assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008728455.1_ASM872845v1	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	1	123734-123903	1	PILER-CR	no	c2c10_CAS-V-U3	RT,csa3,c2c10_CAS-V-U3	Type V-U3	AGTTTGTTTTAGAACCATATAAAACAGCATGTTTCTCAAAT	41	0	0	NA	NA	NA	2	2	TypeV-U3	DinG,csa3,cas3,cas14j,RT,DEDDh,cas2,c2c10_CAS-V-U3	NA|86aa|up_9|NZ_CP044266.1_115702_115960_+,NA|118aa|up_8|NZ_CP044266.1_116061_116415_+,NA|265aa|up_7|NZ_CP044266.1_116467_117262_+,NA|373aa|up_6|NZ_CP044266.1_117290_118409_+,NA|107aa|up_5|NZ_CP044266.1_118441_118762_+,NA|230aa|up_4|NZ_CP044266.1_119016_119706_+,NA|124aa|up_2|NZ_CP044266.1_121608_121980_+,NA|67aa|up_1|NZ_CP044266.1_122064_122265_+,c2c10_CAS-V-U3|409aa|up_0|NZ_CP044266.1_122398_123625_+,NA|116aa|down_1|NZ_CP044266.1_126743_127091_+,NA|61aa|down_2|NZ_CP044266.1_127087_127270_+,NA|182aa|down_6|NZ_CP044266.1_130525_131071_+,NA|189aa|down_7|NZ_CP044266.1_131071_131638_+,NA|83aa|down_8|NZ_CP044266.1_131652_131901_+	NA|86aa|up_9|NZ_CP044266.1_115702_115960_+	NA	NA|118aa|up_8|NZ_CP044266.1_116061_116415_+	NA	NA|265aa|up_7|NZ_CP044266.1_116467_117262_+	NA	NA|373aa|up_6|NZ_CP044266.1_117290_118409_+	NA	NA|107aa|up_5|NZ_CP044266.1_118441_118762_+	NA	NA|230aa|up_4|NZ_CP044266.1_119016_119706_+	NA	NA|543aa|up_3|NZ_CP044266.1_119929_121558_+	pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein	NA|124aa|up_2|NZ_CP044266.1_121608_121980_+	NA	NA|67aa|up_1|NZ_CP044266.1_122064_122265_+	NA	c2c10_CAS-V-U3|409aa|up_0|NZ_CP044266.1_122398_123625_+	NA	NA|171aa|down_0|NZ_CP044266.1_124760_125273_+	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|116aa|down_1|NZ_CP044266.1_126743_127091_+	NA	NA|61aa|down_2|NZ_CP044266.1_127087_127270_+	NA	NA|274aa|down_3|NZ_CP044266.1_127441_128263_+	pfam18144, SMODS, Second Messenger Oligonucleotide or Dinucleotide Synthetase domain	NA|187aa|down_4|NZ_CP044266.1_128282_128843_+	pfam18186, SLATT_4, SMODS and SLOG-associating 2TM effector domain family 4	NA|256aa|down_5|NZ_CP044266.1_129732_130500_+	cd08071, MPN_DUF2466, Mov34/MPN/PAD-1 family	NA|182aa|down_6|NZ_CP044266.1_130525_131071_+	NA	NA|189aa|down_7|NZ_CP044266.1_131071_131638_+	NA	NA|83aa|down_8|NZ_CP044266.1_131652_131901_+	NA	NA|80aa|down_9|NZ_CP044266.1_131919_132159_+	pfam02787, CPSase_L_D3, Carbamoyl-phosphate synthetase large chain, oligomerization domain
GCF_008728455.1_ASM872845v1	NZ_CP044264	Enterococcus faecium strain V1836 chromosome, complete genome	1	546593-546702	1	CRISPRCasFinder	no		DinG,csa3,cas3,cas14j,RT,DEDDh,cas2	Orphan	CTTTGCTCAACCAGTATTATTCATCA	26	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,cas3,cas14j,RT,DEDDh,cas2,c2c10_CAS-V-U3	NA,NA	NA|720aa|up_9|NZ_CP044264.1_535180_537340_+	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|322aa|up_8|NZ_CP044264.1_537389_538355_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|380aa|up_7|NZ_CP044264.1_538443_539583_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|238aa|up_6|NZ_CP044264.1_539891_540605_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|234aa|up_5|NZ_CP044264.1_540858_541560_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|511aa|up_4|NZ_CP044264.1_541793_543326_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|401aa|up_3|NZ_CP044264.1_543516_544719_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|230aa|up_2|NZ_CP044264.1_544800_545490_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|123aa|up_1|NZ_CP044264.1_545595_545964_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_0|NZ_CP044264.1_546016_546520_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|230aa|down_0|NZ_CP044264.1_546929_547619_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|141aa|down_1|NZ_CP044264.1_547722_548145_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|223aa|down_2|NZ_CP044264.1_548487_549156_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|down_3|NZ_CP044264.1_549168_550041_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|340aa|down_4|NZ_CP044264.1_550131_551151_-	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|296aa|down_5|NZ_CP044264.1_551323_552211_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|182aa|down_6|NZ_CP044264.1_552287_552833_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|57aa|down_7|NZ_CP044264.1_552933_553104_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|51aa|down_8|NZ_CP044264.1_553127_553280_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|215aa|down_9|NZ_CP044264.1_553441_554086_+	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
GCF_008728455.1_ASM872845v1	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	1	430-557	1	CRISPRCasFinder	no		cas14j	Orphan	TCAGAGGGTATGAAAATCATACC	23	0	0	NA	NA	NA	2	2	Orphan	DinG,csa3,cas3,cas14j,RT,DEDDh,cas2,c2c10_CAS-V-U3	NA,NA|111aa|down_0|NZ_CP044265.1_1881_2214_+,NA|97aa|down_2|NZ_CP044265.1_3192_3483_+,NA|78aa|down_3|NZ_CP044265.1_3674_3908_+,NA|254aa|down_7|NZ_CP044265.1_7799_8561_+,NA|87aa|down_8|NZ_CP044265.1_8573_8834_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|111aa|down_0|NZ_CP044265.1_1881_2214_+	NA	NA|114aa|down_1|NZ_CP044265.1_2832_3174_+	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|97aa|down_2|NZ_CP044265.1_3192_3483_+	NA	NA|78aa|down_3|NZ_CP044265.1_3674_3908_+	NA	NA|224aa|down_4|NZ_CP044265.1_4313_4985_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|660aa|down_5|NZ_CP044265.1_5037_7017_+	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|251aa|down_6|NZ_CP044265.1_7031_7784_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|254aa|down_7|NZ_CP044265.1_7799_8561_+	NA	NA|87aa|down_8|NZ_CP044265.1_8573_8834_+	NA	NA|697aa|down_9|NZ_CP044265.1_8830_10921_+	pfam17998, AgI_II_C2, Cell surface antigen I/II C2 terminal domain
GCF_008728455.1_ASM872845v1	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	2	160372-160482	2	CRISPRCasFinder	no		cas14j	Orphan	ACAACTCATCAGTCCTTATTGACAAAGAGCC	31	1	6	160403-160451|160403-160451|160403-160451|160403-160451|160403-160451|160403-160451	NZ_CP044264.1_1269935-1269887|NZ_CP044264.1_1274914-1274866|NZ_CP044264.1_1384666-1384618|NZ_CP044264.1_93011-93059|NZ_CP044264.1_372328-372376|NZ_CP044264.1_953332-953380	NA	1	1	Orphan	DinG,csa3,cas3,cas14j,RT,DEDDh,cas2,c2c10_CAS-V-U3	NA,NA	NA|554aa|up_9|NZ_CP044265.1_144009_145671_-	pfam07555, NAGidase, beta-N-acetylglucosaminidase	NA|994aa|up_8|NZ_CP044265.1_145667_148649_-	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|638aa|up_7|NZ_CP044265.1_148776_150690_-	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins	NA|204aa|up_6|NZ_CP044265.1_150719_151331_-	COG5578, COG5578, Predicted integral membrane protein [Function unknown]	NA|491aa|up_5|NZ_CP044265.1_151381_152854_-	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|304aa|up_4|NZ_CP044265.1_152877_153789_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|313aa|up_3|NZ_CP044265.1_153800_154739_-	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|525aa|up_2|NZ_CP044265.1_154967_156542_+	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|243aa|up_1|NZ_CP044265.1_156519_157248_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|425aa|up_0|NZ_CP044265.1_157630_158905_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|112aa|down_0|NZ_CP044265.1_160498_160834_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_1|NZ_CP044265.1_160817_161090_-	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family	NA|268aa|down_2|NZ_CP044265.1_161540_162344_-	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	NA|375aa|down_3|NZ_CP044265.1_162321_163446_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|272aa|down_4|NZ_CP044265.1_163461_164277_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|294aa|down_5|NZ_CP044265.1_164266_165148_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|430aa|down_6|NZ_CP044265.1_165223_166513_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|499aa|down_7|NZ_CP044265.1_167861_169358_-	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|400aa|down_8|NZ_CP044265.1_169329_170529_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|459aa|down_9|NZ_CP044265.1_170658_172035_-	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]
