The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	722863	756163	4129232	transposase,tail	Pseudomonas_phage(24.0%)	45	NA	NA
WP_151053661.1|722863_724216_-	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	36.6	7.2e-36
WP_151053662.1|724354_725824_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.4	8.3e-94
WP_151053663.1|725932_727513_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	4.5e-21
WP_151053664.1|727596_728388_-	NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase	NA	NA	NA	NA	NA
WP_151058923.1|728371_728719_-	Mor transcription activator-like protein	NA	NA	NA	NA	NA
WP_151058925.1|728733_729237_-	regulatory protein GemA	NA	A0A0S4L518	Pseudomonas_phage	36.7	2.9e-22
WP_151053665.1|729290_729764_-	hypothetical protein	NA	A0A2P9JZH6	Alteromonadaceae_phage	44.7	4.6e-22
WP_151053666.1|729763_730492_-	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	60.4	1.2e-72
WP_151053667.1|730569_730863_-	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_151058927.1|731121_731748_-	DUF3164 family protein	NA	A0A2H4IYN0	uncultured_Caudovirales_phage	52.3	3.3e-60
WP_151053668.1|731753_732026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053669.1|732022_732289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053670.1|732299_733445_-	AAA family ATPase	NA	A4JWN1	Burkholderia_virus	52.6	3.1e-104
WP_151058929.1|733438_735208_-|transposase	transposase family protein	transposase	Q6QIE0	Burkholderia_phage	60.4	1.8e-199
WP_151053671.1|736225_736534_-	helix-turn-helix domain-containing protein	NA	Q5ZR02	Pseudomonas_phage	62.4	2.7e-23
WP_151053672.1|736530_736779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053673.1|736781_737249_-	hypothetical protein	NA	A4JWN5	Burkholderia_virus	56.5	2.6e-49
WP_151053674.1|737372_737642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053675.1|737757_737967_-	DNA-binding protein	NA	A0A0S4L0D0	Pseudomonas_phage	72.6	1.8e-18
WP_151053676.1|738067_738442_+	XRE family transcriptional regulator	NA	A4JWN8	Burkholderia_virus	39.8	2.3e-08
WP_151053677.1|738448_738694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053678.1|738821_739241_+	PH domain-containing protein	NA	A0A249Y2R5	Serratia_phage	41.8	1.6e-21
WP_151053679.1|739356_739659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053680.1|739732_739957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053681.1|739980_740439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053682.1|740640_740940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053683.1|740941_741556_+	transglycosylase SLT domain-containing protein	NA	J9SGR6	Pseudomonas_phage	55.3	1.4e-55
WP_151053684.1|741540_741933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053685.1|742050_742272_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA	NA
WP_151053686.1|742141_742570_+	DUF2730 family protein	NA	NA	NA	NA	NA
WP_151053687.1|742577_742874_+	ArsR family transcriptional regulator	NA	A0A2I7S9D8	Vibrio_phage	47.9	5.3e-16
WP_151053688.1|742875_743448_+	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	63.0	3.2e-54
WP_151053689.1|743444_745013_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	66.5	7.5e-178
WP_151053690.1|745012_746560_+	DUF935 domain-containing protein	NA	J9SVY0	Pseudomonas_phage	50.6	1.7e-134
WP_151053691.1|746556_746754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053692.1|746753_748028_+	hypothetical protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	39.8	1.3e-79
WP_151053693.1|748142_748610_+	phage virion morphogenesis protein	NA	A0A0K0NKW9	Gordonia_phage	29.4	5.1e-05
WP_151053694.1|748833_749985_+	hypothetical protein	NA	A0A0A7DJT8	Pseudomonas_phage	42.6	4.4e-66
WP_151053695.1|750028_750424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053696.1|750470_751361_+	hypothetical protein	NA	M4SRT6	Rhodobacter_phage	47.8	1.7e-73
WP_151053697.1|751426_751879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053698.1|751881_752310_+	DUF1320 domain-containing protein	NA	B7SDP4	Haemophilus_phage	41.8	6.0e-21
WP_151053699.1|752309_752732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053700.1|752728_753472_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053701.1|753538_756163_+|tail	phage tail tape measure protein	tail	A0A0K0PVV1	Roseobacter_phage	31.9	4.8e-28
>prophage 2
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	814159	883388	4129232	transposase,holin,plate	uncultured_Caudovirales_phage(57.14%)	52	NA	NA
WP_151053745.1|814159_815488_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_151053746.1|815502_816801_+	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_151053747.1|816817_820300_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_151053748.1|820299_820932_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_151053749.1|820924_821719_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_151053750.1|821711_822770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053751.1|822783_823524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053752.1|823547_824642_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_151053753.1|824654_825179_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_151058949.1|825165_826659_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_151053754.1|826667_828017_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_151053755.1|828016_828844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053756.1|828846_829293_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_151053757.1|829295_831119_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_151053758.1|831106_832150_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_151053759.1|832157_833837_+	protein kinase	NA	A0A1V0SBL0	Catovirus	26.3	5.5e-17
WP_151053760.1|833833_836491_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	30.8	5.9e-90
WP_151053761.1|836487_837141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053762.1|837177_837657_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_151058951.1|837703_838168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053763.1|838657_839197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053764.1|839608_840088_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_151053765.1|840254_843143_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	37.6	1.3e-21
WP_151053766.1|843142_843874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151058953.1|844146_844440_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_151053767.1|844794_847920_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	39.5	5.6e-23
WP_151053768.1|847916_848738_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_151053769.1|849218_850037_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_151053770.1|850553_851813_-	PQQ-like beta-propeller repeat protein	NA	NA	NA	NA	NA
WP_151053771.1|851785_856066_-	hypothetical protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	44.1	6.7e-35
WP_151053772.1|856622_858593_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	41.0	4.2e-24
WP_151053773.1|858589_860029_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_151053774.1|860025_861972_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053775.1|861907_863002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053776.1|863102_864137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053777.1|864205_864472_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053778.1|864633_864987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053779.1|865128_868203_+	BspA family leucine-rich repeat surface protein	NA	NA	NA	NA	NA
WP_151053780.1|868273_868735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053781.1|868847_870278_+	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_151053782.1|870246_871017_-	murein peptide amidase A	NA	NA	NA	NA	NA
WP_151053783.1|871096_871678_-	OmpA family protein	NA	NA	NA	NA	NA
WP_151053784.1|871794_873291_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_151053785.1|873641_874049_-	heme-binding protein	NA	NA	NA	NA	NA
WP_151053786.1|874083_875301_-	glycolate oxidase subunit GlcF	NA	NA	NA	NA	NA
WP_151053787.1|875319_876429_-	glycolate oxidase subunit GlcE	NA	NA	NA	NA	NA
WP_151053788.1|876428_877928_-	glycolate oxidase subunit GlcD	NA	NA	NA	NA	NA
WP_151053789.1|878190_878946_+	transcriptional regulator GlcC	NA	NA	NA	NA	NA
WP_151053790.1|878979_879351_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_151053791.1|879331_880054_+	LrgB family protein	NA	NA	NA	NA	NA
WP_151053792.1|880209_881709_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_151053793.1|881723_883388_+|holin	choline dehydrogenase	holin	A0A2K9L353	Tupanvirus	25.8	2.8e-37
>prophage 3
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	1046388	1129320	4129232	protease,integrase,transposase	Staphylococcus_prophage(14.29%)	60	1072519:1072536	1091007:1091024
WP_151053920.1|1046388_1048476_+|protease	BREX system Lon protease-like protein BrxL	protease	NA	NA	NA	NA
WP_151053921.1|1048632_1049922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053922.1|1049953_1051561_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_151053923.1|1053085_1053394_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_151053924.1|1053393_1053762_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_151053925.1|1053806_1055459_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	31.9	1.5e-43
WP_151053926.1|1055904_1057395_-	Hsp70 family protein	NA	A0A2H4UU19	Bodo_saltans_virus	24.1	6.1e-28
WP_151053927.1|1057379_1058546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053928.1|1058538_1059636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053929.1|1059784_1060708_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_151053930.1|1060968_1061316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053931.1|1061312_1061738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053932.1|1061871_1062840_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.2	4.1e-41
WP_151053933.1|1063382_1064381_-	NERD domain-containing protein	NA	NA	NA	NA	NA
WP_151053934.1|1064422_1065013_-	class I SAM-dependent methyltransferase	NA	A0A2H4J5G6	uncultured_Caudovirales_phage	53.2	2.1e-16
WP_151053935.1|1065096_1067721_+	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	32.8	4.1e-35
WP_151053406.1|1067963_1068944_-|transposase	IS5 family transposase	transposase	Q38213	Escherichia_phage	82.0	1.1e-153
WP_151053936.1|1069048_1069513_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_151053937.1|1070169_1071336_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_151053938.1|1071419_1072106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053939.1|1072102_1072381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151053940.1|1072420_1072795_-	hypothetical protein	NA	NA	NA	NA	NA
1072519:1072536	attL	CTTGAAATTGATCAGTAA	NA	NA	NA	NA
WP_151053941.1|1072925_1073765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053942.1|1074239_1075178_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_151053943.1|1075181_1075487_+	gamma-glutamylcyclotransferase	NA	H9D1E0	Salinivibrio_phage	39.0	1.1e-05
WP_151053944.1|1075687_1076692_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_151053945.1|1076716_1077373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053946.1|1077770_1079423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053947.1|1079422_1080919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053948.1|1080982_1082344_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	55.0	2.0e-134
WP_151053949.1|1082966_1084643_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_151053950.1|1084867_1086976_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_151053951.1|1086986_1087832_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_151053952.1|1088451_1090404_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_151053953.1|1090367_1091162_+	response regulator transcription factor	NA	NA	NA	NA	NA
1091007:1091024	attR	TTACTGATCAATTTCAAG	NA	NA	NA	NA
WP_151053954.1|1091412_1092189_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_151053955.1|1092157_1094527_-	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	23.2	6.3e-11
WP_151053956.1|1094800_1102501_+	DUF11 domain-containing protein	NA	NA	NA	NA	NA
WP_151053957.1|1102497_1106586_+	OmpA family protein	NA	NA	NA	NA	NA
WP_151058981.1|1107495_1108737_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_151053958.1|1109117_1110278_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	A0A2D2W2B8	Stenotrophomonas_phage	26.7	4.3e-13
WP_151053959.1|1110274_1111138_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_151053960.1|1111134_1112043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053961.1|1112039_1112795_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_151053962.1|1112779_1113508_+	acylneuraminate cytidylyltransferase family protein	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	33.3	3.2e-06
WP_151053963.1|1113504_1114593_+	UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase	NA	NA	NA	NA	NA
WP_151058983.1|1114619_1115105_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA	NA	NA	NA	NA
WP_151053964.1|1115101_1116157_+	pseudaminic acid synthase	NA	NA	NA	NA	NA
WP_151053965.1|1116204_1117389_+	acyltransferase	NA	NA	NA	NA	NA
WP_151053966.1|1117416_1118757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151053967.1|1118757_1120008_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_151053968.1|1120106_1121285_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_151053969.1|1121265_1122408_+	N-acetyl sugar amidotransferase	NA	NA	NA	NA	NA
WP_151053970.1|1122404_1123025_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_151053971.1|1123025_1123811_+	imidazole glycerol phosphate synthase cyclase subunit	NA	NA	NA	NA	NA
WP_151053972.1|1123828_1124863_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI8	Catovirus	36.8	8.8e-42
WP_151053973.1|1124866_1125988_+	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_151058985.1|1126032_1127163_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	46.8	9.5e-98
WP_151053974.1|1127162_1128323_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_151053975.1|1128351_1129320_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.5	1.6e-40
>prophage 4
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	1532563	1639681	4129232	tRNA,holin,portal,terminase,tail,integrase,head,capsid,transposase,plate	uncultured_Caudovirales_phage(25.58%)	113	1604591:1604635	1638957:1639001
WP_151054435.1|1532563_1533586_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_151054437.1|1533749_1535777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151054439.1|1536078_1536660_-	isopropylmalate isomerase	NA	NA	NA	NA	NA
WP_151054441.1|1536805_1537396_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054443.1|1537873_1538680_+	VPLPA-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_151054445.1|1538830_1539523_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_151054447.1|1539577_1541149_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_151054449.1|1541318_1541681_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_151054451.1|1542144_1542672_+	VPLPA-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_151054453.1|1542768_1544208_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_151054455.1|1544469_1546071_+	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA	NA
WP_151054457.1|1546292_1551725_+	retention module-containing protein	NA	NA	NA	NA	NA
WP_151054459.1|1551896_1552964_-	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B6VT43	Edwardsiella_phage	48.8	4.6e-86
WP_151054462.1|1553122_1555138_+	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_151054464.1|1555324_1555771_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_151054466.1|1556113_1556659_-	hydrolase	NA	NA	NA	NA	NA
WP_151054468.1|1556660_1557776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054470.1|1557772_1558387_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_151054472.1|1558492_1559122_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_151054474.1|1559121_1561236_+|tRNA	tRNA(Met) cytidine acetyltransferase	tRNA	NA	NA	NA	NA
WP_151054476.1|1561225_1562236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151059014.1|1562242_1562893_-	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_151054478.1|1562983_1563688_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_151054480.1|1563707_1565747_-|tRNA	methionine--tRNA ligase	tRNA	A0A2K9KZR3	Tupanvirus	27.3	3.5e-50
WP_151054482.1|1565907_1567128_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_151054484.1|1567198_1568293_+|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	NA	NA	NA	NA
WP_151054485.1|1568507_1569356_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_151054487.1|1569493_1570060_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	71.6	2.0e-72
WP_151054489.1|1570090_1570732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151054491.1|1571085_1572399_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_151054493.1|1572388_1575442_-	efflux RND transporter permease subunit	NA	S5VL66	Leptospira_phage	20.7	2.0e-33
WP_151054495.1|1575438_1576497_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_151054497.1|1576493_1577135_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_151054499.1|1577246_1578443_-	GGDEF domain-containing protein	NA	A0A2K8I9Y5	Pseudomonas_phage	40.0	3.4e-05
WP_151054501.1|1578672_1579857_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_151054503.1|1579970_1581992_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_151054505.1|1582001_1582385_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_151054506.1|1582381_1584802_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_151054508.1|1584840_1585740_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_151054510.1|1585916_1587350_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
WP_151054512.1|1587544_1588759_-	MFS transporter	NA	NA	NA	NA	NA
WP_151054514.1|1589106_1589859_+	YdcF family protein	NA	NA	NA	NA	NA
WP_151054516.1|1590019_1591201_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_151054518.1|1591453_1592248_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_151054520.1|1592501_1592891_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_151054522.1|1592895_1593567_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_151054524.1|1593603_1594848_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_151054526.1|1594844_1595348_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_151054528.1|1595496_1595667_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_151054530.1|1595862_1597458_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.3	1.3e-23
WP_151054532.1|1597537_1598854_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_151054534.1|1598847_1599171_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_151054536.1|1599377_1600178_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_151054537.1|1600412_1600940_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_151054539.1|1600936_1601215_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_151054541.1|1601355_1602903_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	37.1	3.5e-26
WP_151054543.1|1602938_1603475_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_151054545.1|1603465_1603732_-	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_151054547.1|1603854_1604406_-	hypothetical protein	NA	NA	NA	NA	NA
1604591:1604635	attL	TGGTAGGACTAGGCGGACTCGAACCGCCGACCCCCACCATGTCAA	NA	NA	NA	NA
WP_151054549.1|1604791_1605889_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1GN00	Marinobacter_phage	47.6	3.4e-84
WP_151054551.1|1605866_1606088_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_151054553.1|1606077_1606344_-	hypothetical protein	NA	A0A1J0GUZ1	Halomonas_phage	52.4	2.0e-14
WP_151054555.1|1606346_1606691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054557.1|1606687_1607059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054559.1|1607051_1607309_-	hypothetical protein	NA	Q8H9L4	Vibrio_phage	60.3	1.2e-21
WP_151054561.1|1607308_1607689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054563.1|1607681_1608008_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054565.1|1608000_1608621_-	HNH endonuclease	NA	A0A2H4JEM6	uncultured_Caudovirales_phage	32.4	8.8e-21
WP_151054567.1|1608610_1608847_-	hypothetical protein	NA	A0A2H4JCC5	uncultured_Caudovirales_phage	56.8	1.9e-13
WP_151054569.1|1608846_1609053_-	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	52.9	2.1e-08
WP_151054571.1|1609046_1609442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054573.1|1609438_1610101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151059016.1|1610336_1613006_-	toprim domain-containing protein	NA	A0A077K8T2	Ralstonia_phage	46.1	1.4e-221
WP_151054575.1|1613014_1613326_-	ogr/Delta-like zinc finger family protein	NA	Q9ZXJ1	Pseudomonas_virus	43.6	1.5e-13
WP_151054577.1|1613322_1613826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054579.1|1613888_1614071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054581.1|1614136_1614559_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JFL3	uncultured_Caudovirales_phage	51.1	1.1e-19
WP_151054583.1|1614626_1614989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151054585.1|1614993_1615506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151054587.1|1615498_1616320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151054589.1|1616356_1617160_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	43.9	6.2e-59
WP_151054591.1|1617155_1617347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054593.1|1617339_1617768_-	oxidoreductase	NA	Q9ZXJ9	Pseudomonas_virus	58.2	2.9e-39
WP_151054595.1|1617770_1620440_-|tail	phage tail tape measure protein	tail	A0A2H4JE61	uncultured_Caudovirales_phage	47.1	4.4e-162
WP_151059018.1|1620436_1620556_-|tail	GpE family phage tail protein	tail	E5E3Q0	Burkholderia_phage	66.7	6.8e-07
WP_151054597.1|1620564_1620930_-|tail	phage tail assembly protein	tail	A0A1S5NNH9	Burkholderia_phage	57.1	1.3e-19
WP_151054599.1|1621001_1621511_-|tail	phage major tail tube protein	tail	E5E3U9	Burkholderia_phage	56.8	5.5e-53
WP_151054600.1|1621525_1622698_-|tail	phage tail sheath protein	tail	A0A2H4JCP8	uncultured_Caudovirales_phage	71.0	2.3e-163
WP_151054602.1|1622813_1623413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054604.1|1623497_1623740_-	hypothetical protein	NA	M4QQ81	Salicola_phage	71.4	1.3e-25
WP_151054606.1|1623727_1624192_-	hypothetical protein	NA	E4WLU1	Ostreococcus_tauri_virus	44.3	6.6e-05
WP_151054608.1|1624202_1625135_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	45.0	9.7e-32
WP_151054610.1|1625136_1625748_-|tail	phage tail protein I	tail	A4JWT0	Burkholderia_virus	53.4	6.3e-48
WP_151054612.1|1625740_1626646_-|plate	baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	58.1	5.1e-86
WP_151054615.1|1626642_1626990_-	hypothetical protein	NA	V9IQW0	Stenotrophomonas_phage	56.0	7.5e-22
WP_151054617.1|1626986_1627496_-|plate	phage baseplate assembly protein V	plate	A0A2H4JFJ8	uncultured_Caudovirales_phage	38.0	1.3e-22
WP_151054619.1|1627567_1628326_-	DNA adenine methylase	NA	A2I2Y7	Vibrio_virus	57.8	2.2e-90
WP_151054621.1|1628285_1628468_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_151054623.1|1628666_1629110_-	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	51.3	7.6e-35
WP_151054625.1|1629102_1629540_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	48.8	3.3e-30
WP_151054627.1|1629629_1630052_-	hypothetical protein	NA	Q9ZXL5	Pseudomonas_virus	33.6	4.0e-09
WP_151054629.1|1630048_1630921_-	DUF3380 domain-containing protein	NA	A0A2H4JGJ9	uncultured_Caudovirales_phage	52.3	5.8e-71
WP_151054631.1|1630857_1631157_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_151054633.1|1631153_1631504_-	hypothetical protein	NA	E5E3W4	Burkholderia_phage	55.4	9.9e-22
WP_151054635.1|1631514_1631727_-|tail	phage tail protein	tail	A0A2H4J946	uncultured_Caudovirales_phage	62.1	6.9e-18
WP_151054637.1|1631726_1632191_-|head	head completion/stabilization protein	head	Q9ZXM1	Pseudomonas_virus	46.1	2.5e-28
WP_151054639.1|1632285_1632957_-|terminase	terminase	terminase	A4JWP8	Burkholderia_virus	47.4	8.0e-44
WP_151054641.1|1632995_1634012_-|capsid	phage major capsid protein, P2 family	capsid	E5FFI6	Burkholderia_phage	62.3	3.6e-112
WP_151054643.1|1634066_1634897_-|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	44.9	1.1e-53
WP_151054645.1|1635063_1636836_+|terminase	terminase ATPase subunit family protein	terminase	A0A077K8Q7	Ralstonia_phage	64.0	3.4e-219
WP_151054647.1|1636835_1637855_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	71.3	3.2e-137
WP_151054649.1|1637945_1638182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151054651.1|1639207_1639681_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
1638957:1639001	attR	TGGTAGGACTAGGCGGACTCGAACCGCCGACCCCCACCATGTCAA	NA	NA	NA	NA
>prophage 5
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	1673066	1680649	4129232	protease	Caulobacter_phage(50.0%)	9	NA	NA
WP_151054716.1|1673066_1674278_+	hypothetical protein	NA	A0A172Q0Y1	Acinetobacter_phage	33.1	3.8e-20
WP_151054718.1|1674274_1675045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151054720.1|1675047_1676151_+|protease	cysteine protease StiP family protein	protease	A0A172Q0S8	Acinetobacter_phage	33.4	3.8e-43
WP_151054721.1|1676151_1677117_+	malyl-CoA thiolesterase	NA	NA	NA	NA	NA
WP_151054723.1|1677238_1677832_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	37.3	9.9e-14
WP_151054725.1|1677879_1678332_+	tellurite resistance TerB family protein	NA	A0A1B2IBD1	Erwinia_phage	32.8	1.4e-12
WP_151054727.1|1678397_1679375_+	calcium/sodium antiporter	NA	NA	NA	NA	NA
WP_151054729.1|1679413_1679995_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	42.3	3.8e-34
WP_151054731.1|1680070_1680649_+	TerD family protein	NA	K4JRX3	Caulobacter_phage	45.9	3.8e-34
>prophage 6
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	2329781	2339988	4129232		Bacillus_phage(16.67%)	8	NA	NA
WP_151055883.1|2329781_2330741_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	38.8	2.4e-25
WP_151055885.1|2330751_2331384_+	endonuclease III	NA	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	27.5	6.2e-14
WP_151055887.1|2331681_2331945_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	G9IAA2	Pseudomonas_phage	48.4	2.7e-11
WP_151055889.1|2331953_2333084_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A191ZBY3	Erwinia_phage	66.6	3.4e-148
WP_151055891.1|2333153_2335418_-	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	67.9	1.4e-310
WP_151055893.1|2336025_2337378_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_151055895.1|2337430_2338291_+	small-conductance mechanosensitive channel MscS	NA	NA	NA	NA	NA
WP_151055897.1|2338347_2339988_-	acyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	26.9	1.0e-31
>prophage 7
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	3378847	3388037	4129232	tRNA	uncultured_Mediterranean_phage(66.67%)	7	NA	NA
WP_151057572.1|3378847_3381235_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	32.1	4.1e-66
WP_151057575.1|3381328_3382255_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	36.4	1.2e-34
WP_151057577.1|3382264_3384118_-	protein translocase subunit SecD	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	24.0	8.2e-06
WP_151057579.1|3384183_3384513_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.0	2.2e-10
WP_151059260.1|3384549_3385680_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	49.0	2.7e-92
WP_151057581.1|3385694_3386744_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_151057583.1|3387008_3388037_-	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	27.3	3.6e-11
>prophage 8
NZ_CP044222	Nitrincola sp. KXZD1103 chromosome, complete genome	4129232	4059808	4080963	4129232	transposase,integrase	Tupanvirus(25.0%)	23	4065131:4065143	4083654:4083666
WP_151057091.1|4059808_4061380_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_151058723.1|4061530_4061740_-	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_151056215.1|4062736_4064275_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_151058725.1|4064706_4065297_-	class GN sortase	NA	NA	NA	NA	NA
4065131:4065143	attL	GGCCAGGGTTTTA	NA	NA	NA	NA
WP_151058728.1|4065293_4067363_-	marine proteobacterial sortase target protein	NA	A0A2K9L4P5	Tupanvirus	22.0	5.9e-21
WP_151058729.1|4067577_4068246_+	two-component system response regulator CreB	NA	W8CYM9	Bacillus_phage	34.7	1.6e-28
WP_151058731.1|4068242_4069688_+	two-component system sensor histidine kinase CreC	NA	Q8QKV7	Ectocarpus_siliculosus_virus	24.8	6.6e-11
WP_151058733.1|4069824_4070094_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_151058735.1|4070083_4070347_-	BrnT family toxin	NA	NA	NA	NA	NA
WP_023012140.1|4070463_4070757_-	HigA family addiction module antidote protein	NA	I6ZVM3	Aeromonas_phage	49.5	9.5e-18
WP_151058737.1|4071037_4071259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151058739.1|4071251_4071542_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_151058741.1|4071688_4072732_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_151058743.1|4073285_4073771_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_151058745.1|4073901_4074270_-	DUF3703 domain-containing protein	NA	NA	NA	NA	NA
WP_151054447.1|4074484_4076056_-|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_151058747.1|4076200_4076602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151058749.1|4076699_4077044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151058751.1|4077163_4077595_-	acetyltransferase	NA	NA	NA	NA	NA
WP_151058753.1|4078375_4078798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151058755.1|4078849_4079581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151058757.1|4079474_4080077_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_151058759.1|4080459_4080963_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
4083654:4083666	attR	GGCCAGGGTTTTA	NA	NA	NA	NA
>prophage 1
NZ_CP044223	Nitrincola sp. KXZD1103 plasmid unnamed1, complete sequence	43759	0	15288	43759		Moraxella_phage(25.0%)	15	NA	NA
WP_014579484.1|4804_5176_-	conjugal transfer transcriptional regulator TraJ	NA	NA	NA	NA	NA
WP_014579483.1|5524_5956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014579482.1|5955_6681_+	conjugal transfer protein TraL	NA	NA	NA	NA	NA
WP_014579481.1|6680_7118_+	conjugal transfer protein TraM	NA	NA	NA	NA	NA
WP_020933270.1|7168_8491_-	phosphoribosyltransferase	NA	A0A0R6PHM5	Moraxella_phage	37.9	2.4e-39
WP_020933271.1|8518_8863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014579478.1|9024_10056_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_014579476.1|10423_11449_-	ParB/RepB/Spo0J family partition protein	NA	S5VSZ7	Leptospira_phage	29.5	9.7e-09
WP_014579475.1|11445_12204_-	ParA family protein	NA	A0A1V0DZZ0	Clostridioides_phage	26.8	9.7e-06
WP_041646701.1|12203_12500_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_014579473.1|12618_12969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041646699.1|13101_13338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014579471.1|13489_13744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151059390.1|13736_14813_-	klcB	NA	NA	NA	NA	NA
WP_014579469.1|14853_15288_-	antirestriction protein	NA	A9J566	Pseudomonas_phage	36.5	2.0e-16
>prophage 2
NZ_CP044223	Nitrincola sp. KXZD1103 plasmid unnamed1, complete sequence	43759	20014	20362	43759		Escherichia_phage(100.0%)	1	NA	NA
WP_041646692.1|20014_20362_-	single-stranded DNA-binding protein	NA	A0A088FRR2	Escherichia_phage	36.0	8.7e-10
>prophage 3
NZ_CP044223	Nitrincola sp. KXZD1103 plasmid unnamed1, complete sequence	43759	33050	33779	43759		Xanthomonas_phage(100.0%)	1	NA	NA
WP_014579502.1|33050_33779_+	conjugal transfer protein TraX	NA	A0A1W6DY89	Xanthomonas_phage	41.3	4.9e-31
>prophage 4
NZ_CP044223	Nitrincola sp. KXZD1103 plasmid unnamed1, complete sequence	43759	36981	41480	43759		Vibrio_phage(50.0%)	3	NA	NA
WP_014579493.1|36981_37842_+	3'-5' exonuclease	NA	K7RFY5	Vibrio_phage	39.8	3.5e-28
WP_014579491.1|38048_38303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014579490.1|38318_41480_-	DUF1738 domain-containing protein	NA	A0A1V0EBY3	Caulobacter_phage	35.8	2.9e-35
