The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	432223	485474	5940808	coat,protease,tRNA	Clostridium_phage(16.67%)	51	NA	NA
WP_039771777.1|432223_433243_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.9	1.0e-66
WP_023974832.1|433252_434254_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_039771779.1|434519_435749_+|protease	trypsin-like serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.7	5.2e-17
WP_011967729.1|435948_436257_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_039771782.1|436269_437424_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023974834.1|437580_438699_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_039771784.1|438827_439844_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_039771785.1|439845_440652_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_023974836.1|440707_441763_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_039771787.1|442082_443204_-	glycosyltransferase family 4 protein	NA	A0A1X9SJR9	Sulfolobus_islandicus_rod-shaped_virus	27.9	1.9e-05
WP_011967736.1|443312_444311_+|coat	CotS family spore coat protein	coat	NA	NA	NA	NA
WP_011967737.1|444473_445334_+	sporulation peptidase YabG	NA	NA	NA	NA	NA
WP_011967738.1|445572_446112_+	glutathione peroxidase	NA	NA	NA	NA	NA
WP_011967739.1|446727_446970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039771790.1|447424_448987_+	DUF3794 domain-containing protein	NA	S6BFI4	Thermus_phage	59.5	2.0e-05
WP_011967741.1|449316_450162_+	cyanophycinase	NA	NA	NA	NA	NA
WP_039771792.1|450133_452776_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_023974839.1|452924_453767_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_011967744.1|453830_454568_+	stage II sporulation protein R	NA	NA	NA	NA	NA
WP_011967745.1|454699_455116_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_023974841.1|455221_455530_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039773938.1|455694_457305_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.2	6.8e-150
WP_039772945.1|457613_459056_+	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_039772942.1|459097_460204_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
WP_023974844.1|460417_460627_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_017209894.1|460816_461401_+	thymidine kinase	NA	A0A249XXF6	Clostridium_phage	55.3	6.7e-55
WP_039772940.1|461426_463187_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	A0A0K2CP67	Brevibacillus_phage	28.1	1.2e-06
WP_011967753.1|463322_464405_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_011967754.1|464470_465058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017209891.1|465113_466163_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	35.4	3.3e-44
WP_023974847.1|466213_466663_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA	NA
WP_039772938.1|466973_467603_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011967758.1|467684_468179_+	cytidine deaminase	NA	A0A2H5BMD7	Streptomyces_phage	39.4	3.0e-16
WP_023974848.1|468458_469607_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	27.0	2.0e-26
WP_023974849.1|469728_470910_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_023974850.1|471629_471995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077723628.1|471987_472677_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_017209887.1|472731_472947_+	ATP synthase F0 subunit C	NA	NA	NA	NA	NA
WP_023974852.1|472999_473479_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_011967764.1|473481_474021_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_011967765.1|474031_475546_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_011967766.1|475587_476439_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_011967767.1|476453_477845_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_011967768.1|477860_478268_+	ATP synthase F1 subunit epsilon	NA	NA	NA	NA	NA
WP_011967769.1|478482_479133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023974853.1|479294_480557_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_011967771.1|481157_482216_+	stage II sporulation protein D	NA	Q2XU88	Pseudomonas_phage	35.1	3.0e-37
WP_023974854.1|482656_483394_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_011967773.1|483501_483756_+	sporulation transcriptional regulator SpoIIID	NA	M9Q261	Clostridium_phage	56.4	5.7e-19
WP_011967774.1|483835_484870_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_023974855.1|484937_485474_-|protease	spore protease YyaC	protease	NA	NA	NA	NA
>prophage 2
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	1052501	1058123	5940808	transposase	Clostridium_phage(88.89%)	9	NA	NA
WP_154862475.1|1052501_1054073_+|transposase	IS1182 family transposase	transposase	Q9MBP7	Staphylococcus_prophage	34.0	4.3e-64
WP_039773926.1|1054473_1054809_-	helix-turn-helix transcriptional regulator	NA	A0A1L2BY72	Clostridium_phage	73.9	5.4e-41
WP_039773924.1|1054961_1055174_+	helix-turn-helix domain-containing protein	NA	A0A1L2BY74	Clostridium_phage	64.3	1.2e-17
WP_039773923.1|1055212_1055644_+	helix-turn-helix transcriptional regulator	NA	A0A1L2BY71	Clostridium_phage	88.1	2.4e-65
WP_167514407.1|1055700_1055865_+	hypothetical protein	NA	A0A1L2BY76	Clostridium_phage	88.9	1.6e-19
WP_084670618.1|1055900_1056200_+	hypothetical protein	NA	A0A1L2BY79	Clostridium_phage	77.8	1.3e-22
WP_011968234.1|1056290_1056473_+	hypothetical protein	NA	A0A1L2BY78	Clostridium_phage	86.4	3.3e-21
WP_039773922.1|1056520_1057354_+	helix-turn-helix domain-containing protein	NA	A0A1L2BY83	Clostridium_phage	55.5	2.2e-67
WP_039773921.1|1057346_1058123_+	hypothetical protein	NA	A0A1L2BY85	Clostridium_phage	56.3	1.4e-71
>prophage 3
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	1063839	1072426	5940808	transposase	Paenibacillus_phage(33.33%)	12	NA	NA
WP_084670616.1|1063839_1064190_-|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	59.6	3.6e-24
WP_039773913.1|1064202_1065681_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	48.9	1.2e-111
WP_084670614.1|1066206_1066821_-|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	49.0	1.1e-26
WP_023973955.1|1066922_1067081_-	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	60.0	6.9e-07
WP_023973953.1|1067407_1067581_+	hypothetical protein	NA	S6B9W8	Thermus_phage	59.5	6.4e-06
WP_023973952.1|1067773_1068628_+	YitT family protein	NA	NA	NA	NA	NA
WP_039773912.1|1068731_1068968_+	hemolysin XhlA family protein	NA	Q0SPG4	Clostridium_phage	44.7	1.1e-11
WP_039773911.1|1068983_1069379_+	hypothetical protein	NA	M9Q2G0	Clostridium_phage	56.1	3.7e-25
WP_039773910.1|1069448_1070234_+	glycoside hydrolase	NA	Q0SPG7	Clostridium_phage	42.9	1.2e-35
WP_039773909.1|1070697_1071120_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011968276.1|1071147_1071624_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_017209855.1|1071658_1072426_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.3	3.2e-33
>prophage 4
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	1217928	1228156	5940808		Cyanophage(28.57%)	7	NA	NA
WP_039770444.1|1217928_1221675_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.6	1.3e-29
WP_017210869.1|1222104_1222584_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.4	5.9e-25
WP_011968398.1|1222583_1223291_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	43.8	2.4e-46
WP_039770442.1|1223548_1224964_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.5	7.8e-57
WP_011968400.1|1225033_1226035_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	44.5	2.2e-66
WP_039770439.1|1226022_1226634_+	phosphoribosylglycinamide formyltransferase	NA	R9S626	Prochlorococcus_phage	36.2	1.0e-21
WP_039770437.1|1226647_1228156_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	45.0	2.0e-34
>prophage 5
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	2472234	2476717	5940808		Clostridium_virus(16.67%)	6	NA	NA
WP_012058440.1|2472234_2472594_-	helix-turn-helix transcriptional regulator	NA	B6SBW8	Clostridium_virus	40.4	1.0e-13
WP_023975159.1|2472912_2473110_+	DUF739 family protein	NA	A0A0A7RTP5	Clostridium_phage	53.3	1.2e-08
WP_023975158.1|2473599_2474961_+	replisome organizer region-containing protein	NA	A8ASN4	Listeria_phage	51.7	1.1e-28
WP_031275900.1|2475010_2475637_+	ATP-binding protein	NA	A0A0K2CPA5	Brevibacillus_phage	39.5	3.6e-30
WP_012058444.1|2475750_2475993_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	48.6	2.7e-10
WP_023975156.1|2476408_2476717_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	44.9	7.4e-13
>prophage 6
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	3634003	3642401	5940808		Clostridium_phage(28.57%)	10	NA	NA
WP_039773558.1|3634003_3634246_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	48.6	2.6e-13
WP_154861642.1|3635019_3635820_-	ATP-binding protein	NA	Q0H276	Geobacillus_phage	41.2	8.1e-35
WP_039773556.1|3636939_3637710_-	DNA recombination protein RecT	NA	A0A0A7RW37	Clostridium_phage	52.4	2.6e-67
WP_039773554.1|3637769_3638684_-	hypothetical protein	NA	A0A0A7RWR9	Clostridium_phage	57.0	2.1e-103
WP_023973792.1|3639033_3639246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051144914.1|3639463_3639976_+	helix-turn-helix transcriptional regulator	NA	Q786F1	Bacillus_phage	34.6	7.5e-10
WP_031275648.1|3640152_3640596_+	ImmA/IrrE family metallo-endopeptidase	NA	Q9T201	Bacillus_phage	38.9	7.2e-17
WP_039773552.1|3640658_3640946_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039773551.1|3640971_3641166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039773550.1|3641561_3642401_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A067ZJB6	Vibrio_phage	27.5	5.3e-05
>prophage 7
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	3843747	3856287	5940808	terminase,plate,tail	Clostridium_phage(81.82%)	15	NA	NA
WP_039769254.1|3843747_3843981_-	hemolysin XhlA family protein	NA	A0A0A7S0T7	Clostridium_phage	50.6	2.1e-15
WP_039769252.1|3844143_3844341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039769249.1|3844342_3844792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039769245.1|3845937_3846720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039769242.1|3846737_3847391_-|tail	phage tail protein	tail	A0A0A7RTP0	Clostridium_phage	57.6	4.2e-50
WP_039769239.1|3847392_3848097_-	YmfQ family protein	NA	A0A2H4J1P4	uncultured_Caudovirales_phage	37.5	8.1e-31
WP_039769237.1|3848089_3849196_-|plate	baseplate J/gp47 family protein	plate	A0A0A7RUN3	Clostridium_phage	35.9	7.2e-50
WP_039769234.1|3849188_3849629_-	DUF2634 domain-containing protein	NA	A0A0A7S0E2	Clostridium_phage	45.5	4.6e-24
WP_012059569.1|3849621_3849945_-	DUF2577 domain-containing protein	NA	NA	NA	NA	NA
WP_039769231.1|3849944_3850949_-	hypothetical protein	NA	A0A0A7RTP6	Clostridium_phage	37.3	1.0e-58
WP_039769229.1|3850945_3851425_-	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	33.3	9.1e-18
WP_069187745.1|3851438_3853643_-	hypothetical protein	NA	A0A142KC22	Gordonia_phage	34.6	4.8e-29
WP_039769227.1|3853848_3854253_-	XkdN-like protein	NA	A0A0A7RTP2	Clostridium_phage	49.2	2.2e-28
WP_012059574.1|3854721_3855153_-|tail	phage tail tube protein	tail	A0A0A7RVT1	Clostridium_phage	58.1	3.8e-39
WP_039769225.1|3855165_3856287_-|terminase	terminase	terminase	A0A0A7S0D2	Clostridium_phage	46.5	2.7e-84
>prophage 8
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	4312655	4321845	5940808	transposase	Paenibacillus_phage(33.33%)	7	NA	NA
WP_051144954.1|4312655_4314254_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	29.5	3.8e-52
WP_039773735.1|4314258_4314981_+	response regulator transcription factor	NA	A0A2R2ZGH8	Clostridioides_phage	25.7	3.5e-13
WP_039773734.1|4315154_4316381_+	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_011968065.1|4316669_4317350_+	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	49.1	7.3e-53
WP_167514426.1|4317652_4318162_+|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	56.7	1.8e-51
WP_039768479.1|4318310_4319729_-	sigma-54-dependent Fis family transcriptional regulator	NA	Q6XM27	Feldmannia_irregularis_virus	25.5	5.3e-05
WP_031276040.1|4319874_4321845_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	5.3e-11
>prophage 9
NZ_CP043998	Clostridium diolis strain DSM 15410 chromosome, complete genome	5940808	5638421	5647906	5940808	integrase	Clostridium_phage(37.5%)	14	5639017:5639032	5655959:5655974
WP_084670569.1|5638421_5639138_-	hypothetical protein	NA	A0A1L2BY85	Clostridium_phage	54.1	7.2e-59
5639017:5639032	attL	GCATAAAACTTATCCA	NA	NA	NA	NA
WP_009168792.1|5639272_5639497_+	DUF1659 domain-containing protein	NA	NA	NA	NA	NA
WP_009168791.1|5639540_5639759_+	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
WP_039773051.1|5640668_5641061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039773053.1|5641062_5641305_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	52.7	9.9e-13
WP_039773055.1|5641417_5642044_-	ATP-binding protein	NA	A0A0K2CPA5	Brevibacillus_phage	39.0	2.3e-29
WP_039773057.1|5642093_5643383_-	phage replisome organizer	NA	V5UQV4	Oenococcus_phage	50.9	1.4e-25
WP_051144884.1|5643524_5643755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008423918.1|5643773_5643995_-	helix-turn-helix domain-containing protein	NA	A0A2I7SCU5	Paenibacillus_phage	51.5	5.5e-10
WP_039773062.1|5644111_5644336_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_039773064.1|5644588_5644963_+	helix-turn-helix transcriptional regulator	NA	A0A090D830	Clostridium_phage	37.3	2.0e-12
WP_023975313.1|5645158_5645335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039773065.1|5645318_5646476_+|integrase	site-specific integrase	integrase	A0A0A8WIF9	Clostridium_phage	51.7	7.9e-108
WP_039773066.1|5646541_5647906_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	41.9	2.2e-101
5655959:5655974	attR	TGGATAAGTTTTATGC	NA	NA	NA	NA
