The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 2
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	224501	307938	3637766	transposase,tRNA	Stx2-converting_phage(14.29%)	51	NA	NA
WP_150349897.1|224501_227033_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	38.4	1.9e-154
WP_028719544.1|227099_227549_-	DUF3576 domain-containing protein	NA	NA	NA	NA	NA
WP_150349898.1|227957_229025_+	porin	NA	NA	NA	NA	NA
WP_150349899.1|229091_229754_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_150351765.1|229935_230799_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_028719540.1|230941_231211_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_150349901.1|231431_232061_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_150349903.1|232089_232776_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_099648512.1|232927_235555_+	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	37.4	1.9e-120
WP_028719536.1|235684_237319_+	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA	NA
WP_150349904.1|237397_238294_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_150349906.1|238293_238950_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_150351766.1|244795_246565_-	recombinase family protein	NA	R9TP69	Rhizobium_phage	35.5	1.3e-77
WP_150349907.1|247382_248300_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349909.1|248299_248686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351767.1|248689_250792_-	AAA family ATPase	NA	E5EQ50	Micromonas_sp._RCC1109_virus	32.2	2.7e-29
WP_150349910.1|251293_252370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349912.1|252526_253063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349913.1|253178_253358_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_150349915.1|253827_255651_+	DUF927 domain-containing protein	NA	NA	NA	NA	NA
WP_150349848.1|256417_257556_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	32.2	8.5e-22
WP_150351768.1|257975_258428_+	hypothetical protein	NA	A0A1D8KSS5	Synechococcus_phage	46.9	2.9e-34
WP_150349916.1|259334_260114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349917.1|260153_269744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349918.1|269715_275148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349920.1|276284_278447_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_150349921.1|279642_279921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349922.1|280436_281729_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_150351769.1|281725_283888_-	EVE domain-containing protein	NA	K4I1H4	Acidithiobacillus_phage	35.4	1.3e-39
WP_150349924.1|284021_285359_-	DNA-processing protein DprA	NA	NA	NA	NA	NA
WP_150349925.1|285360_287460_-	RecQ family ATP-dependent DNA helicase	NA	F2NZ48	Diadromus_pulchellus_ascovirus	34.2	2.2e-39
WP_130992038.1|287603_287930_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_150349926.1|287940_288663_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_150349927.1|289791_290316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071016091.1|290969_291227_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_150349929.1|291223_291607_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_150349930.1|291842_293690_+	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_150349530.1|293728_294634_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	3.2e-88
WP_099648849.1|294666_295605_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.2	4.0e-33
WP_150349462.1|295798_296128_-|transposase	transposase	transposase	B6ETC4	Enterobacteria_phage	57.1	7.2e-22
WP_150349931.1|296157_297783_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.4	5.0e-100
WP_009803441.1|297843_298194_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	53.3	1.6e-27
WP_150349933.1|298190_298604_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_150351770.1|298711_299656_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150349934.1|299786_301775_+	IncP-type conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_150351771.1|301758_302259_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_150349936.1|302326_302782_+	DUF3788 family protein	NA	NA	NA	NA	NA
WP_150349937.1|302962_303958_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
WP_150349939.1|303954_304287_+	conjugal transfer protein TrbC	NA	NA	NA	NA	NA
WP_150349940.1|304286_304568_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_150349941.1|306654_307938_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	38.8	5.7e-14
>prophage 3
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	499625	587385	3637766	integrase,transposase,holin,protease,tRNA	Wolbachia_phage(11.11%)	83	545686:545704	577232:577250
WP_150350079.1|499625_502718_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	32.4	1.6e-118
WP_150351780.1|502763_503444_-	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
WP_028721201.1|503460_504024_-	DUF4202 domain-containing protein	NA	NA	NA	NA	NA
WP_150350080.1|504117_504618_+	NnrU family protein	NA	NA	NA	NA	NA
WP_150350081.1|504601_505630_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150350082.1|505676_506354_+|tRNA	tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD	tRNA	NA	NA	NA	NA
WP_150350083.1|506327_507047_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_112887975.1|507164_508433_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	NA	NA	NA	NA
WP_080621656.1|508480_509437_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_150350084.1|509511_509946_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_028721193.1|509949_510201_-	molybdopterin converting factor subunit 1	NA	NA	NA	NA	NA
WP_028721192.1|510190_510820_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_150350085.1|510942_511620_+	ZinT/AdcA family metal-binding protein	NA	NA	NA	NA	NA
WP_150350086.1|511650_513519_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_150350087.1|513933_514743_-	S49 family peptidase	NA	NA	NA	NA	NA
WP_150350088.1|514780_515674_-	ribokinase	NA	NA	NA	NA	NA
WP_150350089.1|515819_517319_-	cytochrome c1	NA	NA	NA	NA	NA
WP_028721186.1|517330_518653_-	cytochrome b	NA	NA	NA	NA	NA
WP_028721185.1|518663_519236_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_088217434.1|519780_519996_-	helix-turn-helix domain-containing protein	NA	H2DE65	Erwinia_phage	62.5	1.6e-17
WP_088217425.1|520598_521084_-	peptide methionine sulfoxide reductase	NA	NA	NA	NA	NA
WP_088217424.1|521086_521419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088217433.1|521448_521943_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_150349941.1|523033_524317_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	38.8	5.7e-14
WP_088217423.1|525048_525315_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088217422.1|525316_525592_-	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	50.0	7.8e-14
WP_088217421.1|525731_526091_-	response regulator	NA	NA	NA	NA	NA
WP_150350090.1|526108_526666_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_120444783.1|526655_527781_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_150351781.1|527785_528142_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_088217340.1|528553_529561_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_088217341.1|529626_529929_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_088217342.1|530121_531090_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_088217343.1|531116_531647_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_088217344.1|531859_532762_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150350091.1|532758_532959_-	DUF2274 domain-containing protein	NA	NA	NA	NA	NA
WP_150350092.1|532955_534142_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	44.8	8.3e-52
WP_120444783.1|534287_535413_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_088217362.1|536043_536931_-	replication initiator protein A	NA	NA	NA	NA	NA
WP_039187922.1|536942_537227_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_088217400.1|537353_537749_-	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_088217363.1|538234_538498_-	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_037520532.1|538618_538861_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_094514272.1|539046_539373_-	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_088217365.1|539935_540379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088217366.1|540371_540671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088217367.1|541002_541212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088217368.1|541225_541444_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088217369.1|541468_542395_-	DUF2493 domain-containing protein	NA	NA	NA	NA	NA
WP_088217370.1|542712_543747_-	DNA primase	NA	A0A2R4ALE6	Vibrio_phage	30.0	2.6e-09
WP_150350093.1|543998_545183_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
545686:545704	attL	CGGCGGCGAAGCGGTCGCG	NA	NA	NA	NA
WP_150349530.1|546698_547604_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	3.2e-88
WP_099648849.1|547636_548575_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.2	4.0e-33
WP_150349462.1|548768_549098_-|transposase	transposase	transposase	B6ETC4	Enterobacteria_phage	57.1	7.2e-22
WP_088217381.1|549803_551324_-	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_088217382.1|551238_551991_-	damage-inducible protein	NA	NA	NA	NA	NA
WP_088217383.1|552294_553080_+	DUF1837 domain-containing protein	NA	NA	NA	NA	NA
WP_088217384.1|553066_556591_+	DEAD/DEAH box helicase	NA	E3T5F3	Cafeteria_roenbergensis_virus	21.7	2.7e-05
WP_088217385.1|556692_559080_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_088217386.1|559076_560984_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_088217401.1|561042_561630_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_088217387.1|561698_562862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088217388.1|562885_564031_-	hypothetical protein	NA	J9Q803	Salmonella_phage	28.1	7.0e-32
WP_094513803.1|564119_565466_-	DUF1016 domain-containing protein	NA	Q9JMP5	Wolbachia_phage	55.6	2.0e-110
WP_088217391.1|565462_566704_-|integrase	site-specific integrase	integrase	A0A248SL35	Klebsiella_phage	67.6	2.3e-161
WP_150350094.1|566860_567553_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_150350095.1|567602_568760_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.9	7.9e-23
WP_028721182.1|568841_570758_-	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	52.6	4.8e-158
WP_028721181.1|570938_571760_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_028721180.1|571890_572688_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA	NA
WP_028721179.1|572692_573493_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_150350096.1|573485_574688_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_036763977.1|574834_575728_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	43.4	4.4e-58
WP_028721176.1|575730_576729_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	34.9	7.7e-43
WP_150350097.1|576718_577975_+	glycosyltransferase	NA	NA	NA	NA	NA
577232:577250	attR	CGCGACCGCTTCGCCGCCG	NA	NA	NA	NA
WP_081791498.1|577991_579017_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_036764028.1|579070_580720_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_150350098.1|580721_582116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028721171.1|582119_583061_-	DMT family transporter	NA	NA	NA	NA	NA
WP_150350099.1|583057_584101_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_028721169.1|584081_584762_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_150350100.1|584943_585888_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_099648683.1|585888_587385_+|holin	choline-sulfatase	holin	A0A1V0SA98	Catovirus	22.9	1.4e-16
>prophage 4
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	1136058	1142856	3637766		Acinetobacter_phage(50.0%)	8	NA	NA
WP_099649021.1|1136058_1137216_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	32.6	2.8e-44
WP_028718239.1|1137336_1138032_-	transcriptional repressor LexA	NA	E5DV74	Deep-sea_thermophilic_phage	37.8	4.0e-14
WP_150350370.1|1138135_1139317_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_028718237.1|1139326_1139797_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_150350371.1|1139793_1140585_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	51.4	3.9e-58
WP_150350372.1|1140581_1141244_-	uracil-DNA glycosylase	NA	G0ZLG1	Human_herpesvirus	47.6	4.6e-36
WP_150350373.1|1141240_1142269_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	39.5	1.3e-58
WP_028718233.1|1142265_1142856_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.4	3.0e-55
>prophage 5
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	1154787	1181910	3637766	capsid,portal,integrase,head,tail,terminase,protease	Rhodobacter_phage(16.67%)	38	1152779:1152795	1187468:1187484
1152779:1152795	attL	CTGGCTGGCCGAGGCCG	NA	NA	NA	NA
WP_150350382.1|1154787_1155879_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141GEZ3	Brucella_phage	29.7	4.2e-26
WP_150350383.1|1156019_1156388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350384.1|1156535_1156745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350385.1|1156902_1157655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350386.1|1157647_1157845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350387.1|1157844_1158039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350388.1|1158038_1158290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350389.1|1158289_1158934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350390.1|1158930_1159386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350391.1|1159382_1159697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350392.1|1159693_1159894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350393.1|1159890_1160733_-	ParB N-terminal domain-containing protein	NA	A0A0U2C144	Paracoccus_phage	62.1	1.1e-90
WP_150350394.1|1160729_1160969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350395.1|1160965_1161544_-	DNA methyltransferase	NA	F8TVB4	EBPR_siphovirus	49.8	8.4e-50
WP_150350396.1|1161547_1162030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350397.1|1162283_1162559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350398.1|1163098_1163428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350399.1|1163995_1164286_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_150350400.1|1164761_1165079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350401.1|1165075_1165378_+	hypothetical protein	NA	M4NJS1	Sulfitobacter_phage	52.8	4.1e-16
WP_150350402.1|1165374_1166517_+	hypothetical protein	NA	I3UM61	Rhodobacter_phage	52.0	1.3e-99
WP_150350403.1|1166509_1168348_+	hypothetical protein	NA	G8DGC0	Emiliania_huxleyi_virus	50.0	2.9e-152
WP_150351799.1|1168816_1169548_+	hypothetical protein	NA	I3ULZ3	Rhodobacter_phage	34.1	1.8e-17
WP_150350404.1|1169735_1170083_+	HNH endonuclease	NA	M4QRD8	Tetraselmis_viridis_virus	44.3	2.1e-08
WP_150350405.1|1170268_1170769_+	hypothetical protein	NA	I3ULZ5	Rhodobacter_phage	38.5	6.4e-14
WP_150350406.1|1170768_1172487_+|terminase	terminase large subunit	terminase	Q3HQS7	Burkholderia_phage	47.4	1.2e-136
WP_150350407.1|1172488_1173730_+|portal	phage portal protein	portal	M4QP41	Tetraselmis_viridis_virus	36.3	6.8e-65
WP_150350408.1|1173731_1174607_+|protease	Clp protease ClpP	protease	A0A0U4B0J0	Pseudomonas_phage	49.8	2.6e-58
WP_150350409.1|1174609_1175851_+|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	38.1	5.6e-59
WP_150350410.1|1175911_1176541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350411.1|1176537_1176906_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_150350412.1|1176907_1177234_+|head,tail	head-tail adaptor protein	head,tail	B4UTP9	Rhizobium_phage	35.8	4.0e-09
WP_150350413.1|1177230_1177617_+	DUF3168 domain-containing protein	NA	A0A141GEW7	Brucella_phage	38.7	4.9e-14
WP_150350414.1|1177798_1178329_+	HK97 gp10 family phage protein	NA	B4UTQ0	Rhizobium_phage	40.9	9.1e-19
WP_150350415.1|1178321_1178519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350416.1|1178520_1178982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350417.1|1178978_1179374_+	gene transfer agent family protein	NA	B4UTQ4	Rhizobium_phage	42.2	1.6e-15
WP_150350418.1|1179531_1181910_+	hypothetical protein	NA	A0A1B0T6I6	Pelagibaca_phage	35.7	3.4e-20
1187468:1187484	attR	CTGGCTGGCCGAGGCCG	NA	NA	NA	NA
>prophage 6
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	1354978	1406016	3637766	transposase	uncultured_virus(40.0%)	55	NA	NA
WP_150349448.1|1354978_1356168_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.9	1.1e-48
WP_150350516.1|1356496_1358164_-	recombinase family protein	NA	R9TP69	Rhizobium_phage	36.6	5.5e-86
WP_049768429.1|1358183_1358408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012092580.1|1358677_1358977_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_012092581.1|1358981_1359491_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_101754387.1|1359679_1360036_+	nuclease	NA	NA	NA	NA	NA
WP_120444783.1|1360228_1361355_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_012092646.1|1361470_1361935_-	signal peptidase II	NA	NA	NA	NA	NA
WP_012092647.1|1361960_1362704_-	cytochrome C biogenesis protein CcdA	NA	NA	NA	NA	NA
WP_012092648.1|1362703_1363324_-	SCO family protein	NA	NA	NA	NA	NA
WP_012092649.1|1363320_1363824_-	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_012092650.1|1363816_1364434_-	cation transporter	NA	NA	NA	NA	NA
WP_120443159.1|1364500_1366594_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	40.1	3.5e-122
WP_150350517.1|1366699_1367116_+	MerR family DNA-binding protein	NA	NA	NA	NA	NA
WP_012092653.1|1367123_1368059_-	bile acid:sodium symporter family protein	NA	NA	NA	NA	NA
WP_012092654.1|1368067_1368433_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012092655.1|1368861_1369860_+	P-type conjugative transfer ATPase TrbB	NA	NA	NA	NA	NA
WP_012092656.1|1369856_1370186_+	conjugal transfer protein TrbC	NA	NA	NA	NA	NA
WP_012092657.1|1370185_1370467_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_150350518.1|1370475_1372986_+	conjugal transfer protein TrbE	NA	NA	NA	NA	NA
WP_012092659.1|1372982_1373765_+	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA	NA
WP_012092660.1|1373781_1374069_+	putative entry exclusion protein TrbK-alt	NA	NA	NA	NA	NA
WP_012092661.1|1374072_1375431_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA	NA
WP_150350519.1|1375427_1376117_+	conjugal transfer protein TrbF	NA	NA	NA	NA	NA
WP_012092663.1|1376113_1377142_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA	NA
WP_012092664.1|1377138_1378266_+	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
WP_012092665.1|1378268_1378508_+	DUF2274 domain-containing protein	NA	NA	NA	NA	NA
WP_012092666.1|1378461_1379409_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_120444783.1|1379612_1380738_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_150350520.1|1381169_1382359_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.9	8.6e-49
WP_150350521.1|1382303_1383002_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	55.3	2.4e-14
WP_028034404.1|1383120_1383531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012092675.1|1383709_1384198_-	metal-binding protein	NA	NA	NA	NA	NA
WP_012092676.1|1384498_1386886_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	37.2	2.6e-89
WP_037092233.1|1386991_1387957_-	cation transporter	NA	A0A1V0SED0	Indivirus	37.6	1.8e-09
WP_012092678.1|1388026_1389535_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_028034406.1|1389608_1390004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028034407.1|1390083_1390545_+	cytochrome c	NA	NA	NA	NA	NA
WP_028034408.1|1390651_1390858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012092680.1|1390860_1391376_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_150350522.1|1391396_1391789_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349263.1|1391792_1393027_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
WP_012092682.1|1393753_1394017_-	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_012092683.1|1394069_1396628_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.5	3.9e-91
WP_012092684.1|1396787_1396982_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_012092685.1|1396996_1397401_+	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	42.2	4.8e-12
WP_028034411.1|1397860_1398136_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_028034412.1|1398193_1398922_+	glutaredoxin	NA	NA	NA	NA	NA
WP_012092688.1|1398944_1399448_+	DUF305 domain-containing protein	NA	NA	NA	NA	NA
WP_012092689.1|1399579_1400380_-	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_049768453.1|1400381_1402190_-	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_037092232.1|1402231_1402840_-	DsbA family protein	NA	NA	NA	NA	NA
WP_012092692.1|1403026_1403566_-	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_109707754.1|1403901_1404558_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_120444783.1|1404890_1406016_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	1601716	1657689	3637766	transposase,holin,integrase	Stx2-converting_phage(18.18%)	46	1593229:1593245	1635125:1635141
1593229:1593245	attL	GCGCGGCGCAAGGTTGA	NA	NA	NA	NA
WP_150350642.1|1601716_1603618_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_150349933.1|1603498_1603912_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_009803441.1|1603908_1604259_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	53.3	1.6e-27
WP_150349931.1|1604319_1605945_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	42.4	5.0e-100
WP_150350643.1|1605952_1606192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351809.1|1606504_1607845_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_150350644.1|1607834_1608095_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_150350645.1|1609126_1609612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350646.1|1609653_1613964_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
WP_150350647.1|1614281_1614461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350648.1|1614463_1614709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350649.1|1614736_1616623_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	46.0	1.9e-42
WP_150350650.1|1616641_1617721_-|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	33.3	1.4e-21
WP_150350651.1|1617724_1618597_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_150350652.1|1620192_1621185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350653.1|1621330_1622248_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150350654.1|1622328_1623330_-	membrane dipeptidase	NA	NA	NA	NA	NA
WP_150350655.1|1623348_1624419_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	37.9	2.0e-20
WP_150350656.1|1624430_1625246_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_081791309.1|1625242_1626151_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_120441246.1|1626194_1627259_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_028718946.1|1627393_1628314_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_028718945.1|1628317_1629214_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.8	1.7e-09
WP_028718944.1|1629387_1630110_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_150350657.1|1630196_1632272_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_028718942.1|1632273_1634055_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_028718941.1|1634145_1635645_+	nitrate reductase	NA	NA	NA	NA	NA
1635125:1635141	attR	TCAACCTTGCGCCGCGC	NA	NA	NA	NA
WP_081791308.1|1636011_1636164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350658.1|1636416_1637412_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
WP_150350659.1|1637379_1638279_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150350660.1|1638384_1639617_+	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_150351810.1|1639757_1641077_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.0	2.7e-67
WP_150350661.1|1641164_1641866_-	FCD domain-containing protein	NA	NA	NA	NA	NA
WP_080620435.1|1642054_1643131_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_051578028.1|1644336_1644978_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	1.1e-10
WP_150350662.1|1645076_1646126_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350663.1|1647210_1647462_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_112887237.1|1647465_1647894_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_150350664.1|1648396_1648807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349268.1|1648899_1650966_-	AAA family ATPase	NA	G8DDJ2	Micromonas_pusilla_virus	32.5	2.6e-24
WP_150350665.1|1652233_1652869_-	hypothetical protein	NA	NA	NA	NA	NA
WP_146113098.1|1653000_1653201_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_150350666.1|1653334_1654009_-	thermonuclease family protein	NA	A0A0R6PHV6	Moraxella_phage	33.3	4.9e-17
WP_150350667.1|1654281_1654830_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_150350668.1|1655454_1655655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350669.1|1656462_1657689_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	30.1	7.8e-29
>prophage 8
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	1685024	1835623	3637766	capsid,portal,integrase,head,tail,transposase,terminase,protease	Rhodobacter_phage(13.64%)	157	1688460:1688477	1837639:1837656
WP_150349848.1|1685024_1686163_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	32.2	8.5e-22
WP_150350683.1|1686680_1686968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350684.1|1687626_1688826_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
1688460:1688477	attL	TGATCTCGCCGATCTCGA	NA	NA	NA	NA
WP_150350685.1|1689649_1691578_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
1688460:1688477	attL	TGATCTCGCCGATCTCGA	NA	NA	NA	NA
WP_120441289.1|1691883_1692750_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_105291429.1|1692795_1694139_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_150350686.1|1694211_1695138_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_080620399.1|1695201_1695939_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA	NA
WP_028720942.1|1696076_1696310_+	acyl carrier protein	NA	A0A2I7RIC8	Vibrio_phage	40.8	3.9e-06
WP_028720941.1|1696452_1696926_+	DNA starvation/stationary phase protection protein Dps	NA	NA	NA	NA	NA
WP_120441295.1|1696987_1698064_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
1697191:1697208	attR	TGATCTCGCCGATCTCGA	NA	NA	NA	NA
WP_150350687.1|1698084_1698972_-	ABC transporter permease	NA	NA	NA	NA	NA
1697191:1697208	attR	TGATCTCGCCGATCTCGA	NA	NA	NA	NA
WP_028720938.1|1698968_1700042_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_150350688.1|1700028_1701663_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.5	1.5e-14
WP_150350689.1|1701621_1705092_+	DNA polymerase III subunit alpha	NA	R4TPF1	Streptomyces_phage	34.5	8.6e-166
WP_150350690.1|1705197_1706835_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	60.1	1.5e-173
WP_028720934.1|1706873_1707161_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	52.2	2.2e-19
WP_150350691.1|1707371_1708700_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_150351813.1|1708717_1709758_+	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_028720932.1|1709747_1710092_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
WP_150350692.1|1710132_1710777_+	DUF1345 domain-containing protein	NA	NA	NA	NA	NA
WP_112887221.1|1710841_1711762_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_150350693.1|1711778_1712648_+	TIGR01459 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_028720928.1|1712747_1713191_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_150350694.1|1713223_1714153_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_150350695.1|1714152_1714593_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_150350696.1|1714589_1715627_+	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_150350697.1|1715623_1716094_-	nicotinamide-nucleotide amidohydrolase family protein	NA	NA	NA	NA	NA
WP_099649376.1|1716090_1716588_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
WP_150350698.1|1716589_1717732_-	bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_150350699.1|1717869_1718592_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_150350700.1|1718588_1719989_+	glutathione-disulfide reductase	NA	NA	NA	NA	NA
WP_028720919.1|1720057_1721263_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_028720918.1|1721262_1722360_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_150351814.1|1722411_1723383_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_150350701.1|1723394_1725800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350702.1|1725808_1729135_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_080620381.1|1729289_1730462_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_150350703.1|1730776_1731424_+	TenA family transcriptional regulator	NA	NA	NA	NA	NA
WP_150350704.1|1731405_1732653_-	Hsp70 family protein	NA	NA	NA	NA	NA
WP_150350705.1|1732708_1734178_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_099649386.1|1734434_1735736_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_150350706.1|1735652_1736138_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_150350707.1|1736128_1736344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350708.1|1736642_1736888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350709.1|1736887_1737304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350710.1|1737711_1738404_-|tail	tail assembly protein	tail	V9QL88	Rhizobium_phage	32.5	5.9e-18
WP_150350711.1|1738400_1738652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350712.1|1739006_1739924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350713.1|1740082_1742653_-|tail	phage tail tape measure protein	tail	A0A291AUM6	Sinorhizobium_phage	49.8	2.6e-42
WP_150350714.1|1742670_1744305_-|terminase	terminase large subunit	terminase	Q6DMU3	Streptococcus_phage	30.6	2.2e-55
WP_150350715.1|1744304_1744697_-|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
WP_150350716.1|1744693_1745011_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_150350717.1|1745010_1745505_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_150351815.1|1745426_1745873_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_150350718.1|1745874_1746195_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_150350719.1|1746410_1747847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350720.1|1747830_1748178_-	HNH endonuclease	NA	A0A1X9I6D0	Streptococcus_phage	41.7	2.1e-16
WP_150350721.1|1748170_1748791_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_150350722.1|1748794_1749178_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350723.1|1749179_1750751_-|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	29.0	2.3e-33
WP_150350724.1|1750728_1751052_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_150350725.1|1751188_1752391_-|portal	phage portal protein	portal	Q6DMU2	Streptococcus_phage	32.4	1.5e-45
WP_150350726.1|1752470_1754030_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_028720292.1|1754399_1755179_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_028720291.1|1755281_1756193_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_150350727.1|1756271_1757195_-	histidine kinase	NA	NA	NA	NA	NA
WP_150350728.1|1757350_1757947_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_028720289.1|1758175_1759855_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_028720288.1|1760040_1760328_+	integration host factor subunit beta	NA	A3E2K9	Sodalis_phage	39.8	7.1e-10
WP_028720287.1|1760362_1760746_+	LapA family protein	NA	NA	NA	NA	NA
WP_150350729.1|1760745_1761393_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_080620372.1|1761484_1762717_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_150350730.1|1762713_1763601_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_150350731.1|1763658_1764249_-	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_112887206.1|1764460_1766005_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.2	5.9e-26
WP_105291427.1|1766108_1766852_-	invasion associated locus B family protein	NA	NA	NA	NA	NA
WP_150350732.1|1767342_1768890_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	44.7	3.2e-80
WP_150350733.1|1769441_1770683_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_150350734.1|1770805_1772713_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_080620367.1|1772753_1773893_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_080620366.1|1773892_1774999_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_099649395.1|1774995_1776591_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.3	1.1e-19
WP_150350735.1|1776587_1777802_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_150350736.1|1777798_1778227_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028720274.1|1778291_1779017_-	molecular chaperone DjiA	NA	NA	NA	NA	NA
WP_150350737.1|1779073_1779895_-	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
WP_150350738.1|1779891_1780734_-	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
WP_150350739.1|1780744_1781740_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_112888661.1|1781736_1782834_-	sulfate/molybdate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.5e-27
WP_099649402.1|1783087_1783570_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_150350740.1|1783744_1784836_-|integrase	tyrosine-type recombinase/integrase	integrase	H6WBN7	Rhodobacter_phage	47.0	5.0e-80
WP_150350741.1|1784832_1785069_-	helix-turn-helix domain-containing protein	NA	I3UM25	Rhodobacter_phage	66.7	4.3e-21
WP_150350742.1|1785068_1785266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351816.1|1785262_1785526_-	hypothetical protein	NA	G8DH77	Emiliania_huxleyi_virus	56.0	4.7e-16
WP_150350743.1|1785688_1786294_-	hypothetical protein	NA	H2BD37	Pseudomonas_phage	52.1	3.1e-23
WP_150350744.1|1786290_1787133_-	ParB N-terminal domain-containing protein	NA	A0A0U2C144	Paracoccus_phage	62.1	4.9e-91
WP_150350745.1|1787129_1787369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350746.1|1787365_1787944_-	DNA methyltransferase	NA	F8TVB4	EBPR_siphovirus	49.5	1.9e-49
WP_150350747.1|1787947_1788430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350748.1|1788683_1788959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351817.1|1789205_1789424_-	hypothetical protein	NA	G3M9Z9	Bacillus_virus	52.1	2.8e-06
WP_150350749.1|1789690_1789918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350750.1|1789907_1790381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350751.1|1790663_1790990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350752.1|1791162_1791498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350753.1|1792001_1792319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350754.1|1792315_1792618_+	hypothetical protein	NA	M4NJS1	Sulfitobacter_phage	52.8	1.2e-15
WP_150350755.1|1792614_1793760_+	hypothetical protein	NA	I3UM61	Rhodobacter_phage	52.5	1.1e-98
WP_150350756.1|1793752_1795594_+	hypothetical protein	NA	G8DGC0	Emiliania_huxleyi_virus	51.8	1.8e-154
WP_150350757.1|1796052_1796805_+	hypothetical protein	NA	I3ULZ3	Rhodobacter_phage	32.8	1.9e-17
WP_150350758.1|1796993_1797341_+	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	50.9	2.8e-24
WP_150350759.1|1797515_1798004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350760.1|1798003_1799731_+|terminase	terminase large subunit	terminase	I3ULZ6	Rhodobacter_phage	47.9	1.1e-140
WP_150350761.1|1799730_1801011_+|portal	phage portal protein	portal	A0A141GEV9	Brucella_phage	52.5	6.5e-103
WP_150350762.1|1800988_1801825_+|protease	Clp protease ClpP	protease	A0A141GEW1	Brucella_phage	64.3	8.3e-83
WP_150350763.1|1801835_1803071_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	55.5	1.3e-119
WP_150350764.1|1803127_1803547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350765.1|1803553_1804072_+	hypothetical protein	NA	A0A141GEW4	Brucella_phage	33.2	3.1e-19
WP_150350766.1|1804068_1804395_+|head	phage head closure protein	head	B4UTP9	Rhizobium_phage	37.7	6.2e-10
WP_150350767.1|1804391_1804778_+	DUF3168 domain-containing protein	NA	A0A141GEW7	Brucella_phage	39.0	3.8e-14
WP_146113086.1|1804774_1805137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350768.1|1805158_1805590_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_150350769.1|1805582_1805783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080622359.1|1805851_1806295_+	hypothetical protein	NA	A0A141GEW9	Brucella_phage	46.9	3.0e-31
WP_080622360.1|1806294_1806693_+	gene transfer agent family protein	NA	A0A141GEX0	Brucella_phage	42.3	5.8e-18
WP_150350770.1|1806858_1809777_+	hypothetical protein	NA	M4QSY8	Loktanella_phage	42.7	2.8e-37
WP_150350771.1|1809773_1810445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350772.1|1810441_1811011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350773.1|1811016_1811382_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350774.1|1811381_1813415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350775.1|1813424_1815497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350776.1|1815557_1815887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350777.1|1815886_1817725_+	hypothetical protein	NA	D4P7B6	Rhodococcus_phage	37.7	4.6e-33
WP_150350426.1|1817721_1818468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080622372.1|1818606_1818873_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080622373.1|1818869_1819049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350778.1|1819039_1819435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350779.1|1819439_1819634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350780.1|1819716_1820862_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_150350781.1|1820863_1821685_+	DUF3380 domain-containing protein	NA	A0A0A8IK88	Aurantimonas_phage	51.7	1.7e-64
WP_150350782.1|1821686_1822115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350783.1|1822119_1822479_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351818.1|1822540_1823752_-	UMUC-like DNA-repair protein	NA	NA	NA	NA	NA
WP_150350784.1|1823823_1824147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080622729.1|1825430_1826099_-	flagellar basal body rod modification protein	NA	NA	NA	NA	NA
WP_150350785.1|1826108_1826843_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_150350786.1|1826845_1828051_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	49.7	5.9e-98
WP_150350787.1|1828148_1828571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350788.1|1828679_1828928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349448.1|1828996_1830186_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.9	1.1e-48
WP_150350789.1|1830238_1830514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350790.1|1830678_1831917_+	flagellin	NA	NA	NA	NA	NA
WP_081791414.1|1831985_1832354_+	flagellar biosynthesis regulator FlaF	NA	NA	NA	NA	NA
WP_099649416.1|1832350_1832761_+	flagellar biosynthesis repressor FlbT	NA	NA	NA	NA	NA
WP_150350791.1|1832750_1833530_+	DUF1217 domain-containing protein	NA	NA	NA	NA	NA
WP_150349263.1|1834389_1835623_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
1837639:1837656	attR	CCGCCATCCCCGAGGTGC	NA	NA	NA	NA
>prophage 9
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	1957212	2063508	3637766	capsid,portal,integrase,head,tail,transposase,terminase,protease,tRNA	uncultured_Mediterranean_phage(14.29%)	106	1949372:1949397	2032898:2032923
1949372:1949397	attL	GCATGGGTATTTGGAAAACAGTGAAA	NA	NA	NA	NA
WP_150350851.1|1957212_1958106_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_028719028.1|1958194_1958926_+	UMP kinase	NA	NA	NA	NA	NA
WP_028719027.1|1959005_1959569_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_120441502.1|1959574_1960309_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	34.1	3.6e-13
WP_080622512.1|1960305_1961154_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_150350852.1|1961159_1962332_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_150350853.1|1962328_1963645_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_150350854.1|1963746_1966083_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_150350855.1|1966082_1966772_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_150350856.1|1966749_1967691_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_150350857.1|1967751_1970208_-	penicillin acylase family protein	NA	NA	NA	NA	NA
WP_150350858.1|1970332_1971199_+	NAD-binding protein	NA	NA	NA	NA	NA
WP_150350859.1|1971195_1971603_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_150351823.1|1974168_1975179_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_150350860.1|1975181_1977431_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_150350861.1|1977427_1978174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350862.1|1978443_1978674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350863.1|1979378_1980719_+	dNTP triphosphohydrolase	NA	NA	NA	NA	NA
WP_150350864.1|1980829_1981976_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	45.8	2.5e-61
WP_150349374.1|1983415_1984261_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	48.9	2.2e-51
WP_150351824.1|1984407_1985775_+	3'-5' exonuclease	NA	A0A0R6PHP9	Moraxella_phage	40.0	3.2e-23
WP_150350865.1|1986445_1986649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350866.1|1987224_1987626_-	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_150351825.1|1987622_1987844_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_150351826.1|1988199_1988529_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_150350867.1|1988598_1989746_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.1	2.7e-52
WP_150350868.1|1990316_1990871_+	redoxin domain-containing protein	NA	NA	NA	NA	NA
WP_028719017.1|1990867_1991551_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_150350869.1|1991630_1992056_+	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_028719015.1|1992305_1994126_+	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	44.7	5.5e-23
WP_028719014.1|1994217_1994853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350870.1|1994861_1995185_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_150351827.1|1995326_1996535_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_028719011.1|1996672_1996933_-	phosphopantetheine-binding protein	NA	NA	NA	NA	NA
WP_150350871.1|1996945_1998049_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_150351828.1|1998076_1999648_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_028719008.1|2000027_2000588_+	DUF882 domain-containing protein	NA	NA	NA	NA	NA
WP_150350872.1|2000707_2001457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036762397.1|2001416_2002040_-	uracil-DNA glycosylase	NA	NA	NA	NA	NA
WP_028719006.1|2002252_2002906_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_150350873.1|2002889_2004632_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
WP_028719004.1|2004628_2005462_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.7	1.3e-48
WP_150350874.1|2005451_2006678_-	aminoacetone oxidase family FAD-binding enzyme	NA	NA	NA	NA	NA
WP_150350875.1|2007186_2007507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350876.1|2007503_2007896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350877.1|2008001_2008523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350878.1|2008606_2008792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350879.1|2009019_2009217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350880.1|2009904_2012457_-|tail	phage tail tape measure protein	tail	A0A291AUM6	Sinorhizobium_phage	49.5	1.5e-45
WP_150350881.1|2012474_2014109_-|terminase	terminase large subunit	terminase	E4ZFM0	Streptococcus_phage	29.9	2.2e-55
WP_150350882.1|2014108_2014504_-|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
WP_150350883.1|2014556_2014757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350884.1|2014762_2015080_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_150350885.1|2015081_2015498_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_150350886.1|2015494_2015950_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_150350887.1|2015942_2016260_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_150350888.1|2016482_2016818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350264.1|2016881_2018019_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	32.2	8.5e-22
WP_150350889.1|2018175_2019216_+	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
WP_150350890.1|2019196_2019829_-	SLATT domain-containing protein	NA	NA	NA	NA	NA
WP_150350891.1|2019830_2020208_-	HNH endonuclease	NA	B5WZZ4	Pseudomonas_phage	54.4	9.4e-18
WP_150350892.1|2020200_2020728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350893.1|2020783_2022343_-|capsid	phage major capsid protein	capsid	A0A1B1IQC5	uncultured_Mediterranean_phage	27.4	3.4e-21
WP_116222240.1|2022335_2022653_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_150350894.1|2022776_2023973_-|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	33.4	3.5e-50
WP_150351829.1|2024057_2025857_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_150350895.1|2026545_2028357_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.2	3.8e-32
WP_150350896.1|2028400_2029366_-	serine hydrolase	NA	NA	NA	NA	NA
WP_120441541.1|2029487_2031257_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	39.0	4.9e-40
WP_099649711.1|2031260_2031605_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_150350897.1|2031605_2032205_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_150350898.1|2032299_2032746_-	Hsp20 family protein	NA	A0A1B1IW69	uncultured_Mediterranean_phage	39.4	3.0e-23
WP_150350899.1|2032933_2034334_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
2032898:2032923	attR	GCATGGGTATTTGGAAAACAGTGAAA	NA	NA	NA	NA
WP_150350900.1|2034303_2035368_-	FAD-binding protein	NA	NA	NA	NA	NA
WP_080622490.1|2035357_2036803_-	FAD-binding protein	NA	NA	NA	NA	NA
WP_080622489.1|2036976_2037678_+	DUF599 domain-containing protein	NA	NA	NA	NA	NA
WP_028721110.1|2037639_2038836_-	MFS transporter	NA	NA	NA	NA	NA
WP_150350901.1|2038979_2039630_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_150350902.1|2039879_2040491_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_120441554.1|2040626_2041157_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_150350903.1|2041153_2042092_+	cobalamin biosynthesis protein CobD	NA	NA	NA	NA	NA
WP_120443512.1|2042088_2043024_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_120441558.1|2043096_2044125_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_150350904.1|2044129_2045002_+	EamA family transporter	NA	NA	NA	NA	NA
WP_028721102.1|2044991_2045579_-	LysE family translocator	NA	NA	NA	NA	NA
WP_150350905.1|2045663_2046128_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_150350906.1|2046280_2047819_+	AAA family ATPase	NA	A0A1V0DYB3	Dinoroseobacter_phage	25.2	4.0e-14
WP_099649720.1|2047815_2048640_-	EcsC family protein	NA	NA	NA	NA	NA
WP_150350907.1|2048770_2049232_+	C-lysozyme inhibitor	NA	NA	NA	NA	NA
WP_036763862.1|2049218_2049761_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_028721097.1|2049968_2050565_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_112888489.1|2050561_2051119_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	39.0	2.1e-29
WP_080622479.1|2051160_2052111_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
WP_028721094.1|2052356_2052686_+	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_099649723.1|2052774_2053380_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_112888487.1|2053376_2053838_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	52.4	5.9e-38
WP_028721091.1|2053839_2054466_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_080622476.1|2054462_2054861_-	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_150350908.1|2055071_2057984_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	24.9	1.7e-66
WP_150351830.1|2058010_2059024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080622474.1|2059669_2060512_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_028721086.1|2060504_2061368_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	37.2	2.1e-36
WP_150350909.1|2061390_2061846_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_028721084.1|2061861_2062167_-	sec-independent translocation protein mttA/Hcf106	NA	NA	NA	NA	NA
WP_080622472.1|2062306_2062933_+	MarC family protein	NA	NA	NA	NA	NA
WP_120441578.1|2062932_2063508_+|protease	TIGR02281 family clan AA aspartic protease	protease	NA	NA	NA	NA
>prophage 10
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	2092279	2151740	3637766	capsid,portal,head,tail,terminase,protease,tRNA	Rhodobacter_phage(15.79%)	63	NA	NA
WP_150350927.1|2092279_2093665_-|tRNA	cysteine--tRNA ligase	tRNA	A0A0U2SJ70	Niemeyer_virus	32.7	1.9e-39
WP_150350928.1|2093818_2094160_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_120443519.1|2094229_2094676_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350929.1|2094773_2095928_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	33.7	1.7e-25
WP_028721056.1|2095924_2096734_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_028721055.1|2096730_2097600_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_150350930.1|2097697_2098123_-	YjbQ family protein	NA	NA	NA	NA	NA
WP_150350931.1|2098119_2099589_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_150350932.1|2099741_2100290_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150350933.1|2100353_2102348_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.2	4.1e-35
WP_150350934.1|2102499_2104425_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	37.6	2.0e-95
WP_150350935.1|2104546_2104909_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080622446.1|2104910_2106074_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_099649753.1|2106070_2107159_-	acyltransferase	NA	NA	NA	NA	NA
WP_028721048.1|2107230_2107854_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_150350936.1|2107960_2109298_+|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_150350937.1|2109279_2110131_+|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
WP_028721045.1|2110119_2110479_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_150350938.1|2110539_2110977_+	iron-sulfur cluster assembly scaffold protein	NA	NA	NA	NA	NA
WP_150350939.1|2111348_2113472_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_150350940.1|2113447_2115886_-	NAD-dependent DNA ligase LigA	NA	A0A1W6DX16	Sphingobium_phage	40.2	9.8e-100
WP_150350941.1|2116042_2116255_-	winged helix-turn-helix domain-containing protein	NA	A0A0K0PVG9	Roseobacter_phage	64.4	2.6e-09
WP_150350942.1|2116364_2116631_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_150350943.1|2117571_2119101_-	ATPase	NA	NA	NA	NA	NA
WP_150350944.1|2119382_2119736_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
WP_150350945.1|2120094_2120475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350946.1|2120477_2121089_-	glycoside hydrolase family protein	NA	A0A141GEY9	Brucella_phage	54.5	1.3e-29
WP_150350947.1|2121171_2121387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350948.1|2121364_2121667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080622432.1|2121653_2122103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350949.1|2122241_2122988_-	LamG domain-containing protein	NA	NA	NA	NA	NA
WP_150350950.1|2122984_2124832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350951.1|2124831_2125161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350952.1|2125967_2128109_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_150350953.1|2128108_2128867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350954.1|2128878_2131431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350955.1|2131448_2133644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350956.1|2133645_2133993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350957.1|2133991_2134315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350958.1|2134527_2135121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350959.1|2135111_2135888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350960.1|2135887_2138167_-	hypothetical protein	NA	A0A0U4JEA4	Pseudomonas_phage	51.6	1.7e-45
WP_120441674.1|2138179_2138377_-	hypothetical protein	NA	A0A0U2BXI9	Paracoccus_phage	67.6	3.9e-07
WP_150350961.1|2138466_2138802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350962.1|2138814_2139282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350963.1|2139274_2139661_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_150350964.1|2139663_2140230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350965.1|2140229_2140553_-|head,tail	head-tail adaptor protein	head,tail	A0A0U2BXJ0	Paracoccus_phage	54.3	3.3e-11
WP_150350966.1|2140554_2140923_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_150350967.1|2140919_2141549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350968.1|2141609_2142851_-|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	37.8	3.6e-58
WP_150350969.1|2142853_2143729_-|protease	Clp protease ClpP	protease	A0A0U4B0J0	Pseudomonas_phage	48.5	3.0e-59
WP_150350970.1|2143730_2144972_-|portal	phage portal protein	portal	M4QP41	Tetraselmis_viridis_virus	36.3	6.8e-65
WP_150350971.1|2144973_2146680_-|terminase	terminase large subunit	terminase	I3ULZ6	Rhodobacter_phage	60.7	3.5e-189
WP_120441695.1|2146666_2147149_-	hypothetical protein	NA	I3ULZ5	Rhodobacter_phage	50.6	1.6e-33
WP_150350972.1|2147321_2147669_-	HNH endonuclease	NA	M4QRD8	Tetraselmis_viridis_virus	44.3	2.8e-08
WP_150350973.1|2148085_2148808_-	hypothetical protein	NA	I3ULZ3	Rhodobacter_phage	38.3	6.0e-21
WP_150350974.1|2148804_2149380_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350975.1|2149613_2150264_-	DUF1376 domain-containing protein	NA	NA	NA	NA	NA
WP_150350976.1|2150253_2150538_-	hypothetical protein	NA	M4NJS1	Sulfitobacter_phage	61.2	6.0e-25
WP_150350977.1|2150534_2151029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350978.1|2151025_2151322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350979.1|2151470_2151740_-	hypothetical protein	NA	A0A1X9HW32	Ruegeria_phage	68.4	3.9e-26
>prophage 11
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	2234532	2378903	3637766	transposase,protease,tRNA,integrase	Burkholderia_virus(12.5%)	147	2278242:2278301	2347269:2348137
WP_120444783.1|2234532_2235659_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_150351030.1|2235698_2236160_-	XcyI family restriction endonuclease	NA	NA	NA	NA	NA
WP_150351031.1|2236156_2237041_-	site-specific DNA-methyltransferase	NA	S4VZJ3	Pandoravirus	56.7	3.1e-88
WP_150351032.1|2237144_2237330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349263.1|2237748_2238983_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
WP_150351839.1|2238953_2240054_+	AAA family ATPase	NA	A0A1B2ICG6	Erwinia_phage	45.3	8.3e-06
WP_150351033.1|2240094_2240511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351034.1|2240609_2241083_+|protease	ATP-dependent Lon protease	protease	NA	NA	NA	NA
WP_150351035.1|2241084_2241903_+	phosphoesterase	NA	A0A023NI32	Nitrincola_phage	28.4	9.8e-12
WP_150351036.1|2241904_2242312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351037.1|2242304_2242508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351038.1|2242504_2243422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351039.1|2243456_2244107_-	RES domain-containing protein	NA	NA	NA	NA	NA
WP_150351040.1|2244106_2244718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351041.1|2244935_2246582_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_150351042.1|2246711_2247638_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_150351043.1|2247637_2248396_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_150351044.1|2248416_2249274_-	TIM barrel protein	NA	NA	NA	NA	NA
WP_150351045.1|2249276_2250425_-	DUF993 family protein	NA	NA	NA	NA	NA
WP_150351046.1|2250436_2251204_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_150351047.1|2251200_2252343_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_150351048.1|2252501_2253518_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_150351049.1|2253556_2254816_-	DUF4147 domain-containing protein	NA	NA	NA	NA	NA
WP_150351050.1|2254812_2255613_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_150351051.1|2255609_2257181_-	acyl CoA:acetate/3-ketoacid CoA transferase	NA	NA	NA	NA	NA
WP_150351052.1|2257307_2258126_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_150351053.1|2259779_2261276_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_150351054.1|2261306_2262344_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_150351055.1|2262351_2263293_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_150351056.1|2263300_2264806_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.7	6.6e-14
WP_150351057.1|2264813_2265779_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_150351840.1|2265867_2266986_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_028717429.1|2267204_2267858_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150351058.1|2267864_2268317_-	heme-binding protein	NA	NA	NA	NA	NA
WP_150351059.1|2268320_2269589_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_028717426.1|2269598_2270102_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_150351060.1|2270159_2271128_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_150351061.1|2271164_2271956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351062.1|2271957_2272743_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_150351063.1|2273087_2273444_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351064.1|2273440_2274028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351065.1|2274158_2274455_+	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
WP_150351066.1|2274497_2274722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351067.1|2274822_2275949_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_150351068.1|2275942_2276467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351069.1|2276521_2277055_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351067.1|2277058_2278185_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
2278242:2278301	attL	ATGCAGAACTCGGCCTCCAGCGTGATCGATACCCGCCAGGCCAGGACGCGCCGGGTGAAC	NA	NA	NA	NA
WP_150351070.1|2279023_2279701_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150350867.1|2280497_2281645_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	39.1	2.7e-52
WP_150350317.1|2281804_2283358_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_150351071.1|2284095_2284452_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_150351072.1|2284513_2286931_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	50.1	5.3e-207
WP_150351073.1|2287143_2287344_-	CsbD family protein	NA	NA	NA	NA	NA
WP_150351074.1|2287482_2288430_-	glutathione synthase	NA	NA	NA	NA	NA
WP_051577648.1|2288496_2288892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351075.1|2288888_2289815_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_028717634.1|2289928_2291131_+	penicillin-binding protein activator	NA	NA	NA	NA	NA
WP_150351076.1|2291133_2293941_+	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_150351077.1|2293960_2295505_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_150351078.1|2295495_2296209_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_150351079.1|2296300_2297320_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_150351080.1|2297388_2298345_+	betaine--homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_150351081.1|2298341_2299424_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_028717641.1|2299748_2300279_-	cytochrome c family protein	NA	NA	NA	NA	NA
WP_112887265.1|2300423_2301293_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_028717643.1|2301300_2301762_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_150351082.1|2301908_2303771_+	bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA	NA	NA	NA	NA
WP_028717645.1|2305525_2306791_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.0e-137
WP_028717646.1|2306954_2307584_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	64.1	4.7e-62
WP_150351083.1|2307777_2308464_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_088239212.1|2308489_2308858_+	DUF2237 domain-containing protein	NA	NA	NA	NA	NA
WP_062344913.1|2309127_2310489_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	NA	NA	NA	NA
WP_024350869.1|2310607_2311201_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA	NA
WP_150351084.1|2311193_2312231_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_150351085.1|2313175_2313919_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_024350866.1|2313915_2314143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062344918.1|2314139_2315885_+	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
WP_024350864.1|2315932_2316748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024350863.1|2316755_2317553_+	TIGR02391 family protein	NA	NA	NA	NA	NA
WP_150351086.1|2317549_2319160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024350861.1|2319298_2320051_+	damage-inducible protein	NA	NA	NA	NA	NA
WP_150351087.1|2319965_2321531_+	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_150349530.1|2321466_2322372_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	3.2e-88
WP_099648849.1|2322404_2323343_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.2	4.0e-33
WP_150349462.1|2323536_2323866_-|transposase	transposase	transposase	B6ETC4	Enterobacteria_phage	57.1	7.2e-22
WP_027297051.1|2324286_2324505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351088.1|2324573_2324987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351089.1|2324983_2325208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351090.1|2328129_2329677_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_150351091.1|2329670_2330585_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_093067882.1|2330581_2331586_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2L1IV36	Escherichia_phage	34.5	5.4e-12
WP_150351092.1|2331634_2333479_+	methylase	NA	A0A076FMQ0	Aureococcus_anophage	30.4	1.3e-14
WP_150351093.1|2333478_2334513_+	DNA primase	NA	A0A2R4ALE6	Vibrio_phage	30.0	9.8e-09
WP_150351094.1|2334810_2335734_+	DUF2493 domain-containing protein	NA	M9PKE4	Escherichia_phage	33.0	7.0e-06
WP_062347418.1|2335758_2335977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_126006038.1|2335991_2336201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351095.1|2336826_2337270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027297060.1|2337826_2338153_+	DUF736 domain-containing protein	NA	NA	NA	NA	NA
WP_027297061.1|2338320_2338563_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_058454244.1|2338641_2338944_+	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_150351096.1|2339411_2339816_+	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_024350838.1|2339942_2340227_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_150351097.1|2340240_2341128_+	replication initiator protein A	NA	NA	NA	NA	NA
WP_150349941.1|2342690_2343974_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	38.8	5.7e-14
WP_062342490.1|2345090_2345624_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_150351098.1|2345651_2346620_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_150349848.1|2346913_2348052_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	32.2	8.5e-22
WP_062342483.1|2348363_2348870_-	DUF417 family protein	NA	NA	NA	NA	NA
2347269:2348137	attR	ATGCAGAACTCGGCCTCCAGCGTGATCGATACCCGCCAGGCCAGGACGCGCCGGGTGAACCAGTCCAGCACGGCCGCCAGATAGATGAAGCCGCGCGCCATGGGGATGTAGGTGATGTCCATCGCCCAGACCTGATTGGGCCGCGTGATCGGCAGCTTTCTCAGCAGATAGGGGTAGATCTTGTGCCCTGGTGCCGGTTTCGAGGTGTTTGGCCGTCGATAGAGGGCTTCGATGCCCATGCGCTTCATCAGCGTGGCAACATGCAGACGCCCGACCTTGAACCCTTCCTGAACCAGCAAGCCCTGCAGCATCCGGCTGCCCGCGAACGGGAATTCCATGTGCAGCTTGTCGATCCGATGCATCAGCTTCAGATCTGCGTCAGACACCGGGCGGGGCTTGTAATACACGCTGCCCCGGCTGATCCCCAGCACGATGGCCTGGCGGCTGACGCTCAGCTTGGCGGTGGGATCGATCATTTTCTTGCGCTCGGCAACAGACCCGCCTTGCCGAGCGCGCCGGACAAAAAATCGTTCTCCAGCGTCAGCTCTCCGATCTTCGCATGCAGGGTCTTCACATCGATGGTCGGCTCCGGCTCGGCCTTCGGGGCTTCACCGAACACCCCGGTCGCGCCCTCGAGCAACTGGTCTCGCCACTGCTTGATCTGGTTCGGATGAACGTCGAACTCCTGCGCCAGCTCGATCATGGTCTTCTCGCCCTTGATCGCGGCTACCGCCACTTTCGCCTTGAAAGCCGGGCTGTGGTTCCGGCGCGGTCGTCTTGCCATGGTCTTCTCCTCGCTCGCAGCATCATGCTGCTGTTACGCGGAAAATCCACTTATCCCGGCTGTTCAGATTCCCGCAGCCGCCTCT	NA	NA	NA	NA
WP_062342481.1|2348905_2349415_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_027297083.1|2349507_2349810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349462.1|2350031_2350361_+|transposase	transposase	transposase	B6ETC4	Enterobacteria_phage	57.1	7.2e-22
WP_099648849.1|2350554_2351493_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.2	4.0e-33
WP_150351099.1|2351525_2351765_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_120444783.1|2351782_2352909_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_150351100.1|2352926_2353331_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_150351101.1|2353359_2354586_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_150351102.1|2354812_2355688_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024350804.1|2355836_2356280_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_027297090.1|2356281_2356821_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_027297091.1|2356955_2357660_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_027297092.1|2357656_2358625_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA	NA
WP_150351103.1|2358719_2359292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027297094.1|2359373_2359823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027297095.1|2359929_2360226_-	branched-chain amino acid transporter	NA	NA	NA	NA	NA
WP_150351104.1|2360222_2360948_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_062342507.1|2361024_2362284_-	MFS transporter	NA	NA	NA	NA	NA
WP_062342463.1|2362292_2362784_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_150351105.1|2362787_2363261_-	redoxin domain-containing protein	NA	NA	NA	NA	NA
WP_150351106.1|2363500_2364376_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	50.8	7.7e-63
WP_150351107.1|2364679_2365285_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_062342455.1|2365277_2366024_+	oxidoreductase	NA	NA	NA	NA	NA
WP_150351108.1|2366096_2367110_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_150351109.1|2367185_2368451_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_150351841.1|2368450_2369536_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_150351110.1|2369602_2371207_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_027297104.1|2371214_2371583_+	response regulator	NA	NA	NA	NA	NA
WP_150351111.1|2371714_2371981_+	glutaredoxin 3	NA	V9QKN6	Rhizobium_phage	47.4	8.4e-13
WP_150351112.1|2372045_2372225_+	DUF427 domain-containing protein	NA	NA	NA	NA	NA
WP_150350264.1|2372275_2373413_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	32.2	8.5e-22
WP_150351113.1|2373349_2373616_+	DUF427 domain-containing protein	NA	NA	NA	NA	NA
WP_027297106.1|2373654_2374410_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_150351842.1|2374585_2375017_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_150351114.1|2375079_2375346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058454282.1|2375539_2376034_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_062342444.1|2376063_2376918_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_062342442.1|2376920_2377406_+	peptide methionine sulfoxide reductase	NA	NA	NA	NA	NA
WP_150349263.1|2377669_2378903_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
>prophage 12
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	2642549	2667337	3637766	capsid,portal,head,integrase,tail,terminase,tRNA	Only_Syngen_Nebraska_virus(25.0%)	27	2656245:2656262	2677825:2677842
WP_150351280.1|2642549_2643956_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_150351281.1|2644010_2645303_+	citrate (Si)-synthase	NA	NA	NA	NA	NA
WP_099649931.1|2645484_2646138_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_150351282.1|2646134_2647568_-	cobyric acid synthase	NA	NA	NA	NA	NA
WP_028717779.1|2647636_2648203_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_150351283.1|2648352_2649996_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.4	4.5e-149
WP_028717781.1|2650120_2650570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_028717782.1|2650636_2651545_+	polyphosphate kinase 2	NA	NA	NA	NA	NA
WP_028717783.1|2651635_2652097_+	TerB family tellurite resistance protein	NA	NA	NA	NA	NA
WP_150351855.1|2652205_2652994_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.4	1.8e-26
WP_028717785.1|2653023_2653746_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_028717786.1|2653797_2654676_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_080620637.1|2654672_2655500_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_150351284.1|2655503_2656835_+	glutamine synthetase	NA	NA	NA	NA	NA
2656245:2656262	attL	AACGGCTCGGGGATGCAC	NA	NA	NA	NA
WP_150351285.1|2657088_2658771_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_150351286.1|2658842_2660048_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	33.9	7.1e-51
WP_116222240.1|2660171_2660489_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_150351287.1|2660481_2662041_+|capsid	phage major capsid protein	capsid	A0A1B1IQC5	uncultured_Mediterranean_phage	27.1	3.8e-20
WP_150351288.1|2662045_2662624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351289.1|2662616_2662964_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_150351290.1|2663049_2664528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351291.1|2665185_2665503_+|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_150350886.1|2665495_2665951_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_150350885.1|2665947_2666364_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_150351292.1|2666365_2666683_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_150350883.1|2666688_2666889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150350882.1|2666941_2667337_+|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
2677825:2677842	attR	AACGGCTCGGGGATGCAC	NA	NA	NA	NA
>prophage 13
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	2791766	2803159	3637766	protease,head,capsid,tail	Rhodobacter_phage(25.0%)	14	NA	NA
WP_150351347.1|2791766_2792480_-	DUF2793 domain-containing protein	NA	A0A0K1Y6G9	Rhodobacter_phage	40.0	8.8e-17
WP_150351348.1|2792472_2796366_-	host specificity protein	NA	A0A0K1Y6G6	Rhodobacter_phage	38.9	1.3e-223
WP_112887430.1|2796381_2796810_-	peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	53.3	1.2e-32
WP_150351349.1|2796806_2797628_-	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	37.8	4.0e-45
WP_028717901.1|2797624_2798257_-	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	48.8	5.5e-55
WP_150351350.1|2798263_2798932_-|tail	phage tail tape measure protein	tail	C0LP53	Escherichia_virus	36.6	4.9e-09
WP_099647886.1|2798954_2799176_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_028717904.1|2799172_2799490_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_028717905.1|2799491_2799905_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_150351351.1|2799916_2800336_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_120442133.1|2800332_2800683_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_150351352.1|2800679_2801297_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351353.1|2801433_2802600_-|capsid	phage major capsid protein	capsid	B0VK33	Azospirillum_phage	36.0	6.2e-60
WP_150351354.1|2802622_2803159_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	47.5	2.3e-33
>prophage 14
NZ_CP044081	Paracoccus yeei strain FDAARGOS_643 chromosome, complete genome	3637766	2889936	2960163	3637766	transposase,protease,tRNA,integrase	Burkholderia_virus(23.08%)	59	2916243:2916261	2961609:2961627
WP_150351397.1|2889936_2891682_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_150351398.1|2891973_2894082_+	DEAD/DEAH box helicase	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	34.5	6.6e-52
WP_150351399.1|2894091_2895633_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_150351400.1|2895701_2896868_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	48.8	1.8e-96
WP_080620765.1|2897018_2897645_-	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_150351401.1|2897713_2897965_+	BolA/IbaG family iron-sulfur metabolism protein	NA	NA	NA	NA	NA
WP_080620766.1|2898043_2899009_+	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_150351402.1|2899056_2900796_+	single-stranded-DNA-specific exonuclease RecJ	NA	NA	NA	NA	NA
WP_150351864.1|2901249_2901735_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_105291445.1|2901778_2902993_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_150351403.1|2903093_2903516_+	DUF1489 family protein	NA	NA	NA	NA	NA
WP_150351404.1|2903810_2905166_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_150351405.1|2905200_2908326_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_080620772.1|2908488_2909793_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_028717997.1|2909795_2910056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150351406.1|2910045_2912724_+	sodium:solute symporter	NA	W8CYF6	Bacillus_phage	27.5	1.6e-18
WP_150351407.1|2912784_2913879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010397442.1|2914059_2914278_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_150351408.1|2914329_2914962_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_150351409.1|2914958_2916014_+	ribonuclease G	NA	NA	NA	NA	NA
WP_028718001.1|2916010_2916160_+	DNA gyrase inhibitor YacG	NA	NA	NA	NA	NA
2916243:2916261	attL	ATAGCTCAGTTGGTAGAGC	NA	NA	NA	NA
WP_150351410.1|2916370_2917456_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_150351411.1|2917559_2917850_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_150349530.1|2918039_2918945_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	3.2e-88
WP_150351412.1|2919004_2919733_-|transposase	IS3 family transposase	transposase	A4JX31	Burkholderia_virus	32.8	3.1e-17
WP_112887485.1|2920528_2921110_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_028720444.1|2921259_2921724_-	phasin	NA	NA	NA	NA	NA
WP_051578271.1|2921844_2923578_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_112887486.1|2924271_2925618_+	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA	NA
WP_150351413.1|2925642_2926383_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_150351414.1|2926548_2928495_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.4	4.7e-121
WP_011747293.1|2928729_2928936_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	45.9	3.0e-10
WP_150351415.1|2929093_2930545_+	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	23.3	6.0e-12
WP_150351416.1|2930546_2931197_+	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_150351417.1|2931240_2932443_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_112887490.1|2932553_2934413_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_150351418.1|2934690_2936490_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_120442251.1|2936807_2937605_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_150351865.1|2937706_2938120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080620813.1|2938305_2938758_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_028719843.1|2938772_2939792_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.8	1.3e-45
WP_150351419.1|2939877_2940477_+	2-hydroxychromene-2-carboxylate isomerase	NA	NA	NA	NA	NA
WP_150351420.1|2940473_2941244_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_028719840.1|2941278_2941626_-	ATP synthase	NA	NA	NA	NA	NA
WP_028719839.1|2941722_2942169_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_028719838.1|2942178_2943603_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_150351421.1|2943622_2944498_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_150351422.1|2944512_2946048_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_028719835.1|2946047_2946614_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_150351423.1|2946912_2947710_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_150351424.1|2947761_2948508_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_028719833.1|2948772_2951094_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	44.0	2.3e-170
WP_150351425.1|2951194_2954650_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_150351426.1|2954695_2955244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150351427.1|2955417_2956416_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_088239192.1|2956499_2957054_+	twin-arginine translocation pathway signal	NA	NA	NA	NA	NA
WP_099647954.1|2957085_2957724_-	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	48.9	6.0e-25
WP_099647955.1|2957946_2958435_+	single-stranded DNA-binding protein	NA	A0A0U2C0X4	Paracoccus_phage	80.2	1.0e-48
WP_150349263.1|2958929_2960163_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
2961609:2961627	attR	GCTCTACCAACTGAGCTAT	NA	NA	NA	NA
>prophage 1
NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	145925	24440	59157	145925	transposase	uncultured_virus(30.0%)	37	NA	NA
WP_150349226.1|24440_25667_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	29.9	3.9e-28
WP_120444778.1|27253_28011_-|transposase	IS5 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	38.0	1.9e-09
WP_120445002.1|28073_28436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349227.1|28489_29098_+|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	39.1	2.0e-22
WP_120444782.1|29081_29972_+	helix-turn-helix transcriptional regulator	NA	E3SLU8	Prochlorococcus_phage	46.1	3.5e-39
WP_120444783.1|31208_32334_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.0	4.8e-33
WP_120445004.1|32545_33019_-	DUF3768 domain-containing protein	NA	NA	NA	NA	NA
WP_120444787.1|33671_34091_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_120444788.1|34226_35774_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	43.7	1.3e-12
WP_120444790.1|35873_36299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147405592.1|36619_37036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349228.1|37319_38738_+	TolC family protein	NA	NA	NA	NA	NA
WP_120444795.1|38734_40102_+	copper oxidase	NA	NA	NA	NA	NA
WP_120444797.1|41260_41758_+	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	56.3	2.6e-15
WP_120444799.1|41902_44233_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.4	2.0e-78
WP_120444801.1|44264_44744_+	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_120444802.1|44881_45262_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_147405603.1|45443_46064_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA	NA
WP_120444804.1|46187_46526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_120444806.1|46598_48101_+	multicopper oxidase family protein	NA	NA	NA	NA	NA
WP_120444808.1|48110_48527_+	cytochrome c	NA	NA	NA	NA	NA
WP_120444809.1|48540_49155_+	DsbA family protein	NA	NA	NA	NA	NA
WP_120445006.1|49218_49704_+	DUF305 domain-containing protein	NA	A0A1V0SJW0	Klosneuvirus	29.4	5.3e-05
WP_120444811.1|49756_50407_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_120444812.1|50455_50728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120444814.1|50848_51292_-	cytochrome c	NA	NA	NA	NA	NA
WP_120444816.1|51295_51577_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_139085430.1|51678_51969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_120444817.1|52080_52497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120444819.1|52606_52888_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_147405593.1|53815_54142_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120444822.1|54268_54460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349229.1|54458_54938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349230.1|55049_55544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_120444827.1|55549_55888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120444782.1|57658_58549_-	helix-turn-helix transcriptional regulator	NA	E3SLU8	Prochlorococcus_phage	46.1	3.5e-39
WP_150349231.1|58896_59157_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	145925	73827	120929	145925	transposase,protease,integrase	Leptospira_phage(15.38%)	44	82750:82765	97787:97802
WP_150349242.1|73827_75017_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.9	1.1e-48
WP_150349243.1|75222_76392_-	sodium:proton exchanger	NA	NA	NA	NA	NA
WP_150349244.1|76449_76665_-	thioredoxin fold domain-containing protein	NA	NA	NA	NA	NA
WP_150349245.1|77033_77609_-	ETC complex I subunit	NA	NA	NA	NA	NA
WP_095641483.1|77610_78231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349246.1|78230_78434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349247.1|78442_79090_-	HdeD family acid-resistance protein	NA	NA	NA	NA	NA
WP_134078635.1|79086_80259_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_150349248.1|80336_83231_-	AAA domain-containing protein	NA	K4FB40	Cronobacter_phage	39.9	6.8e-124
82750:82765	attL	TCCAGGATCGTCTTGA	NA	NA	NA	NA
WP_150349249.1|83295_85128_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	43.3	2.9e-104
WP_028720457.1|85145_85574_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_072493527.1|85776_86202_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_028713488.1|86216_86615_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_150349250.1|86635_87127_+	Hsp20 family protein	NA	NA	NA	NA	NA
WP_150349251.1|87199_88153_+	YfdX family protein	NA	NA	NA	NA	NA
WP_028720084.1|89124_90057_-|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	39.4	9.7e-56
WP_150349252.1|90225_91116_-	helix-turn-helix domain-containing protein	NA	E3SK99	Synechococcus_phage	49.0	9.9e-42
WP_150349253.1|91728_91974_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_150349254.1|91970_92369_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_150349255.1|92459_93074_-	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_150349256.1|93075_93993_-	DUF1403 family protein	NA	NA	NA	NA	NA
WP_150349257.1|94288_94510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349258.1|94513_95125_+	cell filamentation protein Fic	NA	NA	NA	NA	NA
WP_150349259.1|95117_96146_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_150349260.1|96425_97607_+	plasmid partitioning protein RepA	NA	A0A240F4U1	Ochrobactrum_phage	39.7	4.2e-72
WP_150349261.1|97554_98556_+	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	32.5	1.5e-25
97787:97802	attR	TCCAGGATCGTCTTGA	NA	NA	NA	NA
WP_150349262.1|98745_99954_+	replication protein C	NA	NA	NA	NA	NA
WP_150349263.1|100188_101423_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
WP_150349264.1|102493_102781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349265.1|102824_103247_-	recombinase family protein	NA	R9TP69	Rhizobium_phage	30.1	2.2e-07
WP_150349266.1|103568_104864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349267.1|104966_105398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349268.1|105490_107557_-	AAA family ATPase	NA	G8DDJ2	Micromonas_pusilla_virus	32.5	2.6e-24
WP_150349269.1|108824_109388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120444783.1|111284_112411_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.0	4.8e-33
WP_150349270.1|112545_113550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349271.1|113899_114880_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_028718924.1|114876_115428_-	biotin transporter BioY	NA	NA	NA	NA	NA
WP_036762303.1|115526_116165_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_099650588.1|117027_117405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349272.1|117472_117661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099650590.1|117774_117984_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	48.5	1.5e-09
WP_099650591.1|119227_119641_-	DUF883 family protein	NA	NA	NA	NA	NA
WP_150349263.1|119695_120929_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
>prophage 1
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	0	11731	267632		Streptococcus_phage(25.0%)	10	NA	NA
WP_150349502.1|1088_2192_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_150349503.1|2308_3391_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	44.6	9.5e-71
WP_028719304.1|3471_4143_+	oxidoreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	34.7	5.9e-23
WP_150349504.1|4139_5237_-	thiolase family protein	NA	NA	NA	NA	NA
WP_150349505.1|5233_6379_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_150349506.1|6375_6927_-	BioY family transporter	NA	NA	NA	NA	NA
WP_150349507.1|6989_8003_-	substrate-binding domain-containing protein	NA	C6ZCU4	Enterobacteria_phage	30.4	1.3e-21
WP_150349508.1|8109_9162_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_150349509.1|9158_10253_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_150349510.1|10249_11731_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.2	9.1e-16
>prophage 2
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	16065	17133	267632		Tupanvirus(100.0%)	1	NA	NA
WP_150349513.1|16065_17133_+	EF-P lysine aminoacylase GenX	NA	A0A2K9KZX5	Tupanvirus	28.1	2.5e-23
>prophage 3
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	22966	29929	267632		Enterobacteria_phage(50.0%)	7	NA	NA
WP_150349517.1|22966_23743_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	23.9	1.4e-12
WP_150349518.1|23758_25459_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.3	3.3e-62
WP_099650176.1|25437_26427_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_120445052.1|26578_27160_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	46.4	6.3e-37
WP_099650178.1|27156_28194_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	9.6e-97
WP_150349519.1|28190_29042_+	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	37.5	9.8e-31
WP_150349520.1|29038_29929_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	56.4	3.6e-92
>prophage 4
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	39630	43324	267632		Anomala_cuprea_entomopoxvirus(50.0%)	3	NA	NA
WP_150349526.1|39630_40311_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.7	1.8e-06
WP_080620196.1|40307_41483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349527.1|41479_43324_-	hypothetical protein	NA	A0A1V0SKD7	Klosneuvirus	22.6	2.8e-06
>prophage 5
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	47182	68897	267632	protease,transposase	Burkholderia_virus(18.18%)	21	NA	NA
WP_150349530.1|47182_48088_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	3.2e-88
WP_099648849.1|48120_49059_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.2	4.0e-33
WP_150349462.1|49252_49582_-|transposase	transposase	transposase	B6ETC4	Enterobacteria_phage	57.1	7.2e-22
WP_150349531.1|49650_49980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349532.1|50066_50474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349533.1|51296_51770_-|protease	ATP-dependent Lon protease	protease	NA	NA	NA	NA
WP_150349534.1|51865_52975_-	AAA family ATPase	NA	A0A1V0SCN1	Indivirus	26.2	6.8e-08
WP_150349535.1|53050_53839_-	metallophosphoesterase	NA	K4K650	Caulobacter_phage	29.9	5.2e-26
WP_150349536.1|54071_54422_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	44.0	5.6e-17
WP_150349679.1|54418_54757_-|protease	ATP-dependent Lon protease	protease	NA	NA	NA	NA
WP_150349681.1|55146_55329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150349465.1|55823_56108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349374.1|57414_58260_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	48.9	2.2e-51
WP_150349263.1|58843_60078_-|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
WP_150349537.1|60460_61990_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.5	1.8e-22
WP_150349538.1|62242_62839_-	Isoquinoline 1-oxidoreductase subunit	NA	NA	NA	NA	NA
WP_150349539.1|62835_64977_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_028719676.1|64979_65438_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	28.3	2.4e-07
WP_150349540.1|65581_66226_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_036762739.1|66277_67666_-	ammonium transporter	NA	NA	NA	NA	NA
WP_028719674.1|68009_68897_+	glutamine amidotransferase family protein	NA	F2Y1G4	Organic_Lake_phycodnavirus	23.5	5.7e-05
>prophage 6
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	90315	92205	267632		Enterococcus_phage(50.0%)	2	NA	NA
WP_150349551.1|90315_91203_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.1	6.6e-30
WP_028719656.1|91320_92205_+	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	32.2	4.0e-11
>prophage 7
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	103133	104240	267632	holin	Mycoplasma_phage(100.0%)	1	NA	NA
WP_150349562.1|103133_104240_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	Q6GZ03	Mycoplasma_phage	47.2	4.4e-15
>prophage 8
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	112190	114230	267632		Campylobacter_virus(100.0%)	1	NA	NA
WP_150349571.1|112190_114230_-	SPASM domain-containing protein	NA	D5GV15	Campylobacter_virus	29.5	2.8e-07
>prophage 9
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	126157	130512	267632		Indivirus(50.0%)	3	NA	NA
WP_150349577.1|126157_128410_-	glycosyl transferase family 1	NA	A0A1V0SDW6	Indivirus	25.3	1.2e-19
WP_150349578.1|128426_129443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120444259.1|129891_130512_-	TerC family protein	NA	W8EBD0	Pseudomonas_phage	32.8	2.9e-16
>prophage 10
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	145456	146182	267632		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_150349589.1|145456_146182_-	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.4	2.2e-15
>prophage 11
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	152448	153495	267632		Tupanvirus(100.0%)	1	NA	NA
WP_150349594.1|152448_153495_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	NA	A0A2K9L698	Tupanvirus	47.7	1.4e-15
>prophage 12
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	171971	174289	267632		Escherichia_phage(50.0%)	2	NA	NA
WP_028718888.1|171971_172745_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.8	5.4e-20
WP_150349606.1|172741_174289_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	30.9	4.4e-13
>prophage 13
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	178588	179377	267632		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_150349610.1|178588_179377_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	29.6	9.8e-09
>prophage 14
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	184232	185701	267632		Staphylococcus_phage(50.0%)	2	NA	NA
WP_150349615.1|184232_185000_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.2	6.4e-13
WP_150349616.1|184996_185701_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	2.3e-09
>prophage 15
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	191369	200899	267632	transposase	Burkholderia_virus(28.57%)	10	NA	NA
WP_150349263.1|191369_192603_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	60.9	4.4e-88
WP_150349690.1|192644_193508_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	26.4	7.9e-20
WP_150349621.1|193763_193916_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_150349622.1|194048_195254_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.1	2.4e-14
WP_150349623.1|195616_196090_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_150349624.1|196086_196704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150349625.1|196896_197538_-	aldolase	NA	A0A077SK32	Escherichia_phage	50.2	1.9e-47
WP_150349626.1|197534_198788_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	47.9	3.5e-85
WP_150349627.1|199020_199734_+	DUF72 domain-containing protein	NA	A0A2R3ZR64	Marseillevirus	27.2	1.8e-14
WP_120444783.1|199773_200899_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.0	4.8e-33
>prophage 16
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	208102	209749	267632		Simian_cytomegalovirus(100.0%)	1	NA	NA
WP_150349632.1|208102_209749_+	heme peroxidase	NA	G8XT72	Simian_cytomegalovirus	29.8	2.1e-53
>prophage 17
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	223676	225143	267632		Bacillus_phage(100.0%)	1	NA	NA
WP_150349641.1|223676_225143_-	UdgX family uracil-DNA binding protein	NA	A0A127AW33	Bacillus_phage	30.1	1.4e-13
>prophage 18
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	237905	239444	267632		Staphylococcus_phage(100.0%)	1	NA	NA
WP_150349651.1|237905_239444_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.0	5.0e-17
>prophage 19
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	249751	250558	267632		Planktothrix_phage(100.0%)	1	NA	NA
WP_150349660.1|249751_250558_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	30.7	6.1e-14
>prophage 20
NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	267632	254618	256124	267632		Staphylococcus_phage(100.0%)	1	NA	NA
WP_150349666.1|254618_256124_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.2	1.4e-19
