	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_LR213460	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 3	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	28916-28947	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	36182-36213	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.7|3739368|32|NZ_CP044312|PILER-CR	NZ_MH618673	Escherichia coli strain 838B plasmid p838B-R, complete sequence	GCCGTCTGCCTCCAGCCCAGCCCTGGATATTT	32230-32261	CGTTATCCAGGGCTGAGCTGCAGGCAGGGCCA	2	0.75	7
NZ_CP044312	7.8|3739429|32|NZ_CP044312|PILER-CR	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	TGGTTCACTCACGCAACGTCTGAGCGCGTTGA	1417960-1417991	CGGGGTAATCACGCAACGTCCGACCGCGTTGT	2	0.71875	8
NZ_CP044312	8.1|4328857|42|NZ_CP044312|CRISPRCasFinder	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	ACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGT	24786-24827	TTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAC	2	0.8095238095238095	9
NZ_CP044312	8.1|4328857|42|NZ_CP044312|CRISPRCasFinder	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	ACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGT	24899-24940	TTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAT	2	0.8095238095238095	8
NZ_CP044312	8.1|4328857|42|NZ_CP044312|CRISPRCasFinder	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	ACGTAGGTCAGATAAGGTGTTTACGCCGCATCCGACTGCTGT	30214-30255	ACAAATGCCGGATGCGGCGTAAACGCCTTATCTGGCCTACGC	2	0.7857142857142857	7
