assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008632435.1_ASM863243v1	NZ_CP043928	Klebsiella quasipneumoniae subsp. quasipneumoniae strain M17277 chromosome, complete genome	1	568803-569211	1	PILER-CR	no		cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Orphan	TTTTGCTATCTGAATCCGTGACGCGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAAG	63	2	2	568986-569038|569102-569153	NZ_CP043928.1_568750-568802|NZ_CP043928.1_568750-568801	NA	3	3	Orphan	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,PD-DExK	NA,NA	NA|216aa|up_9|NZ_CP043928.1_557652_558300_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|347aa|up_8|NZ_CP043928.1_558375_559416_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|192aa|up_7|NZ_CP043928.1_559536_560112_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|up_6|NZ_CP043928.1_560121_560712_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|129aa|up_5|NZ_CP043928.1_560737_561124_-	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein	NA|703aa|up_4|NZ_CP043928.1_561081_563190_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|288aa|up_3|NZ_CP043928.1_563253_564117_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|524aa|up_2|NZ_CP043928.1_564316_565888_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|257aa|up_1|NZ_CP043928.1_566451_567222_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_0|NZ_CP043928.1_567250_568141_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|288aa|down_0|NZ_CP043928.1_569590_570454_+	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|136aa|down_1|NZ_CP043928.1_570603_571011_+	COG3678, CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism]	NA|234aa|down_2|NZ_CP043928.1_571276_571978_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_3|NZ_CP043928.1_572082_572979_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|123aa|down_4|NZ_CP043928.1_573018_573387_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP043928.1_573513_574500_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|131aa|down_6|NZ_CP043928.1_574595_574988_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|99aa|down_7|NZ_CP043928.1_575348_575645_-	pfam13997, YqjK, YqjK-like protein	NA|133aa|down_8|NZ_CP043928.1_575641_576040_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP043928.1_576042_576348_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_008632435.1_ASM863243v1	NZ_CP043928	Klebsiella quasipneumoniae subsp. quasipneumoniae strain M17277 chromosome, complete genome	2	2183886-2184280	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Type I-E	GTCTTCCCCACGTGCGTGGGGGTGTTTC,GTCTTCCCCACGTGCGTGGGGGTGTTTC,GTCTTCCCCACGTGCGTGGGGGTGTTTCC	28,28,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	5,6,6	6	TypeI-E	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,PD-DExK	NA|109aa|up_9|NZ_CP043928.1_2170754_2171081_-,NA	NA|109aa|up_9|NZ_CP043928.1_2170754_2171081_-	NA	NA|129aa|up_8|NZ_CP043928.1_2172182_2172569_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|145aa|up_7|NZ_CP043928.1_2172609_2173044_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|400aa|up_6|NZ_CP043928.1_2173159_2174359_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|386aa|up_5|NZ_CP043928.1_2174655_2175813_+	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|717aa|up_4|NZ_CP043928.1_2175858_2178009_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|360aa|up_3|NZ_CP043928.1_2178255_2179335_-	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|363aa|up_2|NZ_CP043928.1_2179638_2180727_+	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|590aa|up_1|NZ_CP043928.1_2180801_2182571_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_0|NZ_CP043928.1_2182563_2183634_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|308aa|down_0|NZ_CP043928.1_2185231_2186155_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	cas3|649aa|down_1|NZ_CP043928.1_2186381_2188328_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|down_2|NZ_CP043928.1_2188331_2189855_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|down_3|NZ_CP043928.1_2189866_2190433_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|down_4|NZ_CP043928.1_2190425_2191073_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|down_5|NZ_CP043928.1_2191102_2192137_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|down_6|NZ_CP043928.1_2192170_2192866_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|down_7|NZ_CP043928.1_2192865_2193741_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|down_8|NZ_CP043928.1_2193718_2194006_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|124aa|down_9|NZ_CP043928.1_2194578_2194950_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family
GCF_008632435.1_ASM863243v1	NZ_CP043928	Klebsiella quasipneumoniae subsp. quasipneumoniae strain M17277 chromosome, complete genome	3	2194054-2194569	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Type I-E	GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC,GTCTTCCCCACGCACGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	7,8,8	8	TypeI-E	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,PD-DExK	NA,NA	NA|357aa|up_9|NZ_CP043928.1_2182563_2183634_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|308aa|up_8|NZ_CP043928.1_2185231_2186155_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	cas3|649aa|up_7|NZ_CP043928.1_2186381_2188328_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|up_6|NZ_CP043928.1_2188331_2189855_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|189aa|up_5|NZ_CP043928.1_2189866_2190433_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|up_4|NZ_CP043928.1_2190425_2191073_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|345aa|up_3|NZ_CP043928.1_2191102_2192137_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|232aa|up_2|NZ_CP043928.1_2192170_2192866_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|NZ_CP043928.1_2192865_2193741_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|96aa|up_0|NZ_CP043928.1_2193718_2194006_+	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	NA|124aa|down_0|NZ_CP043928.1_2194578_2194950_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|251aa|down_1|NZ_CP043928.1_2195453_2196206_+	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|595aa|down_2|NZ_CP043928.1_2196208_2197993_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|446aa|down_3|NZ_CP043928.1_2198006_2199344_+	pfam00034, Cytochrom_C, Cytochrome c	NA|208aa|down_4|NZ_CP043928.1_2199427_2200051_+	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|220aa|down_5|NZ_CP043928.1_2200047_2200707_+	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|246aa|down_6|NZ_CP043928.1_2200756_2201494_+	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|77aa|down_7|NZ_CP043928.1_2201490_2201721_+	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]	NA|153aa|down_8|NZ_CP043928.1_2201704_2202163_+	PRK13165, PRK13165, cytochrome c maturation protein CcmE	NA|651aa|down_9|NZ_CP043928.1_2202159_2204112_+	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]
GCF_008632435.1_ASM863243v1	NZ_CP043928	Klebsiella quasipneumoniae subsp. quasipneumoniae strain M17277 chromosome, complete genome	4	2274996-2275152	4	PILER-CR	no	DEDDh	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL	Unclear	CCTGGGCTTTCTGCGCTACTGCCGGTTTCGCTGCGGCTTTATGGTGCTTC	50	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,DinG,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,PD-DExK	NA|172aa|up_8|NZ_CP043928.1_2261124_2261640_-,NA|310aa|up_3|NZ_CP043928.1_2270010_2270940_+,NA|81aa|up_2|NZ_CP043928.1_2271976_2272219_+,NA	NA|279aa|up_9|NZ_CP043928.1_2260280_2261117_-	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain	NA|172aa|up_8|NZ_CP043928.1_2261124_2261640_-	NA	NA|295aa|up_7|NZ_CP043928.1_2261796_2262681_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|309aa|up_6|NZ_CP043928.1_2262677_2263604_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|251aa|up_5|NZ_CP043928.1_2263702_2264455_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|786aa|up_4|NZ_CP043928.1_2265280_2267638_+	TIGR01646, conserved_hypothetical_protein, Rhs element Vgr protein	NA|310aa|up_3|NZ_CP043928.1_2270010_2270940_+	NA	NA|81aa|up_2|NZ_CP043928.1_2271976_2272219_+	NA	NA|119aa|up_1|NZ_CP043928.1_2272653_2273010_+	pfam07007, LprI, Lysozyme inhibitor LprI	NA|193aa|up_0|NZ_CP043928.1_2274262_2274841_+	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein	NA|458aa|down_0|NZ_CP043928.1_2275565_2276939_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|212aa|down_1|NZ_CP043928.1_2277168_2277804_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_2|NZ_CP043928.1_2277840_2278989_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|394aa|down_3|NZ_CP043928.1_2279283_2280465_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|304aa|down_4|NZ_CP043928.1_2280577_2281489_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP043928.1_2281507_2282533_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP043928.1_2282828_2282918_+	PRK14756, small_mem_YnhF, YnhF family membrane protein; Validated	NA|390aa|down_7|NZ_CP043928.1_2283085_2284255_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP043928.1_2284314_2284896_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|162aa|down_9|NZ_CP043928.1_2285376_2285862_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
