assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008728335.1_ASM872833v1	NZ_CP038222	Burkholderia pseudomallei strain Yap3a chromosome 1, complete sequence	1	1990571-1990726	1	CRT	no		RT,csa3,DEDDh,cas3,WYL,DinG	Orphan	CGGCGGCGGTGGCGGCGG	18	1	1	1990637-1990654	NZ_CP038223.1_754504-754487	NA	3	3	Orphan	RT,csa3,DEDDh,cas3,WYL,DinG	NA|46aa|up_7|NZ_CP038222.1_1981738_1981876_-,NA|38aa|up_2|NZ_CP038222.1_1985728_1985842_-,NA|80aa|down_1|NZ_CP038222.1_1991686_1991926_-,NA|84aa|down_3|NZ_CP038222.1_1993745_1993997_-,NA|106aa|down_4|NZ_CP038222.1_1994169_1994487_-,NA|74aa|down_7|NZ_CP038222.1_1997361_1997583_-	NA|670aa|up_9|NZ_CP038222.1_1979112_1981122_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|188aa|up_8|NZ_CP038222.1_1981205_1981769_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|46aa|up_7|NZ_CP038222.1_1981738_1981876_-	NA	NA|205aa|up_6|NZ_CP038222.1_1981862_1982477_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|286aa|up_5|NZ_CP038222.1_1982489_1983347_+	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|294aa|up_4|NZ_CP038222.1_1983398_1984280_+	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|345aa|up_3|NZ_CP038222.1_1984543_1985578_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|38aa|up_2|NZ_CP038222.1_1985728_1985842_-	NA	NA|956aa|up_1|NZ_CP038222.1_1985847_1988715_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|396aa|up_0|NZ_CP038222.1_1988928_1990116_+	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|244aa|down_0|NZ_CP038222.1_1990901_1991633_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|80aa|down_1|NZ_CP038222.1_1991686_1991926_-	NA	NA|527aa|down_2|NZ_CP038222.1_1991976_1993557_+	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain	NA|84aa|down_3|NZ_CP038222.1_1993745_1993997_-	NA	NA|106aa|down_4|NZ_CP038222.1_1994169_1994487_-	NA	NA|589aa|down_5|NZ_CP038222.1_1994941_1996708_-	pfam03235, DUF262, Protein of unknown function DUF262	NA|117aa|down_6|NZ_CP038222.1_1996959_1997310_-	pfam02627, CMD, Carboxymuconolactone decarboxylase family	NA|74aa|down_7|NZ_CP038222.1_1997361_1997583_-	NA	NA|2028aa|down_8|NZ_CP038222.1_1997579_2003663_-	pfam03534, SpvB, Salmonella virulence plasmid 65kDa B protein	NA|1089aa|down_9|NZ_CP038222.1_2003684_2006951_-	pfam18276, TcA_TcB_BD, Tc toxin complex TcA C-terminal TcB-binding domain
GCF_008728335.1_ASM872833v1	NZ_CP038222	Burkholderia pseudomallei strain Yap3a chromosome 1, complete sequence	2	2463455-2463788	1	CRISPRCasFinder	no		RT,csa3,DEDDh,cas3,WYL,DinG	Orphan	CGGACGAGGCGGACGAGGCGGACGAGGC	28	2	6	2463699-2463715|2463744-2463760|2463744-2463760|2463744-2463760|2463744-2463760|2463744-2463760	NZ_CP038222.1_321129-321113|NZ_CP038222.1_2463780-2463796|NZ_CP038222.1_2463789-2463805|NZ_CP038223.1_1265929-1265913|NZ_CP038223.1_1265938-1265922|NZ_CP038223.1_1265920-1265904	NA	5	5	Orphan	RT,csa3,DEDDh,cas3,WYL,DinG	NA,NA|71aa|down_3|NZ_CP038222.1_2466890_2467103_-,NA|77aa|down_6|NZ_CP038222.1_2468962_2469193_+,NA|60aa|down_8|NZ_CP038222.1_2472367_2472547_+	NA|338aa|up_9|NZ_CP038222.1_2448183_2449197_+	pfam00891, Methyltransf_2, O-methyltransferase	NA|726aa|up_8|NZ_CP038222.1_2449552_2451730_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|216aa|up_7|NZ_CP038222.1_2452211_2452859_-	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]	NA|363aa|up_6|NZ_CP038222.1_2453240_2454329_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|180aa|up_5|NZ_CP038222.1_2454461_2455001_+	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)	NA|190aa|up_4|NZ_CP038222.1_2455104_2455674_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|760aa|up_3|NZ_CP038222.1_2455776_2458056_+	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]	NA|241aa|up_2|NZ_CP038222.1_2458058_2458781_+	pfam07007, LprI, Lysozyme inhibitor LprI	NA|225aa|up_1|NZ_CP038222.1_2458914_2459589_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|470aa|up_0|NZ_CP038222.1_2459621_2461031_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|237aa|down_0|NZ_CP038222.1_2464305_2465016_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|173aa|down_1|NZ_CP038222.1_2465023_2465542_-	COG5430, COG5430, Uncharacterized secreted protein [Function unknown]	NA|330aa|down_2|NZ_CP038222.1_2465937_2466927_+	pfam05229, SCPU, Spore Coat Protein U domain	NA|71aa|down_3|NZ_CP038222.1_2466890_2467103_-	NA	NA|272aa|down_4|NZ_CP038222.1_2467099_2467915_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|252aa|down_5|NZ_CP038222.1_2468097_2468853_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|77aa|down_6|NZ_CP038222.1_2468962_2469193_+	NA	NA|995aa|down_7|NZ_CP038222.1_2469270_2472255_-	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|60aa|down_8|NZ_CP038222.1_2472367_2472547_+	NA	NA|330aa|down_9|NZ_CP038222.1_2472581_2473571_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed
GCF_008728335.1_ASM872833v1	NZ_CP038222	Burkholderia pseudomallei strain Yap3a chromosome 1, complete sequence	3	2789334-2789475	2	CRISPRCasFinder	no		RT,csa3,DEDDh,cas3,WYL,DinG	Orphan	CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCGGCGG	46	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,cas3,WYL,DinG	NA|60aa|up_9|NZ_CP038222.1_2772056_2772236_+,NA|64aa|up_7|NZ_CP038222.1_2773748_2773940_-,NA|75aa|down_0|NZ_CP038222.1_2790901_2791126_-,NA|67aa|down_7|NZ_CP038222.1_2797651_2797852_+,NA|70aa|down_8|NZ_CP038222.1_2797848_2798058_-	NA|60aa|up_9|NZ_CP038222.1_2772056_2772236_+	NA	NA|455aa|up_8|NZ_CP038222.1_2772387_2773752_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|64aa|up_7|NZ_CP038222.1_2773748_2773940_-	NA	NA|759aa|up_6|NZ_CP038222.1_2773936_2776213_-	pfam12805, FUSC-like, FUSC-like inner membrane protein yccS	NA|168aa|up_5|NZ_CP038222.1_2776269_2776773_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|1115aa|up_4|NZ_CP038222.1_2776781_2780126_+	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|1271aa|up_3|NZ_CP038222.1_2780122_2783935_+	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|899aa|up_2|NZ_CP038222.1_2783931_2786628_+	PRK10875, recD, exodeoxyribonuclease V subunit alpha	NA|135aa|up_1|NZ_CP038222.1_2786624_2787029_+	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|404aa|up_0|NZ_CP038222.1_2787450_2788662_-	cd01948, EAL, EAL domain	NA|75aa|down_0|NZ_CP038222.1_2790901_2791126_-	NA	NA|71aa|down_1|NZ_CP038222.1_2791377_2791590_-	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB	NA|644aa|down_2|NZ_CP038222.1_2791813_2793745_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|102aa|down_3|NZ_CP038222.1_2794384_2794690_+	TIGR02953, conserved_hypothetical_protein, pentapeptide MXKDX repeat protein	NA|275aa|down_4|NZ_CP038222.1_2794850_2795675_+	pfam06764, DUF1223, Protein of unknown function (DUF1223)	NA|366aa|down_5|NZ_CP038222.1_2795716_2796814_+	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|264aa|down_6|NZ_CP038222.1_2796829_2797621_+	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|67aa|down_7|NZ_CP038222.1_2797651_2797852_+	NA	NA|70aa|down_8|NZ_CP038222.1_2797848_2798058_-	NA	NA|312aa|down_9|NZ_CP038222.1_2798074_2799010_+	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional
GCF_008728335.1_ASM872833v1	NZ_CP038223	Burkholderia pseudomallei strain Yap3a chromosome 2, complete sequence	1	373320-373434	1	CRISPRCasFinder	no		csa3,DinG,cas3	Orphan	TGCGTAGCCTGCGTAGCCTGCGTAG	25	1	1	373390-373409	NZ_CP038223.1_373417-373436	NA	2	2	Orphan	RT,csa3,DEDDh,cas3,WYL,DinG	NA|88aa|up_8|NZ_CP038223.1_337223_337487_+,NA|64aa|up_4|NZ_CP038223.1_341571_341763_-,NA|45aa|down_1|NZ_CP038223.1_396373_396508_+,NA|79aa|down_4|NZ_CP038223.1_399684_399921_-,NA|68aa|down_6|NZ_CP038223.1_401670_401874_-,NA|113aa|down_7|NZ_CP038223.1_402126_402465_+	NA|324aa|up_9|NZ_CP038223.1_336231_337203_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|88aa|up_8|NZ_CP038223.1_337223_337487_+	NA	NA|398aa|up_7|NZ_CP038223.1_337548_338742_+	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]	NA|138aa|up_6|NZ_CP038223.1_338882_339296_+	pfam12802, MarR_2, MarR family	NA|640aa|up_5|NZ_CP038223.1_339330_341250_+	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	NA|64aa|up_4|NZ_CP038223.1_341571_341763_-	NA	NA|481aa|up_3|NZ_CP038223.1_341873_343316_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|553aa|up_2|NZ_CP038223.1_343398_345057_-	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|1565aa|up_1|NZ_CP038223.1_345139_349834_-	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|5060aa|up_0|NZ_CP038223.1_349817_364997_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|4592aa|down_0|NZ_CP038223.1_382550_396326_-	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|45aa|down_1|NZ_CP038223.1_396373_396508_+	NA	NA|411aa|down_2|NZ_CP038223.1_396927_398160_+	PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional	NA|391aa|down_3|NZ_CP038223.1_398545_399718_+	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase	NA|79aa|down_4|NZ_CP038223.1_399684_399921_-	NA	NA|421aa|down_5|NZ_CP038223.1_400037_401300_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|68aa|down_6|NZ_CP038223.1_401670_401874_-	NA	NA|113aa|down_7|NZ_CP038223.1_402126_402465_+	NA	NA|420aa|down_8|NZ_CP038223.1_402576_403836_+	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|259aa|down_9|NZ_CP038223.1_403823_404600_+	PRK07112, PRK07112, enoyl-CoA hydratase/isomerase
GCF_008728335.1_ASM872833v1	NZ_CP038223	Burkholderia pseudomallei strain Yap3a chromosome 2, complete sequence	2	1903595-1903718	2	CRISPRCasFinder	no		csa3,DinG,cas3	Orphan	AACGCCGGGCGCGCCGCCGCGCACGGCTCGTCGG	34	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,cas3,WYL,DinG	NA|86aa|up_9|NZ_CP038223.1_1896511_1896769_+,NA|100aa|up_8|NZ_CP038223.1_1896773_1897073_+,NA|149aa|up_7|NZ_CP038223.1_1897174_1897621_+,NA|90aa|up_6|NZ_CP038223.1_1898295_1898565_+,NA|119aa|up_5|NZ_CP038223.1_1898870_1899227_+,NA|99aa|up_4|NZ_CP038223.1_1899263_1899560_+,NA|117aa|up_2|NZ_CP038223.1_1901514_1901865_-,NA|115aa|up_1|NZ_CP038223.1_1902315_1902660_+,NA	NA|86aa|up_9|NZ_CP038223.1_1896511_1896769_+	NA	NA|100aa|up_8|NZ_CP038223.1_1896773_1897073_+	NA	NA|149aa|up_7|NZ_CP038223.1_1897174_1897621_+	NA	NA|90aa|up_6|NZ_CP038223.1_1898295_1898565_+	NA	NA|119aa|up_5|NZ_CP038223.1_1898870_1899227_+	NA	NA|99aa|up_4|NZ_CP038223.1_1899263_1899560_+	NA	NA|286aa|up_3|NZ_CP038223.1_1899977_1900835_+	pfam06629, MipA, MltA-interacting protein MipA	NA|117aa|up_2|NZ_CP038223.1_1901514_1901865_-	NA	NA|115aa|up_1|NZ_CP038223.1_1902315_1902660_+	NA	NA|186aa|up_0|NZ_CP038223.1_1902885_1903443_+	pfam11448, DUF3005, Protein of unknown function (DUF3005)	NA|170aa|down_0|NZ_CP038223.1_1903907_1904417_+	pfam05974, DUF892, Domain of unknown function (DUF892)	NA|299aa|down_1|NZ_CP038223.1_1904715_1905612_-	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|253aa|down_2|NZ_CP038223.1_1905670_1906429_-	pfam14344, DUF4397, Domain of unknown function (DUF4397)	NA|492aa|down_3|NZ_CP038223.1_1907122_1908598_+	PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional	NA|63aa|down_4|NZ_CP038223.1_1908665_1908854_+	pfam11450, DUF3008, Protein of unknwon function (DUF3008)	NA|54aa|down_5|NZ_CP038223.1_1908898_1909060_+	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|129aa|down_6|NZ_CP038223.1_1909109_1909496_+	pfam11226, DUF3022, Protein of unknown function (DUF3022)	NA|709aa|down_7|NZ_CP038223.1_1909631_1911758_+	PRK11249, katE, hydroperoxidase II; Provisional	NA|168aa|down_8|NZ_CP038223.1_1911780_1912284_+	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|369aa|down_9|NZ_CP038223.1_1912365_1913472_+	TIGR02772, conserved_hypothetical_protein, Ku protein, prokaryotic
GCF_008728335.1_ASM872833v1	NZ_CP038223	Burkholderia pseudomallei strain Yap3a chromosome 2, complete sequence	3	2244051-2244143	3	CRISPRCasFinder	no		csa3,DinG,cas3	Orphan	TCGCCGCCGCGCGCGACGACGCGC	24	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,cas3,WYL,DinG	NA|86aa|up_6|NZ_CP038223.1_2239839_2240097_-,NA|168aa|down_3|NZ_CP038223.1_2248762_2249266_+,NA|170aa|down_4|NZ_CP038223.1_2249323_2249833_-,NA|53aa|down_6|NZ_CP038223.1_2252030_2252189_-	NA|393aa|up_9|NZ_CP038223.1_2235325_2236504_-	PRK07058, PRK07058, acetate/propionate family kinase	NA|477aa|up_8|NZ_CP038223.1_2236500_2237931_-	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|598aa|up_7|NZ_CP038223.1_2237914_2239708_-	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|86aa|up_6|NZ_CP038223.1_2239839_2240097_-	NA	NA|529aa|up_5|NZ_CP038223.1_2240068_2241655_+	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|152aa|up_4|NZ_CP038223.1_2241644_2242100_+	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|164aa|up_3|NZ_CP038223.1_2242096_2242588_+	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|103aa|up_2|NZ_CP038223.1_2242580_2242889_+	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|234aa|up_1|NZ_CP038223.1_2242885_2243587_+	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|83aa|up_0|NZ_CP038223.1_2243583_2243832_+	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|669aa|down_0|NZ_CP038223.1_2244578_2246585_+	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|283aa|down_1|NZ_CP038223.1_2246581_2247430_+	pfam00231, ATP-synt, ATP synthase	NA|342aa|down_2|NZ_CP038223.1_2247660_2248686_+	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|168aa|down_3|NZ_CP038223.1_2248762_2249266_+	NA	NA|170aa|down_4|NZ_CP038223.1_2249323_2249833_-	NA	NA|522aa|down_5|NZ_CP038223.1_2250373_2251939_+	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|53aa|down_6|NZ_CP038223.1_2252030_2252189_-	NA	NA|612aa|down_7|NZ_CP038223.1_2252300_2254136_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|375aa|down_8|NZ_CP038223.1_2254285_2255410_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|1077aa|down_9|NZ_CP038223.1_2255412_2258643_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
