The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	0	61477	2876735	tail,portal,head,terminase,holin,protease,capsid	Staphylococcus_phage(80.0%)	64	NA	NA
WP_000625087.1|0_1662_+|terminase	terminase large subunit	terminase	Q8LTH3	Staphylococcus_phage	100.0	0.0e+00
WP_000025268.1|1677_2841_+|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
WP_000861911.1|2824_3562_+|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
WP_150073873.1|3584_4730_+|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	99.2	1.1e-213
WP_000238236.1|4749_5034_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5023_5308_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5291_5654_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114341.1|5650_6055_+	HK97 gp10 family phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
WP_000565498.1|6051_6459_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000985141.1|6459_7101_+|tail	phage tail protein	tail	A0A1W6JPP5	Staphylococcus_phage	100.0	1.1e-119
WP_094969686.1|7061_7367_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	93.2	1.5e-29
WP_001096355.1|7417_7768_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_000504572.1|8012_12524_+|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	88.0	0.0e+00
WP_096391898.1|14018_17804_+	hypothetical protein	NA	A0A1P8L6B8	Staphylococcus_phage	99.7	0.0e+00
WP_001153681.1|17793_17946_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|17992_18280_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|18337_18634_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|18783_18960_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|19012_19120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|19171_19426_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|19437_20193_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000919350.1|20383_20875_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000727649.1|21954_22404_-	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000702263.1|23092_23443_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|23495_23756_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|24068_24248_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001557458.1|25208_26639_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000671712.1|26653_26944_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068542.1|27222_28509_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|28708_28807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681968.1|29049_29226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691584.1|29483_29864_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991306.1|29860_30757_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000645727.1|30757_31438_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763043.1|31434_32307_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_001221651.1|32306_33047_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|33112_33676_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966288.1|33796_34321_+	membrane protein	NA	NA	NA	NA	NA
WP_001033971.1|34380_34938_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713072.1|34934_35777_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188043.1|35833_36874_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000267034.1|37324_37498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205106.1|38070_38472_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000181315.1|38741_39770_+	lactonase family protein	NA	NA	NA	NA	NA
WP_001021210.1|39889_41269_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001792184.1|41320_41494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001140871.1|41686_42616_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_000149686.1|42668_43229_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275729.1|43597_44695_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.9	6.7e-48
WP_000323161.1|44899_46462_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_001802312.1|46472_46580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001177828.1|46651_47446_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_000897635.1|47465_48542_-	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_000284436.1|48725_50195_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000040866.1|50187_51009_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000011542.1|51279_51882_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000669862.1|51862_52036_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000434933.1|52327_52654_-	staphostatin A	NA	NA	NA	NA	NA
WP_000827746.1|52684_53851_-|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000572878.1|54710_56006_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|56114_56417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272056.1|56588_57281_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|57277_59470_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774556.1|59473_61477_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
>prophage 2
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	68651	71041	2876735		Catovirus(50.0%)	2	NA	NA
WP_001231451.1|68651_69599_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147865.1|69679_71041_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.6	1.4e-103
>prophage 3
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	74459	75014	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000613738.1|74459_75014_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 4
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	78465	78879	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001557448.1|78465_78879_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	38.3	6.7e-17
>prophage 5
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	83933	84563	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|83933_84563_+	two-component system response regulator VraR	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 6
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	100043	101780	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|100043_101780_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 7
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	119847	120570	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_000590809.1|119847_120570_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
>prophage 8
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	131167	131512	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290301.1|131167_131512_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
>prophage 9
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	141142	141883	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216874.1|141142_141883_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
>prophage 10
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	149667	152214	2876735		Staphylococcus_phage(100.0%)	3	NA	NA
WP_010922839.1|149667_150450_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000821658.1|150731_151451_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_000713847.1|151485_152214_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
>prophage 11
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	161489	218130	2876735	tRNA,protease,transposase	Staphylococcus_phage(95.56%)	57	NA	NA
WP_000878802.1|161489_162410_+	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	2.3e-174
WP_150073880.1|162411_163395_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	4.0e-185
WP_000543854.1|163764_164556_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550252.1|164560_165034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092780.1|165980_166562_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_001039427.1|167528_168236_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001039454.1|168360_169083_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001038872.1|169140_169860_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_150073881.1|169980_170700_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	98.7	6.6e-129
WP_001038752.1|170853_171573_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_001791797.1|171635_171770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000028669.1|171933_173490_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_150073882.1|173482_174631_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	66.5	2.6e-127
WP_001792025.1|175788_175890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|176012_176108_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_000414216.1|177462_178035_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_000627540.1|178135_178477_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000669024.1|178517_179144_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000070642.1|179218_180214_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_001795210.1|180294_180945_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_012840523.1|181247_181703_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_000348364.1|181861_183340_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_000778528.1|183344_184346_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000718107.1|184342_184600_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|184665_185139_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001822900.1|185143_185890_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000109906.1|186267_187860_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933820.1|188231_189428_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366163.1|189549_190458_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453306.1|190669_191503_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000623470.1|193499_193853_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_001200542.1|193849_194215_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091442.1|194470_194773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096495.1|195032_195746_+	transaldolase	NA	M1PR54	Cyanophage	35.3	9.4e-19
WP_001168903.1|196185_196821_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|197116_197560_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|197546_197990_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671057.1|198102_198573_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_000384171.1|198771_198996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000195429.1|199123_200296_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001032833.1|200603_201458_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989121.1|201544_202837_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|202836_203151_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261668.1|203673_205176_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000077358.1|205656_206700_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_000493887.1|206706_207339_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_001159037.1|207349_208531_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008549.1|208543_209008_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196362.1|209129_210131_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001790712.1|210242_210362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|210364_211192_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|211763_212165_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|212287_212851_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|212847_213801_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025067.1|213910_215092_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_001557386.1|215379_217797_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_000836461.1|217818_218130_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
>prophage 12
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	225133	226402	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000285020.1|225133_226402_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
>prophage 13
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	237807	243135	2876735		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091387.1|237807_238665_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_150073884.1|238693_239290_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118314.1|239310_243135_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 14
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	251875	253582	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862095.1|251875_253582_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.8	2.1e-274
>prophage 15
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	260186	262817	2876735	tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|260186_261449_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|261542_262817_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 16
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	266586	270719	2876735		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808849.1|266586_268191_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291420.1|268177_269335_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553924.1|269449_269896_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174284.1|269975_270719_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.4	1.7e-18
>prophage 17
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	289831	293029	2876735		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226919.1|289831_293029_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.5	4.2e-135
>prophage 18
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	297962	299720	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232647.1|297962_299720_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 19
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	304604	312768	2876735		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|304604_305309_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_015445861.1|305308_306970_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_150073885.1|307468_308956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038317.1|309249_311880_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114454.1|311895_312768_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.6e-42
>prophage 20
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	316683	393625	2876735	integrase,tRNA,protease,transposase	uncultured_Mediterranean_phage(12.0%)	75	326096:326114	373680:373698
WP_000808621.1|316683_317604_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|317696_317819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435143.1|318016_319954_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.8	5.0e-115
WP_000049145.1|320379_321873_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|322101_322629_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|322657_322858_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|322904_323261_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|323402_324011_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280022.1|324029_324959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|324963_325074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127573.1|325121_326423_+	trigger factor	NA	NA	NA	NA	NA
326096:326114	attL	ACAACAAGGTTTAGATTTA	NA	NA	NA	NA
WP_000472302.1|326573_327836_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
WP_000867697.1|327989_328580_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000545451.1|328796_330143_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_001157329.1|330164_330980_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_001230232.1|331021_331948_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_000805951.1|331969_332638_+	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_000667126.1|332640_333615_+	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_001270865.1|333662_334949_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_001788970.1|335009_335111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000177998.1|335144_336218_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_001001237.1|336440_337001_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_000425353.1|337403_340034_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
WP_001108346.1|340046_341318_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000261115.1|341587_342295_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_000868132.1|342964_344050_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_150073886.1|344046_345939_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000361059.1|345945_346323_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000067268.1|346473_347256_+	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	NA	NA	NA
WP_001072201.1|347381_348113_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_001092058.1|348646_349309_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000171859.1|349757_350042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000025835.1|350158_350356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001236734.1|350515_350989_+	DUF4930 family protein	NA	NA	NA	NA	NA
WP_000840602.1|351062_351182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000911041.1|351380_352223_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_001259925.1|352222_352753_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_000457386.1|352988_353297_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_000633692.1|353302_353623_+|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_000916187.1|353634_353919_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_000496100.1|354272_355565_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_000368902.1|355577_356033_+	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000271550.1|356046_356649_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_001005768.1|356680_357685_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|357686_358712_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|358734_359874_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|359892_360153_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|360427_362707_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000595011.1|362909_365183_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000364542.1|365204_365723_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_150073887.1|366150_368340_+	RelA/SpoT family protein	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|368351_368804_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717809.1|368800_369676_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|370136_371399_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|371414_373181_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|373513_373642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|373641_374415_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
373680:373698	attR	ACAACAAGGTTTAGATTTA	NA	NA	NA	NA
WP_000102729.1|374575_375850_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.4e-105
WP_000704122.1|375934_376357_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|376456_376639_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|376678_376825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985878.1|377061_378075_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000195429.1|378377_379550_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000409157.1|379718_380861_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000066097.1|380861_381980_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567017.1|382674_383343_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283312.1|383344_385822_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734075.1|386164_388795_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|388857_389118_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|389121_389550_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_150073888.1|389564_389873_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342258.1|390157_390796_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	3.2e-10
WP_000137774.1|390798_391722_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|391733_393002_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|393001_393625_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 21
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	400296	401517	2876735		Lactococcus_phage(100.0%)	1	NA	NA
WP_000542320.1|400296_401517_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	2.2e-52
>prophage 22
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	410303	410765	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000439693.1|410303_410765_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
>prophage 23
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	414642	416466	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_000368338.1|414642_416466_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 24
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	419960	423068	2876735		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|419960_421793_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|421928_423068_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 25
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	429538	430486	2876735		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|429538_430486_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 26
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	433539	447285	2876735	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_001030080.1|433539_434931_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001797828.1|435265_435889_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|435899_436718_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217257.1|436778_438596_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
WP_001283055.1|438819_439926_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624577.1|440056_440734_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683940.1|440736_441837_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_150073890.1|441950_443297_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924220.1|443306_444197_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001213908.1|444322_445108_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564315.1|445149_446013_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|445999_446410_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|446685_447285_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 27
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	453458	454082	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|453458_454082_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 28
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	459626	462438	2876735		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019691.1|459626_460973_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.2	1.7e-61
WP_000202188.1|460965_462438_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
>prophage 29
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	469938	476509	2876735		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|469938_471276_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|471268_471499_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183383.1|471476_472358_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.8	2.0e-10
WP_001124985.1|472789_473242_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942210.1|473257_474937_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291533.1|475087_476509_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 30
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	483338	484745	2876735		Synechococcus_phage(100.0%)	1	NA	NA
WP_001668988.1|483338_484745_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	7.3e-31
>prophage 31
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	491171	492656	2876735		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|491171_492656_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 32
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	496183	591291	2876735	integrase,tail,portal,head,terminase,holin,tRNA,plate,protease,capsid	Staphylococcus_phage(78.57%)	117	507589:507617	553973:554001
WP_001171335.1|496183_497092_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.0	4.4e-05
WP_000365240.1|497173_497716_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|497820_498270_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|498318_499206_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|499283_499790_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|499881_500613_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368656.1|500605_501148_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|501140_501878_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|502010_502736_+	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987775.1|502716_504468_+	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
WP_001557355.1|504711_505638_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001558502.1|505630_507658_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	1.6e-116
507589:507617	attL	ACCATCACATTATGATGATATGTTTATTT	NA	NA	NA	NA
WP_000264751.1|507700_508906_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_000191464.1|509031_509646_+	hypothetical protein	NA	M9QRQ8	Staphylococcus_phage	99.5	2.5e-105
WP_001795334.1|509642_509789_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_150073891.1|510066_510603_-	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	99.4	4.5e-58
WP_000525004.1|510620_511082_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333630.1|511094_511409_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_001121027.1|511560_511797_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|511810_512587_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_000939498.1|512615_512759_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000642492.1|512748_512958_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_001025401.1|513013_513259_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|513227_513593_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|513647_513863_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124198.1|513887_514151_+	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001285948.1|514162_514324_+	DUF1270 domain-containing protein	NA	A9CR58	Staphylococcus_phage	98.1	1.1e-20
WP_000174998.1|514401_514725_+	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
WP_000985977.1|514739_515102_+	hypothetical protein	NA	A0A0K1LKE9	Staphylococcus_phage	95.0	3.0e-53
WP_061740011.1|515098_516265_+	DUF2800 domain-containing protein	NA	A0A2K9VBU5	Staphylococcus_phage	99.7	9.1e-221
WP_000645045.1|516290_516848_+	DUF2815 family protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
WP_078064460.1|516915_518868_+	DNA polymerase	NA	A0A2K9VBT3	Staphylococcus_phage	100.0	0.0e+00
WP_001164629.1|518880_519066_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_000113974.1|519065_519467_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_000022738.1|519466_519721_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	97.6	8.2e-42
WP_060474161.1|519720_519969_+	hypothetical protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.2e-40
WP_150073892.1|519982_520189_+	hypothetical protein	NA	A0A0N9BAW9	Staphylococcus_phage	97.1	1.1e-33
WP_031788908.1|520191_520593_+	hypothetical protein	NA	A0A2I6PDC0	Staphylococcus_phage	99.2	3.5e-71
WP_000979209.1|520589_520937_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000144708.1|520933_521242_+	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
WP_150073893.1|521234_521489_+	DUF1024 family protein	NA	Q4ZBK5	Staphylococcus_phage	94.0	3.0e-36
WP_000714407.1|521475_521646_+	hypothetical protein	NA	A0A1W6JQ22	Staphylococcus_phage	100.0	5.7e-23
WP_001066456.1|521638_522175_+	dUTP diphosphatase	NA	B5WZN1	Staphylococcus_phage	100.0	5.5e-96
WP_000195806.1|522211_522448_+	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
WP_000483477.1|522472_522709_+	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
WP_025173988.1|522701_522854_+	transcriptional regulator	NA	A7TWI2	Staphylococcus_phage	98.0	3.4e-19
WP_000265252.1|522921_523122_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000884870.1|523409_525857_+	virulence-associated E family protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
WP_001801650.1|525965_526064_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
WP_000665205.1|526197_526488_+	VRR-NUC domain-containing protein	NA	U5U7A3	Staphylococcus_phage	100.0	4.9e-51
WP_078367120.1|526468_527836_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.8	2.5e-262
WP_000513699.1|527848_528286_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_000160689.1|528442_528757_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|528885_529191_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000153555.1|529180_530872_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_001100671.1|530876_532115_+|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
WP_000061862.1|532098_532872_+|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	98.4	3.0e-135
WP_001142738.1|532883_534047_+|capsid	phage major capsid protein	capsid	M9QQM0	Staphylococcus_phage	100.0	4.2e-218
WP_000050973.1|534115_534394_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000395495.1|534405_534738_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	8.2e-58
WP_000110020.1|534734_535136_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|535136_535532_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807541.1|535566_536208_+|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	99.1	5.0e-120
WP_000169127.1|536299_536755_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|536812_537163_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|537204_537363_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_150073894.1|537376_543577_+|tail	phage tail tape measure protein	tail	U5U762	Staphylococcus_phage	99.4	0.0e+00
WP_020444679.1|543576_544401_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	1.2e-158
WP_000384474.1|544409_545993_+|tail	phage tail protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179860.1|545992_546283_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
WP_000429552.1|546298_548209_+	hypothetical protein	NA	A0A2K9VBU3	Staphylococcus_phage	100.0	0.0e+00
WP_150073895.1|548208_549675_+|plate	BppU family phage baseplate upper protein	plate	A0A2I6PEI6	Staphylococcus_phage	92.2	4.3e-252
WP_001166599.1|549674_550064_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|550056_550221_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|550266_550566_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000339146.1|550701_551004_+|holin	phage holin	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
WP_000909213.1|551014_552469_+	N-acetylmuramoyl-L-alanine amidase	NA	U5U7D2	Staphylococcus_phage	100.0	2.6e-289
WP_000528632.1|553158_553716_+	hypothetical protein	NA	W5R8Q1	Staphylococcus_phage	100.0	5.7e-104
WP_000470336.1|553991_554177_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	1.7e-25
553973:554001	attR	ACCATCACATTATGATGATATGTTTATTT	NA	NA	NA	NA
WP_000476865.1|554266_555172_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476346.1|555229_556126_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001557351.1|556201_556456_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000913243.1|556596_557553_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186912.1|557954_558500_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151997.1|558605_558854_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|558961_559915_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000902099.1|559904_561284_+	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
WP_000069289.1|561436_562897_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_001792205.1|563021_563138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001174258.1|563298_564285_+	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_000681757.1|564399_565368_-	asparaginase	NA	NA	NA	NA	NA
WP_000644391.1|565444_566104_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_001795818.1|566134_566287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_150073896.1|566367_566559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000133961.1|566815_567991_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000165530.1|568212_569523_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000161745.1|569539_570538_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001043863.1|570708_570981_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|571411_571984_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|571986_572712_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001096471.1|572713_573673_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|573764_574214_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|574422_574623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269921.1|575008_576175_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000776312.1|576200_577265_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_000253231.1|577274_578573_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000389524.1|578579_579824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000005212.1|579837_580413_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_000154683.1|580402_580990_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_001827022.1|581061_581742_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000839926.1|582077_582395_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000690025.1|582638_583781_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000361540.1|583785_584988_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_000049921.1|584974_585946_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|585969_588663_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858779.1|588984_590277_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000362218.1|590604_591291_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
>prophage 33
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	595031	595709	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_001795446.1|595031_595709_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.9e-24
>prophage 34
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	604983	605862	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_001133021.1|604983_605862_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 35
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	644705	654095	2876735		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|644705_645410_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_031888515.1|645654_645849_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|645860_646112_+	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000404645.1|646149_647274_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|647289_647727_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934894.1|648150_649107_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|649306_649786_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166063.1|649800_650640_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	76.5	1.5e-47
WP_000159900.1|650725_651259_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|651251_651680_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473653.1|651691_652192_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|652191_652413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342131.1|652604_654095_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.2	2.3e-22
>prophage 36
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	657500	660848	2876735	transposase	Staphylococcus_phage(33.33%)	3	NA	NA
WP_000195429.1|657500_658673_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000192137.1|658836_659496_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|659492_660848_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 37
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	667013	667805	2876735		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|667013_667805_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 38
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	671345	676380	2876735	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138415.1|671345_672482_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	9.7e-34
WP_001788788.1|672513_673143_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_001215907.1|673161_673431_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|673593_673902_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|674072_674273_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_150073898.1|674470_674875_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|675114_676380_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 39
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	684427	686029	2876735		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|684427_686029_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 40
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	691118	694572	2876735		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|691118_691970_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|691976_692618_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_001668958.1|692757_694572_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	8.8e-154
>prophage 41
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	697986	698688	2876735		Tupanvirus(100.0%)	1	NA	NA
WP_000571259.1|697986_698688_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.0e-13
>prophage 42
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	706785	709140	2876735		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153613.1|706785_707568_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	35.9	2.7e-27
WP_000173833.1|707569_708568_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000604816.1|708573_709140_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
>prophage 43
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	713458	714721	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_150073901.1|713458_714721_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.6	3.1e-97
>prophage 44
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	724379	728773	2876735		Bacillus_phage(50.0%)	2	NA	NA
WP_001289546.1|724379_726782_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.4	1.8e-93
WP_001812162.1|726781_728773_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.4	5.2e-115
>prophage 45
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	734764	736411	2876735		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|734764_736411_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 46
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	740083	741205	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691301.1|740083_741205_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 47
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	745355	751011	2876735		Phage_Wrath(25.0%)	6	NA	NA
WP_001208755.1|745355_745979_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_001797872.1|746358_747375_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	1.1e-15
WP_150073902.1|747396_748374_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.4	5.2e-185
WP_001085655.1|748530_748800_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|749253_749403_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082539.1|749493_751011_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
>prophage 48
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	761151	765428	2876735		Bacillus_phage(50.0%)	5	NA	NA
WP_000841351.1|761151_761685_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|761823_762012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|762124_762727_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670307.1|762723_763815_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000593436.1|764519_765428_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 49
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	771087	771273	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000006110.1|771087_771273_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
>prophage 50
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	775113	775311	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001793526.1|775113_775311_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
>prophage 51
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	780380	780857	2876735		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|780380_780857_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 52
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	786799	793281	2876735		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|786799_787618_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|788092_788635_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516269.1|788640_790650_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_000073352.1|790662_793281_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 53
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	802695	803739	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|802695_803739_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 54
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	807937	813604	2876735		Bacillus_virus(33.33%)	4	NA	NA
WP_000664775.1|807937_809224_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	28.4	7.9e-16
WP_000089941.1|809223_810489_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_001293312.1|810519_811233_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000035746.1|811237_813604_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	7.3e-84
>prophage 55
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	818618	830431	2876735	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|818618_819590_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282298.1|819604_820522_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|820690_821041_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043635.1|821426_823544_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|823548_823866_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|823862_824147_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097460.1|824167_825343_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036633.1|825363_825831_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_150073957.1|826120_830431_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 56
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	834704	835475	2876735		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473699.1|834704_835475_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 57
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	840257	853929	2876735	protease,tRNA	Erwinia_phage(16.67%)	11	NA	NA
WP_000379044.1|840257_841661_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	2.9e-27
WP_000072681.1|841726_842272_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015601.1|842268_843165_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	3.6e-31
WP_000195254.1|843582_844890_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001557331.1|845045_847121_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593194.1|847294_848167_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672869.1|848339_849584_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041666.1|849611_850730_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110248.1|850956_851865_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	5.0e-17
WP_001020801.1|851886_853053_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176393.1|853161_853929_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 58
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	867313	869563	2876735		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|867313_868045_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|868160_868394_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|868828_869563_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 59
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	879933	881928	2876735		Moumouvirus(100.0%)	1	NA	NA
WP_000579563.1|879933_881928_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 60
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	885075	886011	2876735	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161291.1|885075_886011_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 61
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	891023	893280	2876735		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|891023_892223_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|892438_892657_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368226.1|892656_893280_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	1.0e-21
>prophage 62
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	896594	897206	2876735		Pandoravirus(100.0%)	1	NA	NA
WP_001040248.1|896594_897206_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	1.6e-27
>prophage 63
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	901173	905784	2876735		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|901173_902274_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_150073906.1|902275_903550_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|903567_904449_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|904476_905784_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 64
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	910248	913002	2876735	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_001668937.1|910248_913002_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	27.9	8.0e-90
>prophage 65
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	932585	932774	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245796.1|932585_932774_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	2.5e-19
>prophage 66
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	941790	943750	2876735		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001802045.1|941790_942015_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|941971_942118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150073908.1|942847_943750_+	alpha-hemolysin	NA	A0A2H4PQH7	Staphylococcus_phage	31.4	4.1e-35
>prophage 67
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	960721	1028902	2876735	tail,portal,head,holin,terminase,plate,tRNA,capsid	Staphylococcus_phage(79.1%)	87	NA	NA
WP_001018928.1|960721_961036_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249276.1|961208_963557_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.1	4.7e-14
WP_000161938.1|963566_965279_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
WP_000234068.1|965351_965873_-	CvpA family protein	NA	NA	NA	NA	NA
WP_000046704.1|965873_966140_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_001284282.1|966509_967448_+	ribonuclease HIII	NA	NA	NA	NA	NA
WP_000908969.1|967879_970282_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000003566.1|970281_971340_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
WP_000435374.1|971719_972460_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_001788617.1|972699_972807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000670950.1|972843_973167_-	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA	NA
WP_001242427.1|973185_973920_-	class B sortase	NA	NA	NA	NA	NA
WP_001548422.1|973981_974950_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_150073910.1|974959_975838_-	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA	NA
WP_001246685.1|975834_976911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000789821.1|976910_977594_-	heme uptake protein IsdC	NA	NA	NA	NA	NA
WP_000160859.1|977802_978855_+	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA	NA
WP_001041583.1|979057_980995_+	heme uptake protein IsdB	NA	NA	NA	NA	NA
WP_001148136.1|981432_982878_-	SH3 domain-containing protein	NA	Q08JW9	Staphylococcus_phage	99.8	1.8e-295
WP_000354127.1|982858_983296_-|holin	phage holin	holin	Q8SDS8	Staphylococcus_phage	99.3	6.9e-73
WP_000398870.1|983351_983747_-	hypothetical protein	NA	A0A0E3XBL9	Staphylococcus_phage	97.7	1.4e-67
WP_000276646.1|983752_984991_-|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	98.1	2.7e-207
WP_000524006.1|985003_986902_-	glucosaminidase domain-containing protein	NA	Q8SDT1	Staphylococcus_phage	99.8	0.0e+00
WP_000466784.1|987038_987338_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000782200.1|987378_987552_-	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000705911.1|987555_987933_-	DUF2977 domain-containing protein	NA	Q9FZY7	Staphylococcus_virus	99.2	3.4e-60
WP_001668932.1|987932_989756_-|plate	BppU family phage baseplate upper protein	plate	W5R8J5	Staphylococcus_phage	99.0	9.7e-294
WP_001668931.1|989755_991666_-	hypothetical protein	NA	Q4ZDL3	Staphylococcus_virus	100.0	0.0e+00
WP_150073911.1|991680_993582_-|tail	phage tail protein	tail	I1W634	Staphylococcus_phage	99.8	0.0e+00
WP_001668930.1|993590_994538_-|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	99.7	1.4e-182
WP_001668929.1|994550_998018_-	hypothetical protein	NA	A0A0F6N3F9	Staphylococcus_phage	99.8	9.3e-245
WP_000105584.1|998034_998379_-	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_001100161.1|998408_998774_-	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000002577.1|998835_999417_-|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
WP_000188649.1|999435_999819_-	hypothetical protein	NA	A0A0F6N3L1	Staphylococcus_phage	100.0	1.5e-68
WP_001017815.1|999830_1000178_-	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_001268312.1|1000177_1000480_-	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_000208960.1|1000476_1000809_-|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001668928.1|1000817_1001105_-	hypothetical protein	NA	Q8SDU4	Staphylococcus_phage	98.9	3.1e-45
WP_000438502.1|1001126_1002101_-|capsid	phage major capsid protein	capsid	Q8SDU5	Staphylococcus_phage	100.0	1.3e-183
WP_001668927.1|1002114_1002735_-	DUF4355 domain-containing protein	NA	B2ZYY4	Staphylococcus_phage	98.5	6.6e-77
WP_000072202.1|1002843_1003014_-	hypothetical protein	NA	B2ZYY3	Staphylococcus_phage	100.0	6.7e-24
WP_001668926.1|1003086_1004082_-|capsid	minor capsid protein	capsid	B2ZYY2	Staphylococcus_phage	100.0	3.4e-184
WP_001668925.1|1004088_1005624_-|portal	phage portal protein	portal	Q4ZDV9	Staphylococcus_virus	98.8	3.3e-287
WP_000169946.1|1005634_1006912_-|terminase	PBSX family phage terminase large subunit	terminase	A0EWS5	Staphylococcus_virus	100.0	3.0e-249
WP_001003271.1|1006898_1007339_-|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	100.0	4.8e-74
WP_000058632.1|1007525_1007945_-	transcriptional regulator	NA	I1W651	Staphylococcus_phage	100.0	8.1e-71
WP_000990006.1|1007959_1008106_-	hypothetical protein	NA	Q4ZDN7	Staphylococcus_virus	100.0	1.3e-15
WP_025175787.1|1008106_1008280_-	transcriptional regulator	NA	A0A0F6N3E7	Staphylococcus_phage	98.2	1.9e-21
WP_000608278.1|1008272_1008509_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_001072795.1|1008501_1008705_-	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000132921.1|1008701_1008896_-	hypothetical protein	NA	A0A2I6PEC2	Staphylococcus_phage	100.0	6.0e-29
WP_000195827.1|1008892_1009099_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	76.5	1.4e-20
WP_001668923.1|1009135_1009669_-	dUTP diphosphatase	NA	A0A059T5A7	Staphylococcus_phage	100.0	1.6e-95
WP_001065079.1|1009673_1009910_-	DUF1024 family protein	NA	A1KX83	Staphylococcus_virus	100.0	1.1e-35
WP_001126846.1|1009924_1010173_-	hypothetical protein	NA	S4V683	Staphylococcus_phage	97.6	8.8e-41
WP_001668922.1|1010173_1010533_-	hypothetical protein	NA	D2JGL0	Staphylococcus_phage	99.2	5.0e-61
WP_001187264.1|1010533_1010719_-	DUF3113 family protein	NA	D2JGK9	Staphylococcus_phage	100.0	7.0e-27
WP_000401950.1|1010718_1011126_-	RusA family crossover junction endodeoxyribonuclease	NA	D2JGK8	Staphylococcus_phage	100.0	1.7e-73
WP_000256597.1|1011370_1011529_-	hypothetical protein	NA	Q4ZBL5	Staphylococcus_phage	100.0	3.4e-22
WP_001668921.1|1011522_1012302_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	99.6	1.9e-145
WP_150073912.1|1012311_1013049_-	conserved phage C-terminal domain-containing protein	NA	Q6R839	Staphylococcus_virus	82.2	4.3e-99
WP_000371250.1|1013112_1013970_+	DUF4393 domain-containing protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
WP_001668919.1|1014075_1014747_-	hypothetical protein	NA	A7TWM9	Staphylococcus_phage	99.6	3.4e-127
WP_000704705.1|1014759_1015311_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_001668918.1|1015339_1016128_-	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	99.6	5.7e-142
WP_000815401.1|1016120_1016342_-	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_001668917.1|1016704_1016866_-	DUF1270 family protein	NA	Q4ZBM9	Staphylococcus_phage	98.1	1.9e-20
WP_086153461.1|1017045_1017693_+	hypothetical protein	NA	S4V9K2	Staphylococcus_phage	99.5	3.5e-113
WP_000939498.1|1017714_1017858_-	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000187184.1|1017897_1018122_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001668915.1|1018122_1018890_-	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	99.6	2.5e-142
WP_000108122.1|1018889_1019084_-	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001055143.1|1019346_1019679_+	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000775187.1|1019695_1020370_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_000661437.1|1020397_1021123_+	PH domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_150073913.1|1021271_1022087_+	hypothetical protein	NA	A0A0N7E0R2	Staphylococcus_phage	99.6	7.7e-150
WP_000337827.1|1022066_1022246_-	hypothetical protein	NA	Q4ZBP0	Staphylococcus_phage	100.0	3.7e-25
WP_000861313.1|1022354_1023740_+	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000290472.1|1023856_1024030_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000872158.1|1024109_1024667_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000843611.1|1024793_1025933_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000401377.1|1025994_1026477_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|1026478_1027021_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_150073914.1|1027090_1027480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|1027482_1027737_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757575.1|1027975_1028902_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	2.2e-12
>prophage 68
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1040419	1042267	2876735		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|1040419_1042267_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 69
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1050399	1059232	2876735		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|1050399_1051494_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|1051506_1052046_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|1052189_1052465_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|1052632_1054039_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863439.1|1054042_1055335_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|1055425_1056403_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|1056406_1057519_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668336.1|1057689_1058316_-	YkyA family protein	NA	NA	NA	NA	NA
WP_000957037.1|1058680_1059232_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	1.6e-13
>prophage 70
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1065244	1069624	2876735		Bacillus_virus(50.0%)	5	NA	NA
WP_001289618.1|1065244_1065478_+	glutaredoxin-like protein NrdH	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040051.1|1065714_1067433_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|1067435_1067702_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505966.1|1067855_1068398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685067.1|1068451_1069624_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
>prophage 71
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1073055	1087817	2876735		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921965.1|1073055_1074456_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|1074448_1075255_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101899.1|1075521_1076769_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709277.1|1076790_1078269_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
WP_000238669.1|1078283_1078850_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030811.1|1078852_1079881_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483720.1|1079873_1081358_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_150073915.1|1081336_1083526_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.0	2.1e-141
WP_000666806.1|1083518_1084190_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1084191_1084455_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1084454_1085159_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010413.1|1085162_1086287_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1086273_1086756_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225836.1|1086956_1087817_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	4.4e-39
>prophage 72
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1098270	1102017	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074534.1|1098270_1102017_+	bifunctional autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 73
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1105685	1156218	2876735	transposase,protease,bacteriocin	Staphylococcus_phage(25.0%)	49	NA	NA
WP_000676539.1|1105685_1106714_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.3e-16
WP_001089094.1|1106795_1107977_+|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
WP_000284458.1|1108014_1108344_+	staphostatin B	NA	NA	NA	NA	NA
WP_000184945.1|1108581_1109403_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000150197.1|1109395_1110199_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000526694.1|1110185_1111859_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000190622.1|1111845_1113207_-	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000070966.1|1113388_1114327_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000620949.1|1114378_1114930_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000867357.1|1115094_1115310_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_001790177.1|1115373_1115505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081351.1|1115550_1116510_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|1116997_1117354_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001792054.1|1117442_1117580_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_001795266.1|1117720_1118011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571167.1|1118098_1118740_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_000668627.1|1118736_1119057_-	YxeA family protein	NA	NA	NA	NA	NA
WP_000870829.1|1119059_1121024_-|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_001797239.1|1121067_1121340_-|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_001792055.1|1121349_1121451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001033865.1|1122366_1122969_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000214898.1|1122983_1123160_-	YkvS family protein	NA	NA	NA	NA	NA
WP_000668818.1|1123358_1124345_+	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000876826.1|1124425_1124644_-	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000287265.1|1124853_1125423_+	competence protein ComK	NA	NA	NA	NA	NA
WP_000414165.1|1125909_1127421_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000021865.1|1127559_1128918_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_001838748.1|1128934_1131259_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|1131477_1132281_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_150073916.1|1132582_1134145_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
WP_001795833.1|1134144_1134405_-	YueH family protein	NA	NA	NA	NA	NA
WP_000340119.1|1134385_1135870_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_000258645.1|1136302_1137478_+	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_001154223.1|1137455_1138646_+	MFS transporter	NA	NA	NA	NA	NA
WP_000600387.1|1138758_1139268_-	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_001288675.1|1139461_1140220_-	esterase family protein	NA	NA	NA	NA	NA
WP_000570687.1|1140364_1141933_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000933105.1|1142274_1143360_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000933195.1|1143556_1144327_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000395153.1|1144604_1146449_-	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000062407.1|1146458_1147844_-	magnesium transporter	NA	NA	NA	NA	NA
WP_000669923.1|1147864_1148719_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_001270834.1|1148715_1149525_-	NAD kinase	NA	NA	NA	NA	NA
WP_001242103.1|1150193_1150541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000224619.1|1150726_1151320_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_000195429.1|1151389_1152562_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_000214070.1|1152755_1153121_+	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000896697.1|1153143_1153950_+	DsbA family protein	NA	NA	NA	NA	NA
WP_000082725.1|1154409_1156218_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 74
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1162030	1164000	2876735		Bacillus_virus(100.0%)	2	NA	NA
WP_000427767.1|1162030_1163011_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.3e-15
WP_001067052.1|1163013_1164000_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	1.4e-15
>prophage 75
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1167651	1169665	2876735		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1167651_1168593_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140050.1|1168582_1169665_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 76
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1180437	1185064	2876735		Agrobacterium_phage(50.0%)	2	NA	NA
WP_000353954.1|1180437_1183047_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044230.1|1183249_1185064_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 77
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1190183	1193837	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000154921.1|1190183_1193837_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	2.0e-24
>prophage 78
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1203991	1210986	2876735		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185319.1|1203991_1204921_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_001668905.1|1205260_1206505_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1206613_1207804_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838029.1|1208111_1209239_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1209600_1209978_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1210392_1210986_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 79
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1220906	1224534	2876735		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009692.1|1220906_1222382_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	4.5e-47
WP_000046076.1|1222512_1223721_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001143495.1|1224174_1224534_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.7e-14
>prophage 80
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1228577	1231246	2876735		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1228577_1229792_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129659.1|1229788_1231246_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	2.6e-39
>prophage 81
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1246060	1249583	2876735		environmental_halophage(50.0%)	3	NA	NA
WP_001006450.1|1246060_1247311_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_000205567.1|1247416_1248724_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1248821_1249583_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 82
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1253070	1254096	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571207.1|1253070_1254096_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
>prophage 83
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1257412	1262611	2876735		Streptococcus_phage(50.0%)	7	NA	NA
WP_000589549.1|1257412_1257769_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147952.1|1257912_1258233_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422908.1|1258383_1258923_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150011.1|1259005_1259722_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000569884.1|1260690_1261185_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255551.1|1261339_1261957_+	amino acid transporter	NA	NA	NA	NA	NA
WP_001140693.1|1262029_1262611_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	5.5e-33
>prophage 84
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1265990	1267234	2876735		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1265990_1266191_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_000141557.1|1266547_1267234_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	1.7e-33
>prophage 85
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1277878	1286755	2876735		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000757397.1|1277878_1278607_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_001058299.1|1278960_1279284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085183.1|1280605_1281070_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	98.7	1.6e-80
WP_001050048.1|1281091_1283464_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.3e-92
WP_001165959.1|1283497_1284238_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1284353_1284587_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1284653_1285112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1285450_1286755_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 86
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1296094	1302025	2876735		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1296094_1296682_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1297245_1298190_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1298300_1299296_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369721.1|1299292_1300204_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1301089_1302025_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 87
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1306472	1309319	2876735		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662676.1|1306472_1309319_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 88
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1312637	1313477	2876735		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753319.1|1312637_1313477_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 89
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1319558	1325264	2876735		Streptococcus_phage(66.67%)	5	NA	NA
WP_001557172.1|1319558_1320641_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	9.9e-44
WP_000686344.1|1321004_1321871_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1322014_1322656_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258150.1|1322820_1323876_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1324193_1325264_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 90
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1334543	1358016	2876735		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|1334543_1335305_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|1335301_1336258_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1336244_1337216_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1337254_1337410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1337590_1338562_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855514.1|1338679_1340785_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1340747_1341146_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068501.1|1341946_1342813_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1342832_1343333_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1343673_1345179_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031760357.1|1345256_1345358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|1345448_1346366_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|1347244_1347787_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|1348125_1349184_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|1349423_1350938_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589248.1|1350930_1351908_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	7.1e-25
WP_000983677.1|1352129_1353911_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525106.1|1353922_1355806_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1356075_1358016_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 91
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1361155	1371002	2876735		Pandoravirus(12.5%)	12	NA	NA
WP_001217796.1|1361155_1362307_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
WP_000604514.1|1362290_1362884_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001668893.1|1363234_1363903_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.1	2.1e-65
WP_000941336.1|1363904_1364324_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1364327_1365041_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|1365139_1365724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|1366003_1366444_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1366786_1367260_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1367234_1367921_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1367920_1368976_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702778.1|1369047_1370031_-	lipoteichoic acid-specific glycosylation protein CsbB	NA	A0A192Y8W7	Salmonella_phage	43.3	1.1e-62
WP_000931238.1|1370162_1371002_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.5	9.6e-55
>prophage 92
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1382614	1383988	2876735		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952038.1|1382614_1383988_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.6	2.3e-45
>prophage 93
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1390296	1396576	2876735		Bacillus_phage(33.33%)	6	NA	NA
WP_150073918.1|1390296_1391970_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737160.1|1391966_1393598_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469894.1|1393816_1394692_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1394863_1395547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148826.1|1395549_1396008_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820897.1|1396009_1396576_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 94
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1403366	1403840	2876735		Pandoravirus(100.0%)	1	NA	NA
WP_000833486.1|1403366_1403840_-	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	39.4	1.6e-14
>prophage 95
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1409102	1409900	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1409102_1409900_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 96
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1414729	1415491	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1414729_1415491_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 97
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1419865	1420909	2876735		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030772.1|1419865_1420909_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 98
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1427432	1428230	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1427432_1428230_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 99
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1431455	1435414	2876735		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1431455_1433183_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793067.1|1433603_1434899_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1435015_1435414_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 100
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1442348	1443092	2876735		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1442348_1443092_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 101
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1455631	1456192	2876735	integrase	Streptococcus_phage(100.0%)	1	1449785:1449799	1459781:1459795
1449785:1449799	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1455631_1456192_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1455631_1456192_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1459781:1459795	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 102
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1469019	1472373	2876735		Tupanvirus(50.0%)	3	NA	NA
WP_001200747.1|1469019_1470030_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.9e-33
WP_001792725.1|1470528_1471050_-	YwhD family protein	NA	NA	NA	NA	NA
WP_000180234.1|1471077_1472373_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 103
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1475584	1494437	2876735	integrase	Streptococcus_phage(100.0%)	20	1475560:1475573	1494676:1494689
1475560:1475573	attL	ATAAGTAGTAAATT	NA	NA	NA	NA
WP_001291561.1|1475584_1476802_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|1476883_1477087_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|1477547_1477778_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|1477774_1478197_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|1478701_1479055_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|1479114_1479282_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_172619360.1|1480731_1481772_-	elongation factor G	NA	A0A1S5SF82	Streptococcus_phage	99.7	2.7e-200
WP_001791010.1|1482665_1482782_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224319.1|1483026_1483959_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_000769868.1|1483955_1484957_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_000804748.1|1484953_1487131_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000331160.1|1487133_1489581_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|1489564_1490071_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|1490045_1490543_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|1490659_1490881_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000398284.1|1490923_1492129_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_000879507.1|1492151_1492304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|1492306_1493692_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|1493720_1494107_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|1494122_1494437_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
1494676:1494689	attR	ATAAGTAGTAAATT	NA	NA	NA	NA
>prophage 104
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1499314	1500637	2876735		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860592.1|1499314_1500637_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.8	2.6e-107
>prophage 105
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1511941	1512598	2876735		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|1511941_1512598_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 106
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1516239	1519560	2876735		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|1516239_1517616_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_000347061.1|1518159_1519560_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 107
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1542780	1543443	2876735		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|1542780_1543443_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 108
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1550026	1551214	2876735		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|1550026_1551214_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 109
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1554242	1565196	2876735		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1554242_1556324_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1556446_1556917_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1556982_1557396_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1557493_1557748_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_001788197.1|1557884_1561481_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_150073923.1|1561644_1565196_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.2	2.3e-49
>prophage 110
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1568878	1573661	2876735	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1568878_1569427_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1569439_1569622_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1569677_1569821_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872882.1|1569935_1570505_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664737.1|1570585_1571110_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1571109_1571856_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1571863_1572268_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_150073924.1|1572260_1573661_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.0	7.2e-55
>prophage 111
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1579672	1582129	2876735	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1579672_1582129_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 112
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1595756	1606027	2876735	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1595756_1597244_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1597296_1597389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613722.1|1597782_1598259_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1598255_1598621_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167944.1|1598598_1599402_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	3.0e-21
WP_000057594.1|1599617_1600550_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148598.1|1600728_1601610_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1601837_1603931_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1604187_1604727_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176709.1|1604731_1606027_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 113
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1615283	1617748	2876735		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1615283_1616249_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252543.1|1616395_1617748_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 114
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1623674	1626772	2876735	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051129.1|1623674_1625648_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	1.5e-93
WP_000279926.1|1625932_1626772_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 115
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1630677	1631295	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1630677_1631295_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 116
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1640539	1642237	2876735		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109040.1|1640539_1642237_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 117
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1658885	1665124	2876735		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1658885_1659890_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825530.1|1660221_1661064_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1661100_1661760_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569281.1|1661763_1662789_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	3.7e-32
WP_001036648.1|1663083_1664226_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634098.1|1664218_1665124_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
>prophage 118
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1680307	1681480	2876735	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_000195429.1|1680307_1681480_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
>prophage 119
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1692646	1696494	2876735	transposase	Staphylococcus_phage(100.0%)	2	NA	NA
WP_000195429.1|1692646_1693819_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_150073926.1|1694937_1696494_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	4.0e-288
>prophage 120
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1709031	1714480	2876735	transposase	Paenibacillus_phage(25.0%)	5	NA	NA
WP_000159787.1|1709031_1709304_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041880.1|1709702_1710407_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.1	5.8e-29
WP_000551643.1|1710798_1711335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424963.1|1711447_1712989_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1713013_1714480_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 121
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1724960	1726484	2876735		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930514.1|1724960_1726484_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 122
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1734798	1741127	2876735		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1734798_1735302_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1735322_1735619_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052484.1|1735862_1736054_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001218732.1|1736139_1737237_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157348.1|1737248_1737452_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373073.1|1737481_1738363_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001557587.1|1738516_1739362_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655692.1|1740023_1741127_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
>prophage 123
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1751065	1751908	2876735		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209551.1|1751065_1751908_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	3.8e-11
>prophage 124
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1773215	1775950	2876735		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280799.1|1773215_1774238_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191954.1|1774215_1775160_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449069.1|1775149_1775950_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	5.8e-41
>prophage 125
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1794187	1794865	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911017.1|1794187_1794865_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.6e-31
>prophage 126
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1806384	1810824	2876735		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549287.1|1806384_1810824_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.6	6.3e-28
>prophage 127
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1821427	1823089	2876735		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570070.1|1821427_1822087_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736784.1|1822138_1823089_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 128
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1831887	1833324	2876735		Pandoravirus(100.0%)	1	NA	NA
WP_000164003.1|1831887_1833324_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.7	1.1e-29
>prophage 129
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1837084	1841623	2876735		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000950281.1|1837084_1838839_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	9.0e-63
WP_000608818.1|1839083_1839758_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975351.1|1839901_1841623_-	poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 130
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1850950	1851994	2876735		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|1850950_1851994_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 131
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1859208	1860738	2876735		Vibrio_phage(100.0%)	1	NA	NA
WP_000838205.1|1859208_1860738_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	50.7	4.5e-10
>prophage 132
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1869613	1871119	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008400.1|1869613_1871119_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 133
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1882226	1887585	2876735		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1882226_1884476_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837116.1|1885063_1886032_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127990.1|1886028_1887585_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 134
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1897794	1899854	2876735		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818915.1|1897794_1898892_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166920.1|1899275_1899854_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.1	9.7e-14
>prophage 135
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1908404	1911591	2876735		Planktothrix_phage(33.33%)	4	NA	NA
WP_000067352.1|1908404_1909997_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	4.1e-22
WP_000794565.1|1910506_1910704_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000739160.1|1910693_1910882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000960712.1|1910868_1911591_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
>prophage 136
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1916783	1917464	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|1916783_1917464_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 137
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1934267	1935452	2876735		Klosneuvirus(100.0%)	1	NA	NA
WP_001084442.1|1934267_1935452_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	2.0e-34
>prophage 138
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1940288	1950572	2876735		Tupanvirus(50.0%)	3	NA	NA
WP_000605281.1|1940288_1947464_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	29.7	4.5e-68
WP_000826862.1|1947910_1949161_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706135.1|1949546_1950572_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.5	8.5e-29
>prophage 139
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1954108	1957339	2876735		Bacillus_virus(50.0%)	4	NA	NA
WP_000590854.1|1954108_1954849_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.1	2.5e-38
WP_000171919.1|1955190_1955703_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1955881_1956085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013485.1|1956379_1957339_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 140
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1960680	1963165	2876735		Catovirus(50.0%)	2	NA	NA
WP_000723436.1|1960680_1961826_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	25.9	4.6e-23
WP_000779504.1|1961902_1963165_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	4.3e-22
>prophage 141
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1970000	1976565	2876735		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1970000_1971125_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028283.1|1971128_1972238_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1972250_1973279_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940790.1|1973268_1975092_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000565304.1|1975111_1975876_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037332.1|1975878_1976565_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 142
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1980585	1983602	2876735	transposase	Clostridium_phage(50.0%)	2	NA	NA
WP_000469833.1|1980585_1981761_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	27.6	2.0e-29
WP_000195429.1|1982429_1983602_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
>prophage 143
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1988532	1989306	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1988532_1989306_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 144
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	1997337	1997937	2876735		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1997337_1997937_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 145
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2002874	2007971	2876735		Catovirus(50.0%)	6	NA	NA
WP_001793242.1|2002874_2003855_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
WP_001789407.1|2003924_2004047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000183771.1|2004190_2004967_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_000414629.1|2005178_2005805_-	MFS transporter	NA	NA	NA	NA	NA
WP_001015549.1|2006000_2006765_-	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA	NA
WP_001223713.1|2006768_2007971_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.9e-09
>prophage 146
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2016237	2020447	2876735		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|2016237_2017218_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|2017448_2018441_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924990.1|2018456_2019452_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136633.1|2019448_2020447_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	5.2e-15
>prophage 147
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2053390	2054455	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816133.1|2053390_2054455_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.8	7.7e-09
>prophage 148
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2062229	2072239	2876735		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|2062229_2063030_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104165.1|2063418_2064207_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_001060140.1|2064207_2065542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|2065534_2067361_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|2067373_2068075_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_150073934.1|2069277_2070561_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	2.3e-68
WP_000375647.1|2070838_2072239_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 149
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2078929	2084013	2876735	tRNA	uncultured_Mediterranean_phage(33.33%)	3	NA	NA
WP_000884332.1|2078929_2080216_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.9	4.5e-88
WP_000177465.1|2080594_2082109_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.4	1.2e-90
WP_000393259.1|2083620_2084013_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
>prophage 150
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2087913	2092554	2876735		Bacillus_virus(100.0%)	2	NA	NA
WP_001669079.1|2087913_2090583_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	2.7e-119
WP_000255578.1|2090619_2092554_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 151
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2102654	2109211	2876735		Faecalibacterium_phage(25.0%)	8	NA	NA
WP_000742837.1|2102654_2103494_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2103944_2104298_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|2104365_2104761_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054128.1|2105020_2105590_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2105707_2105908_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000672033.1|2106299_2106491_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_000143647.1|2106582_2108463_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154162.1|2108452_2109211_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 152
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2123464	2125177	2876735		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138654.1|2123464_2125177_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 153
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2130804	2131818	2876735		Faustovirus(100.0%)	1	NA	NA
WP_000639184.1|2130804_2131818_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	25.9	9.6e-09
>prophage 154
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2144157	2144850	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|2144157_2144850_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 155
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2170948	2172808	2876735		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125628.1|2170948_2172808_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 156
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2198509	2200260	2876735		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143425.1|2198509_2199397_+	nisin susceptibility-associated two-component system sensor histidine kinase NsaS	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2199504_2200260_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 157
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2203680	2204178	2876735		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2203680_2204178_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 158
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2209173	2211557	2876735		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071729.1|2209173_2211024_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	9.3e-236
WP_000173331.1|2211020_2211557_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 159
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2216435	2226549	2876735	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|2216435_2218145_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|2218422_2218635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028775.1|2218914_2219358_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172341.1|2219551_2221150_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001791980.1|2221209_2221539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2221834_2223331_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031409.1|2223524_2224415_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237629.1|2224537_2224954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030072.1|2225211_2226549_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 160
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2234738	2235824	2876735	integrase	Clostridium_phage(100.0%)	1	2233877:2233896	2241942:2241961
2233877:2233896	attL	GTTGCAATTTTATCAGTGTT	NA	NA	NA	NA
WP_000868132.1|2234738_2235824_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_000868132.1|2234738_2235824_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
2241942:2241961	attR	GTTGCAATTTTATCAGTGTT	NA	NA	NA	NA
>prophage 161
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2239155	2239887	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|2239155_2239887_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 162
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2263595	2267385	2876735		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751263.1|2263595_2264297_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	5.2e-38
WP_000996739.1|2264572_2265061_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|2265573_2267385_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 163
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2275819	2280061	2876735		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161369.1|2275819_2276818_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	1.0e-34
WP_000076661.1|2276908_2277115_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024139.1|2277652_2280061_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.8	3.2e-127
>prophage 164
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2289305	2292341	2876735	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058993.1|2289305_2291411_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455988.1|2291819_2292341_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 165
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2298767	2305151	2876735		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062663.1|2298767_2300507_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473678.1|2300807_2302874_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206031.1|2303253_2303664_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240663.1|2303705_2304062_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228167.1|2304182_2305151_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	4.0e-12
>prophage 166
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2314440	2315433	2876735		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161545.1|2314440_2315433_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.7	3.7e-37
>prophage 167
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2324711	2325407	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000538625.1|2324711_2325407_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	3.0e-38
>prophage 168
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2345802	2346669	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2345802_2346669_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 169
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2357168	2358977	2876735		Streptococcus_phage(100.0%)	1	NA	NA
WP_001835549.1|2357168_2358977_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.3	3.9e-93
>prophage 170
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2370206	2370902	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000217456.1|2370206_2370902_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 171
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2375456	2376275	2876735		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824948.1|2375456_2376275_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	27.2	1.3e-08
>prophage 172
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2384327	2385885	2876735		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173871.1|2384327_2385143_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	8.8e-13
WP_000598772.1|2385135_2385885_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	9.0e-20
>prophage 173
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2396233	2397586	2876735		Pandoravirus(100.0%)	1	NA	NA
WP_000700925.1|2396233_2397586_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
>prophage 174
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2400980	2402839	2876735		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948974.1|2400980_2402207_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|2402203_2402839_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 175
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2420567	2426829	2876735		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|2420567_2421710_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779360.1|2421977_2422364_+	flippase GtxA	NA	NA	NA	NA	NA
WP_000482652.1|2422497_2422605_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064825.1|2423307_2425071_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	2.5e-36
WP_000486487.1|2425095_2426829_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 176
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2430290	2436061	2876735		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971550.1|2430290_2431406_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|2431416_2432109_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200956.1|2432119_2432587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000783428.1|2432638_2433616_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916704.1|2433617_2434565_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000594519.1|2435131_2436061_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 177
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2444073	2444805	2876735		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|2444073_2444805_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 178
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2461455	2463015	2876735		Escherichia_phage(100.0%)	1	NA	NA
WP_000692648.1|2461455_2463015_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 179
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2484282	2485317	2876735		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|2484282_2485317_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 180
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2495162	2499059	2876735		Hokovirus(33.33%)	4	NA	NA
WP_000477338.1|2495162_2496536_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	2.3e-13
WP_000249497.1|2496528_2497203_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|2497338_2498394_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229920.1|2498393_2499059_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.6e-36
>prophage 181
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2502798	2504007	2876735		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2502798_2504007_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 182
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2516097	2516997	2876735		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524830.1|2516097_2516997_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	1.2e-15
>prophage 183
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2524369	2524789	2876735		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|2524369_2524789_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 184
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2530421	2531303	2876735		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_150073945.1|2530421_2531303_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	8.5e-62
>prophage 185
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2539181	2539817	2876735		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2539181_2539817_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 186
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2552623	2556741	2876735		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000739224.1|2552623_2553400_+	glucosaminidase domain-containing protein	NA	H9A0P7	Staphylococcus_phage	41.0	3.8e-37
WP_000684147.1|2553710_2554835_+	FAD-dependent monooxygenase	NA	A0A2K9L3K5	Tupanvirus	22.8	9.3e-13
WP_000417018.1|2554926_2555880_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	6.4e-31
WP_000737705.1|2556240_2556741_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 187
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2560658	2561462	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|2560658_2561462_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 188
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2580230	2580836	2876735		Pithovirus(100.0%)	1	NA	NA
WP_000913024.1|2580230_2580836_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.1	4.3e-12
>prophage 189
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2592808	2595976	2876735		Leptospira_phage(100.0%)	1	NA	NA
WP_150073947.1|2592808_2595976_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	1.1e-61
>prophage 190
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2619659	2621326	2876735		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389658.1|2619659_2620469_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	1.7e-19
WP_000155386.1|2620465_2621326_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 191
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2630109	2637766	2876735		Enterobacteria_phage(33.33%)	7	NA	NA
WP_000411031.1|2630109_2631126_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	29.7	1.0e-18
WP_000655241.1|2631699_2631882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000130149.1|2632375_2634040_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000186134.1|2634076_2634781_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000769705.1|2635164_2635590_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044362.1|2635885_2636701_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001044441.1|2636911_2637766_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	4.9e-06
>prophage 192
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2641148	2643458	2876735		Staphylococcus_phage(50.0%)	4	NA	NA
WP_001015500.1|2641148_2641997_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_000875476.1|2642229_2642433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001791678.1|2642519_2642681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001557494.1|2642717_2643458_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.5e-14
>prophage 193
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2649778	2651188	2876735		Pandoravirus(100.0%)	1	NA	NA
WP_150073949.1|2649778_2651188_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.7	2.1e-46
>prophage 194
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2655155	2656718	2876735		Vibrio_phage(100.0%)	1	NA	NA
WP_000792342.1|2655155_2656718_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 195
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2668253	2669222	2876735		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|2668253_2669222_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 196
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2685092	2686001	2876735		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|2685092_2686001_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 197
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2689592	2697038	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001669057.1|2689592_2697038_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	31.5	3.9e-22
>prophage 198
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2703294	2706114	2876735		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334463.1|2703294_2705100_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
WP_000908182.1|2705331_2706114_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
>prophage 199
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2717294	2721125	2876735		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2717294_2717738_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2717858_2718569_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083318.1|2718882_2719545_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242311.1|2719823_2721125_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 200
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2729065	2730676	2876735		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2729065_2730676_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 201
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2738479	2746229	2876735		Bacillus_virus(25.0%)	9	NA	NA
WP_000273358.1|2738479_2739079_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|2739079_2740156_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248732.1|2740142_2740979_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000379895.1|2741062_2742109_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.3	2.2e-40
WP_000697334.1|2742105_2742525_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654184.1|2742631_2743156_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2743182_2744421_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2744448_2745078_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2745101_2746229_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 202
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2756632	2757028	2876735		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2756632_2757028_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 203
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2763299	2763947	2876735		Moumouvirus(100.0%)	1	NA	NA
WP_001187630.1|2763299_2763947_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	8.0e-09
>prophage 204
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2771147	2772668	2876735		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2771147_2772668_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 205
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2779858	2781886	2876735		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546611.1|2779858_2781886_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.5	2.3e-25
>prophage 206
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2787035	2790419	2876735		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2787035_2787398_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_086031886.1|2787746_2788748_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2788866_2789193_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|2789194_2789674_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041111.1|2789648_2790419_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	2.2e-21
>prophage 207
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2804281	2809004	2876735		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094583.1|2804281_2805811_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_168285279.1|2805824_2806859_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2806980_2807235_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047811.1|2807234_2809004_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.6	7.0e-63
>prophage 208
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2812764	2826825	2876735	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_000159041.1|2812764_2813790_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.6	3.4e-62
WP_000106332.1|2814104_2815715_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	28.1	1.9e-19
WP_001792272.1|2815803_2815932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602057.1|2816076_2818005_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.2	9.3e-53
WP_001283612.1|2818257_2818893_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000266884.1|2819196_2820276_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581076.1|2820335_2820560_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2820767_2822018_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790331.1|2822200_2823151_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000141432.1|2823299_2824784_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.5	2.3e-19
WP_001253312.1|2824780_2825740_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688492.1|2826108_2826825_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 209
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2833994	2851137	2876735	integrase,coat,terminase	Staphylococcus_phage(65.0%)	23	2835954:2835974	2851622:2851642
WP_000917289.1|2833994_2834279_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2834354_2835971_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
2835954:2835974	attL	ATGCCGGGAATGATGTAAAAC	NA	NA	NA	NA
WP_000179343.1|2836039_2837212_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	96.2	5.8e-215
WP_000620857.1|2837225_2837900_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
WP_000153640.1|2838072_2838291_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
WP_000481967.1|2838295_2838613_+	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	98.1	9.2e-51
WP_000784885.1|2838609_2838756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025175789.1|2838808_2838958_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	93.9	2.5e-19
WP_001078344.1|2838960_2839287_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	89.8	1.5e-48
WP_001002689.1|2839351_2840221_+	primase C-terminal domain-containing protein	NA	Q4ZE74	Staphylococcus_phage	96.2	1.5e-164
WP_000447473.1|2840234_2841944_+	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	92.8	1.4e-302
WP_000356942.1|2842253_2842634_+	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	96.8	1.7e-67
WP_001047698.1|2842630_2843272_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	93.0	7.2e-111
WP_001190615.1|2843721_2844063_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_000846280.1|2844074_2844653_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
WP_000448770.1|2844670_2844889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000771368.1|2844939_2845467_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_000358774.1|2845469_2845811_+	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	99.1	1.4e-57
WP_001293088.1|2845807_2846377_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.4	7.9e-101
WP_001035599.1|2846531_2847236_-	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA	NA
WP_001035616.1|2848118_2848679_-	DUF4888 domain-containing protein	NA	Q4ZBG8	Staphylococcus_virus	68.1	5.4e-62
WP_000278088.1|2849469_2850270_+	staphylococcal enterotoxin type C3	NA	A0A097PAT7	Streptococcus_pyogenes_phage	47.5	6.1e-51
WP_052997930.1|2850438_2851137_-	staphylococcal enterotoxin type L	NA	A0A1X9H080	Staphylococcus_phage	34.9	2.1e-26
2851622:2851642	attR	ATGCCGGGAATGATGTAAAAC	NA	NA	NA	NA
>prophage 210
NZ_AP020322	Staphylococcus aureus strain KUH180129	2876735	2855588	2876264	2876735	integrase	Staphylococcus_phage(97.44%)	39	2847405:2847421	2868994:2869010
2847405:2847421	attL	AACATTTTAAAGTTACA	NA	NA	NA	NA
WP_000791411.1|2855588_2856644_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595392.1|2856665_2857682_+	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000857198.1|2858800_2859838_-|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
WP_000440838.1|2860031_2860736_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	100.0	4.6e-127
WP_000705241.1|2860875_2861043_-	hypothetical protein	NA	U5U774	Staphylococcus_phage	100.0	1.7e-24
WP_000109189.1|2861112_2861298_-	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
WP_000345949.1|2861294_2861441_-	hypothetical protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
WP_001557601.1|2861514_2862369_-	restriction endonuclease	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_001083975.1|2862380_2863097_-	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_000639923.1|2863260_2863503_+	DUF739 family protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
WP_000435349.1|2863515_2863962_+	hypothetical protein	NA	A0A1W6JPI3	Staphylococcus_phage	100.0	1.9e-78
WP_000939495.1|2863976_2864117_+	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000772137.1|2864109_2864319_-	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_001148587.1|2864375_2865125_+	phage antirepressor KilAC domain-containing protein	NA	A0A1W6JPN2	Staphylococcus_phage	99.6	2.0e-136
WP_001148856.1|2865140_2865338_+	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_000762521.1|2865324_2865705_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|2865759_2866083_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2866079_2866241_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2866335_2866638_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2866642_2866903_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2866911_2867175_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700555.1|2867183_2869127_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
2868994:2869010	attR	AACATTTTAAAGTTACA	NA	NA	NA	NA
WP_150073956.1|2869128_2870049_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	99.3	2.5e-165
WP_078065370.1|2870129_2870747_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	99.4	1.2e-86
WP_000934759.1|2870747_2871218_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_000148333.1|2871247_2872141_+	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000338528.1|2872147_2872366_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401969.1|2872374_2872779_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000101279.1|2872791_2873163_+	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000111491.1|2873162_2873420_+	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000178987.1|2873416_2873665_+	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_001065108.1|2873679_2873925_+	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000185693.1|2873921_2874458_+	dUTP diphosphatase	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001282071.1|2874494_2874740_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	97.5	4.2e-35
WP_000195784.1|2874736_2874943_+	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_000595265.1|2874939_2875089_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001557462.1|2875088_2875289_+	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000590122.1|2875316_2875733_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|2875964_2876264_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
>prophage 1
NZ_AP020323	Staphylococcus aureus strain KUH180129 plasmid p01KUH180129, complete sequence	20547	11035	18308	20547	transposase,integrase	Staphylococcus_phage(50.0%)	8	NA	NA
WP_000690638.1|11035_11629_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.1	1.5e-41
WP_000790712.1|11600_13043_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000164959.1|13035_13794_+	recombinase family protein	NA	A0A0A8WIK3	Clostridium_phage	29.3	7.2e-09
WP_000120603.1|13854_14169_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4PQT4	Staphylococcus_phage	73.1	3.6e-39
WP_001838797.1|14165_15458_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.6	1.0e-188
WP_000358995.1|15475_15871_+	thioredoxin-dependent arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
WP_001807342.1|16019_16586_-	multidrug-binding transcriptional regulator QacR	NA	NA	NA	NA	NA
WP_000622776.1|16763_18308_+	quaternary ammonium compound efflux MFS transporter QacA	NA	A0A0M3UL24	Mycobacterium_phage	26.8	4.2e-32
