assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008693365.1_ASM869336v1	NZ_CP044064	Yersinia pseudotuberculosis strain FDAARGOS_665 chromosome, complete genome	1	816629-816712	1	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	GTTCACTGCCGCGCAGGCAGCTTA	24	0	0	NA	NA	I-F	1	1	Orphan	DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|80aa|up_6|NZ_CP044064.1_803407_803647_+,NA|84aa|up_5|NZ_CP044064.1_803685_803937_+,NA	NA|374aa|up_9|NZ_CP044064.1_798615_799737_+	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|194aa|up_8|NZ_CP044064.1_799751_800333_-	pfam17194, AbiEi_3_N, Transcriptional regulator, AbiEi antitoxin N-terminal domain	NA|639aa|up_7|NZ_CP044064.1_800681_802598_-	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|80aa|up_6|NZ_CP044064.1_803407_803647_+	NA	NA|84aa|up_5|NZ_CP044064.1_803685_803937_+	NA	NA|160aa|up_4|NZ_CP044064.1_803960_804440_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|134aa|up_3|NZ_CP044064.1_804544_804946_-	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|101aa|up_2|NZ_CP044064.1_806456_806759_+	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|771aa|up_1|NZ_CP044064.1_806914_809227_-	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C	NA|2005aa|up_0|NZ_CP044064.1_809334_815349_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|285aa|down_0|NZ_CP044064.1_816719_817574_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|509aa|down_1|NZ_CP044064.1_817915_819442_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|649aa|down_2|NZ_CP044064.1_819455_821402_+	COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism]	NA|329aa|down_3|NZ_CP044064.1_821695_822682_+	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|310aa|down_4|NZ_CP044064.1_822789_823719_+	cd19968, PBP1_ABC_IbpA-like, periplasmic sugar-binding protein IbpA of an ABC transporter and similar proteins	NA|516aa|down_5|NZ_CP044064.1_823767_825315_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|343aa|down_6|NZ_CP044064.1_825326_826355_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|378aa|down_7|NZ_CP044064.1_826378_827512_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|657aa|down_8|NZ_CP044064.1_827543_829514_+	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090)	NA|307aa|down_9|NZ_CP044064.1_829666_830587_+	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase
GCF_008693365.1_ASM869336v1	NZ_CP044064	Yersinia pseudotuberculosis strain FDAARGOS_665 chromosome, complete genome	2	1156275-1156353	2	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	GCACTTACCCGAATCACTGACGTGA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|286aa|up_9|NZ_CP044064.1_1141605_1142463_-	PRK01060, PRK01060, endonuclease IV; Provisional	NA|363aa|up_8|NZ_CP044064.1_1142626_1143715_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|291aa|up_7|NZ_CP044064.1_1144372_1145245_+	PRK10837, PRK10837, putative DNA-binding transcriptional regulator; Provisional	NA|504aa|up_6|NZ_CP044064.1_1145502_1147014_+	PRK10836, PRK10836, lysine transporter; Provisional	NA|382aa|up_5|NZ_CP044064.1_1147299_1148445_+	cd01139, TroA_f, Periplasmic binding protein TroA_f	NA|361aa|up_4|NZ_CP044064.1_1148739_1149822_+	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism]	NA|263aa|up_3|NZ_CP044064.1_1149818_1150607_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|666aa|up_2|NZ_CP044064.1_1150866_1152864_+	PRK13513, PRK13513, ligand-gated channel protein	NA|217aa|up_1|NZ_CP044064.1_1154047_1154698_-	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C	NA|356aa|up_0|NZ_CP044064.1_1155183_1156251_+	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|275aa|down_0|NZ_CP044064.1_1156409_1157234_+	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold	NA|329aa|down_1|NZ_CP044064.1_1157230_1158217_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|224aa|down_2|NZ_CP044064.1_1158213_1158885_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|410aa|down_3|NZ_CP044064.1_1159195_1160425_+	PRK10001, PRK10001, serine-type D-Ala-D-Ala carboxypeptidase	NA|434aa|down_4|NZ_CP044064.1_1160830_1162132_-	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|255aa|down_5|NZ_CP044064.1_1163231_1163996_-	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional	NA|224aa|down_6|NZ_CP044064.1_1164225_1164897_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|199aa|down_7|NZ_CP044064.1_1165154_1165751_-	PRK11837, PRK11837, undecaprenyl pyrophosphate phosphatase; Provisional	NA|272aa|down_8|NZ_CP044064.1_1165759_1166575_-	COG3907, COG3907, PAP2 (acid phosphatase) superfamily protein [General function prediction only]	NA|563aa|down_9|NZ_CP044064.1_1166907_1168596_-	PRK04972, PRK04972, putative transporter; Provisional
GCF_008693365.1_ASM869336v1	NZ_CP044064	Yersinia pseudotuberculosis strain FDAARGOS_665 chromosome, complete genome	3	2348593-2348800	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,29	0	0	NA	NA	I-F:I-F:I-F	3,3,2	3	TypeI-F	DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|70aa|up_9|NZ_CP044064.1_2336308_2336518_-,NA|425aa|down_1|NZ_CP044064.1_2350940_2352215_-,NA|372aa|down_2|NZ_CP044064.1_2352253_2353369_-	NA|70aa|up_9|NZ_CP044064.1_2336308_2336518_-	NA	NA|453aa|up_8|NZ_CP044064.1_2336641_2338000_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|168aa|up_7|NZ_CP044064.1_2338046_2338550_+	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy    production and conversion]	NA|340aa|up_6|NZ_CP044064.1_2338560_2339580_+	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	cas6f|185aa|up_5|NZ_CP044064.1_2339657_2340212_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|335aa|up_4|NZ_CP044064.1_2340222_2341227_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|317aa|up_3|NZ_CP044064.1_2341244_2342195_-	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|449aa|up_2|NZ_CP044064.1_2342191_2343538_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1097aa|up_1|NZ_CP044064.1_2343965_2347256_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|329aa|up_0|NZ_CP044064.1_2347252_2348239_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|416aa|down_0|NZ_CP044064.1_2349134_2350382_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|425aa|down_1|NZ_CP044064.1_2350940_2352215_-	NA	NA|372aa|down_2|NZ_CP044064.1_2352253_2353369_-	NA	NA|313aa|down_3|NZ_CP044064.1_2353491_2354430_-	pfam08950, DUF1861, Protein of unknown function (DUF1861)	NA|352aa|down_4|NZ_CP044064.1_2354455_2355511_-	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase	NA|275aa|down_5|NZ_CP044064.1_2355657_2356482_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|429aa|down_6|NZ_CP044064.1_2357466_2358753_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|347aa|down_7|NZ_CP044064.1_2359024_2360065_+	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria	NA|463aa|down_8|NZ_CP044064.1_2360081_2361470_+	PRK15414, PRK15414, phosphomannomutase	NA|360aa|down_9|NZ_CP044064.1_2361569_2362649_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
GCF_008693365.1_ASM869336v1	NZ_CP044064	Yersinia pseudotuberculosis strain FDAARGOS_665 chromosome, complete genome	4	3967633-3967760	4	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	TTAGGCTTTTAATCCATTTTTGATTTTGAATGGGTTGTTGA	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|70aa|up_5|NZ_CP044064.1_3959957_3960167_-,NA|64aa|down_0|NZ_CP044064.1_3967898_3968090_+,NA|78aa|down_3|NZ_CP044064.1_3970078_3970312_+	NA|547aa|up_9|NZ_CP044064.1_3957192_3958833_-	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|86aa|up_8|NZ_CP044064.1_3958835_3959093_-	PRK00041, PRK00041, hypothetical protein; Validated	NA|120aa|up_7|NZ_CP044064.1_3959056_3959416_-	PRK01732, rnpA, ribonuclease P; Reviewed	NA|47aa|up_6|NZ_CP044064.1_3959434_3959575_-	PRK00399, rpmH, 50S ribosomal protein L34; Reviewed	NA|70aa|up_5|NZ_CP044064.1_3959957_3960167_-	NA	NA|463aa|up_4|NZ_CP044064.1_3960290_3961679_+	TIGR00362, DnaA, chromosomal replication initiator protein DnaA	NA|367aa|up_3|NZ_CP044064.1_3961683_3962784_+	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated	NA|362aa|up_2|NZ_CP044064.1_3962956_3964042_+	TIGR00611, DNA_replication_and_repair_protein_RecF, recF protein	NA|805aa|up_1|NZ_CP044064.1_3964061_3966476_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|270aa|up_0|NZ_CP044064.1_3966690_3967500_+	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional	NA|64aa|down_0|NZ_CP044064.1_3967898_3968090_+	NA	NA|318aa|down_1|NZ_CP044064.1_3968191_3969145_-	PRK06823, PRK06823, ornithine cyclodeaminase family protein	NA|321aa|down_2|NZ_CP044064.1_3969138_3970101_-	PRK06815, PRK06815, threonine/serine dehydratase	NA|78aa|down_3|NZ_CP044064.1_3970078_3970312_+	NA	NA|434aa|down_4|NZ_CP044064.1_3970308_3971610_+	pfam12566, DUF3748, Protein of unknown function (DUF3748)	NA|113aa|down_5|NZ_CP044064.1_3971649_3971988_-	PRK11616, PRK11616, hypothetical protein; Provisional	NA|138aa|down_6|NZ_CP044064.1_3972355_3972769_+	PRK10743, PRK10743, heat shock chaperone IbpA	NA|155aa|down_7|NZ_CP044064.1_3973049_3973514_+	PRK11597, PRK11597, heat shock chaperone IbpB; Provisional	NA|553aa|down_8|NZ_CP044064.1_3973886_3975545_+	PRK03818, PRK03818, putative transporter; Validated	NA|422aa|down_9|NZ_CP044064.1_3975657_3976923_-	PRK09440, avtA, valine--pyruvate transaminase; Provisional
