The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042582	Rhodospirillaceae bacterium R5959 chromosome, complete genome	5865246	1337331	1399226	5865246	tRNA,protease,transposase	Streptococcus_phage(10.0%)	51	NA	NA
WP_151120677.1|1337331_1338255_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_151115674.1|1338420_1339920_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.2	5.8e-18
WP_151115676.1|1340193_1341360_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_151115678.1|1341570_1342656_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	56.2	2.5e-23
WP_151120710.1|1342714_1343665_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_151115680.1|1343661_1344537_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_151115682.1|1344816_1346127_+	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_151115684.1|1346322_1347099_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_151115686.1|1347126_1348038_+	DMT family transporter	NA	NA	NA	NA	NA
WP_151115688.1|1348093_1349500_+	FAD-binding protein	NA	NA	NA	NA	NA
WP_151115690.1|1349639_1350872_+	pimeloyl-CoA dehydrogenase large subunit	NA	NA	NA	NA	NA
WP_151115692.1|1350874_1352008_+	pimeloyl-CoA dehydrogenase small subunit	NA	NA	NA	NA	NA
WP_151115694.1|1352048_1352861_+	carnitinyl-CoA dehydratase	NA	NA	NA	NA	NA
WP_151115695.1|1352914_1353142_-	DUF4169 family protein	NA	NA	NA	NA	NA
WP_151115697.1|1353291_1357524_+	AsmA family protein	NA	NA	NA	NA	NA
WP_151115699.1|1357626_1357824_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_151120711.1|1357861_1359343_+	multicopper oxidase family protein	NA	NA	NA	NA	NA
WP_151115701.1|1359335_1359587_-	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_151115703.1|1359601_1360996_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_151115705.1|1361219_1361618_-	TfoX/Sxy family protein	NA	NA	NA	NA	NA
WP_151115707.1|1361614_1362472_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_151115709.1|1362468_1363530_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_151115711.1|1363548_1364049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151115713.1|1364590_1365532_+	FAD-dependent thymidylate synthase	NA	M4QT16	Loktanella_phage	56.6	5.5e-91
WP_151115715.1|1365609_1366293_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_151120712.1|1366339_1367449_-	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	49.0	2.4e-85
WP_151115716.1|1367704_1368868_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_151115718.1|1369014_1370172_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_151115720.1|1370168_1371059_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_151115722.1|1371126_1371312_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_151115723.1|1371352_1372990_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.3	4.0e-20
WP_151115725.1|1373043_1374057_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_151115727.1|1374217_1375984_+	acetolactate synthase 3 large subunit	NA	G8DDL3	Micromonas_pusilla_virus	30.6	5.5e-52
WP_151115728.1|1375989_1376502_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_151115730.1|1376631_1377651_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_151115732.1|1377790_1378732_+|transposase	IS630 family transposase	transposase	A0A1V0SDF8	Indivirus	23.6	1.9e-14
WP_151115734.1|1378881_1380027_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_151115736.1|1380559_1382113_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	38.5	4.0e-06
WP_151115739.1|1382207_1383248_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_151115741.1|1383360_1384278_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_151115742.1|1384348_1384867_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_151120713.1|1384889_1386794_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_151115744.1|1386790_1387966_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_151115746.1|1388018_1388867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151115748.1|1389306_1390050_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.9	3.6e-29
WP_151115750.1|1390069_1391185_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_151120714.1|1391471_1392239_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_151115752.1|1393020_1393575_+	VOC family protein	NA	NA	NA	NA	NA
WP_151115754.1|1393721_1396325_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151115756.1|1396337_1398032_-	pyruvate, phosphate dikinase	NA	H8YJB7	Vibrio_phage	38.1	1.3e-71
WP_151114687.1|1398275_1399226_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP042582	Rhodospirillaceae bacterium R5959 chromosome, complete genome	5865246	1775189	1831334	5865246	transposase,protease,holin	Catovirus(22.22%)	47	NA	NA
WP_151116257.1|1775189_1776797_+|holin	choline dehydrogenase	holin	A0A1V0S9J5	Catovirus	28.8	3.2e-46
WP_151120741.1|1777121_1779233_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.8	1.1e-33
WP_151116259.1|1779305_1780538_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_151116261.1|1780696_1781641_-	DMT family transporter	NA	NA	NA	NA	NA
WP_151120742.1|1781763_1782480_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_151116263.1|1782581_1783058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151120743.1|1783080_1784004_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_151116265.1|1784141_1785134_-	alpha/beta hydrolase	NA	A0A2R4AP45	Mycobacterium_phage	29.5	2.1e-16
WP_151116267.1|1785278_1786181_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_151116269.1|1786263_1787211_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_151116271.1|1787223_1789269_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A218MLZ2	uncultured_virus	34.2	6.4e-36
WP_151116273.1|1789308_1790097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151116275.1|1790415_1791288_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_151116278.1|1791468_1792605_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
WP_151116280.1|1792638_1793901_+	phosphonoacetate hydrolase	NA	NA	NA	NA	NA
WP_151116282.1|1793927_1795367_+	phosphonoacetaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_151116284.1|1795572_1798014_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_151115166.1|1798245_1799205_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	32.4	3.7e-18
WP_151116286.1|1799338_1800472_+	DUF971 domain-containing protein	NA	NA	NA	NA	NA
WP_151116288.1|1800468_1801023_+	HD domain-containing protein	NA	A0A2K9L4U0	Tupanvirus	33.3	9.2e-22
WP_151116290.1|1801151_1802324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_151116292.1|1802451_1802934_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_151116293.1|1803180_1805133_-	PhoX family phosphatase	NA	NA	NA	NA	NA
WP_151116296.1|1805408_1806848_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0CPD8	Kaumoebavirus	31.5	1.6e-49
WP_151120744.1|1806875_1807559_-	ligase-associated DNA damage response endonuclease PdeM	NA	NA	NA	NA	NA
WP_151120745.1|1807570_1810018_-	ligase-associated DNA damage response DEXH box helicase	NA	NA	NA	NA	NA
WP_151116298.1|1810081_1810852_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_151116300.1|1811019_1811451_-	HIT family protein	NA	NA	NA	NA	NA
WP_151116311.1|1811490_1812747_+	MFS transporter	NA	NA	NA	NA	NA
WP_151116313.1|1812852_1813875_+	adenosine deaminase	NA	NA	NA	NA	NA
WP_151120746.1|1813858_1814203_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_151116315.1|1814454_1816116_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	30.7	1.2e-56
WP_151116317.1|1816267_1817299_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_151116319.1|1817295_1817907_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_151116321.1|1817916_1818696_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_151116323.1|1818544_1819948_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_151116325.1|1819971_1820799_+	creatininase family protein	NA	NA	NA	NA	NA
WP_151116327.1|1820877_1821768_+	pirin family protein	NA	NA	NA	NA	NA
WP_151116329.1|1821778_1822384_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_151116331.1|1822591_1824085_-	glycine cleavage system protein T	NA	NA	NA	NA	NA
WP_151116333.1|1824114_1824507_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_151120747.1|1824700_1824967_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_151120748.1|1826009_1827059_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_151116335.1|1827131_1827995_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_151116337.1|1828055_1828973_+	DMT family transporter	NA	NA	NA	NA	NA
WP_151116339.1|1829215_1830193_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_151116341.1|1830269_1831334_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	G9BWD6	Planktothrix_phage	39.5	1.7e-24
>prophage 3
NZ_CP042582	Rhodospirillaceae bacterium R5959 chromosome, complete genome	5865246	2336187	2347149	5865246	tRNA	uncultured_Mediterranean_phage(77.78%)	12	NA	NA
WP_151117196.1|2336187_2336994_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.3	6.4e-32
WP_151117198.1|2336990_2337992_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	50.9	9.1e-44
WP_151117200.1|2338308_2338524_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_151117201.1|2338566_2339112_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_151117202.1|2339115_2339946_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	47.1	8.1e-54
WP_151117204.1|2340079_2341360_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.8	7.7e-104
WP_151117205.1|2341379_2342168_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.9	4.4e-41
WP_151117207.1|2342268_2342988_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	7.5e-32
WP_151117209.1|2343103_2344231_+	LysM peptidoglycan-binding domain-containing M23 family metallopeptidase	NA	Q8SBN9	Clostridium_phage	41.9	1.3e-17
WP_151117211.1|2344340_2345546_-	methionine gamma-lyase	NA	A0A0B5JD48	Pandoravirus	29.5	9.4e-19
WP_151117213.1|2345660_2346518_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_151117215.1|2346774_2347149_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	56.3	6.9e-13
>prophage 4
NZ_CP042582	Rhodospirillaceae bacterium R5959 chromosome, complete genome	5865246	3478989	3486634	5865246		Prochlorococcus_phage(16.67%)	8	NA	NA
WP_151118558.1|3478989_3480159_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.5	1.1e-56
WP_151118559.1|3480146_3480800_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.9	4.1e-29
WP_151118560.1|3480911_3481037_+	aa3-type cytochrome c oxidase subunit IV	NA	NA	NA	NA	NA
WP_151118561.1|3481132_3481555_-	nucleoside-diphosphate kinase	NA	L7Y4C4	Megavirus	42.0	4.6e-21
WP_151118562.1|3481808_3483704_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	34.5	3.6e-81
WP_151118563.1|3483759_3484614_-	FkbM family methyltransferase	NA	A0A218MM68	uncultured_virus	30.7	1.3e-14
WP_151118564.1|3484610_3485066_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_151118565.1|3485134_3486634_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	39.2	3.8e-54
>prophage 5
NZ_CP042582	Rhodospirillaceae bacterium R5959 chromosome, complete genome	5865246	5854783	5862564	5865246		Catovirus(16.67%)	8	NA	NA
WP_151120586.1|5854783_5855542_-	molybdopterin-synthase adenylyltransferase MoeB	NA	A0A1V0SAV8	Catovirus	30.3	2.0e-11
WP_151120587.1|5855733_5856723_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	51.8	1.5e-78
WP_151120588.1|5856803_5857259_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_151120589.1|5857279_5857762_-	dUTP diphosphatase	NA	A0A2R8FDW2	Brazilian_cedratvirus	64.4	3.2e-39
WP_151120590.1|5857758_5858967_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.7	1.1e-32
WP_151120591.1|5859182_5860739_-	2-polyprenylphenol 6-hydroxylase	NA	H8ZJ56	Ostreococcus_tauri_virus	27.8	8.9e-30
WP_151120592.1|5860766_5861630_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_151120593.1|5861721_5862564_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	35.2	2.6e-23
