assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008694105.1_ASM869410v1	NZ_CP041364	Lactobacillus harbinensis strain NSMJ42 chromosome, complete genome	1	295784-295890	1	CRISPRCasFinder	no		cas3,cas14j,DEDDh,DinG,csa3,c2c9_V-U4,Cas14u_CAS-V,c2c10_CAS-V-U3,cas9,cas1,cas2,csn2	Orphan	CTAACCGGGCTCAGGCGACCAGAAG	25	0	0	NA	NA	NA	2	2	Orphan	cas3,cas14j,DEDDh,DinG,csa3,c2c9_V-U4,Cas14u_CAS-V,c2c10_CAS-V-U3,cas9,cas1,cas2,csn2	NA,NA	NA|487aa|up_9|NZ_CP041364.1_286086_287547_+	COG3595, COG3595, Uncharacterized conserved protein [Function unknown]	NA|96aa|up_8|NZ_CP041364.1_287570_287858_+	pfam04024, PspC, PspC domain	NA|99aa|up_7|NZ_CP041364.1_287860_288157_+	PRK06041, PRK06041, archaellar assembly protein FlaJ	NA|316aa|up_6|NZ_CP041364.1_288285_289233_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|281aa|up_5|NZ_CP041364.1_289260_290103_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|344aa|up_4|NZ_CP041364.1_290092_291124_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|281aa|up_3|NZ_CP041364.1_291148_291991_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|318aa|up_2|NZ_CP041364.1_292065_293019_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|575aa|up_1|NZ_CP041364.1_293230_294955_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|216aa|up_0|NZ_CP041364.1_295124_295772_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|670aa|down_0|NZ_CP041364.1_296120_298130_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|963aa|down_1|NZ_CP041364.1_298134_301023_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|297aa|down_2|NZ_CP041364.1_301348_302239_+	PRK05416, PRK05416, RNase adapter RapZ	NA|348aa|down_3|NZ_CP041364.1_302235_303279_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|321aa|down_4|NZ_CP041364.1_303283_304246_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|157aa|down_5|NZ_CP041364.1_304250_304721_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|199aa|down_6|NZ_CP041364.1_304808_305405_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|346aa|down_7|NZ_CP041364.1_306266_307304_+	pfam04198, Sugar-bind, Putative sugar-binding domain	NA|341aa|down_8|NZ_CP041364.1_307342_308365_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|404aa|down_9|NZ_CP041364.1_308467_309679_+	PRK00073, pgk, phosphoglycerate kinase; Provisional
GCF_008694105.1_ASM869410v1	NZ_CP041364	Lactobacillus harbinensis strain NSMJ42 chromosome, complete genome	2	870814-870918	2	CRISPRCasFinder	no	cas14j,DinG	cas3,cas14j,DEDDh,DinG,csa3,c2c9_V-U4,Cas14u_CAS-V,c2c10_CAS-V-U3,cas9,cas1,cas2,csn2	Unclear	GTTTAAGTTGGTTAAAGCGCTGCAACC	27	0	0	NA	NA	NA	1	1	TypeV	cas3,cas14j,DEDDh,DinG,csa3,c2c9_V-U4,Cas14u_CAS-V,c2c10_CAS-V-U3,cas9,cas1,cas2,csn2	NA|99aa|up_8|NZ_CP041364.1_850289_850586_-,NA	NA|717aa|up_9|NZ_CP041364.1_848039_850190_-	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|99aa|up_8|NZ_CP041364.1_850289_850586_-	NA	NA|386aa|up_7|NZ_CP041364.1_851097_852255_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|413aa|up_6|NZ_CP041364.1_853658_854897_+	cd15488, Tm-1-like, ATP-binding domain found in plant Tm-1-like (Tm-1L) and similar proteins	NA|277aa|up_5|NZ_CP041364.1_854896_855727_+	pfam09370, PEP_hydrolase, Phosphoenolpyruvate hydrolase-like	NA|431aa|up_4|NZ_CP041364.1_855960_857253_-	smart00812, Alpha_L_fucos, Alpha-L-fucosidase	NA|1067aa|up_3|NZ_CP041364.1_857528_860729_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	cas14j|402aa|up_2|NZ_CP041364.1_860783_861989_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|457aa|up_1|NZ_CP041364.1_862347_863718_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|1083aa|up_0|NZ_CP041364.1_864386_867635_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|218aa|down_0|NZ_CP041364.1_871980_872634_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|214aa|down_1|NZ_CP041364.1_872649_873291_-	COG3935, DnaD, Putative primosome component and related proteins [DNA replication, recombination, and repair]	NA|435aa|down_2|NZ_CP041364.1_873502_874807_-	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|157aa|down_3|NZ_CP041364.1_874840_875311_-	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown]	DinG|931aa|down_4|NZ_CP041364.1_875382_878175_-	PRK08074, PRK08074, bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated	NA|1249aa|down_5|NZ_CP041364.1_878178_881925_-	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|1266aa|down_6|NZ_CP041364.1_881917_885715_-	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|315aa|down_7|NZ_CP041364.1_885762_886707_+	TIGR00549, Mevalonate_kinase, mevalonate kinase	NA|336aa|down_8|NZ_CP041364.1_886703_887711_+	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism]	NA|351aa|down_9|NZ_CP041364.1_887710_888763_+	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional
GCF_008694105.1_ASM869410v1	NZ_CP041364	Lactobacillus harbinensis strain NSMJ42 chromosome, complete genome	3	1945760-1947250	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	cas3,cas14j,DEDDh,DinG,csa3,c2c9_V-U4,Cas14u_CAS-V,c2c10_CAS-V-U3,cas9,cas1,cas2,csn2	Type II-B,Type II-A,Type II-C	GCTTCAGAAGTACGTCAAATCAGTAAGGTCAGTA,GCTTCAGAAGTACGTCAAATCAGTAAGGTCAGTACC,GCTTCAGAAGTACGTCAAATCAGTAAGGTCAGTACC	34,36,36	0	0	NA	NA	NA:NA:NA	21,22,22	22	TypeII-B,TypeII-A,TypeII-C	cas3,cas14j,DEDDh,DinG,csa3,c2c9_V-U4,Cas14u_CAS-V,c2c10_CAS-V-U3,cas9,cas1,cas2,csn2	NA|65aa|up_9|NZ_CP041364.1_1937373_1937568_-,NA	NA|65aa|up_9|NZ_CP041364.1_1937373_1937568_-	NA	cas9|151aa|up_8|NZ_CP041364.1_1937663_1938116_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|258aa|up_7|NZ_CP041364.1_1938213_1938987_-	PRK06526, PRK06526, transposase; Provisional	NA|405aa|up_6|NZ_CP041364.1_1938992_1940207_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas9|498aa|up_5|NZ_CP041364.1_1940251_1941745_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|457aa|up_4|NZ_CP041364.1_1941873_1943244_+	pfam13546, DDE_5, DDE superfamily endonuclease	cas9|130aa|up_3|NZ_CP041364.1_1943277_1943667_+	pfam16595, Cas9_PI, PAM-interacting domain of CRISPR-associated endonuclease Cas9	cas1|303aa|up_2|NZ_CP041364.1_1943876_1944785_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|102aa|up_1|NZ_CP041364.1_1944762_1945068_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|226aa|up_0|NZ_CP041364.1_1945064_1945742_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|654aa|down_0|NZ_CP041364.1_1947468_1949430_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|493aa|down_1|NZ_CP041364.1_1949448_1950927_+	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|329aa|down_2|NZ_CP041364.1_1950937_1951924_+	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs	NA|228aa|down_3|NZ_CP041364.1_1951977_1952661_-	COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair]	NA|353aa|down_4|NZ_CP041364.1_1952937_1953996_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|77aa|down_5|NZ_CP041364.1_1954342_1954573_+	TIGR03715, cell_surface_protein_precursor, KxYKxGKxW signal peptide	NA|1062aa|down_6|NZ_CP041364.1_1954472_1957658_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|315aa|down_7|NZ_CP041364.1_1957756_1958701_-	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed	NA|392aa|down_8|NZ_CP041364.1_1958697_1959873_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|289aa|down_9|NZ_CP041364.1_1960053_1960920_+	COG0583, LysR, Transcriptional regulator [Transcription]
