The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	321922	361649	3022021	head,tail,terminase,portal,integrase,holin	Lactobacillus_phage(85.71%)	60	321602:321615	361656:361669
321602:321615	attL	TTCTGGAGCTCTTT	NA	NA	NA	NA
WP_014569502.1|321922_323221_-	LysM peptidoglycan-binding domain-containing protein	NA	B4XYQ9	Lactobacillus_phage	99.1	1.2e-232
WP_014569501.1|323231_323645_-|holin	phage holin	holin	A0A0P0IDC6	Lactobacillus_phage	97.9	1.4e-43
WP_014569500.1|323634_323928_-	hypothetical protein	NA	B4XYQ7	Lactobacillus_phage	94.8	5.3e-45
WP_014569499.1|323957_324089_-	XkdX family protein	NA	A0A0P0HRS7	Lactobacillus_phage	97.7	2.5e-18
WP_005686996.1|324081_324405_-	hypothetical protein	NA	B4XYQ6	Lactobacillus_phage	98.1	1.1e-51
WP_087307829.1|324414_326925_-|tail	phage tail protein	tail	B4XYQ5	Lactobacillus_phage	82.6	0.0e+00
WP_015764922.1|326921_328910_-|tail	phage tail protein	tail	B4XYQ4	Lactobacillus_phage	85.9	0.0e+00
WP_014569496.1|328912_332002_-	tape measure protein	NA	A0A0P0IJD2	Lactobacillus_phage	88.0	1.4e-263
WP_015764921.1|331994_332348_-	hypothetical protein	NA	A0A0P0I7N9	Lactobacillus_phage	96.6	5.3e-55
WP_014569494.1|332452_332785_-	hypothetical protein	NA	A0A0P0IQQ6	Lactobacillus_phage	94.5	2.4e-49
WP_014569493.1|332871_333474_-|tail	phage tail protein	tail	A0A0P0ID88	Lactobacillus_phage	93.5	2.4e-100
WP_014569492.1|333485_333890_-	DUF3168 domain-containing protein	NA	A0A0P0I3C8	Lactobacillus_phage	98.5	3.0e-70
WP_015764920.1|333890_334256_-	HK97 gp10 family phage protein	NA	A0A0P0IUZ3	Lactobacillus_phage	96.7	2.0e-57
WP_014569490.1|334252_334555_-	hypothetical protein	NA	A0A0P0HRN0	Lactobacillus_phage	93.0	6.3e-49
WP_014569489.1|334559_334934_-|head,tail	phage head-tail connector protein	head,tail	A0A0P0IZF6	Lactobacillus_phage	91.9	3.2e-58
WP_014569488.1|335161_336175_-	hypothetical protein	NA	A0A0A7RVZ1	Clostridium_phage	26.5	3.1e-23
WP_014569487.1|336190_336847_-	DUF4355 domain-containing protein	NA	A0A0P0ID10	Lactobacillus_phage	80.0	4.3e-58
WP_014569486.1|336971_337964_-	hypothetical protein	NA	A0A0P0ID43	Lactobacillus_phage	95.5	6.2e-178
WP_014569485.1|337929_339357_-|portal	phage portal protein	portal	A0A0P0IJV3	Lactobacillus_phage	90.6	2.7e-243
WP_029943635.1|339361_340717_-|terminase	PBSX family phage terminase large subunit	terminase	A4L7R3	Lactococcus_phage	59.1	4.9e-149
WP_014569483.1|340694_341228_-|terminase	terminase small subunit	terminase	A0A0P0IUY4	Lactobacillus_phage	94.1	2.7e-63
WP_015764918.1|341264_341585_-	ribonucleoside-diphosphate reductase	NA	A8YQN5	Lactobacillus_phage	92.4	9.0e-54
WP_014569481.1|341577_342120_-	endonuclease	NA	B4XYU1	Lactobacillus_phage	100.0	1.1e-107
WP_014569480.1|342132_343281_-	hypothetical protein	NA	B4XYU0	Lactobacillus_phage	98.7	2.4e-221
WP_005711378.1|344308_344737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101495025.1|344954_345026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029943634.1|345031_345214_-	hypothetical protein	NA	A0A0P0I365	Lactobacillus_phage	61.7	1.6e-15
WP_101495024.1|345499_345865_-	hypothetical protein	NA	C1KFE5	Lactobacillus_virus	58.0	3.2e-31
WP_014569478.1|345858_346290_-	hypothetical protein	NA	C1KFE8	Lactobacillus_virus	69.9	1.1e-49
WP_029943632.1|346279_346483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015764915.1|346469_346649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014569477.1|346638_347145_-	DUF1642 domain-containing protein	NA	Q8LTB6	Lactobacillus_phage	72.9	8.6e-59
WP_014569476.1|347141_347327_-	hypothetical protein	NA	Q6J1V0	Lactobacillus_phage	88.5	5.1e-25
WP_014569475.1|347338_347803_-	hypothetical protein	NA	A0A0P0IXF6	Lactobacillus_phage	98.0	7.2e-20
WP_014569474.1|347815_348217_-	RusA family crossover junction endodeoxyribonuclease	NA	A8YQM5	Lactobacillus_phage	71.5	2.6e-50
WP_014569473.1|348213_348468_-	hypothetical protein	NA	A0A0P0IQP0	Lactobacillus_phage	94.0	4.6e-37
WP_014569472.1|348514_348964_-	hypothetical protein	NA	B4XYT0	Lactobacillus_phage	93.2	6.2e-69
WP_015764330.1|349333_349525_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014569471.1|349521_349737_-	helix-turn-helix transcriptional regulator	NA	A0A0P0IJY1	Lactobacillus_phage	91.4	6.1e-30
WP_014569470.1|349754_350240_-	single-stranded DNA-binding protein	NA	U5U726	Lactobacillus_phage	86.3	8.8e-61
WP_014569469.1|350252_351209_-	DnaD domain protein	NA	A0A1B0Y2R2	Lactobacillus_phage	90.9	2.0e-128
WP_014569468.1|351224_351989_-	hypothetical protein	NA	A0A0P0IZH9	Lactobacillus_phage	54.0	4.0e-76
WP_014569467.1|352008_352884_-	recombinase RecT	NA	A0A1X9I5N6	Streptococcus_phage	52.2	5.7e-58
WP_064460579.1|352895_353099_-	hypothetical protein	NA	A8YQL1	Lactobacillus_phage	98.5	2.5e-33
WP_014569466.1|353091_353319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015764912.1|353462_353693_-	helix-turn-helix domain-containing protein	NA	A0A1B0Y6A3	Lactobacillus_phage	98.6	5.5e-37
WP_014569463.1|353671_354220_-	hypothetical protein	NA	A0A1B0YE60	Lactobacillus_phage	97.8	1.0e-97
WP_014569461.1|354531_354759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029943629.1|354755_355004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014569460.1|355000_355243_-	helix-turn-helix transcriptional regulator	NA	A0A0P0HRP5	Lactobacillus_phage	95.0	4.6e-34
WP_003574523.1|355377_355716_+	helix-turn-helix domain-containing protein	NA	A0A0P0IZG9	Lactobacillus_phage	98.2	6.6e-55
WP_014569459.1|355705_356128_+	toxin	NA	A0A1B0YA58	Lactobacillus_phage	93.5	5.1e-73
WP_014569458.1|356187_356889_+	DUF3862 domain-containing protein	NA	A9D9J1	Lactobacillus_prophage	39.3	5.1e-25
WP_003606998.1|356995_357751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003606997.1|357751_357973_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015764910.1|358355_358781_+	pyridoxamine 5'-phosphate oxidase family protein	NA	A0A0P0I7K6	Lactobacillus_phage	94.3	2.5e-59
WP_005716134.1|358804_359008_+	hypothetical protein	NA	A0A0P0IQK8	Lactobacillus_phage	85.1	8.6e-26
WP_014569456.1|359118_360120_+	hypothetical protein	NA	A0A1S5SA20	Streptococcus_phage	23.3	4.4e-06
WP_005716132.1|360087_360294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014569455.1|360464_361649_+|integrase	site-specific integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	99.2	7.3e-226
361656:361669	attR	AAAGAGCTCCAGAA	NA	NA	NA	NA
>prophage 2
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	411259	515433	3022021	head,tail,capsid,terminase,portal,integrase,tRNA,transposase	Staphylococcus_phage(10.34%)	104	415270:415287	493044:493061
WP_087307797.1|411259_412050_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_150861195.1|412196_412550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039141214.1|412623_413511_-	EamA family transporter	NA	NA	NA	NA	NA
WP_150861196.1|413639_414427_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_121496526.1|414466_414808_-	galactokinase	NA	NA	NA	NA	NA
WP_016382253.1|415060_416941_+	beta-galactosidase large subunit / lactate large subunit	NA	L0N6M2	Herpes_simplex_virus	35.6	2.2e-99
415270:415287	attL	AACCGACTTTGATACGAT	NA	NA	NA	NA
WP_004559688.1|416924_417884_+	beta-galactosidase	NA	NA	NA	NA	NA
WP_087307797.1|418280_419070_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_014569430.1|419920_420793_+	DegV family protein	NA	NA	NA	NA	NA
WP_014569429.1|421173_421629_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014569428.1|421757_423656_-	M13 family metallopeptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	27.0	5.2e-56
WP_014569427.1|423778_424654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014569426.1|424729_425545_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_029944032.1|425621_426824_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	36.2	9.2e-59
WP_087307797.1|427642_428432_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_150861197.1|429198_430695_+|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_014569423.1|433037_434969_-	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	33.2	2.4e-80
WP_070706617.1|435671_437039_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	E4ZFI6	Streptococcus_phage	50.6	2.1e-120
WP_005713716.1|437040_438075_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	28.8	6.8e-18
WP_014569421.1|438286_439717_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_014569420.1|439718_441173_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_005710356.1|441176_441473_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_005688838.1|441524_442676_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_014569419.1|442688_444713_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.6e-103
WP_014569418.1|444760_447013_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.0	1.1e-137
WP_029943929.1|447195_447300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014569417.1|447290_447422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005710360.1|447490_447811_+	DUF898 family protein	NA	S5MNN8	Brevibacillus_phage	67.3	1.1e-14
WP_014569416.1|447861_448647_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_014569415.1|448650_449835_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_014569414.1|449948_450131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014569413.1|450280_451588_+	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	37.5	5.1e-79
WP_005684616.1|451580_451913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005684614.1|452103_452607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005684613.1|452631_453066_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_005684612.1|453499_453694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005716059.1|453767_454301_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_014569412.1|454458_456000_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_014569411.1|455996_456728_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.3	2.5e-35
WP_015764896.1|456744_457140_-	membrane protein	NA	NA	NA	NA	NA
WP_005716056.1|457850_458219_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003568375.1|458330_458579_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_003568371.1|458594_458735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013245616.1|459475_459817_-|head	phage head closure protein	head	I7AUE6	Enterococcus_phage	38.4	1.2e-08
WP_019728374.1|459800_460091_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_005716052.1|460146_461691_-|capsid	phage major capsid protein	capsid	A0A2H4J9X8	uncultured_Caudovirales_phage	31.3	1.0e-33
WP_150861198.1|461677_462862_-|portal	phage portal protein	portal	A0A2H4JB06	uncultured_Caudovirales_phage	34.7	5.3e-59
WP_013245613.1|462866_463046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150861199.1|463011_464715_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	41.2	1.1e-113
WP_003593553.1|464711_465182_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_049168808.1|465306_465732_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	41.4	4.2e-14
WP_005716049.1|465763_466105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005717772.1|466456_467848_-	hypothetical protein	NA	A0A0M4RE09	Enterococcus_phage	32.8	1.5e-41
WP_032954482.1|467840_468668_-	DNA replication protein	NA	A0A1B3B066	Gordonia_phage	28.1	7.3e-15
WP_005716042.1|468651_468840_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005716040.1|468836_469112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005716038.1|469156_469348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005716036.1|469458_469680_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005716035.1|469747_470026_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_150861200.1|470154_470808_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005716031.1|470901_472050_+|integrase	site-specific integrase	integrase	A0A097BYJ7	Leuconostoc_phage	28.9	1.0e-30
WP_150861201.1|472716_475011_-	alpha-galactosidase	NA	NA	NA	NA	NA
WP_070706609.1|475234_476107_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_070706611.1|476103_477060_-	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_070706613.1|477060_477900_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_070706615.1|477896_478661_-	acyl-phosphate glycerol 3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_005684599.1|478692_480057_-	amino acid permease	NA	NA	NA	NA	NA
WP_005684598.1|480271_480727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005684597.1|480995_482009_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_076638917.1|481998_482277_-	ATP-dependent nuclease subunit B	NA	NA	NA	NA	NA
WP_005688791.1|482433_482757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014569400.1|482753_483221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029943925.1|483180_483492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014569399.1|483461_483884_-	type II secretion system protein	NA	NA	NA	NA	NA
WP_014569398.1|483880_484201_-	type II secretion system protein	NA	NA	NA	NA	NA
WP_070707058.1|484203_485157_-	type II secretion system protein F	NA	NA	NA	NA	NA
WP_014569396.1|485153_486023_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_005684587.1|486398_487130_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005716007.1|487200_487692_-	VanZ family protein	NA	NA	NA	NA	NA
WP_014569395.1|487765_489571_+	M3 family oligoendopeptidase	NA	NA	NA	NA	NA
WP_005716005.1|489720_491532_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1GV45	Paramecium_bursaria_Chlorella_virus	38.0	6.8e-90
WP_064532784.1|491829_492030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014569394.1|492298_493663_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
493044:493061	attR	ATCGTATCAAAGTCGGTT	NA	NA	NA	NA
WP_014569393.1|493675_494815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005684581.1|494811_495669_-	TIGR00159 family protein	NA	NA	NA	NA	NA
WP_014569392.1|495929_496664_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.4	1.7e-26
WP_014569391.1|496653_497793_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_014569390.1|497826_498507_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150861202.1|498582_501375_+	cation-transporting P-type ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	29.4	2.0e-72
WP_014569388.1|501566_501758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005688760.1|502079_502445_+	hypothetical protein	NA	A0A0P0I7G8	Lactobacillus_phage	77.8	3.9e-45
WP_014569387.1|502472_503045_+	DUF5067 domain-containing protein	NA	Q6SEF8	Lactobacillus_prophage	48.1	1.6e-29
WP_005684572.1|503255_504329_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005684571.1|504312_505146_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_005684570.1|505135_505960_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	26.7	8.9e-13
WP_005688752.1|506053_507142_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	46.0	1.4e-37
WP_005684568.1|507155_507695_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014569386.1|507918_510033_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_014569385.1|510069_510933_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_015764893.1|511114_511873_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	48.1	1.1e-60
WP_014569383.1|511884_512427_+	exonuclease	NA	A0A1S5SFA9	Streptococcus_phage	41.0	8.2e-23
WP_150861203.1|512614_513874_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_070707056.1|513866_514763_-	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	26.6	2.5e-08
WP_005684560.1|514968_515433_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	545707	555126	3022021	transposase	Streptococcus_phage(33.33%)	11	NA	NA
WP_124781881.1|545707_546601_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	1.1e-37
WP_005684526.1|546670_547261_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	52.3	8.3e-53
WP_005684525.1|547380_547836_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014569373.1|548126_549074_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	41.0	1.7e-55
WP_014569372.1|549078_550107_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	51.7	3.0e-90
WP_005684522.1|550103_550991_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	1.4e-08
WP_014569371.1|551085_551247_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076638769.1|551212_551350_+	Malolactic regulator	NA	NA	NA	NA	NA
WP_076638768.1|551315_551483_+	IMP cyclohydrolase	NA	NA	NA	NA	NA
WP_014569370.1|551490_552030_-	membrane protein	NA	NA	NA	NA	NA
WP_049173125.1|552231_555126_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.0	1.0e-305
>prophage 4
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	1283534	1319859	3022021	transposase	Bacillus_virus(12.5%)	37	NA	NA
WP_014569018.1|1283534_1285031_-|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_005687428.1|1285134_1286838_+	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_005687427.1|1286922_1287702_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_005687426.1|1287711_1288698_+	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005687425.1|1288707_1289439_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.1	1.5e-27
WP_005687424.1|1289946_1290387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029943900.1|1290364_1290709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005687423.1|1290751_1291075_-	sulfur reduction protein DsrE	NA	NA	NA	NA	NA
WP_005687419.1|1291210_1292668_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.3	1.1e-40
WP_005687418.1|1292861_1293212_+	YisL family protein	NA	NA	NA	NA	NA
WP_005687417.1|1293253_1293622_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_005687416.1|1293667_1293964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087307804.1|1294036_1294804_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_049173404.1|1294998_1296435_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	26.3	1.2e-33
WP_150861234.1|1296480_1297845_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA	NA
WP_005687412.1|1297867_1298362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005687411.1|1298381_1298705_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_005687410.1|1298714_1299029_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_005687409.1|1299309_1300311_-	D-2-hydroxyacid dehydrogenase	NA	M1HFV8	Paramecium_bursaria_Chlorella_virus	31.8	1.2e-40
WP_005687408.1|1300416_1300908_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	35.3	7.4e-15
WP_005687407.1|1301111_1301786_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.4	6.6e-38
WP_070706490.1|1301782_1302850_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_005687405.1|1302976_1303483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095691935.1|1303574_1304362_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012491083.1|1304695_1304968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005688285.1|1305027_1307832_-	cation-transporting P-type ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	27.5	4.5e-72
WP_121497133.1|1308171_1308291_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_032961985.1|1308373_1309057_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.3	3.1e-59
WP_150861235.1|1309374_1310871_-|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_048516665.1|1311478_1312870_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_005688248.1|1312887_1313532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005710972.1|1313961_1314228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014568966.1|1314517_1315600_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_005688240.1|1315729_1315981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005688238.1|1316237_1317314_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_005688236.1|1317414_1318395_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_014568965.1|1318920_1319859_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	1818153	1873907	3022021	integrase,protease,transposase,tRNA	Klosneuvirus(15.38%)	60	1842870:1842884	1860788:1860802
WP_005713450.1|1818153_1820136_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	37.3	3.5e-95
WP_005690997.1|1820194_1820641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005685226.1|1820691_1820904_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	40.9	1.8e-05
WP_005713448.1|1821068_1822982_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.0	2.1e-20
WP_150861260.1|1822968_1824795_-	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	31.1	8.3e-19
WP_005713443.1|1824848_1825760_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_005713442.1|1825746_1826451_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_005714124.1|1826586_1827468_-	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_083313391.1|1827566_1827710_+	acetyltransferase	NA	NA	NA	NA	NA
WP_077069940.1|1827706_1827865_+	ATP-dependent nuclease subunit B	NA	NA	NA	NA	NA
WP_150861261.1|1827887_1828886_-	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
WP_005714122.1|1829100_1829592_+	PTS galactitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_005713432.1|1829598_1830378_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
WP_005685238.1|1830374_1830944_+	ribonuclease M5	NA	NA	NA	NA	NA
WP_141756138.1|1830930_1831821_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_076638875.1|1831862_1831988_+	Malolactic regulator	NA	NA	NA	NA	NA
WP_076638873.1|1831947_1832100_+	acetyltransferase	NA	NA	NA	NA	NA
WP_005685240.1|1832166_1832418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005685241.1|1832663_1833542_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_005685242.1|1833597_1834476_+	cation transporter	NA	NA	NA	NA	NA
WP_005685244.1|1834571_1835333_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_005685245.1|1835329_1835980_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_005685246.1|1836201_1837050_+	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	26.4	1.1e-05
WP_005685247.1|1837046_1838252_+	glycopeptide antibiotics resistance protein	NA	NA	NA	NA	NA
WP_076638876.1|1838384_1838525_+	Malolactic regulator	NA	NA	NA	NA	NA
WP_087307855.1|1838490_1838595_+	Malolactic regulator	NA	NA	NA	NA	NA
WP_005685248.1|1838775_1840164_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L140	Tupanvirus	33.6	1.5e-28
WP_005691037.1|1840261_1841236_+	ribose-phosphate diphosphokinase	NA	A0A2K9L8D8	Tupanvirus	36.1	2.0e-43
WP_005685250.1|1841332_1841662_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_014570138.1|1841750_1842191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005685253.1|1842336_1842717_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_005685254.1|1842779_1843838_-	membrane protein	NA	NA	NA	NA	NA
1842870:1842884	attL	CACCAAGGCCAGATA	NA	NA	NA	NA
WP_005685256.1|1843909_1844362_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_005685257.1|1844373_1845726_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	32.5	3.5e-30
WP_005685259.1|1845715_1846564_-	lipoate--protein ligase A	NA	NA	NA	NA	NA
WP_015765067.1|1846710_1846863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005685261.1|1846902_1847349_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_005685262.1|1847401_1848073_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_005685263.1|1848299_1849175_+	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_005685264.1|1849424_1849781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005685265.1|1849820_1850165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005685266.1|1850265_1851453_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_032961799.1|1851818_1853276_-|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_032961799.1|1853472_1854930_-|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_005686647.1|1855193_1856798_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	48.8	7.1e-139
WP_031546130.1|1856977_1857211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686643.1|1857288_1858548_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_005691061.1|1858644_1858896_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_049173473.1|1859026_1860289_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_010490992.1|1860340_1860613_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019899265.1|1860962_1861220_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
1860788:1860802	attR	TATCTGGCCTTGGTG	NA	NA	NA	NA
WP_031546141.1|1861240_1861639_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_002816285.1|1863569_1863821_+|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	96.4	9.2e-38
WP_031546164.1|1865190_1865601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010491013.1|1867865_1868081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031546167.1|1868084_1869209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021353390.1|1869363_1869453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002816607.1|1870014_1870698_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	51.8	2.1e-60
WP_077069601.1|1871684_1871786_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_032962056.1|1871792_1873907_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.0	1.4e-118
>prophage 6
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	1899257	1907579	3022021		Streptococcus_phage(85.71%)	10	NA	NA
WP_031546577.1|1899257_1901723_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	64.4	0.0e+00
WP_010491186.1|1901706_1902099_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	73.6	6.5e-46
WP_031546580.1|1902160_1902658_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	45.2	1.7e-35
WP_003606383.1|1902661_1902883_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	83.6	1.7e-27
WP_031546582.1|1902981_1903716_-	site-specific DNA-methyltransferase	NA	A0A2K8IKC3	Lactococcus_phage	53.6	1.1e-67
WP_031546584.1|1903846_1904173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150861262.1|1904162_1905353_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	43.2	1.3e-92
WP_031546588.1|1905668_1905929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010491202.1|1905925_1906201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031546590.1|1906211_1907579_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	61.3	5.2e-151
>prophage 7
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	2002548	2112327	3022021	protease,bacteriocin,transposase	Bacillus_phage(26.67%)	106	NA	NA
WP_014568964.1|2002548_2003952_+|transposase	ISLre2-like element ISLrh4 family transposase	transposase	NA	NA	NA	NA
WP_005686771.1|2004140_2004587_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_003567483.1|2004600_2004993_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_033572395.1|2005114_2005651_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_107755086.1|2005602_2006496_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	1.9e-37
WP_005687781.1|2006868_2008053_+	MFS transporter	NA	NA	NA	NA	NA
WP_005687783.1|2008277_2010068_+	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.0	8.2e-11
WP_005687784.1|2010054_2011890_+	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	25.2	3.3e-07
WP_077069934.1|2012122_2012395_-	ATP-dependent nuclease subunit B	NA	NA	NA	NA	NA
WP_005687786.1|2012576_2013245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031546856.1|2013485_2014304_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_005687789.1|2014296_2014998_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.4	3.1e-30
WP_005687791.1|2014994_2016236_+	acyltransferase	NA	NA	NA	NA	NA
WP_150861263.1|2016186_2017719_+	AMP-binding protein	NA	Q75ZG1	Hepacivirus	28.8	7.4e-29
WP_005687795.1|2017708_2018683_+	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005687797.1|2018890_2021614_-	Bacterial alpha-L-rhamnosidase	NA	NA	NA	NA	NA
WP_005687799.1|2022251_2023766_+	MFS transporter	NA	NA	NA	NA	NA
WP_005687801.1|2024269_2024680_+	CrcB family protein	NA	NA	NA	NA	NA
WP_005687803.1|2024673_2025033_+	CrcB family protein	NA	A0A2H4J148	uncultured_Caudovirales_phage	39.1	3.5e-06
WP_005687805.1|2025180_2025471_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077069585.1|2027146_2029615_+	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA	NA
WP_005686787.1|2030256_2030406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005686788.1|2030600_2031503_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005714580.1|2031843_2032353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686792.1|2032480_2033122_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_077069933.1|2033193_2033352_+	ATP-dependent nuclease subunit B	NA	NA	NA	NA	NA
WP_005686794.1|2033614_2034532_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005686796.1|2034729_2034849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686799.1|2034933_2035203_+	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_005686802.1|2035542_2036286_+	metal ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	26.6	5.2e-12
WP_150861264.1|2036282_2037176_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_005686806.1|2037172_2038114_+	manganese ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005686809.1|2038204_2038537_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005686811.1|2038656_2039265_-	cation transporter	NA	NA	NA	NA	NA
WP_005692195.1|2039411_2039606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005686815.1|2039709_2041239_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_005686817.1|2041272_2042643_+	MFS transporter	NA	NA	NA	NA	NA
WP_005686819.1|2042957_2043323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005686820.1|2043611_2046329_-	HAD-IC family P-type ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	27.5	1.9e-59
WP_099981497.1|2046758_2048336_+	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_005686824.1|2048319_2048457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077069583.1|2048434_2048659_-	alpha-galactosidase	NA	NA	NA	NA	NA
WP_031546833.1|2048618_2048810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005686826.1|2048982_2049726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686828.1|2049901_2051281_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_005686829.1|2051330_2051648_+	SHOCT domain-containing protein	NA	NA	NA	NA	NA
WP_005686831.1|2051672_2052818_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_005686833.1|2052847_2053582_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_083313382.1|2053907_2054066_+	alpha-galactosidase	NA	NA	NA	NA	NA
WP_005686835.1|2054173_2055127_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_005686837.1|2055301_2055643_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_005686839.1|2055933_2056266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686841.1|2056438_2057866_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	26.7	6.1e-33
WP_005686843.1|2057920_2058361_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_150861265.1|2058681_2059488_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_005686847.1|2059537_2059723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686849.1|2060108_2060294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686851.1|2060353_2060539_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_005686853.1|2060626_2060854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005686855.1|2061007_2061166_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_150861266.1|2061343_2061643_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_005686864.1|2061892_2062138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014569018.1|2062540_2064037_-|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_077069578.1|2064243_2064426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_133065326.1|2064429_2064672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686865.1|2064832_2065609_-	LytR domain-containing response regulator	NA	NA	NA	NA	NA
WP_005686867.1|2065613_2066909_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_005686870.1|2067523_2069716_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	25.5	2.8e-37
WP_005686874.1|2071169_2071580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686876.1|2071759_2073115_+	threonine/serine exporter family protein	NA	NA	NA	NA	NA
WP_150861267.1|2073210_2073747_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_107755086.1|2073698_2074592_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	1.9e-37
WP_032952450.1|2074687_2074867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005687851.1|2076102_2076393_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_005687853.1|2077239_2078025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005687855.1|2078021_2078354_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005687856.1|2078484_2079135_-	helix-turn-helix transcriptional regulator	NA	B5LPU3	Bacillus_virus	42.3	3.4e-07
WP_087307797.1|2079590_2080381_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_005687860.1|2081549_2082758_+	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
WP_005687861.1|2082926_2083484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005687863.1|2083779_2086710_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_150861268.1|2086711_2088067_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_150861269.1|2088057_2089611_+	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA	NA
WP_005687869.1|2089617_2090442_+	class C sortase	NA	NA	NA	NA	NA
WP_005687870.1|2090670_2091213_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124781881.1|2091340_2092234_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	1.1e-37
WP_033572395.1|2092185_2092722_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005709747.1|2093261_2093447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150861270.1|2093492_2093657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014568964.1|2093753_2095157_+|transposase	ISLre2-like element ISLrh4 family transposase	transposase	NA	NA	NA	NA
WP_005709745.1|2095481_2096318_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.9	9.6e-47
WP_005709743.1|2096398_2097655_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	55.6	7.8e-109
WP_005714547.1|2097726_2098959_-	MFS transporter	NA	NA	NA	NA	NA
WP_005714546.1|2099649_2099904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686086.1|2100103_2100310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005686089.1|2100499_2100757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005714545.1|2100956_2102135_-	sugar diacid utilization regulator	NA	NA	NA	NA	NA
WP_005709732.1|2102262_2103480_+	MFS transporter	NA	NA	NA	NA	NA
WP_070463027.1|2103472_2104216_+	nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_150861271.1|2104243_2105422_+	MFS transporter	NA	NA	NA	NA	NA
WP_014569018.1|2105423_2106920_-|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_005709728.1|2107050_2108241_+	phosphopentomutase	NA	NA	NA	NA	NA
WP_005686092.1|2108368_2108578_+	CsbD family protein	NA	NA	NA	NA	NA
WP_005692305.1|2108740_2109856_+	L-lactate oxidase	NA	NA	NA	NA	NA
WP_005686095.1|2110101_2110386_-	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_014569018.1|2110830_2112327_+|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	2531948	2550968	3022021	protease,transposase	Bacillus_phage(50.0%)	15	NA	NA
WP_014569018.1|2531948_2533445_+|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_005687340.1|2534110_2535109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005687341.1|2535123_2535666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014569818.1|2537518_2537647_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150861306.1|2537607_2537871_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_014569018.1|2537984_2539481_-|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_107755086.1|2539856_2540750_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	1.9e-37
WP_014569708.1|2540701_2541238_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005685952.1|2541434_2541746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076638878.1|2541882_2542611_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_077069472.1|2542627_2543119_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_005685958.1|2543106_2544693_-	reverse transcriptase	NA	NA	NA	NA	NA
WP_005685962.1|2545369_2545696_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_150861307.1|2546352_2549955_+	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
WP_005685966.1|2550209_2550968_-|protease	matrixin family metalloprotease	protease	G9I094	Helicoverpa_zea_nudivirus	54.3	2.2e-05
>prophage 9
NZ_CP044228	Lactobacillus rhamnosus strain hsryfm 1301 chromosome, complete genome	3022021	2892056	2948839	3022021	protease,tRNA,transposase	Bacillus_phage(30.77%)	60	NA	NA
WP_107755086.1|2892056_2892950_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	1.9e-37
WP_014569708.1|2892901_2893438_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005684322.1|2893825_2894578_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	40.4	2.8e-21
WP_005684321.1|2894613_2895402_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_005684320.1|2895418_2896660_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_005684319.1|2896683_2898414_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.1	4.8e-08
WP_014569707.1|2898535_2902870_+	PolC-type DNA polymerase III	NA	A0A0A7RWA3	Clostridium_phage	34.6	1.8e-19
WP_005684317.1|2903124_2903604_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_005684315.1|2903620_2904829_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_005684314.1|2904840_2905134_+	YlxR family protein	NA	NA	NA	NA	NA
WP_005684313.1|2905136_2905436_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA	NA
WP_005684312.1|2905456_2908255_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	40.0	7.5e-19
WP_150861317.1|2908174_2908369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080981376.1|2908345_2908549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080565100.1|2908542_2908707_+	alpha-galactosidase	NA	NA	NA	NA	NA
WP_003565780.1|2908681_2909035_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_014569706.1|2909292_2909964_+	DUF475 domain-containing protein	NA	S5MAL1	Bacillus_phage	45.5	9.8e-34
WP_014569705.1|2910039_2910945_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_005684300.1|2910952_2911900_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
WP_005684298.1|2911901_2913047_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_070706624.1|2913205_2914252_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_005684296.1|2914321_2914915_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_005684295.1|2914944_2916804_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	52.4	2.2e-139
WP_087307871.1|2916815_2916902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005684294.1|2916916_2918077_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.6	8.7e-22
WP_005684293.1|2918349_2920188_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.1	3.1e-21
WP_005684291.1|2920394_2920613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005684290.1|2920618_2921095_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_005684289.1|2921299_2921671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005684288.1|2921985_2924280_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	31.6	6.7e-74
WP_005684287.1|2924276_2924804_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	40.0	1.6e-23
WP_005684286.1|2924882_2925383_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_005684285.1|2925398_2925716_+	DUF960 domain-containing protein	NA	NA	NA	NA	NA
WP_005684282.1|2925884_2926679_+	N-formylglutamate amidohydrolase	NA	NA	NA	NA	NA
WP_005684281.1|2926853_2927864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014569018.1|2928055_2929552_-|transposase	IS5-like element ISLrh2 family transposase	transposase	NA	NA	NA	NA
WP_005687689.1|2929832_2930390_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005687688.1|2930392_2930983_+	NAD(P)H dehydrogenase	NA	NA	NA	NA	NA
WP_049173427.1|2931218_2931701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150861318.1|2931697_2932183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049173429.1|2932608_2932833_-	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
WP_049173430.1|2933015_2933213_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_049173431.1|2933622_2934408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150861319.1|2934404_2935559_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	NA	NA	NA	NA
WP_033572982.1|2936026_2936413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005687686.1|2936412_2936592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070706779.1|2936954_2937341_+	YxeA family protein	NA	NA	NA	NA	NA
WP_005687684.1|2937409_2937658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005687683.1|2937763_2938369_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_005687682.1|2938365_2938860_+	DUF3013 family protein	NA	NA	NA	NA	NA
WP_005687681.1|2938940_2939885_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_014569694.1|2939923_2940652_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_005687679.1|2940689_2941013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005687678.1|2941317_2943543_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	J9Q7H7	Salmonella_phage	35.1	3.1e-07
WP_087307797.1|2943720_2944510_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_005687677.1|2944544_2944991_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_005687676.1|2944990_2945617_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_005687675.1|2945718_2947041_-	SH3 domain-containing protein	NA	J9PV86	Bacillus_phage	30.2	3.0e-10
WP_005687674.1|2947128_2947575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087307797.1|2948048_2948839_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
