The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	0	24102	2761631	holin,terminase,tail,capsid,portal,protease,head	Staphylococcus_phage(100.0%)	28	NA	NA
WP_000625099.1|0_1662_+|terminase	terminase large subunit	terminase	G4KNQ0	Staphylococcus_phage	96.9	0.0e+00
WP_000511812.1|1676_2825_+|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	73.8	1.6e-161
WP_000700968.1|2821_3544_+|protease	Clp protease ClpP	protease	Q8LTH1	Staphylococcus_phage	53.1	1.0e-68
WP_000216654.1|3567_4707_+|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	70.1	8.2e-150
WP_000005716.1|4725_5004_+	hypothetical protein	NA	A0A1W6JPL8	Staphylococcus_phage	45.5	3.3e-12
WP_000344038.1|5012_5294_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	58.1	3.8e-24
WP_001231000.1|5277_5640_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	90.0	9.5e-60
WP_031788241.1|5636_6041_+	HK97 gp10 family phage protein	NA	A0A2I6PDJ6	Staphylococcus_phage	99.3	6.2e-68
WP_000565498.1|6037_6445_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268732.1|6445_7090_+|tail	phage tail protein	tail	W5R9H4	Staphylococcus_phage	99.5	3.2e-119
WP_072050172.1|7131_7356_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_001096355.1|7405_7756_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001549167.1|7806_7944_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_031788240.1|8000_12530_+|tail	phage tail tape measure protein	tail	W5R8I2	Staphylococcus_phage	97.8	0.0e+00
WP_000567390.1|12526_14011_+|tail	phage tail family protein	tail	A0A068A242	Staphylococcus_phage	100.0	1.5e-297
WP_031788239.1|14026_17812_+	phage minor structural protein	NA	C8CH32	Staphylococcus_phage	99.2	0.0e+00
WP_001153681.1|17801_17954_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040256.1|18000_18288_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	98.9	2.9e-43
WP_000539688.1|18345_18642_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|18791_18968_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|19020_19128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|19179_19434_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861030.1|19445_20201_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	99.6	2.2e-151
WP_000920035.1|20391_20883_+	staphylokinase	NA	A7TWR8	Staphylococcus_phage	98.8	2.6e-84
WP_000702262.1|22379_22730_+	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|22782_23043_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|23353_23533_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_000591859.1|23904_24102_-	hypothetical protein	NA	A0A1P8L6A7	Staphylococcus_phage	84.6	3.0e-23
>prophage 2
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	28823	31270	2761631		Staphylococcus_phage(100.0%)	3	NA	NA
WP_031787901.1|28823_29720_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.5	1.3e-20
WP_031787900.1|29720_30377_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_031787899.1|30397_31270_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	8.0e-28
>prophage 3
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	36516	36918	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_031787895.1|36516_36918_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	44.4	6.0e-23
>prophage 4
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	41610	43644	2761631		Bacillus_virus(50.0%)	2	NA	NA
WP_000149689.1|41610_42171_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.7	2.9e-31
WP_031787892.1|42546_43644_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.7	1.1e-45
>prophage 5
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	47651	58274	2761631		Bacillus_virus(40.0%)	9	NA	NA
WP_031787889.1|47651_49121_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.8	1.8e-109
WP_031787888.1|49113_49935_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	51.9	2.8e-67
WP_000011540.1|50222_50825_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000669793.1|50805_50979_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_031787887.1|51505_52804_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.2e-16
WP_001165363.1|52911_53214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787886.1|53385_54078_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992932.1|54074_56267_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.7	1.9e-134
WP_031787885.1|56270_58274_+	NAD-dependent DNA ligase LigA	NA	A0A0A8J9A9	Ralstonia_phage	36.5	4.6e-111
>prophage 6
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	65196	71768	2761631		Streptococcus_phage(50.0%)	6	NA	NA
WP_001231453.1|65196_66138_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	28.1	1.8e-17
WP_031787882.1|66224_67586_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	45.0	3.2e-108
WP_031787881.1|67751_68282_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140169.1|68509_69580_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_001057707.1|69642_70194_-	3'-5' exonuclease	NA	M1PFD8	Streptococcus_phage	36.5	5.9e-29
WP_048657535.1|70313_71768_+	carboxylesterase family protein	NA	L7Y5U6	Megavirus	40.6	1.9e-29
>prophage 7
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	80134	80764	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_000153529.1|80134_80764_+	two-component system response regulator VraR	NA	W8CYM9	Bacillus_phage	25.6	8.9e-05
>prophage 8
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	96328	98065	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_031788210.1|96328_98065_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	29.9	7.8e-51
>prophage 9
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	114561	115284	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031787931.1|114561_115284_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.5	7.8e-37
>prophage 10
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	125639	125984	2761631		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290300.1|125639_125984_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	4.4e-06
>prophage 11
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	135096	135837	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216866.1|135096_135837_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.4	4.5e-24
>prophage 12
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	144010	162327	2761631	transposase	Staphylococcus_phage(100.0%)	16	NA	NA
WP_133169728.1|144010_144184_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	64.1	1.3e-06
WP_031787919.1|144317_145106_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	93.5	7.2e-137
WP_031787918.1|146355_147291_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	92.8	9.7e-165
WP_031787917.1|147292_148276_+	leukocidin/hemolysin toxin family protein	NA	A0A2H4PQH7	Staphylococcus_phage	87.8	1.0e-164
WP_072324115.1|148698_148842_+	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_031787916.1|149565_149709_+	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	78.7	2.0e-13
WP_031787915.1|149773_152767_+	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	90.2	0.0e+00
WP_031787914.1|152759_154004_+	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	88.9	3.4e-213
WP_031787913.1|154019_154538_+	flavoprotein	NA	A0A2H4PQG9	Staphylococcus_phage	98.8	1.0e-94
WP_031787912.1|154547_155921_+	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	94.1	1.1e-244
WP_031787911.1|155942_156632_+	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	99.6	2.0e-122
WP_031787910.1|156631_157393_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	99.6	7.5e-131
WP_072324117.1|157389_158088_+	BsaG protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	1.6e-111
WP_031787908.1|158501_159071_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	60.0	1.4e-49
WP_031896312.1|159539_161096_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	96.9	1.6e-284
WP_031788363.1|161088_162327_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	33.7	3.9e-44
>prophage 13
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	165828	215291	2761631	protease,tRNA,transposase	Staphylococcus_phage(92.11%)	47	NA	NA
WP_031787842.1|165828_166110_+|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	62.4	3.2e-23
WP_031787841.1|166531_166978_+	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_031787840.1|167162_167732_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	7.4e-75
WP_031787839.1|167861_168614_-	hypothetical protein	NA	A0A097PAT7	Streptococcus_pyogenes_phage	46.2	8.3e-50
WP_170997539.1|168640_169324_-	exotoxin	NA	A0EX09	Staphylococcus_phage	33.5	8.4e-25
WP_031787837.1|169410_170037_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	80.3	1.6e-75
WP_031787836.1|170112_171108_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	93.5	4.8e-69
WP_031787835.1|171190_171781_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	80.0	1.9e-12
WP_072324187.1|172118_172571_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	69.0	2.3e-55
WP_031787833.1|172733_174212_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	90.7	1.6e-262
WP_031787832.1|174216_175218_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	85.6	2.2e-162
WP_000718109.1|175214_175472_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	97.6	1.0e-44
WP_000672016.1|175538_176012_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	91.7	9.2e-79
WP_072324188.1|176016_176775_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	88.6	7.2e-126
WP_031787830.1|176954_178547_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.1	5.9e-312
WP_000933824.1|178917_180111_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	1.3e-217
WP_031787829.1|180235_181144_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.0	8.3e-137
WP_031787828.1|181458_182292_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	87.7	6.7e-141
WP_000626064.1|182662_183016_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	41.0	2.7e-11
WP_001199739.1|183012_183378_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	78.5	4.2e-47
WP_000091424.1|183610_183913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096490.1|184170_184884_+	transaldolase	NA	M1PR54	Cyanophage	35.3	1.9e-19
WP_000492907.1|185165_185786_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_031787827.1|185967_186603_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000038426.1|186891_187335_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	68.0	2.2e-42
WP_031787826.1|187327_187765_-	competence protein ComK	NA	NA	NA	NA	NA
WP_031787825.1|187784_188255_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	76.3	3.8e-61
WP_000384170.1|188454_188679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032829.1|188956_189814_+	glucosaminidase domain-containing protein	NA	A0A1W6JQU5	Staphylococcus_phage	41.4	2.2e-38
WP_031787824.1|190373_191666_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	85.8	1.3e-196
WP_031787823.1|191662_191980_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	78.8	3.9e-41
WP_031787822.1|192494_193991_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	93.8	1.4e-24
WP_031787821.1|194468_195512_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	87.8	2.7e-176
WP_031787820.1|195518_196151_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	88.6	1.3e-99
WP_031787819.1|196161_197343_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	91.9	2.1e-212
WP_001008547.1|197355_197817_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	97.4	2.1e-67
WP_031787818.1|197957_198959_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	94.6	1.1e-177
WP_072324120.1|199070_199211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787816.1|199191_200019_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757544.1|200621_201023_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764431.1|201131_201695_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	84.0	6.4e-87
WP_031787815.1|201691_202645_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	96.6	1.0e-76
WP_031787814.1|202752_203934_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	97.2	6.4e-214
WP_088778501.1|204221_206639_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	96.6	0.0e+00
WP_000836460.1|206660_206972_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	89.3	6.7e-46
WP_031787812.1|207303_213873_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	84.0	7.6e-272
WP_031787811.1|214019_215291_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	89.1	9.8e-51
>prophage 14
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	226417	231808	2761631		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091391.1|226417_227275_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	94.9	2.4e-69
WP_001048364.1|227303_227900_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_031787805.1|227920_231808_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	3.5e-83
>prophage 15
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	240450	242157	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_031787598.1|240450_242157_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	94.0	3.8e-260
>prophage 16
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	248792	251471	2761631	protease,tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_031787595.1|248792_250055_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.5	7.1e-86
WP_031787594.1|250196_251471_-|protease	serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	27.9	1.4e-09
>prophage 17
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	255259	259705	2761631		Staphylococcus_phage(50.0%)	4	NA	NA
WP_031787591.1|255259_256864_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	96.3	2.4e-110
WP_031787590.1|256850_258011_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_031787589.1|258435_258882_-	OsmC family protein	NA	NA	NA	NA	NA
WP_031787588.1|258961_259705_+	hypothetical protein	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	31.9	3.2e-17
>prophage 18
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	278121	281319	2761631		Streptomyces_phage(100.0%)	1	NA	NA
WP_031787581.1|278121_281319_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.8	1.9e-135
>prophage 19
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	286269	288027	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232659.1|286269_288027_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	98.9	1.3e-40
>prophage 20
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	292868	301028	2761631		Alteromonas_phage(25.0%)	5	NA	NA
WP_000080027.1|292868_293570_+	response regulator transcription factor	NA	A0A1J0GWE0	Alteromonas_phage	22.0	4.8e-07
WP_072292063.1|293572_295234_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	38.4	1.9e-33
WP_031787577.1|295763_297251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048657647.1|297509_300140_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.3	8.0e-47
WP_001114448.1|300155_301028_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	36.3	3.7e-41
>prophage 21
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	304942	316104	2761631	protease,tRNA	Brevibacillus_phage(20.0%)	11	NA	NA
WP_031787572.1|304942_305863_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	2.4e-30
WP_031787570.1|306279_308217_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	2.7e-116
WP_031787569.1|308644_310138_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|310367_310895_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|310923_311124_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|311170_311527_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032667.1|311670_312279_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.5	1.7e-21
WP_001280029.1|312297_313227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787568.1|313231_313342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127584.1|313389_314691_+	trigger factor	NA	NA	NA	NA	NA
WP_000472295.1|314841_316104_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	61.3	6.6e-140
>prophage 22
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	325576	328207	2761631	tRNA	Catovirus(100.0%)	1	NA	NA
WP_031787561.1|325576_328207_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.9	1.7e-153
>prophage 23
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	338388	373766	2761631	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_031787300.1|338388_339393_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.9	5.8e-06
WP_001019183.1|339394_340420_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112044.1|340442_341582_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.0	1.9e-85
WP_001160681.1|341600_341861_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	6.3e-05
WP_031787299.1|342136_344416_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	4.1e-31
WP_000595019.1|344619_346893_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	7.3e-65
WP_000364420.1|346914_347433_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_155270620.1|347714_347864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058598.1|347853_350043_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869985.1|350054_350507_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717813.1|350503_351379_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.1	2.8e-12
WP_031787298.1|351823_353086_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_031787297.1|353101_354868_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.7	1.3e-16
WP_000682641.1|355327_356101_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102733.1|356263_357538_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	9.0e-105
WP_000704122.1|357622_358045_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752908.1|358146_358329_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009234.1|358365_358506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000178132.1|358773_359775_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409154.1|360088_361231_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	1.2e-31
WP_000066108.1|361231_362350_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_031787296.1|362808_363477_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_031787295.1|363478_365968_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	4.1e-69
WP_031787294.1|366309_368940_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.9	7.9e-63
WP_000426912.1|369002_369263_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939064.1|369266_369695_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|369709_370018_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_031787293.1|370298_370937_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	26.6	5.5e-10
WP_031787292.1|370939_371863_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848308.1|371874_373143_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	5.2e-36
WP_000648618.1|373142_373766_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.6	7.4e-36
>prophage 24
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	389071	395240	2761631		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|389071_389533_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_031787280.1|389537_391739_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	31.7	3.5e-32
WP_001282558.1|391795_392770_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|392819_393071_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000356945.1|393416_395240_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	24.7	1.0e-21
>prophage 25
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	398373	401485	2761631		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034709.1|398373_400206_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.4	2.2e-136
WP_031787277.1|400345_401485_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.1	1.2e-26
>prophage 26
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	408014	408962	2761631		Erwinia_phage(100.0%)	1	NA	NA
WP_001117772.1|408014_408962_+	PhoH family protein	NA	W8D063	Erwinia_phage	48.5	5.8e-48
>prophage 27
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	411998	425725	2761631	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_001030083.1|411998_413390_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	3.6e-46
WP_072292024.1|413724_414348_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000427723.1|414358_415177_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_031787270.1|415237_417037_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.6	4.2e-55
WP_001283055.1|417258_418365_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624530.1|418492_419170_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_031787269.1|419172_420273_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_031787268.1|420386_421733_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.5	1.4e-55
WP_031787267.1|421742_422633_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.5	1.5e-26
WP_031787266.1|422758_423544_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.9	1.8e-18
WP_000564321.1|423584_424448_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095262.1|424434_424845_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863553.1|425125_425725_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	55.2	2.4e-60
>prophage 28
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	431900	432524	2761631		Streptococcus_phage(100.0%)	1	NA	NA
WP_031787263.1|431900_432524_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	40.1	2.2e-32
>prophage 29
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	438068	440880	2761631		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_031787255.1|438068_439415_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.6	5.7e-65
WP_031787254.1|439407_440880_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.5	2.1e-81
>prophage 30
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	448280	454834	2761631		Klosneuvirus(33.33%)	6	NA	NA
WP_031787249.1|448280_449618_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SIT1	Klosneuvirus	34.4	3.9e-42
WP_000159864.1|449610_449841_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_031787248.1|449818_450700_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.7	4.9e-09
WP_001124985.1|451112_451565_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_031787247.1|451580_453257_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_031787246.1|453412_454834_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.0	2.1e-41
>prophage 31
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	461571	462978	2761631		Synechococcus_phage(100.0%)	1	NA	NA
WP_031787241.1|461571_462978_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	9.5e-31
>prophage 32
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	467909	469394	2761631		Cyanophage(100.0%)	1	NA	NA
WP_031787238.1|467909_469394_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.6	1.5e-79
>prophage 33
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	475018	481165	2761631		Brevibacillus_phage(25.0%)	7	NA	NA
WP_031787233.1|475018_475906_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	3.6e-36
WP_031787232.1|475968_476487_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273377.1|476578_477310_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.5	7.9e-05
WP_000368645.1|477302_477845_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_031787231.1|477837_478575_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064075.1|478707_479433_+	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	6.0e-45
WP_000987780.1|479413_481165_+	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	32.7	1.3e-21
>prophage 34
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	489134	491813	2761631		Bacillus_phage(50.0%)	3	NA	NA
WP_001151999.1|489134_489383_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	6.4e-15
WP_031787073.1|489490_490444_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_154893099.1|490433_491813_+	RecQ family ATP-dependent DNA helicase	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.9	3.3e-60
>prophage 35
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	501313	506780	2761631		Bacillus_phage(20.0%)	7	NA	NA
WP_001043863.1|501313_501586_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_031787067.1|502015_502588_+	heptaprenyl pyrophosphate synthase subunit A	NA	NA	NA	NA	NA
WP_031787066.1|502590_503316_+	demethylmenaquinone methyltransferase	NA	A0A097BYE1	Leuconostoc_phage	27.3	9.3e-06
WP_001096467.1|503317_504277_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.2	3.3e-11
WP_000442480.1|504368_504818_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789518.1|505026_505227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787065.1|505613_506780_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	3.4e-34
>prophage 36
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	514762	522244	2761631	tRNA	Bacillus_virus(25.0%)	5	NA	NA
WP_031787060.1|514762_515965_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	27.6	2.6e-29
WP_031787059.1|515951_516923_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_031787058.1|516946_519640_+	ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	33.7	6.9e-46
WP_031787057.1|519971_521264_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	8.7e-55
WP_031787056.1|521557_522244_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	33.7	2.5e-08
>prophage 37
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	525706	526384	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_072292017.1|525706_526384_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	2.4e-24
>prophage 38
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	535562	536441	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_031787047.1|535562_536441_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.1	5.2e-19
>prophage 39
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	574718	584096	2761631		Staphylococcus_phage(60.0%)	12	NA	NA
WP_031787041.1|574718_575423_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.3	2.5e-11
WP_000086838.1|575667_575862_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_001165813.1|575873_576125_+	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000995278.1|577303_577741_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_031787040.1|578160_579117_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.5	4.0e-166
WP_000175753.1|579315_579795_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.2	2.9e-72
WP_031787039.1|579808_580648_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	79.5	1.7e-51
WP_031787038.1|580733_581267_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913320.1|581259_581688_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_031787037.1|581699_582200_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801009.1|582199_582421_+	YozE family protein	NA	NA	NA	NA	NA
WP_000342169.1|582605_584096_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	27.6	1.0e-19
>prophage 40
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	587691	589703	2761631		Bacillus_phage(50.0%)	2	NA	NA
WP_000192133.1|587691_588351_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	3.0e-35
WP_154893109.1|588347_589703_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.6	6.0e-14
>prophage 41
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	595453	596245	2761631		Halovirus(100.0%)	1	NA	NA
WP_031787032.1|595453_596245_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	4.3e-12
>prophage 42
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	599774	604712	2761631	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_031787030.1|599774_600911_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	29.6	1.4e-32
WP_072324147.1|600942_601572_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_001216645.1|601590_601860_-	acylphosphatase	NA	NA	NA	NA	NA
WP_031787028.1|602021_602330_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|602500_602701_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876198.1|602897_603299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154893111.1|603446_604712_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.8	6.8e-12
>prophage 43
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	612304	613906	2761631		Klosneuvirus(100.0%)	1	NA	NA
WP_000942304.1|612304_613906_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	7.2e-51
>prophage 44
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	618311	625909	2761631		Indivirus(25.0%)	8	NA	NA
WP_031787017.1|618311_619163_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.5e-15
WP_000974852.1|619169_619811_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_031787016.1|619948_621763_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.2	1.6e-150
WP_000171801.1|621969_622314_+	membrane protein	NA	NA	NA	NA	NA
WP_031787015.1|622645_623632_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_031787014.1|623624_624455_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000052307.1|624441_625215_+	ABC transporter ATP-binding protein	NA	A0A2H4UUX5	Bodo_saltans_virus	26.2	6.4e-05
WP_031787013.1|625207_625909_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	4.0e-14
>prophage 45
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	633368	635723	2761631		Acinetobacter_phage(100.0%)	3	NA	NA
WP_047451272.1|633368_634151_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	37.0	2.7e-27
WP_031787005.1|634152_635151_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.5	6.5e-34
WP_031787004.1|635153_635723_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.3	3.9e-23
>prophage 46
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	640048	641311	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_000283038.1|640048_641311_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.8	1.5e-96
>prophage 47
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	651044	655438	2761631		Bacillus_phage(50.0%)	2	NA	NA
WP_000005557.1|651044_653447_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.2	2.7e-94
WP_031786998.1|653446_655438_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.8	1.0e-115
>prophage 48
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	661308	662955	2761631		Vibrio_phage(100.0%)	1	NA	NA
WP_001088975.1|661308_662955_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.2	5.5e-22
>prophage 49
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	666616	667738	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691280.1|666616_667738_-	exonuclease SbcCD subunit D	NA	Q4Z9B9	Staphylococcus_phage	27.0	6.7e-11
>prophage 50
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	671909	677532	2761631		Phage_Wrath(25.0%)	6	NA	NA
WP_001208758.1|671909_672533_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	3.5e-17
WP_169929177.1|672871_673888_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	42.7	5.1e-18
WP_031786988.1|673909_674887_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	95.4	1.1e-179
WP_001085655.1|675044_675314_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|675774_675924_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000077642.1|676014_677532_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.5	6.8e-91
>prophage 51
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	687761	692031	2761631		Bacillus_phage(50.0%)	6	NA	NA
WP_031786982.1|687761_688295_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	42.7	5.8e-21
WP_001027141.1|688435_688624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031786981.1|688728_689331_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_031786980.1|689327_690419_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_031786979.1|690422_691154_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_072324148.1|691128_692031_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.8	5.7e-21
>prophage 52
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	696859	703020	2761631	capsid	Staphylococcus_phage(100.0%)	7	NA	NA
WP_063665517.1|696859_698212_-|capsid	minor capsid protein	capsid	A0A1J0MFV1	Staphylococcus_phage	55.9	5.7e-142
WP_031786971.1|699046_699463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031786970.1|699974_700160_-	XRE family transcriptional regulator	NA	A0A0F6N3H3	Staphylococcus_phage	77.0	5.4e-19
WP_031786969.1|700588_700699_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002337.1|701404_701611_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	56.7	3.8e-13
WP_076681704.1|701905_702130_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	73.9	1.0e-19
WP_031786967.1|702822_703020_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	3.7e-10
>prophage 53
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	708092	708569	2761631		Turkeypox_virus(100.0%)	1	NA	NA
WP_031786965.1|708092_708569_+	glutathione peroxidase	NA	A0A0M5HSM9	Turkeypox_virus	36.2	1.6e-14
>prophage 54
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	714524	721020	2761631		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103746.1|714524_715343_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	5.4e-26
WP_031786963.1|715852_716395_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_031786962.1|716400_718407_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.3	1.8e-59
WP_031786961.1|718419_721020_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.4	3.1e-43
>prophage 55
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	730596	731640	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_000368169.1|730596_731640_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 56
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	735863	741535	2761631		Bacillus_virus(33.33%)	4	NA	NA
WP_031786955.1|735863_737150_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	26.1	3.9e-15
WP_031786954.1|737149_738415_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	27.0	7.7e-40
WP_001293301.1|738445_739159_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_031786953.1|739162_741535_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	3.3e-84
>prophage 57
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	746569	758323	2761631	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_031786952.1|746569_747541_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	2.3e-07
WP_000282309.1|747555_748473_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097321.1|748644_748995_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043647.1|749323_751450_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.0	4.1e-25
WP_000021269.1|751454_751772_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_031786951.1|751768_752053_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097470.1|752073_753249_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_031786950.1|753269_753737_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_078097697.1|754012_758323_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 58
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	762605	763376	2761631		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473698.1|762605_763376_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	40.0	1.4e-23
>prophage 59
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	768073	779346	2761631	protease,tRNA	Erwinia_phage(20.0%)	9	NA	NA
WP_000381629.1|768073_769477_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	1.7e-27
WP_000072683.1|769541_770087_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_031786945.1|770083_770980_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	32.9	3.2e-32
WP_000195261.1|771394_772702_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_072324151.1|772857_774933_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	38.9	8.6e-105
WP_031786943.1|775106_775979_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000110253.1|776373_777282_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020805.1|777303_778470_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_031786942.1|778578_779346_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	43.6	3.8e-26
>prophage 60
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	792604	794889	2761631		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043235.1|792604_793336_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.4	5.9e-24
WP_000426914.1|793451_793685_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167268.1|794154_794889_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 61
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	805357	807352	2761631		Moumouvirus(100.0%)	1	NA	NA
WP_154893115.1|805357_807352_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	1.9e-24
>prophage 62
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	810499	811435	2761631	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161302.1|810499_811435_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	30.8	1.6e-10
>prophage 63
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	816455	818710	2761631		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_031787792.1|816455_817655_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.3	7.8e-42
WP_031787791.1|817868_818087_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368229.1|818086_818710_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	4.7e-22
>prophage 64
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	821956	822568	2761631		Pandoravirus(100.0%)	1	NA	NA
WP_001040243.1|821956_822568_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	6.2e-27
>prophage 65
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	826535	831144	2761631		Halovirus(33.33%)	4	NA	NA
WP_001190919.1|826535_827636_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	37.5	8.7e-64
WP_000767036.1|827637_828912_-	dihydroorotase	NA	NA	NA	NA	NA
WP_031787787.1|828925_829810_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.6	5.1e-30
WP_031787786.1|829836_831144_-	hypothetical protein	NA	Q9KX94	Enterobacteria_phage	34.3	1.1e-54
>prophage 66
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	835098	837849	2761631	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_031787783.1|835098_837849_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	27.6	5.2e-89
>prophage 67
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	866281	870829	2761631		Staphylococcus_phage(66.67%)	5	NA	NA
WP_031787761.1|866281_866482_-	hypothetical protein	NA	Q4ZBW5	Staphylococcus_virus	68.2	7.6e-19
WP_031787759.1|867469_868429_+	leukocidin/hemolysin toxin family protein	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	3.9e-36
WP_031787758.1|868871_869105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031788268.1|870053_870239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031788267.1|870478_870829_-	complement inhibitor SCIN family protein	NA	A7TWS0	Staphylococcus_phage	55.4	5.3e-23
>prophage 68
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	882290	886848	2761631		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|882290_882605_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_031788264.1|882777_885126_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	24.6	2.1e-14
WP_031788263.1|885135_886848_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	23.1	2.3e-15
>prophage 69
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	892077	893136	2761631	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003564.1|892077_893136_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	2.5e-31
>prophage 70
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	905079	907990	2761631		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|905079_905562_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263804.1|905563_906106_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814562.1|906175_906565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049153.1|906567_906822_-	DUF2129 domain-containing protein	NA	NA	NA	NA	NA
WP_000757536.1|907063_907990_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	1.5e-11
>prophage 71
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	919955	921803	2761631		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|919955_921803_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 72
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	929979	938822	2761631		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433557.1|929979_931074_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	43.0	4.1e-37
WP_001020620.1|931085_931625_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_031787736.1|931769_932042_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|932216_933623_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_154893117.1|933626_934919_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068177.1|935007_935985_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035327.1|935988_937101_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	29.8	6.4e-06
WP_000668345.1|937269_937902_-	YkyA family protein	NA	NA	NA	NA	NA
WP_000957035.1|938270_938822_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	5.4e-14
>prophage 73
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	947977	949150	2761631		Streptococcus_phage(100.0%)	1	NA	NA
WP_000762014.1|947977_949150_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	2.4e-75
>prophage 74
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	952330	967035	2761631		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_031787731.1|952330_953731_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.5	2.3e-13
WP_031787730.1|953723_954530_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_031787729.1|954751_955990_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_031787728.1|956012_957491_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	1.7e-78
WP_031787727.1|957505_958072_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	1.6e-29
WP_031787726.1|958074_959103_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.9	8.1e-64
WP_031787725.1|959095_960580_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.3	1.4e-43
WP_031787724.1|960558_962748_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.1	5.5e-142
WP_000666811.1|962740_963412_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848349.1|963413_963674_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_031787723.1|963673_964378_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	4.7e-47
WP_031787722.1|964381_965506_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861575.1|965492_965975_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	3.7e-19
WP_000225839.1|966174_967035_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.4	3.4e-39
>prophage 75
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	976978	980764	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_031787368.1|976978_980764_+	glucosaminidase domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	47.4	8.8e-55
>prophage 76
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	985218	986280	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_047451233.1|985218_986280_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	31.4	2.9e-16
>prophage 77
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	995064	995277	2761631		Enterococcus_phage(100.0%)	1	NA	NA
WP_000867361.1|995064_995277_+	NINE protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.9e-07
>prophage 78
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1000099	1000741	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031787357.1|1000099_1000741_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.2	5.9e-20
>prophage 79
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1010925	1016139	2761631		Pithovirus(33.33%)	3	NA	NA
WP_072324156.1|1010925_1013247_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	26.8	1.4e-10
WP_000480656.1|1013464_1014268_-	TerC family protein	NA	S5MAL1	Bacillus_phage	39.5	7.8e-30
WP_031787349.1|1014576_1016139_-	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	28.6	1.1e-35
>prophage 80
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1035196	1037005	2761631		Streptococcus_phage(100.0%)	1	NA	NA
WP_031787338.1|1035196_1037005_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	25.2	4.2e-47
>prophage 81
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1042700	1044669	2761631		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_031787332.1|1042700_1043597_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.1e-07
WP_031787331.1|1043586_1044669_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.4	2.1e-17
>prophage 82
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1049409	1050492	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031787326.1|1049409_1050492_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	9.9e-20
>prophage 83
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1058384	1063015	2761631		Agrobacterium_phage(50.0%)	2	NA	NA
WP_031787318.1|1058384_1060994_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.2	9.5e-117
WP_031787317.1|1061200_1063015_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.4	1.6e-33
>prophage 84
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1068199	1071853	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_031787313.1|1068199_1071853_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	23.6	2.5e-22
>prophage 85
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1082159	1089102	2761631		Staphylococcus_phage(33.33%)	6	NA	NA
WP_031787307.1|1082159_1083089_+	glycerophosphodiester phosphodiesterase	NA	A0A220BY94	Staphylococcus_phage	37.3	8.2e-39
WP_000138487.1|1083415_1084660_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_031787306.1|1084768_1085959_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	30.2	4.6e-34
WP_031787305.1|1086266_1087394_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067295.1|1087747_1088125_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000186341.1|1088508_1089102_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.5e-25
>prophage 86
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1099138	1102335	2761631	transposase	Mycoplasma_phage(50.0%)	2	NA	NA
WP_154893119.1|1099138_1100614_-	leucyl aminopeptidase family protein	NA	Q6GYZ8	Mycoplasma_phage	35.0	9.6e-50
WP_047451214.1|1100643_1102335_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	77.9	1.5e-240
>prophage 87
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1105711	1106071	2761631		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_031788334.1|1105711_1106071_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	40.6	5.4e-15
>prophage 88
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1110140	1112809	2761631		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613536.1|1110140_1111355_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	28.7	4.1e-22
WP_031788124.1|1111351_1112809_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.6	2.9e-38
>prophage 89
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1126233	1129744	2761631		environmental_halophage(50.0%)	3	NA	NA
WP_072324168.1|1126233_1127484_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.0	4.1e-110
WP_031788114.1|1127576_1128884_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1128982_1129744_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 90
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1133153	1142122	2761631		Streptococcus_phage(40.0%)	13	NA	NA
WP_031788110.1|1133153_1134179_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	7.2e-28
WP_031788109.1|1134429_1134726_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001018958.1|1134718_1135105_-	topiosmerase	NA	NA	NA	NA	NA
WP_154893121.1|1135333_1136212_-	DUF1963 domain-containing protein	NA	NA	NA	NA	NA
WP_000290488.1|1136389_1136770_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_126495130.1|1136927_1137284_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	47.6	4.7e-19
WP_001147950.1|1137426_1137747_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	32.6	8.3e-07
WP_031788106.1|1137883_1138423_-	nitroreductase	NA	NA	NA	NA	NA
WP_047451209.1|1138504_1139224_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	31.6	1.5e-16
WP_001007646.1|1139372_1139795_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000695603.1|1140201_1140693_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_031788104.1|1140856_1141474_+	LysE family transporter	NA	NA	NA	NA	NA
WP_031788103.1|1141540_1142122_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	42.9	3.8e-34
>prophage 91
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1145846	1147079	2761631		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1145846_1146047_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_031788100.1|1146410_1147079_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	51.5	9.1e-32
>prophage 92
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1157298	1158027	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_031788248.1|1157298_1158027_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.4e-17
>prophage 93
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1161444	1183347	2761631	terminase,integrase,coat	Staphylococcus_phage(60.0%)	27	1166128:1166142	1177710:1177724
WP_000746595.1|1161444_1162167_+	staphylococcal enterotoxin type L	NA	A0A1X9H080	Staphylococcus_phage	34.9	2.1e-26
WP_000278088.1|1162333_1163134_-	staphylococcal enterotoxin type C3	NA	A0A097PAT7	Streptococcus_pyogenes_phage	47.5	6.1e-51
WP_001035616.1|1163921_1164482_+	DUF4888 domain-containing protein	NA	Q4ZBG8	Staphylococcus_virus	68.1	5.4e-62
WP_001035599.1|1165358_1166063_+	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA	NA
1166128:1166142	attL	CTTTTATCTTTATAA	NA	NA	NA	NA
WP_001293088.1|1166217_1166787_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.4	7.9e-101
WP_000358778.1|1166783_1167125_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	100.0	1.7e-58
WP_031875775.1|1167127_1167655_-|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	96.0	5.4e-88
WP_000448775.1|1167705_1167924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000846282.1|1167941_1168520_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
WP_001190612.1|1168531_1168873_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	98.2	2.4e-57
WP_054194595.1|1169322_1169964_-	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	94.8	4.5e-113
WP_000998182.1|1169960_1170245_-	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	92.6	1.0e-45
WP_001039168.1|1170246_1170609_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
WP_001806665.1|1170894_1172364_-	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	99.4	7.6e-289
WP_001002687.1|1172380_1173250_-	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	96.5	9.3e-162
WP_001103953.1|1173336_1173630_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	61.8	8.9e-24
WP_000850930.1|1173630_1174041_-	hypothetical protein	NA	A0A2H4JBF1	uncultured_Caudovirales_phage	85.8	2.4e-59
WP_000800860.1|1174042_1174180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000163542.1|1174192_1174411_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000272128.1|1174598_1175528_+	helix-turn-helix transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	35.6	2.2e-12
WP_025174292.1|1175517_1176627_+|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	44.6	1.2e-76
WP_001085185.1|1177189_1177654_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
WP_031788245.1|1177675_1180048_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.9	3.5e-94
1177710:1177724	attR	CTTTTATCTTTATAA	NA	NA	NA	NA
WP_001165963.1|1180081_1180822_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1180937_1181171_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000763764.1|1181237_1181696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121757.1|1182042_1183347_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	5.1e-196
>prophage 94
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1194010	1199404	2761631		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1194010_1194598_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006553.1|1195162_1196107_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	5.4e-54
WP_031787680.1|1196218_1197214_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	39.4	4.5e-51
WP_031787679.1|1197210_1198122_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000141138.1|1198468_1199404_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	48.9	1.4e-83
>prophage 95
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1203563	1206410	2761631		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_031787676.1|1203563_1206410_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.5	0.0e+00
>prophage 96
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1209721	1210549	2761631		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_031787675.1|1209721_1210549_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	41.3	1.3e-11
>prophage 97
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1216626	1222280	2761631		Streptococcus_phage(66.67%)	5	NA	NA
WP_170997534.1|1216626_1217748_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5S6	Streptococcus_phage	35.4	9.9e-47
WP_031787671.1|1218072_1218939_-	DegV family protein	NA	NA	NA	NA	NA
WP_031787670.1|1219082_1219724_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	43.9	6.9e-37
WP_000258144.1|1219836_1220892_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460981.1|1221209_1222280_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.7e-16
>prophage 98
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1231423	1254666	2761631		uncultured_Caudovirales_phage(35.71%)	17	NA	NA
WP_000616904.1|1231423_1232185_-	ATP-binding cassette domain-containing protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	2.7e-16
WP_031787666.1|1232181_1233138_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	62.2	1.7e-07
WP_000876315.1|1233124_1234096_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	79.6	3.9e-140
WP_000562498.1|1234431_1235403_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855501.1|1235519_1237625_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
WP_000692520.1|1237587_1237986_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	73.5	1.1e-53
WP_001068500.1|1238792_1239662_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000046961.1|1239681_1240182_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	1.0e-51
WP_031787665.1|1240520_1242026_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.0	3.4e-58
WP_031787664.1|1242615_1243530_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	23.4	2.5e-08
WP_031787663.1|1243911_1244454_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_031787662.1|1244798_1245857_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.3	5.1e-21
WP_031787661.1|1246097_1247612_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589253.1|1247604_1248582_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	3.2e-25
WP_072324171.1|1248803_1250585_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	1.7e-77
WP_072324172.1|1250595_1252479_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.6e-55
WP_000098278.1|1252725_1254666_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.3	1.7e-110
>prophage 99
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1257818	1267654	2761631		Pandoravirus(12.5%)	12	NA	NA
WP_031787655.1|1257818_1258970_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	38.9	1.7e-22
WP_031787654.1|1258953_1259547_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	39.8	6.4e-37
WP_000446720.1|1259901_1260570_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	2.8e-65
WP_031787653.1|1260571_1260991_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	26.9	6.3e-07
WP_031787652.1|1260994_1261708_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.9	2.9e-52
WP_000637681.1|1261806_1262391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093556.1|1262646_1263087_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037800.1|1263438_1263912_+	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_000149346.1|1263886_1264573_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244419.1|1264572_1265628_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.4	3.2e-15
WP_000702771.1|1265694_1266684_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	44.2	3.9e-63
WP_031787650.1|1266814_1267654_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.2	4.2e-50
>prophage 100
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1279502	1292142	2761631		Indivirus(40.0%)	12	NA	NA
WP_031787494.1|1279502_1280876_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.8	1.5e-44
WP_031787493.1|1280963_1282517_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
WP_031787492.1|1282802_1283090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031787491.1|1283122_1284031_-	aldo/keto reductase family oxidoreductase	NA	A0A1V0SDE7	Indivirus	22.6	3.1e-06
WP_031787490.1|1284130_1285069_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_001283444.1|1285295_1285739_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_031787489.1|1285867_1287544_-	amino acid ABC transporter ATP-binding/permease protein	NA	A0A1V0SE00	Indivirus	32.5	6.5e-18
WP_031787488.1|1287540_1289172_-	ABC transporter ATP-binding protein/permease	NA	A0A285PWH2	Cedratvirus	28.3	2.8e-10
WP_031787487.1|1289390_1290266_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_031787486.1|1290430_1291114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000181746.1|1291116_1291575_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_031787485.1|1291575_1292142_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	38.1	2.5e-22
>prophage 101
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1299503	1299983	2761631		Pandoravirus(100.0%)	1	NA	NA
WP_031787480.1|1299503_1299983_-	cupin domain-containing protein	NA	A0A291ATU0	Pandoravirus	38.5	9.5e-15
>prophage 102
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1305256	1306054	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_000731649.1|1305256_1306054_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	3.5e-06
>prophage 103
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1310859	1311621	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985995.1|1310859_1311621_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	3.6e-32
>prophage 104
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1315982	1317026	2761631		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_001078079.1|1315982_1317026_-	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	25.6	1.3e-16
>prophage 105
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1323591	1324389	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_000088638.1|1323591_1324389_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.9	3.1e-18
>prophage 106
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1327633	1332026	2761631		Bacillus_phage(50.0%)	3	NA	NA
WP_031787473.1|1327633_1329361_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.5	8.8e-111
WP_031787472.1|1330248_1331544_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_000832260.1|1331627_1332026_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 107
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1338956	1339700	2761631		Indivirus(100.0%)	1	NA	NA
WP_000894468.1|1338956_1339700_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	30.1	3.1e-12
>prophage 108
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1353512	1354073	2761631	integrase	Streptococcus_phage(100.0%)	1	1344513:1344527	1356800:1356814
1344513:1344527	attL	GAAAATTCCTTTTTA	NA	NA	NA	NA
WP_031787462.1|1353512_1354073_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	36.3	8.7e-20
WP_031787462.1|1353512_1354073_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	36.3	8.7e-20
1356800:1356814	attR	TAAAAAGGAATTTTC	NA	NA	NA	NA
>prophage 109
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1357383	1358172	2761631		Mycobacterium_phage(100.0%)	1	NA	NA
WP_001045431.1|1357383_1358172_-	alpha/beta hydrolase	NA	A0A0B5A484	Mycobacterium_phage	33.7	8.6e-05
>prophage 110
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1367120	1370475	2761631		Tupanvirus(50.0%)	3	NA	NA
WP_001200748.1|1367120_1368131_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001788287.1|1368630_1369152_-	YwhD family protein	NA	NA	NA	NA	NA
WP_031787456.1|1369179_1370475_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 111
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1386848	1388171	2761631		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_031788164.1|1386848_1388171_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.1	1.4e-108
>prophage 112
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1399436	1400093	2761631		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455263.1|1399436_1400093_-	uracil-DNA glycosylase	NA	A0A075CXP7	Elephant_endotheliotropic_herpesvirus	46.2	1.6e-44
>prophage 113
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1405619	1407020	2761631		Burkholderia_virus(100.0%)	1	NA	NA
WP_000347077.1|1405619_1407020_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.6	1.6e-54
>prophage 114
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1431299	1431962	2761631		Enterococcus_phage(100.0%)	1	NA	NA
WP_031787950.1|1431299_1431962_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	35.1	9.0e-24
>prophage 115
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1438558	1453679	2761631		Emiliania_huxleyi_virus(25.0%)	9	NA	NA
WP_031787944.1|1438558_1439746_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.9	2.0e-45
WP_031787943.1|1439916_1441089_+	amidohydrolase	NA	NA	NA	NA	NA
WP_001040566.1|1441319_1442504_-	elongation factor Tu	NA	NA	NA	NA	NA
WP_000090313.1|1442722_1444804_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	3.6e-66
WP_001137495.1|1444926_1445397_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1445462_1445876_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031894.1|1445974_1446229_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_078097705.1|1446365_1449962_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	7.3e-67
WP_031787941.1|1450127_1453679_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	1.6e-50
>prophage 116
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1457376	1462160	2761631	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288299.1|1457376_1457925_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	5.0e-12
WP_001074473.1|1457937_1458120_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_014373786.1|1458175_1458319_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_031787939.1|1458434_1459004_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664733.1|1459084_1459609_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390335.1|1459608_1460355_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_031787938.1|1460362_1460767_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_031787937.1|1460759_1462160_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.6	4.0e-53
>prophage 117
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1468090	1470547	2761631	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897144.1|1468090_1470547_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.0	5.2e-133
>prophage 118
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1489654	1498647	2761631	tRNA	Tupanvirus(20.0%)	8	NA	NA
WP_031788098.1|1489654_1491142_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	42.8	1.9e-93
WP_000613713.1|1491653_1492133_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_000389574.1|1492129_1492495_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_031788097.1|1492472_1493276_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	28.4	2.1e-19
WP_047451655.1|1493521_1494454_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	8.3e-108
WP_031788096.1|1494632_1495514_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_031788095.1|1495755_1497849_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551279.1|1498107_1498647_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	30.4	1.0e-12
>prophage 119
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1509201	1511670	2761631		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1509201_1510167_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252513.1|1510317_1511670_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.8	2.9e-24
>prophage 120
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1517739	1525373	2761631	tRNA	Streptococcus_phage(50.0%)	9	NA	NA
WP_001051125.1|1517739_1519713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	32.3	4.2e-93
WP_031788088.1|1519996_1520836_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	4.2e-58
WP_000377062.1|1520837_1521086_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_031788087.1|1521078_1521804_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_031788086.1|1522087_1522435_-	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_001134202.1|1522451_1523255_-	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_031788085.1|1523255_1524182_-	hypothetical protein	NA	D9ZNI9	Clostridium_phage	27.6	5.2e-09
WP_000781981.1|1524398_1524728_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_001272121.1|1524755_1525373_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 121
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1534382	1536080	2761631		Streptococcus_virus(100.0%)	1	NA	NA
WP_031788040.1|1534382_1536080_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	40.9	5.1e-55
>prophage 122
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1552696	1558975	2761631		Lactobacillus_phage(33.33%)	6	NA	NA
WP_031788030.1|1552696_1553704_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.5	1.1e-25
WP_031788029.1|1554036_1554879_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000468000.1|1554919_1555579_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_031788028.1|1555582_1556608_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	9.1e-31
WP_001036656.1|1556934_1558077_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_031788027.1|1558060_1558975_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	40.3	1.2e-50
>prophage 123
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1585405	1588181	2761631		Staphylococcus_phage(100.0%)	2	NA	NA
WP_031896302.1|1585405_1586632_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	36.0	1.7e-44
WP_031787439.1|1586624_1588181_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	96.1	7.8e-284
>prophage 124
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1599322	1605291	2761631		Staphylococcus_phage(33.33%)	6	NA	NA
WP_154893128.1|1599322_1599655_-	hypothetical protein	NA	A0A0N9SJ02	Staphylococcus_phage	54.8	3.7e-10
WP_031787426.1|1600199_1600457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787425.1|1600581_1601061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000888762.1|1601082_1601475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000366938.1|1602258_1603800_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1603824_1605291_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 125
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1614107	1615631	2761631		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930491.1|1614107_1615631_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.9	6.4e-41
>prophage 126
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1625044	1631367	2761631		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1625044_1625548_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261459.1|1625568_1625865_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_031787414.1|1626108_1626300_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	76.7	2.4e-22
WP_001218728.1|1626385_1627483_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157345.1|1627494_1627698_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373078.1|1627727_1628609_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_014373770.1|1628754_1629600_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	31.0	1.3e-11
WP_031787413.1|1630263_1631367_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	26.2	4.0e-08
>prophage 127
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1641312	1642155	2761631		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_031787407.1|1641312_1642155_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.4	3.8e-11
>prophage 128
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1661949	1666009	2761631		Western_grey_kangaroopox_virus(33.33%)	4	NA	NA
WP_031787389.1|1661949_1662975_-	aldehyde reductase	NA	A0A2C9DSV6	Western_grey_kangaroopox_virus	25.2	5.0e-05
WP_031787388.1|1663290_1664313_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	24.7	3.0e-10
WP_170997533.1|1664325_1665219_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_031787386.1|1665205_1666009_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	42.9	5.2e-42
>prophage 129
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1684349	1685027	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031787375.1|1684349_1685027_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.4	4.1e-32
>prophage 130
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1705412	1709861	2761631		Mycobacterium_phage(100.0%)	1	NA	NA
WP_031788198.1|1705412_1709861_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	23.7	1.7e-28
>prophage 131
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1721825	1724799	2761631		Anomala_cuprea_entomopoxvirus(33.33%)	3	NA	NA
WP_031788189.1|1721825_1722485_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	34.5	2.6e-23
WP_031788188.1|1722540_1723503_-	peptidoglycan DD-metalloendopeptidase family protein	NA	V5R8R0	Arthrobacter_phage	42.7	1.6e-16
WP_031788187.1|1723806_1724799_-	linear amide C-N hydrolase	NA	M1HS66	Paramecium_bursaria_Chlorella_virus	27.4	5.9e-27
>prophage 132
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1732649	1734107	2761631		Pandoravirus(100.0%)	1	NA	NA
WP_031788327.1|1732649_1734107_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	26.1	7.6e-31
>prophage 133
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1737861	1741686	2761631		Enterobacteria_phage(50.0%)	2	NA	NA
WP_031788324.1|1737861_1739616_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.5	2.2e-61
WP_031788323.1|1739961_1741686_-	poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 134
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1750993	1752037	2761631		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_031788142.1|1750993_1752037_-	galactitol-1-phosphate 5-dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	28.8	6.4e-16
>prophage 135
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1759157	1760687	2761631		Vibrio_phage(100.0%)	1	NA	NA
WP_031788136.1|1759157_1760687_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	49.3	1.0e-09
>prophage 136
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1770533	1772042	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_031788130.1|1770533_1772042_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.1	8.6e-38
>prophage 137
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1782967	1788328	2761631		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894657.1|1782967_1785217_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	44.9	3.7e-186
WP_031788226.1|1785806_1786775_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127974.1|1786771_1788328_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	26.2	5.3e-14
>prophage 138
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1798397	1800445	2761631		Planktothrix_phage(50.0%)	2	NA	NA
WP_031788221.1|1798397_1799495_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_031788220.1|1799866_1800445_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	43.8	3.3e-14
>prophage 139
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1808995	1810585	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031788002.1|1808995_1810585_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.2	8.3e-23
>prophage 140
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1827778	1828963	2761631		Klosneuvirus(100.0%)	1	NA	NA
WP_031787992.1|1827778_1828963_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.4	2.3e-33
>prophage 141
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1833749	1844224	2761631		Tupanvirus(50.0%)	3	NA	NA
WP_031787988.1|1833749_1841111_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	31.1	1.0e-75
WP_031787987.1|1841561_1842812_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706132.1|1843198_1844224_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	34.3	1.0e-29
>prophage 142
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1847763	1850738	2761631		Bacillus_virus(50.0%)	4	NA	NA
WP_000590862.1|1847763_1848504_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	41.6	1.7e-39
WP_000171917.1|1848826_1849339_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356961.1|1849517_1849721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031896313.1|1849778_1850738_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.9	3.0e-12
>prophage 143
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1853979	1856463	2761631		Chrysochromulina_ericina_virus(50.0%)	2	NA	NA
WP_031788060.1|1853979_1855125_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	27.1	4.6e-23
WP_031788059.1|1855191_1856463_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	26.7	1.6e-24
>prophage 144
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1863491	1870057	2761631		Klosneuvirus(33.33%)	5	NA	NA
WP_031788053.1|1863491_1864616_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.3	4.3e-127
WP_031788052.1|1864619_1865729_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459058.1|1865741_1866770_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	34.7	6.3e-40
WP_031788051.1|1868603_1869368_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037323.1|1869370_1870057_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	6.3e-28
>prophage 145
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1878881	1879655	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078098.1|1878881_1879655_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.3	9.3e-12
>prophage 146
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1887497	1888097	2761631		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874680.1|1887497_1888097_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	49.8	1.7e-53
>prophage 147
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1893052	1894033	2761631		Catovirus(100.0%)	1	NA	NA
WP_154893133.1|1893052_1894033_-	GDP-mannose 4,6-dehydratase	NA	A0A1V0SAI6	Catovirus	35.4	1.6e-45
>prophage 148
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1897578	1898781	2761631		Tupanvirus(100.0%)	1	NA	NA
WP_031788306.1|1897578_1898781_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L0W9	Tupanvirus	22.5	6.1e-10
>prophage 149
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1907059	1908040	2761631		Lactococcus_phage(100.0%)	1	NA	NA
WP_031788299.1|1907059_1908040_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	C3U2M1	Lactococcus_phage	35.1	7.8e-40
>prophage 150
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1934809	1935487	2761631		Amsacta_moorei_entomopoxvirus(100.0%)	1	NA	NA
WP_048657563.1|1934809_1935487_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	24.6	9.3e-08
>prophage 151
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1948964	1950491	2761631		Enterobacteria_phage(100.0%)	1	NA	NA
WP_000359390.1|1948964_1950491_-	RNA-directed DNA polymerase	NA	Q2P9X6	Enterobacteria_phage	35.5	4.7e-68
>prophage 152
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1967564	1977569	2761631		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|1967564_1968365_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_031787639.1|1968759_1969548_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_031787638.1|1969548_1970883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871615.1|1970875_1972702_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|1972714_1973416_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095325.1|1974607_1975891_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	5.2e-68
WP_000375656.1|1976168_1977569_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.4	3.2e-111
>prophage 153
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	1984189	1993232	2761631	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_031787635.1|1984189_1985476_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.3	4.9e-90
WP_000177481.1|1985851_1987366_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.0	6.8e-91
WP_000449218.1|1987690_1988503_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819073.1|1988591_1991261_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	2.1e-119
WP_031787634.1|1991297_1993232_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	3.3e-143
>prophage 154
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2003354	2009762	2761631		Gordonia_phage(25.0%)	8	NA	NA
WP_000742844.1|2003354_2004194_+	nucleoid occlusion protein	NA	A0A1C9EHY8	Gordonia_phage	32.3	1.8e-08
WP_031787629.1|2004512_2004866_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779137.1|2004933_2005329_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_031787628.1|2005588_2006158_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	31.8	1.6e-05
WP_001059079.1|2006275_2006476_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000669106.1|2006870_2007062_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_031787627.1|2007133_2009014_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154158.1|2009003_2009762_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.8	1.2e-35
>prophage 155
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2024305	2026018	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031787616.1|2024305_2026018_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	8.3e-21
>prophage 156
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2031649	2032642	2761631		Faustovirus(100.0%)	1	NA	NA
WP_031787609.1|2031649_2032642_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	21.5	1.4e-07
>prophage 157
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2044844	2045537	2761631		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185857.1|2044844_2045537_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	37.6	1.7e-28
>prophage 158
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2076457	2078332	2761631		Enterococcus_phage(100.0%)	1	NA	NA
WP_031788072.1|2076457_2078332_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	30.7	6.8e-16
>prophage 159
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2111674	2112430	2761631		Planktothrix_phage(100.0%)	1	NA	NA
WP_031788273.1|2111674_2112430_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	8.4e-34
>prophage 160
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2115862	2116360	2761631		Canarypox_virus(100.0%)	1	NA	NA
WP_001065264.1|2115862_2116360_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	34.4	3.7e-22
>prophage 161
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2121388	2123772	2761631		Enterococcus_phage(100.0%)	2	NA	NA
WP_031787553.1|2121388_2123239_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.1	3.6e-235
WP_000173327.1|2123235_2123772_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	47.5	1.7e-41
>prophage 162
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2129662	2139804	2761631	holin	Klosneuvirus(50.0%)	7	NA	NA
WP_047451460.1|2129662_2131372_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.2	3.2e-57
WP_000011689.1|2131643_2131856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787549.1|2132173_2132617_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_047451458.1|2132815_2134411_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.2	1.5e-77
WP_001130053.1|2135098_2136595_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_031787546.1|2136782_2137673_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_031787544.1|2138466_2139804_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	24.8	1.4e-18
>prophage 163
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2170028	2180826	2761631		Staphylococcus_phage(25.0%)	8	NA	NA
WP_000751272.1|2170028_2170730_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	33.7	2.4e-19
WP_031787522.1|2170995_2171484_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379839.1|2172001_2173819_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.3	2.0e-36
WP_000725213.1|2174178_2174973_+	CHAP domain-containing protein	NA	NA	NA	NA	NA
WP_072324231.1|2175637_2176792_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_031787520.1|2176814_2177813_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	31.8	5.3e-36
WP_000076662.1|2177902_2178109_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_031787519.1|2178417_2180826_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.2	2.2e-128
>prophage 164
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2190067	2193103	2761631	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_031787511.1|2190067_2192173_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.0	2.0e-117
WP_031787510.1|2192581_2193103_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.9	1.4e-27
>prophage 165
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2198507	2198939	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_031787505.1|2198507_2198939_-	CHAP domain-containing protein	NA	A0A076G4W5	Staphylococcus_phage	40.0	8.0e-13
>prophage 166
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2201984	2208383	2761631		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_031787504.1|2201984_2203724_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	23.9	7.9e-35
WP_031787503.1|2204024_2206091_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206038.1|2206473_2206884_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240659.1|2206923_2207268_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_031787502.1|2207414_2208383_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.9	7.5e-11
>prophage 167
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2218013	2219006	2761631		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161546.1|2218013_2219006_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.7	1.1e-36
>prophage 168
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2228287	2228983	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000383664.1|2228287_2228983_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.7	3.7e-36
>prophage 169
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2249802	2250669	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_031787224.1|2249802_2250669_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	7.5e-79
>prophage 170
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2257647	2262830	2761631		Streptococcus_phage(50.0%)	3	NA	NA
WP_031787220.1|2257647_2259288_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.4	1.9e-94
WP_000755945.1|2259574_2259967_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_031787219.1|2259968_2262830_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	3.1e-28
>prophage 171
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2269169	2269865	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_000217463.1|2269169_2269865_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 172
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2275213	2276032	2761631		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_031787213.1|2275213_2276032_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	28.7	4.6e-09
>prophage 173
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2284229	2285787	2761631		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173860.1|2284229_2285045_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	4.0e-13
WP_000598773.1|2285037_2285787_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.2	4.0e-20
>prophage 174
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2291930	2296305	2761631		Planktothrix_phage(50.0%)	4	NA	NA
WP_000923518.1|2291930_2292593_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	34.6	1.0e-19
WP_000072156.1|2292585_2293359_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_031787204.1|2293702_2294890_+	MFS transporter	NA	NA	NA	NA	NA
WP_031787203.1|2294952_2296305_-	carboxylesterase/lipase family protein	NA	M1PNU1	Moumouvirus	34.0	3.0e-21
>prophage 175
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2299618	2301483	2761631		Mycoplasma_phage(50.0%)	2	NA	NA
WP_031787201.1|2299618_2300851_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	33.2	8.7e-20
WP_031787200.1|2300847_2301483_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	4.0e-05
>prophage 176
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2307596	2309093	2761631		Mycobacterium_phage(100.0%)	1	NA	NA
WP_031787195.1|2307596_2309093_-	serine hydrolase FLP	NA	A0A068F1M4	Mycobacterium_phage	23.3	1.9e-05
>prophage 177
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2319768	2326031	2761631		Bacillus_phage(66.67%)	5	NA	NA
WP_031787188.1|2319768_2320911_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	43.2	3.8e-54
WP_000779346.1|2321178_2321565_+	flippase GtxA	NA	NA	NA	NA	NA
WP_000482653.1|2321698_2321806_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_031787187.1|2322509_2324273_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.4	1.6e-35
WP_031787186.1|2324297_2326031_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.1	8.7e-26
>prophage 178
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2329456	2333732	2761631		Staphylococcus_phage(66.67%)	5	NA	NA
WP_031787183.1|2329456_2330575_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.0	4.6e-20
WP_031787182.1|2330586_2331273_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200960.1|2331289_2331757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787181.1|2331808_2332786_-	leukocidin/hemolysin toxin family protein	NA	A0A2H4PQH7	Staphylococcus_phage	77.7	4.4e-144
WP_031787180.1|2332793_2333732_-	leukocidin/hemolysin toxin family protein	NA	A0A2I6PF61	Staphylococcus_phage	77.9	2.3e-142
>prophage 179
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2343354	2344086	2761631		Bacillus_virus(100.0%)	1	NA	NA
WP_000615469.1|2343354_2344086_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.5e-24
>prophage 180
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2360722	2362282	2761631		Escherichia_phage(100.0%)	1	NA	NA
WP_031787164.1|2360722_2362282_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 181
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2383744	2384779	2761631		Bacillus_virus(100.0%)	1	NA	NA
WP_031787151.1|2383744_2384779_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	25.6	3.7e-16
>prophage 182
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2395184	2401738	2761631		Staphylococcus_phage(25.0%)	8	NA	NA
WP_031787143.1|2395184_2395913_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	36.8	2.4e-30
WP_031787142.1|2396045_2396609_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_031787141.1|2396784_2397240_-	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_000977029.1|2397236_2397680_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_031787139.1|2397842_2399216_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.4	3.5e-14
WP_031787138.1|2399208_2399883_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	45.2	1.2e-50
WP_000761410.1|2400017_2401073_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_000172695.1|2401072_2401738_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.4	7.7e-39
>prophage 183
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2405529	2406747	2761631		Salmonella_phage(100.0%)	1	NA	NA
WP_031787137.1|2405529_2406747_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	25.6	1.2e-34
>prophage 184
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2418810	2421479	2761631		Brazilian_cedratvirus(50.0%)	3	NA	NA
WP_000524824.1|2418810_2419710_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	27.7	1.0e-14
WP_031787129.1|2419702_2420935_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_031787128.1|2421152_2421479_+	YnfA family protein	NA	A0A218MNG8	uncultured_virus	35.6	2.1e-05
>prophage 185
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2427085	2427505	2761631		Bacillus_phage(100.0%)	1	NA	NA
WP_000920234.1|2427085_2427505_-	FosB/FosD family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.1	7.7e-37
>prophage 186
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2433180	2434062	2761631		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_031787120.1|2433180_2434062_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	44.9	7.2e-61
>prophage 187
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2441950	2442586	2761631		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_031787116.1|2441950_2442586_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	26.5	2.7e-09
>prophage 188
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2455449	2459493	2761631		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000726238.1|2455449_2456226_+	glucosaminidase domain-containing protein	NA	H9A0P7	Staphylococcus_phage	40.4	8.4e-37
WP_047451387.1|2456556_2457681_+	FAD-dependent monooxygenase	NA	A0A2K9L3K5	Tupanvirus	23.6	3.8e-14
WP_031787109.1|2457772_2458726_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	29.3	4.9e-31
WP_000737696.1|2458986_2459493_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	40.2	5.3e-08
>prophage 189
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2463440	2464247	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717374.1|2463440_2464247_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	40.4	4.6e-06
>prophage 190
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2483937	2484543	2761631		Pithovirus(100.0%)	1	NA	NA
WP_000913005.1|2483937_2484543_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	29.5	4.3e-12
>prophage 191
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2496522	2499690	2761631		Leptospira_phage(100.0%)	1	NA	NA
WP_031787086.1|2496522_2499690_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.4	2.6e-60
>prophage 192
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2523085	2524752	2761631		Planktothrix_phage(50.0%)	2	NA	NA
WP_031787082.1|2523085_2523895_+	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-18
WP_031787081.1|2523891_2524752_+	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	28.7	1.8e-11
>prophage 193
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2527793	2535904	2761631		Mycobacterium_phage(33.33%)	7	NA	NA
WP_031787078.1|2527793_2529230_+	putative DNA binding domain-containing protein	NA	A0A088F7M4	Mycobacterium_phage	30.8	3.3e-55
WP_031787983.1|2530241_2530424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787982.1|2530840_2532505_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000024499.1|2532541_2533246_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_031787981.1|2533634_2534060_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_031787980.1|2534254_2534884_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_031787979.1|2534974_2535904_+	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	30.2	5.7e-08
>prophage 194
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2539377	2544023	2761631		Staphylococcus_phage(33.33%)	6	NA	NA
WP_031787976.1|2539377_2540226_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.8	1.2e-44
WP_031787975.1|2540433_2540565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_170997532.1|2541214_2541400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031787973.1|2541413_2542022_+	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
WP_000703668.1|2542008_2542704_+	S8 family serine peptidase	NA	U5J9E4	Bacillus_phage	32.5	3.9e-09
WP_072324242.1|2543282_2544023_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	7.3e-14
>prophage 195
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2550350	2551763	2761631		Pandoravirus(100.0%)	1	NA	NA
WP_031787969.1|2550350_2551763_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.5	5.6e-47
>prophage 196
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2555782	2557345	2761631		Vibrio_phage(100.0%)	1	NA	NA
WP_031787965.1|2555782_2557345_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.7	5.4e-19
>prophage 197
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2567622	2568591	2761631		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_031787958.1|2567622_2568591_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	1.7e-15
>prophage 198
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2584320	2585229	2761631		Klosneuvirus(100.0%)	1	NA	NA
WP_031788237.1|2584320_2585229_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	36.1	2.9e-33
>prophage 199
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2588816	2596142	2761631		Staphylococcus_phage(100.0%)	1	NA	NA
WP_154893149.1|2588816_2596142_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	42.8	3.0e-19
>prophage 200
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2602385	2605257	2761631		Only_Syngen_Nebraska_virus(50.0%)	2	NA	NA
WP_031788232.1|2602385_2604191_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A0A1J0F994	Only_Syngen_Nebraska_virus	38.5	1.5e-97
WP_047451662.1|2604474_2605257_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.4	1.8e-07
>prophage 201
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2615292	2619133	2761631		Clostridium_phage(50.0%)	4	NA	NA
WP_000070865.1|2615292_2615736_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_031787715.1|2615861_2616572_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_031787714.1|2616887_2617550_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_031787713.1|2617831_2619133_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.4	4.7e-133
>prophage 202
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2627011	2628622	2761631		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159957.1|2627011_2628622_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.2	8.6e-145
>prophage 203
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2636526	2644282	2761631		Bacillus_virus(25.0%)	9	NA	NA
WP_000273359.1|2636526_2637126_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	44.1	3.3e-33
WP_154893156.1|2637126_2638203_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_031787707.1|2638189_2639026_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_031787706.1|2639109_2640159_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	44.5	1.1e-42
WP_001028193.1|2640155_2640575_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654190.1|2640682_2641207_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120498.1|2641232_2642471_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.4	1.1e-102
WP_000048713.1|2642498_2643128_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_031787705.1|2643151_2644282_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.0	2.3e-27
>prophage 204
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2654451	2654847	2761631		Caldibacillus_phage(100.0%)	1	NA	NA
WP_000932697.1|2654451_2654847_+	single-stranded DNA-binding protein	NA	A0A290GHL8	Caldibacillus_phage	37.9	1.1e-16
>prophage 205
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2660791	2661439	2761631		Moumouvirus(100.0%)	1	NA	NA
WP_031787698.1|2660791_2661439_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	28.0	2.3e-08
>prophage 206
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2668830	2670351	2761631		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178934.1|2668830_2670351_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 207
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2675983	2678011	2761631		Streptococcus_phage(100.0%)	1	NA	NA
WP_031787690.1|2675983_2678011_+	potassium-transporting ATPase subunit KdpB	NA	E4ZFI9	Streptococcus_phage	28.4	4.0e-38
>prophage 208
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2683407	2686788	2761631		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621178.1|2683407_2683770_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390825.1|2684117_2685119_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2685235_2685562_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190826.1|2685563_2686043_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041104.1|2686017_2686788_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	1.3e-21
>prophage 209
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2701291	2706017	2761631		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_031787873.1|2701291_2702821_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	27.4	9.4e-08
WP_072467288.1|2702850_2703870_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196758.1|2703993_2704248_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_031787872.1|2704247_2706017_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.7	5.3e-63
>prophage 210
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2709774	2723614	2761631	tRNA	Moraxella_phage(16.67%)	11	NA	NA
WP_031787868.1|2709774_2710800_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.8	4.8e-64
WP_031787867.1|2710900_2712511_-	MutS family DNA mismatch repair protein	NA	R4TVC0	Phaeocystis_globosa_virus	30.5	3.6e-18
WP_031787865.1|2712872_2714801_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2H4UUX5	Bodo_saltans_virus	28.5	6.7e-51
WP_001283609.1|2715054_2715690_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_031787864.1|2715988_2717071_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000638824.1|2717145_2717370_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052255.1|2717583_2718834_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	30.5	2.2e-39
WP_031787863.1|2719005_2719956_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000141408.1|2720104_2721589_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	26.2	6.8e-19
WP_154893158.1|2721585_2722545_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688486.1|2722897_2723614_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	33.1	8.0e-26
>prophage 211
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2730458	2733289	2761631		uncultured_virus(66.67%)	3	NA	NA
WP_031787855.1|2730458_2730743_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	45.2	1.4e-13
WP_001118817.1|2730814_2732431_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.9	2.6e-157
WP_048657541.1|2733127_2733289_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	82.4	1.4e-15
>prophage 212
NZ_AP020315	Staphylococcus aureus strain KUH140087	2761631	2739601	2761161	2761631	integrase	Staphylococcus_phage(94.44%)	37	2727816:2727834	2744700:2744718
2727816:2727834	attL	AACTTCTTTTAATATAGCT	NA	NA	NA	NA
WP_000791422.1|2739601_2740654_+	leukocidin/hemolysin toxin family protein	NA	A0A2H4PQH7	Staphylococcus_phage	33.2	7.9e-30
WP_031787848.1|2740675_2741692_+	leukocidin/hemolysin toxin family protein	NA	A0A2I6PER8	Staphylococcus_phage	29.5	2.1e-27
WP_000857198.1|2743147_2744185_-|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
WP_001549185.1|2744375_2745089_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
2744700:2744718	attR	AACTTCTTTTAATATAGCT	NA	NA	NA	NA
WP_000705240.1|2745166_2745349_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001208482.1|2745548_2746319_-	helix-turn-helix domain-containing protein	NA	A0A1P8L6G7	Staphylococcus_phage	100.0	6.2e-141
WP_000338186.1|2746477_2746702_+	DUF739 family protein	NA	A7TW90	Staphylococcus_phage	100.0	4.5e-36
WP_000435337.1|2746719_2746980_+	hypothetical protein	NA	A7TW91	Staphylococcus_phage	98.8	1.0e-39
WP_000351243.1|2747003_2747543_-	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_001148653.1|2747599_2748349_+	phage antirepressor KilAC domain-containing protein	NA	O80074	Staphylococcus_phage	100.0	2.0e-136
WP_001148861.1|2748364_2748562_+	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_000939496.1|2748592_2748733_+	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_000275058.1|2748747_2749380_-	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_001120197.1|2749438_2749759_+	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000066009.1|2749755_2749917_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	98.1	7.2e-20
WP_001817285.1|2750011_2750272_+	DUF2482 family protein	NA	A0A0H3U2W4	Staphylococcus_phage	98.8	1.3e-39
WP_000291505.1|2750311_2750572_+	DUF1108 family protein	NA	A0EWW8	Staphylococcus_phage	94.2	8.4e-42
WP_001205732.1|2750580_2750844_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_048657537.1|2750840_2752796_+	AAA family ATPase	NA	R9QT82	Staphylococcus_phage	99.4	0.0e+00
WP_000138479.1|2752797_2753718_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	94.8	3.3e-157
WP_071621397.1|2753798_2754416_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000934772.1|2754416_2754887_+	single-stranded DNA-binding protein	NA	A0A0E3T9H6	Staphylococcus_phage	99.4	7.4e-81
WP_000148334.1|2754916_2755810_+	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.7	7.2e-141
WP_000338530.1|2755816_2756035_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000401958.1|2756043_2756448_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	99.3	3.2e-72
WP_154893160.1|2756460_2756808_+	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	88.6	2.6e-54
WP_001126845.1|2756808_2757057_+	hypothetical protein	NA	C8CH00	Staphylococcus_phage	97.6	4.0e-41
WP_014373867.1|2757067_2757505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000197966.1|2758007_2758418_+	hypothetical protein	NA	A0A1X9H0B8	Staphylococcus_phage	76.5	7.7e-50
WP_001065054.1|2758410_2758899_+	DUF1024 family protein	NA	A0A0H3U313	Staphylococcus_phage	54.3	7.6e-12
WP_000181814.1|2758891_2759434_+	dUTP pyrophosphatase	NA	A0A068A209	Staphylococcus_phage	97.8	3.0e-94
WP_000195837.1|2759470_2759659_+	DUF1381 domain-containing protein	NA	Q4ZCG4	Staphylococcus_virus	100.0	1.6e-26
WP_001125015.1|2759633_2759834_+	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000237868.1|2759836_2759986_+	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	98.0	1.1e-17
WP_000265041.1|2759985_2760186_+	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	100.0	1.1e-28
WP_000590126.1|2760213_2760630_+	hypothetical protein	NA	A0A1X9H0U8	Staphylococcus_phage	100.0	2.9e-76
WP_000988336.1|2760861_2761161_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
