bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_AP020316	Staphylococcus aureus strain KUH140331	2.1|792772|26|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	92.308	26	2	0	1	26	1180974	1180949	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	1.17e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1180949-1180974	CGGGGCCCCAACACAGAAGCTGACGG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	2.1|792772|26|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	92.308	26	2	0	1	26	1096357	1096382	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	1.17e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1096357-1096382	CCGCCAGCCTCTGTGTTGGGGCCCCG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	2.1|792772|26|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	92.308	26	2	0	1	26	1225190	1225215	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	1.17e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1225190-1225215	CCGCCTGCTTTTATGTTGGGGCCCCG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	2.1|792772|26|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	92.308	26	2	0	1	26	1225246	1225271	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	1.17e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1225246-1225271	CCGTCTGCTTCTATGTTGGGGCCCCG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	2.1|792772|26|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	92.308	26	2	0	1	26	1225302	1225327	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	1.17e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1225302-1225327	CCGCCTGCTTCTGTGTTGGGGCCCCG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	667293	667321	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	667293-667321	CATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	792808	792836	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	792808-792836	CATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	878613	878641	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	878613-878641	CATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	979694	979666	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	979666-979694	AGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	1180768	1180740	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	1180740-1180768	AGCTGGCGGAAAGTCAGCTTACAATAATG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	1180938	1180910	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	1180910-1180938	AGCTGGCGGAAAGTCAGCTTACAATAATG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.1|882581|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	2450011	2450039	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	CATTTTTGTAAGCTGACTTTTCGCCAGCT	2450011-2450039	CATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.2|882637|30|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	96.667	30	1	0	1	30	882749	882778	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.01e-07	46.0	1.0	ATTGTTTGTTGGAATTGGTGATCCTATTTC	882749-882778	ATTGTCTGTTGGAATTGGTGATCCTATTTC	1
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.3|882694|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	882750	882778	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	TTGTCTGTTGAAATTGGTGATCCAATTTC	882750-882778	TTGTCTGTTGGAATTGGTGATCCTATTTC	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.3|882694|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	77526	77498	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	TTGTCTGTTGAAATTGGTGATCCAATTTC	77498-77526	GAAATTGGATTCCCAATTTCAACAGACAA	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	3.3|882694|29|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.103	29	2	0	1	29	2718210	2718182	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	4.33e-06	41.2	1.0	TTGTCTGTTGAAATTGGTGATCCAATTTC	2718182-2718210	GAAATTGGAACACCAATTTCTACAGACAA	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	9.1|1863351|36|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	97.222	36	1	0	1	36	953293	953258	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	5.51e-10	55.5	1.0	ATTGGGAATCCAATTCCTCTTTGTTGGGGCCCACAC	953258-953293	GTGTGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.1|2054027|32|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	96.875	32	1	0	1	32	1180737	1180768	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.68e-08	49.1	1.0	AGAAGCTGGCGGAAAGTCAGCCTACAATAATG	1180737-1180768	AGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.1|2054027|32|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	96.875	32	1	0	1	32	1180907	1180938	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.68e-08	49.1	1.0	AGAAGCTGGCGGAAAGTCAGCCTACAATAATG	1180907-1180938	AGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.1|2054027|32|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	96.875	32	1	0	1	32	1745122	1745091	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.68e-08	49.1	1.0	AGAAGCTGGCGGAAAGTCAGCCTACAATAATG	1745091-1745122	CATTATTGTATGCTGACTTTCCGCCAGCTTCT	1
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.1|2054027|32|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.750	32	2	0	1	32	385477	385446	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.41e-07	46.0	1.0	AGAAGCTGGCGGAAAGTCAGCCTACAATAATG	385446-385477	CATTATCGTAAGCTGACTTTCCGCCAGCTTCT	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.1|2054027|32|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.750	32	2	0	1	32	1096368	1096337	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.41e-07	46.0	1.0	AGAAGCTGGCGGAAAGTCAGCCTACAATAATG	1096337-1096368	CATTATTGTAAGCTGACTTTCCGCCAGCCTCT	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.1|2054027|32|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.750	32	2	0	1	32	1180963	1180994	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	2.41e-07	46.0	1.0	AGAAGCTGGCGGAAAGTCAGCCTACAATAATG	1180963-1180994	AGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	1234734	1234704	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	1234704-1234734	TTGTCTGTAGAAATTGGGAATCCAATTTCTC	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	2449985	2449955	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	2449955-2449985	TTGTCTGTAGAAATTGGGAATCCAATTTCTC	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	2642181	2642151	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	2642151-2642181	TTGTCTGTAGAAATTGGGAATCCAATTTCTC	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	578967	578997	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	578967-578997	GAGAAATTGGATTCCCAATTTCTACAGACAA	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	953275	953305	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	953275-953305	GAGAAATTGGATTCCCAATTTCTACAGACAA	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	1144862	1144892	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	1144862-1144892	GAGAAATTGGATTCCCAATTTCTACAGACAA	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	1188171	1188201	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	1188171-1188201	GAGAAATTGGATTCCCAATTTCTACAGACAA	2
NZ_AP020316	Staphylococcus aureus strain KUH140331	10.2|2054083|31|NZ_AP020316|CRISPRCasFinder	NZ_AP020316.1	Staphylococcus aureus strain KUH140331	93.548	31	2	0	1	31	2053972	2054002	78927-79011|792742-792827|882554-882749|901667-901758|1096360-1096438|1188082-1188168|1287523-1287621|1350458-1350551|1863328-1863409|2054003-2054137|2185101-2185208|2597563-2597653	7.22e-07	44.4	1.0	GAGAAATTGAATTCCCAGTTTCTACAGACAA	2053972-2054002	GAGAAATTGGATTCCCAATTTCTACAGACAA	2
