The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	0	54897	2825163	head,portal,holin,protease,transposase,tail,integrase,capsid	Staphylococcus_phage(90.62%)	59	42546:42561	57085:57100
WP_000025274.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642727.1|2848_3586_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	99.6	4.0e-129
WP_000154559.1|3609_4755_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114226.1|5675_6080_+	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268735.1|6484_7129_+|tail	phage tail protein	tail	A0EWZ9	Staphylococcus_phage	100.0	3.8e-120
WP_071621395.1|7170_7395_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|7444_7795_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001549167.1|7845_7983_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_000504557.1|8039_12584_+|tail	phage tail tape measure protein	tail	A0A075M036	Staphylococcus_phage	99.4	0.0e+00
WP_000567393.1|12580_14065_+|tail	phage tail family protein	tail	A0A075LZV5	Staphylococcus_phage	100.0	5.3e-298
WP_000582184.1|14080_17866_+	hypothetical protein	NA	D2JLF9	Staphylococcus_phage	97.8	0.0e+00
WP_000654329.1|17855_18008_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	98.0	1.2e-19
WP_001040255.1|18054_18342_+	hypothetical protein	NA	A0A075LZJ6	Staphylococcus_phage	100.0	5.8e-44
WP_000340977.1|18397_18772_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_025174055.1|19192_19966_+	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	4.0e-148
WP_011447039.1|20168_20345_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|20397_20505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|20556_20811_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|20822_21578_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000920038.1|21768_22260_+	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000702263.1|23756_24107_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|24159_24420_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669791.1|24730_24910_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_000669721.1|25867_27922_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068542.1|28245_29532_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|29731_29830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681968.1|30072_30249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691584.1|30507_30888_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991302.1|30884_31781_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_108932450.1|31781_32462_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763048.1|32458_33331_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_001221651.1|33330_34071_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|34136_34700_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966288.1|34820_35345_+	membrane protein	NA	NA	NA	NA	NA
WP_001033971.1|35404_35962_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713072.1|35958_36801_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188077.1|36857_37898_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_078096690.1|38291_38765_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	45.0	3.0e-29
WP_108957673.1|38745_39276_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_031904066.1|39387_39750_-	cystatin-like fold lipoprotein	NA	NA	NA	NA	NA
WP_031904065.1|39797_40391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001553872.1|40397_41435_-	CHAP domain-containing protein	NA	A0A1X9SGZ2	Bradyrhizobium_phage	31.4	2.7e-06
WP_150014909.1|41424_43341_-	hypothetical protein	NA	NA	NA	NA	NA
42546:42561	attL	AATTAACTTTAACATC	NA	NA	NA	NA
WP_001553877.1|43356_43524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001553878.1|43530_44889_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	30.6	3.5e-46
WP_001553882.1|45121_47617_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_031904063.1|47651_48041_-	conjugal transfer protein	NA	NA	NA	NA	NA
WP_001553885.1|48046_48307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031904062.1|48311_49373_-	conjugal transfer protein	NA	NA	NA	NA	NA
WP_001553889.1|49458_50535_-	replication initiation factor domain-containing protein	NA	NA	NA	NA	NA
WP_001553891.1|50714_51017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001553893.1|51020_51356_-	DUF961 family protein	NA	NA	NA	NA	NA
WP_001553895.1|51398_51701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000267034.1|52548_52722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001820623.1|53784_54897_+|integrase	tyrosine-type recombinase/integrase	integrase	P97010	Streptococcus_pyogenes_phage	31.6	1.7e-11
57085:57100	attR	AATTAACTTTAACATC	NA	NA	NA	NA
>prophage 2
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	58753	60318	2825163		Staphylococcus_phage(50.0%)	2	NA	NA
WP_000612782.1|58753_59164_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	50.4	3.2e-27
WP_000733625.1|59472_60318_-	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	34.3	3.4e-31
>prophage 3
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	66939	68969	2825163		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|66939_67500_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275730.1|67871_68969_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
>prophage 4
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	72999	75283	2825163		Bacillus_virus(100.0%)	2	NA	NA
WP_000284431.1|72999_74469_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
WP_000040873.1|74461_75283_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
>prophage 5
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	78985	85752	2825163		Gordonia_phage(33.33%)	5	NA	NA
WP_000572878.1|78985_80281_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|80389_80692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272070.1|80863_81556_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992921.1|81552_83745_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774565.1|83748_85752_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
>prophage 6
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	92869	97898	2825163		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|92869_93817_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147868.1|93897_95259_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.8	1.1e-103
WP_000548781.1|95428_95959_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140176.1|96205_97276_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613733.1|97343_97898_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	36.3	9.2e-30
>prophage 7
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	101349	101763	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001549145.1|101349_101763_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	37.7	5.1e-17
>prophage 8
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	106873	107503	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000153530.1|106873_107503_+	two-component system response regulator VraR	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 9
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	122987	124724	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|122987_124724_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 10
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	141084	194627	2825163	tRNA,protease	Staphylococcus_phage(86.96%)	52	NA	NA
WP_000590809.1|141084_141807_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
WP_000379978.1|141957_143085_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181398.1|143089_143560_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|143718_144318_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031108.1|144342_144495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901021.1|145271_145667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116224.1|145862_147248_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000669376.1|147710_148532_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000437967.1|148694_149807_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_001045133.1|149828_150452_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|150807_151272_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992527.1|151450_152575_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|152643_152988_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001791795.1|153370_153469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238227.1|153759_154956_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584648.1|154945_157882_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244175.1|157878_158820_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000782121.1|158940_159903_-	foldase	NA	NA	NA	NA	NA
WP_000477959.1|160107_160665_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|161397_161763_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004981.1|161904_162327_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216878.1|162460_163201_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_001245769.1|163193_164417_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737976.1|164540_165044_-	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_001790154.1|165206_165317_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000233526.1|165306_166344_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_000162881.1|166401_167325_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000167538.1|167348_168749_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000132890.1|169071_169626_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000206350.1|172082_172871_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
WP_001790220.1|172883_173423_-	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000473596.1|174222_175158_+	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782464.1|175159_176143_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000416759.1|176384_176528_+	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000416756.1|177265_177409_+	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_001092605.1|177473_180467_+	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000566596.1|180459_181704_+	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_000504439.1|181719_182238_+	flavoprotein	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000691541.1|182247_183621_+	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_001096791.1|183643_184336_+	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000581553.1|184332_185094_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	99.6	1.7e-130
WP_000586140.1|185090_185789_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_001092766.1|186262_186829_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	99.5	9.5e-99
WP_001039435.1|187792_188500_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001039447.1|188624_189347_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001038867.1|189404_190124_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001038692.1|190244_190964_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	97.9	4.3e-128
WP_011447030.1|190912_191020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038759.1|191121_191838_+|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_001038688.1|191988_192708_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001791797.1|192772_192907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000028669.1|193070_194627_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
>prophage 11
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	202543	238404	2825163	protease,transposase	Staphylococcus_phage(88.24%)	41	NA	NA
WP_001549059.1|202543_202687_+|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_000070811.1|203290_203674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|203684_203861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000809857.1|203862_204048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000494956.1|204161_204803_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000414205.1|205020_205572_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000627551.1|205669_206014_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000669046.1|206054_206681_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000070653.1|206756_207752_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_001795535.1|207832_208483_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_011443643.1|208785_209241_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_000348360.1|209399_210878_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_000778525.1|210882_211884_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.2e-186
WP_000718107.1|211880_212138_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672014.1|212203_212677_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_002868962.1|212681_213428_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000093392.1|213802_214288_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000109906.1|214423_216016_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933822.1|216386_217580_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366154.1|217704_218613_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000453320.1|218824_219658_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000093392.1|221677_222163_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000623472.1|222483_222837_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	88.0	6.5e-13
WP_001200542.1|222833_223199_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091445.1|223454_223757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|224016_224730_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168904.1|225169_225805_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030465.1|226100_226544_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001153742.1|226530_226974_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671052.1|227086_227557_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_000384171.1|227755_227980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|228255_229110_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000163235.1|229404_229800_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_000989121.1|229817_231110_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221180.1|231109_231424_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	99.0	9.8e-53
WP_001261681.1|231946_233449_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000077344.1|233929_234973_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
WP_000493896.1|234979_235612_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	8.4e-112
WP_001159022.1|235622_236804_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_001008551.1|236816_237281_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001196354.1|237402_238404_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
>prophage 12
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	241564	255678	2825163	tRNA	Staphylococcus_phage(100.0%)	7	NA	NA
WP_000764419.1|241564_242128_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|242124_243078_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025061.1|243187_244369_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_001804761.1|244656_247074_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_000836465.1|247095_247407_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001050545.1|247732_254293_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	2.3e-305
WP_000285019.1|254409_255678_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	100.0	4.1e-57
>prophage 13
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	267330	272658	2825163		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091387.1|267330_268188_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_001048368.1|268216_268813_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118293.1|268833_272658_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 14
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	281563	283270	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862083.1|281563_283270_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	100.0	1.2e-274
>prophage 15
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	289886	292517	2825163	tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|289886_291149_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|291242_292517_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 16
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	296286	300421	2825163		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808845.1|296286_297891_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291430.1|297877_299038_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553926.1|299151_299598_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174282.1|299677_300421_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.0	4.9e-18
>prophage 17
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	317961	321159	2825163		Streptomyces_phage(100.0%)	1	NA	NA
WP_108932428.1|317961_321159_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.7	8.5e-136
>prophage 18
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	326092	327850	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232648.1|326092_327850_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 19
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	334711	342875	2825163		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|334711_335416_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_011443641.1|335415_337077_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_108932427.1|337575_339063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038308.1|339356_341987_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114452.1|342002_342875_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.0e-42
>prophage 20
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	346789	357942	2825163	tRNA,protease	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|346789_347710_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|347802_347925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|348122_350060_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049154.1|350485_351979_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|352207_352735_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|352763_352964_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|353010_353367_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032659.1|353508_354117_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.5	1.9e-20
WP_001280018.1|354135_355065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|355069_355180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127573.1|355227_356529_+	trigger factor	NA	NA	NA	NA	NA
WP_000472302.1|356679_357942_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
>prophage 21
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	367509	374156	2825163	integrase,tRNA	Catovirus(50.0%)	4	368481:368497	380570:380586
WP_000425353.1|367509_370140_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
368481:368497	attL	TTTAAAAGAACAAGATT	NA	NA	NA	NA
WP_001108346.1|370152_371424_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000261115.1|371693_372401_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_000868132.1|373070_374156_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
380570:380586	attR	TTTAAAAGAACAAGATT	NA	NA	NA	NA
>prophage 22
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	377487	378219	2825163		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|377487_378219_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 23
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	386578	421958	2825163	tRNA	uncultured_Mediterranean_phage(13.33%)	31	NA	NA
WP_001005767.1|386578_387583_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019172.1|387584_388610_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|388632_389772_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_150060315.1|389790_390051_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_000749795.1|390325_392605_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_108932381.1|392807_395081_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000364542.1|395102_395621_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058583.1|396048_398238_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|398249_398702_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717800.1|398698_399574_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|400034_401297_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|401312_403079_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|403411_403540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|403539_404313_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102735.1|404473_405748_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.8e-105
WP_000704122.1|405832_406255_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|406354_406537_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|406576_406723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985886.1|406959_407973_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409167.1|408284_409427_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.3	8.3e-33
WP_000066097.1|409427_410546_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567028.1|411007_411676_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283311.1|411677_414155_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_150060316.1|414497_417128_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|417190_417451_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939057.1|417454_417883_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|417897_418206_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342266.1|418490_419129_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	1.6e-09
WP_000137775.1|419131_420055_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|420066_421335_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|421334_421958_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 24
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	428630	431017	2825163		Lactococcus_phage(50.0%)	2	NA	NA
WP_000542309.1|428630_429851_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	5.0e-52
WP_001548981.1|430264_431017_+	enterotoxin	NA	A0EX09	Staphylococcus_phage	39.8	4.6e-48
>prophage 25
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	438286	444450	2825163		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|438286_438748_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_001805151.1|438752_440954_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.2e-32
WP_001282562.1|441010_441985_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|442029_442281_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368341.1|442626_444450_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 26
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	447940	451048	2825163		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|447940_449773_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_150060317.1|449908_451048_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	26.6	5.2e-27
>prophage 27
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	457518	458466	2825163		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|457518_458466_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 28
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	461519	475247	2825163	tRNA	Klosneuvirus(25.0%)	13	NA	NA
WP_001030080.1|461519_462911_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001789866.1|463245_463869_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411299.1|463879_464698_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217261.1|464758_466558_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
WP_001283055.1|466781_467888_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624584.1|468018_468696_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683931.1|468698_469799_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_001062180.1|469912_471259_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000924214.1|471268_472159_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|472284_473070_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564316.1|473111_473975_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|473961_474372_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|474647_475247_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 29
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	481420	482044	2825163		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|481420_482044_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 30
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	487588	490400	2825163		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019687.1|487588_488935_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.7	6.3e-64
WP_000202189.1|488927_490400_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.3	6.2e-81
>prophage 31
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	497900	504471	2825163		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|497900_499238_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|499230_499461_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183378.1|499438_500320_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	26.1	8.9e-11
WP_001124985.1|500751_501204_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942211.1|501219_502899_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291535.1|503049_504471_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 32
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	511300	512707	2825163		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|511300_512707_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 33
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	517353	518838	2825163		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|517353_518838_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 34
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	522367	530652	2825163		Klosneuvirus(20.0%)	10	NA	NA
WP_001171351.1|522367_523276_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	31.5	3.4e-05
WP_000365246.1|523357_523900_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|524004_524454_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|524502_525390_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|525467_525974_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|526065_526797_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368653.1|526789_527332_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|527324_528062_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|528194_528920_+	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987772.1|528900_530652_+	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
>prophage 35
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	538358	541037	2825163		Bacillus_phage(50.0%)	3	NA	NA
WP_001151997.1|538358_538607_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|538714_539668_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000902119.1|539657_541037_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
>prophage 36
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	550461	555928	2825163		Bacillus_phage(25.0%)	7	NA	NA
WP_001043863.1|550461_550734_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450553.1|551164_551737_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|551739_552465_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001096471.1|552466_553426_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|553517_553967_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|554175_554376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269929.1|554761_555928_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
>prophage 37
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	559590	560166	2825163		Bacillus_virus(100.0%)	1	NA	NA
WP_000005213.1|559590_560166_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
>prophage 38
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	563536	571042	2825163	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_000361544.1|563536_564739_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_000049919.1|564725_565697_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|565720_568414_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858789.1|568735_570028_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
WP_000362212.1|570355_571042_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	5.5e-08
>prophage 39
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	574782	575460	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_001795446.1|574782_575460_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.9e-24
>prophage 40
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	584734	585613	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_001133011.1|584734_585613_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	6.2e-20
>prophage 41
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	624293	633683	2825163		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|624293_624998_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|625242_625437_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|625448_625700_+	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000404650.1|625737_626862_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|626877_627315_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934885.1|627738_628695_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|628894_629374_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166059.1|629388_630228_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
WP_000159902.1|630313_630847_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913315.1|630839_631268_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473652.1|631279_631780_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|631779_632001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342125.1|632192_633683_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
>prophage 42
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	637091	639103	2825163		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|637091_637751_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|637747_639103_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 43
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	645268	646060	2825163		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|645268_646060_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 44
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	650540	655571	2825163	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138402.1|650540_651677_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	3.3e-34
WP_001788788.1|651708_652338_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_001215907.1|652356_652626_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|652788_653097_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|653267_653468_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|653664_654066_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|654305_655571_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 45
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	662714	667563	2825163	transposase	Lactococcus_phage(66.67%)	4	NA	NA
WP_000093392.1|662714_663200_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000942300.1|664157_665759_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
WP_001162359.1|665905_666808_+	RNA-binding virulence regulatory protein CvfB	NA	NA	NA	NA	NA
WP_000093392.1|667077_667563_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
>prophage 46
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	671587	675041	2825163		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|671587_672439_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|672445_673087_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077571.1|673226_675041_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
>prophage 47
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	678455	679157	2825163		Tupanvirus(100.0%)	1	NA	NA
WP_000571258.1|678455_679157_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	1.5e-13
>prophage 48
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	686678	689033	2825163		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000154116.1|686678_687461_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.3	1.2e-27
WP_000173832.1|687462_688461_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	35.3	3.8e-34
WP_000604817.1|688466_689033_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
>prophage 49
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	693351	694614	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000283015.1|693351_694614_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.1	2.2e-95
>prophage 50
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	704273	708667	2825163		Bacillus_phage(50.0%)	2	NA	NA
WP_001289549.1|704273_706676_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.2	3.9e-93
WP_001548666.1|706675_708667_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	8.0e-116
>prophage 51
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	714486	716133	2825163		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|714486_716133_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 52
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	719802	720924	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691284.1|719802_720924_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 53
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	725073	730729	2825163		Phage_Wrath(25.0%)	6	NA	NA
WP_001208760.1|725073_725697_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	3.5e-17
WP_001789887.1|726076_727093_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	4.8e-16
WP_000688126.1|727114_728092_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	100.0	2.1e-186
WP_001085655.1|728248_728518_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|728971_729121_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_150060318.1|729211_730729_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	1.8e-91
>prophage 54
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	740865	745141	2825163		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|740865_741399_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|741537_741726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|741838_742441_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670300.1|742437_743529_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603968.1|743532_744264_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000593436.1|744232_745141_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 55
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	751453	756113	2825163	capsid	Staphylococcus_phage(80.0%)	8	NA	NA
WP_170943459.1|751453_751942_-|capsid	minor capsid protein	capsid	A0A2H4IYR8	uncultured_Caudovirales_phage	76.7	2.5e-23
WP_000956747.1|752083_752335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000477492.1|752463_752568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|753079_753265_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|753692_753803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|754503_754710_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_001789892.1|755002_755227_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	4.3e-18
WP_001789891.1|755915_756113_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.7e-10
>prophage 56
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	761182	761659	2825163		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|761182_761659_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 57
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	767601	774073	2825163		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|767601_768420_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|768884_769427_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516259.1|769432_771442_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_000073352.1|771454_774073_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 58
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	783487	784531	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|783487_784531_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 59
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	788732	794402	2825163		Bacillus_virus(33.33%)	4	NA	NA
WP_000664766.1|788732_790019_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	27.9	6.7e-15
WP_000089940.1|790018_791284_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.5	7.7e-40
WP_001293307.1|791314_792028_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000035767.1|792032_794402_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	7.3e-84
>prophage 60
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	799416	811229	2825163	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|799416_800388_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282305.1|800402_801320_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|801488_801839_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043634.1|802224_804342_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|804346_804664_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|804660_804945_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097466.1|804965_806141_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036631.1|806161_806629_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001820550.1|806918_811229_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 61
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	815527	816298	2825163		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473705.1|815527_816298_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 62
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	821072	834743	2825163	tRNA,protease	Erwinia_phage(16.67%)	11	NA	NA
WP_000379054.1|821072_822476_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|822541_823087_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015597.1|823083_823980_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.5	3.6e-31
WP_000195254.1|824396_825704_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001548566.1|825859_827935_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593193.1|828108_828981_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672867.1|829153_830398_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041662.1|830425_831544_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_061821480.1|831770_832679_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020801.1|832700_833867_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176394.1|833975_834743_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 63
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	848127	850185	2825163		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|848127_848859_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|848974_849208_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|849450_850185_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 64
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	860555	862550	2825163		Moumouvirus(100.0%)	1	NA	NA
WP_000579564.1|860555_862550_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 65
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	865697	866633	2825163	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161299.1|865697_866633_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.9	1.2e-10
>prophage 66
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	871645	873902	2825163		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|871645_872845_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|873060_873279_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368227.1|873278_873902_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.7	3.6e-22
>prophage 67
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	877216	877828	2825163		Pandoravirus(100.0%)	1	NA	NA
WP_001040245.1|877216_877828_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	6.2e-27
>prophage 68
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	881795	886406	2825163		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|881795_882896_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767028.1|882897_884172_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|884189_885071_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|885098_886406_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 69
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	890869	893623	2825163	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384691.1|890869_893623_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	3.6e-90
>prophage 70
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	913219	913408	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245802.1|913219_913408_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	86.9	3.8e-20
>prophage 71
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	922490	924450	2825163		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001802045.1|922490_922715_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|922671_922818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857483.1|923490_924450_+	alpha-hemolysin	NA	A0A2H4PQH7	Staphylococcus_phage	29.9	2.8e-34
>prophage 72
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	938508	943066	2825163		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|938508_938823_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249285.1|938995_941344_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.3	1.1e-15
WP_000161942.1|941353_943066_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	8.9e-15
>prophage 73
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	947807	948866	2825163	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003559.1|947807_948866_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 74
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	960813	963721	2825163		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|960813_961296_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|961297_961840_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|961909_962299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|962301_962556_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757569.1|962794_963721_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	1.7e-12
>prophage 75
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	975238	977086	2825163		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|975238_977086_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 76
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	985223	994056	2825163		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|985223_986318_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|986330_986870_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|987013_987289_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|987456_988863_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863441.1|988866_990159_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|990249_991227_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|991230_992343_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668339.1|992513_993140_-	YkyA family protein	NA	NA	NA	NA	NA
WP_000957036.1|993504_994056_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	1.6e-13
>prophage 77
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1000170	1004550	2825163		Bacillus_virus(50.0%)	5	NA	NA
WP_001289614.1|1000170_1000404_+	glutaredoxin-like protein NrdH	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040054.1|1000640_1002359_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|1002361_1002628_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505965.1|1002781_1003324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685079.1|1003377_1004550_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	9.0e-75
>prophage 78
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1007729	1022489	2825163		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921968.1|1007729_1009130_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|1009122_1009929_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101908.1|1010193_1011441_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709290.1|1011462_1012941_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.5	9.2e-77
WP_000238664.1|1012955_1013522_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030812.1|1013524_1014553_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000483713.1|1014545_1016030_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032728.1|1016008_1018198_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.3e-140
WP_000666799.1|1018190_1018862_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1018863_1019127_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1019126_1019831_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010412.1|1019834_1020959_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1020945_1021428_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225837.1|1021628_1022489_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.2	5.3e-40
>prophage 79
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1032886	1036657	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074556.1|1032886_1036657_+	glucosaminidase domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 80
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1040323	1041334	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676548.1|1040323_1041334_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.2e-16
>prophage 81
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1049715	1049931	2825163		Enterococcus_phage(100.0%)	1	NA	NA
WP_000867357.1|1049715_1049931_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
>prophage 82
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1054496	1055138	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571179.1|1054496_1055138_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
>prophage 83
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1065333	1070541	2825163		Pithovirus(33.33%)	3	NA	NA
WP_150014935.1|1065333_1067655_-	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928412.1|1067873_1068677_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_050959554.1|1068978_1070541_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	4.9e-36
>prophage 84
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1089470	1091279	2825163		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082731.1|1089470_1091279_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	9.3e-47
>prophage 85
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1098074	1099061	2825163		Bacillus_virus(100.0%)	1	NA	NA
WP_001067038.1|1098074_1099061_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.4	1.0e-15
>prophage 86
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1102712	1104726	2825163		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1102712_1103654_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140050.1|1103643_1104726_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 87
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1113321	1120131	2825163		Micromonas_sp._RCC1109_virus(33.33%)	4	NA	NA
WP_108932379.1|1113321_1114467_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
WP_001047066.1|1114576_1115446_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000353955.1|1115504_1118114_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044214.1|1118316_1120131_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	1.1e-36
>prophage 88
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1125248	1128902	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000154930.1|1125248_1128902_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	3.5e-24
>prophage 89
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1139056	1146044	2825163		Paramecium_bursaria_Chlorella_virus(33.33%)	6	NA	NA
WP_000185326.1|1139056_1139986_+	glycerophosphodiester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	28.7	4.0e-17
WP_000138487.1|1140318_1141563_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1141671_1142862_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838037.1|1143169_1144297_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1144657_1145035_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1145450_1146044_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 90
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1155964	1159592	2825163		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009697.1|1155964_1157440_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	6.9e-48
WP_000046076.1|1157570_1158779_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001143497.1|1159232_1159592_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.1e-14
>prophage 91
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1163635	1166304	2825163		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1163635_1164850_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129653.1|1164846_1166304_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.3	4.4e-39
>prophage 92
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1179424	1182947	2825163		environmental_halophage(50.0%)	3	NA	NA
WP_001006454.1|1179424_1180675_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.4e-110
WP_000205572.1|1180780_1182088_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1182185_1182947_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 93
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1186433	1190640	2825163	integrase	Planktothrix_phage(50.0%)	4	1182209:1182223	1197083:1197097
1182209:1182223	attL	CTTTAACCCATTCAT	NA	NA	NA	NA
WP_108932380.1|1186433_1187459_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	2.7e-27
WP_001065801.1|1187708_1188005_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001018962.1|1187997_1188384_-	topiosmerase	NA	NA	NA	NA	NA
WP_000868132.1|1189554_1190640_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
1197083:1197097	attR	CTTTAACCCATTCAT	NA	NA	NA	NA
>prophage 94
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1193971	1202489	2825163		Streptococcus_phage(60.0%)	11	NA	NA
WP_001072201.1|1193971_1194703_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_001092058.1|1195095_1195758_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000290485.1|1196753_1197134_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_000589549.1|1197291_1197648_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001190695.1|1197791_1198112_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422908.1|1198261_1198801_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150017.1|1198883_1199600_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.6	3.0e-17
WP_000974460.1|1199747_1200170_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1200568_1201063_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255561.1|1201217_1201835_+	amino acid transporter	NA	NA	NA	NA	NA
WP_001140693.1|1201907_1202489_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	5.5e-33
>prophage 95
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1205873	1207117	2825163		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1205873_1206074_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_001548082.1|1206430_1207117_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	3.8e-33
>prophage 96
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1218816	1224967	2825163		Staphylococcus_phage(33.33%)	6	NA	NA
WP_001085185.1|1218816_1219281_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
WP_001050064.1|1219302_1221675_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.2	2.7e-94
WP_001165952.1|1221708_1222449_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1222564_1222798_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1222864_1223323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1223662_1224967_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 97
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1234024	1239843	2825163		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1234024_1234612_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1235184_1236129_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1236238_1237234_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_150014947.1|1237230_1238142_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1238907_1239843_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 98
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1244288	1247135	2825163		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662681.1|1244288_1247135_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 99
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1250453	1251293	2825163		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_150014950.1|1250453_1251293_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 100
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1257371	1263082	2825163		Streptococcus_phage(66.67%)	5	NA	NA
WP_001548033.1|1257371_1258454_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	1.3e-43
WP_000686342.1|1258817_1259684_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192947.1|1259827_1260469_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	48.3	4.0e-37
WP_000258151.1|1260638_1261694_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1262011_1263082_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 101
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1272364	1295815	2825163		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616842.1|1272364_1273126_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
WP_001245579.1|1273122_1274079_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876321.1|1274065_1275037_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.6	2.1e-138
WP_000499195.1|1275075_1275231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1275632_1276604_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|1276721_1278827_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1278789_1279188_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|1279988_1280855_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1280874_1281375_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1281715_1283221_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001790641.1|1283298_1283400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429014.1|1283490_1284408_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_000197271.1|1285030_1285573_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663022.1|1285923_1286982_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.3	1.1e-20
WP_000180991.1|1287221_1288736_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589260.1|1288728_1289706_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	5.4e-25
WP_000983677.1|1289927_1291709_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525111.1|1291720_1293604_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_108932384.1|1293874_1295815_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	2.2e-110
>prophage 102
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1298954	1308800	2825163		Pandoravirus(12.5%)	12	NA	NA
WP_001217785.1|1298954_1300106_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
WP_000604514.1|1300089_1300683_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|1301033_1301702_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1301703_1302123_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1302126_1302840_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000637687.1|1302938_1303523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093553.1|1303802_1304243_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1304584_1305058_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1305032_1305719_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244412.1|1305718_1306774_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
WP_000702782.1|1306845_1307829_-	lipoteichoic acid-specific glycosylation protein CsbB	NA	A0A192Y8W7	Salmonella_phage	43.3	1.5e-62
WP_000931237.1|1307960_1308800_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.3	5.1e-56
>prophage 103
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1320412	1321786	2825163		Bandra_megavirus(100.0%)	1	NA	NA
WP_000952048.1|1320412_1321786_-	deoxyribodipyrimidine photo-lyase	NA	A0A2K9V7Z5	Bandra_megavirus	29.2	5.6e-44
>prophage 104
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1326763	1333043	2825163		Bacillus_phage(33.33%)	6	NA	NA
WP_000857602.1|1326763_1328437_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	22.9	4.5e-11
WP_000737143.1|1328433_1330065_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469890.1|1330283_1331159_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1331330_1332014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148828.1|1332016_1332475_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820892.1|1332476_1333043_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	6.1e-21
>prophage 105
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1339971	1340445	2825163		Pandoravirus(100.0%)	1	NA	NA
WP_000833483.1|1339971_1340445_-	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	39.4	2.1e-14
>prophage 106
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1345707	1346505	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1345707_1346505_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 107
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1351336	1352098	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1351336_1352098_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 108
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1356472	1359664	2825163	transposase	Acanthamoeba_polyphaga_mimivirus(50.0%)	3	NA	NA
WP_001030771.1|1356472_1357516_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
WP_000980137.1|1357666_1358734_-	membrane protein	NA	NA	NA	NA	NA
WP_001105938.1|1358989_1359664_+|transposase	IS6-like element ISSau6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	88.4	2.8e-113
>prophage 109
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1364839	1365637	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1364839_1365637_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 110
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1368864	1372823	2825163		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1368864_1370592_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793070.1|1371012_1372308_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1372424_1372823_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 111
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1379757	1380501	2825163		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1379757_1380501_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 112
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1391652	1392213	2825163	integrase	Streptococcus_phage(100.0%)	1	1385806:1385820	1395802:1395816
1385806:1385820	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1391652_1392213_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1391652_1392213_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1395802:1395816	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 113
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1405284	1408638	2825163		Tupanvirus(50.0%)	3	NA	NA
WP_001200748.1|1405284_1406295_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001788287.1|1406793_1407315_-	YwhD family protein	NA	NA	NA	NA	NA
WP_000180230.1|1407342_1408638_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	2.1e-24
>prophage 114
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1422188	1423511	2825163		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860582.1|1422188_1423511_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.3	2.2e-109
>prophage 115
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1434816	1435473	2825163		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_150060323.1|1434816_1435473_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	45.9	2.1e-44
>prophage 116
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1439114	1442435	2825163		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|1439114_1440491_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_000347061.1|1441034_1442435_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 117
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1465735	1466398	2825163		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067262.1|1465735_1466398_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 118
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1472977	1474165	2825163		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250824.1|1472977_1474165_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	7.5e-45
>prophage 119
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1477193	1488147	2825163		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1477193_1479275_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1479397_1479868_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1479933_1480347_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1480444_1480699_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_001788197.1|1480835_1484432_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1484595_1488147_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 120
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1491830	1496613	2825163	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1491830_1492379_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1492391_1492574_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1492629_1492773_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872873.1|1492887_1493457_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664738.1|1493537_1494062_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390328.1|1494061_1494808_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1494815_1495220_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631963.1|1495212_1496613_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.0	3.2e-55
>prophage 121
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1502624	1505081	2825163	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1502624_1505081_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 122
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1523889	1534161	2825163	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1523889_1525377_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1525429_1525522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613716.1|1525915_1526392_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1526388_1526754_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167924.1|1526731_1527535_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.3	1.3e-21
WP_000057594.1|1527750_1528683_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148605.1|1528861_1529743_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1529971_1532065_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1532321_1532861_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176715.1|1532865_1534161_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 123
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1543417	1545882	2825163		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1543417_1544383_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252529.1|1544529_1545882_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 124
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1551764	1554862	2825163	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051116.1|1551764_1553738_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.0	1.2e-92
WP_000279926.1|1554022_1554862_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 125
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1558768	1559386	2825163		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1558768_1559386_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 126
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1568242	1569940	2825163		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109047.1|1568242_1569940_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 127
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1586588	1592826	2825163		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1586588_1587593_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825521.1|1587924_1588767_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1588803_1589463_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569286.1|1589466_1590492_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	8.2e-32
WP_001036663.1|1590785_1591928_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634105.1|1591911_1592826_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	6.6e-49
>prophage 128
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1619015	1621776	2825163		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072584.1|1619015_1620227_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
WP_150014959.1|1620219_1621776_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	3.4e-287
>prophage 129
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1635391	1640841	2825163	transposase	Paenibacillus_phage(25.0%)	5	NA	NA
WP_000159787.1|1635391_1635664_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041883.1|1636062_1636767_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.6	2.6e-29
WP_000551776.1|1637159_1637696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424966.1|1637808_1639350_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1639374_1640841_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 130
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1649801	1651325	2825163		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930486.1|1649801_1651325_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.9e-40
>prophage 131
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1660182	1681588	2825163	coat,terminase,integrase	Staphylococcus_phage(79.17%)	31	1659300:1659314	1674321:1674335
1659300:1659314	attL	AAATTATATATTATT	NA	NA	NA	NA
WP_001286805.1|1660182_1660368_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
WP_000139423.1|1660369_1660480_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001795626.1|1660550_1660703_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_000801979.1|1661550_1662519_-	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
WP_001293080.1|1662795_1663365_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	96.3	4.3e-99
WP_000358778.1|1663361_1663703_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	100.0	1.7e-58
WP_000771356.1|1663705_1664233_-|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	96.0	1.2e-87
WP_000448775.1|1664283_1664502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000846292.1|1664519_1665098_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	39.5	1.6e-29
WP_001161659.1|1665109_1665451_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	96.5	2.1e-56
WP_001019769.1|1665797_1666439_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	93.0	9.4e-111
WP_000998182.1|1666435_1666720_-	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	92.6	1.0e-45
WP_108932420.1|1666721_1667084_-	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	97.5	6.4e-64
WP_150060324.1|1667369_1668839_-	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	98.6	1.2e-286
WP_001103936.1|1669788_1670106_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	53.4	1.1e-19
WP_001058486.1|1670108_1670318_-	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_031824147.1|1670310_1670457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000091734.1|1670468_1670741_-	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	92.2	3.9e-42
WP_000794656.1|1670741_1670954_-	helix-turn-helix transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	61.4	2.6e-17
WP_000668212.1|1671097_1671793_+	helix-turn-helix transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	62.5	2.3e-09
WP_000270130.1|1672248_1673466_+|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	95.5	1.1e-216
WP_000357934.1|1673948_1674779_+	KilA-N domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	72.6	2.6e-113
1674321:1674335	attR	AAATTATATATTATT	NA	NA	NA	NA
WP_000897044.1|1674960_1675203_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_000934799.1|1675254_1675758_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1675778_1676075_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052483.1|1676318_1676510_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001218732.1|1676595_1677693_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157345.1|1677704_1677908_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_001077602.1|1677937_1678819_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001550052.1|1678975_1679821_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655692.1|1680484_1681588_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
>prophage 132
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1691506	1692349	2825163		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209565.1|1691506_1692349_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	7.7e-12
>prophage 133
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1713561	1716296	2825163		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280803.1|1713561_1714584_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	29.7	1.1e-09
WP_001191946.1|1714561_1715506_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449060.1|1715495_1716296_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.9	8.9e-42
>prophage 134
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1734527	1735205	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911019.1|1734527_1735205_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	9.2e-32
>prophage 135
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1750727	1755167	2825163		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549278.1|1750727_1755167_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	24.3	8.2e-28
>prophage 136
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1767130	1768792	2825163		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570071.1|1767130_1767790_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736798.1|1767841_1768792_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 137
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1778082	1779519	2825163		Pandoravirus(100.0%)	1	NA	NA
WP_000163988.1|1778082_1779519_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.8	3.7e-30
>prophage 138
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1783279	1787819	2825163		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000950281.1|1783279_1785034_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	9.0e-63
WP_000608826.1|1785280_1785955_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975357.1|1786094_1787819_-	poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 139
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1797146	1798190	2825163		Synechococcus_phage(100.0%)	1	NA	NA
WP_108932411.1|1797146_1798190_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.6	2.1e-14
>prophage 140
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1805405	1806935	2825163		Vibrio_phage(100.0%)	1	NA	NA
WP_000838204.1|1805405_1806935_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	52.0	5.3e-11
>prophage 141
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1815810	1817316	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008401.1|1815810_1817316_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	3.5e-39
>prophage 142
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1828063	1833422	2825163		Tetraselmis_virus(50.0%)	3	NA	NA
WP_150060327.1|1828063_1830313_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	44.9	1.1e-185
WP_000837105.1|1830900_1831869_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127982.1|1831865_1833422_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 143
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1843632	1845691	2825163		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818914.1|1843632_1844730_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166917.1|1845112_1845691_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.4	9.7e-14
>prophage 144
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1854226	1855819	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_000067349.1|1854226_1855819_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.1e-22
>prophage 145
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1873979	1875164	2825163		Klosneuvirus(100.0%)	1	NA	NA
WP_001084436.1|1873979_1875164_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.2	9.2e-35
>prophage 146
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1880000	1890284	2825163		Tupanvirus(50.0%)	3	NA	NA
WP_000605282.1|1880000_1887176_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	29.5	1.0e-67
WP_000826862.1|1887622_1888873_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706137.1|1889258_1890284_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.9	2.9e-29
>prophage 147
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1893822	1896820	2825163		Bacillus_virus(50.0%)	4	NA	NA
WP_000590853.1|1893822_1894563_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	41.1	1.5e-38
WP_000171919.1|1894904_1895417_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1895595_1895799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013484.1|1895860_1896820_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 148
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1900175	1902648	2825163		Catovirus(50.0%)	2	NA	NA
WP_000723454.1|1900175_1901321_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.4	2.4e-24
WP_108932405.1|1901397_1902648_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.8	1.0e-20
>prophage 149
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1909483	1916047	2825163		Klosneuvirus(33.33%)	5	NA	NA
WP_000413171.1|1909483_1910608_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028293.1|1910611_1911721_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459054.1|1911733_1912762_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.0	3.3e-41
WP_000565302.1|1914593_1915358_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037332.1|1915360_1916047_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 150
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1920355	1920565	2825163	transposase	Lactococcus_phage(100.0%)	1	NA	NA
WP_077442727.1|1920355_1920565_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	41.8	7.0e-07
>prophage 151
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1927328	1928102	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1927328_1928102_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 152
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1936137	1936737	2825163		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1936137_1936737_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 153
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1941674	1942655	2825163		Catovirus(100.0%)	1	NA	NA
WP_001789408.1|1941674_1942655_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
>prophage 154
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1946025	1947228	2825163		Tupanvirus(100.0%)	1	NA	NA
WP_150014965.1|1946025_1947228_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	20.8	1.1e-08
>prophage 155
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1955494	1959704	2825163		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|1955494_1956475_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|1956705_1957698_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924997.1|1957713_1958709_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136636.1|1958705_1959704_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.5	1.2e-14
>prophage 156
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	1995968	1997036	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816129.1|1995968_1997036_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.5	3.5e-09
>prophage 157
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2008241	2011241	2825163		Bacillus_phage(100.0%)	2	NA	NA
WP_000815640.1|2008241_2009591_+	recombinase family protein	NA	Q9T200	Bacillus_phage	24.8	1.4e-18
WP_108932401.1|2009612_2011241_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	5.4e-46
>prophage 158
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2020621	2021296	2825163	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001106057.1|2020621_2021296_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 159
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2026952	2036964	2825163		Bacillus_phage(40.0%)	7	NA	NA
WP_000088648.1|2026952_2027753_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	4.6e-38
WP_001104172.1|2028142_2028931_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_001060154.1|2028931_2030266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|2030258_2032085_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|2032097_2032799_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095327.1|2034002_2035286_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	2.3e-68
WP_000375647.1|2035563_2036964_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 160
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2043653	2052692	2825163	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884334.1|2043653_2044940_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	2.7e-88
WP_108932398.1|2045318_2046833_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.6	3.0e-91
WP_000449218.1|2047158_2047971_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_024936933.1|2048057_2050721_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	3.5e-119
WP_000255586.1|2050757_2052692_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 161
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2062774	2066039	2825163		Faecalibacterium_phage(33.33%)	5	NA	NA
WP_000742837.1|2062774_2063614_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2064066_2064420_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779136.1|2064487_2064883_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054118.1|2065142_2065712_+	helix-turn-helix domain-containing protein	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2065838_2066039_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
>prophage 162
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2070339	2071098	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_000154162.1|2070339_2071098_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 163
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2085355	2087068	2825163		Planktothrix_phage(100.0%)	1	NA	NA
WP_108932394.1|2085355_2087068_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 164
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2092693	2093707	2825163		Faustovirus(100.0%)	1	NA	NA
WP_000639183.1|2092693_2093707_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	22.2	2.1e-08
>prophage 165
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2106098	2106791	2825163		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185864.1|2106098_2106791_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	1.7e-28
>prophage 166
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2131620	2133480	2825163		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125611.1|2131620_2133480_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 167
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2159236	2160987	2825163		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143419.1|2159236_2160124_+	nisin susceptibility-associated two-component system sensor histidine kinase NsaS	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2160231_2160987_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 168
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2164407	2164905	2825163		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2164407_2164905_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 169
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2169957	2172341	2825163		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071717.1|2169957_2171808_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	1.2e-235
WP_000601724.1|2171804_2172341_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	49.4	8.6e-41
>prophage 170
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2178186	2188300	2825163	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|2178186_2179896_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|2180173_2180386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000708242.1|2180666_2181110_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_150014984.1|2181303_2182902_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	37.0	1.4e-78
WP_001791775.1|2182961_2183291_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2183586_2185083_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031413.1|2185275_2186166_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	28.6	1.0e-06
WP_001237629.1|2186288_2186705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030057.1|2186962_2188300_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 171
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2216436	2220224	2825163		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751267.1|2216436_2217138_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	4.0e-38
WP_000996736.1|2217413_2217902_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|2218412_2220224_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 172
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2228657	2232513	2825163		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_000161357.1|2228657_2229656_+	D-lactate dehydrogenase	NA	M1H502	Paramecium_bursaria_Chlorella_virus	33.0	2.6e-35
WP_000076661.1|2229745_2229952_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024127.1|2230104_2232513_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	41.0	4.9e-128
>prophage 173
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2241754	2244781	2825163	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_108932443.1|2241754_2243851_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.1	1.2e-117
WP_000455987.1|2244259_2244781_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 174
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2252664	2259048	2825163		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062658.1|2252664_2254404_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.3	2.7e-35
WP_000473675.1|2254704_2256771_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206033.1|2257150_2257561_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240662.1|2257602_2257947_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228162.1|2258079_2259048_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	5.2e-12
>prophage 175
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2268634	2269627	2825163		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161536.1|2268634_2269627_-	D-lactate dehydrogenase	NA	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	31.5	1.1e-36
>prophage 176
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2278907	2279603	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000382904.1|2278907_2279603_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.0	3.0e-38
>prophage 177
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2299982	2300849	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2299982_2300849_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 178
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2308651	2313832	2825163		Streptococcus_phage(50.0%)	3	NA	NA
WP_001795457.1|2308651_2310460_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	38.1	1.9e-95
WP_000755954.1|2310576_2310969_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000088722.1|2310970_2313832_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	2.4e-28
>prophage 179
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2320653	2321349	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000217466.1|2320653_2321349_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	36.5	8.6e-09
>prophage 180
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2326475	2327561	2825163	integrase	Clostridium_phage(100.0%)	1	2322078:2322092	2332696:2332710
2322078:2322092	attL	TGAAAAGTTGAATTT	NA	NA	NA	NA
WP_000868132.1|2326475_2327561_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_000868132.1|2326475_2327561_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
2332696:2332710	attR	TGAAAAGTTGAATTT	NA	NA	NA	NA
>prophage 181
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2330892	2331624	2825163		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|2330892_2331624_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 182
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2341281	2342839	2825163		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173869.1|2341281_2342097_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	1.8e-13
WP_000590516.1|2342089_2342839_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.4	5.3e-20
>prophage 183
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2349972	2354401	2825163		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923520.1|2349972_2350635_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.2	6.5e-22
WP_150014993.1|2350627_2351404_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026194.1|2351799_2352987_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700921.1|2353048_2354401_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
>prophage 184
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2358094	2359953	2825163		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948981.1|2358094_2359321_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|2359317_2359953_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 185
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2377679	2383865	2825163		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|2377679_2378822_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779358.1|2379089_2379476_+	flippase GtxA	NA	NA	NA	NA	NA
WP_000482650.1|2379608_2379716_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064838.1|2380343_2382107_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.9	1.5e-36
WP_000486494.1|2382131_2383865_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 186
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2387325	2393097	2825163		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000671751.1|2387325_2388441_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|2388451_2389144_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200948.1|2389154_2389622_+	QueT transporter family protein	NA	NA	NA	NA	NA
WP_000783428.1|2389673_2390651_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916713.1|2390652_2391600_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.1	1.2e-138
WP_000594519.1|2392167_2393097_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 187
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2401041	2401773	2825163		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|2401041_2401773_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 188
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2418423	2419983	2825163		Escherichia_phage(100.0%)	1	NA	NA
WP_000692645.1|2418423_2419983_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 189
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2441401	2442436	2825163		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|2441401_2442436_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 190
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2452295	2456192	2825163		Hokovirus(33.33%)	4	NA	NA
WP_108932436.1|2452295_2453669_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	1.3e-13
WP_000249497.1|2453661_2454336_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|2454471_2455527_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229911.1|2455526_2456192_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.2e-36
>prophage 191
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2460771	2461980	2825163		Salmonella_phage(100.0%)	1	NA	NA
WP_108932442.1|2460771_2461980_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	6.1e-34
>prophage 192
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2474101	2475001	2825163		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524836.1|2474101_2475001_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.2	4.2e-16
>prophage 193
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2482373	2482793	2825163		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|2482373_2482793_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 194
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2488486	2489368	2825163		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000730043.1|2488486_2489368_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	2.2e-62
>prophage 195
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2497246	2497882	2825163		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2497246_2497882_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 196
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2511308	2515427	2825163		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000739224.1|2511308_2512085_+	glucosaminidase domain-containing protein	NA	H9A0P7	Staphylococcus_phage	41.0	3.8e-37
WP_000684141.1|2512395_2513520_+	FAD-dependent monooxygenase	NA	A0A2K9L3K5	Tupanvirus	22.8	5.5e-13
WP_000417016.1|2513611_2514565_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	2.9e-31
WP_000737705.1|2514926_2515427_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 197
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2519343	2520147	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|2519343_2520147_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 198
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2539125	2539731	2825163		Pithovirus(100.0%)	1	NA	NA
WP_000913019.1|2539125_2539731_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.6	3.8e-13
>prophage 199
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2551815	2554983	2825163		Leptospira_phage(100.0%)	1	NA	NA
WP_000592303.1|2551815_2554983_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	6.2e-62
>prophage 200
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2578446	2580113	2825163		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389662.1|2578446_2579256_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	2.2e-19
WP_000155386.1|2579252_2580113_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 201
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2585542	2594772	2825163	protease	Vibrio_phage(33.33%)	9	NA	NA
WP_000402465.1|2585542_2586679_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2I7SAX5	Vibrio_phage	27.0	5.4e-08
WP_001549616.1|2586807_2588214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000655244.1|2588767_2588950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797632.1|2588931_2589171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000130150.1|2589403_2591068_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.7	4.0e-44
WP_000186134.1|2591104_2591809_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_001549607.1|2592172_2592598_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044363.1|2592891_2593707_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001044432.1|2593917_2594772_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	41.4	3.4e-07
>prophage 202
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2598148	2601243	2825163		Staphylococcus_phage(50.0%)	5	NA	NA
WP_001015500.1|2598148_2598997_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_001549596.1|2599216_2599342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333465.1|2599603_2600212_+	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
WP_001791678.1|2600304_2600466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549592.1|2600502_2601243_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.4	7.3e-14
>prophage 203
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2607564	2608977	2825163		Pandoravirus(100.0%)	1	NA	NA
WP_000169220.1|2607564_2608977_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	5.0e-48
>prophage 204
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2612937	2614500	2825163		Vibrio_phage(100.0%)	1	NA	NA
WP_000792334.1|2612937_2614500_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.2	1.2e-18
>prophage 205
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2626657	2627626	2825163		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989098.1|2626657_2627626_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 206
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2645155	2646064	2825163		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|2645155_2646064_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 207
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2649654	2657091	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001048287.1|2649654_2657091_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	23.5	3.4e-18
>prophage 208
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2663347	2666167	2825163		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334465.1|2663347_2665153_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.6	2.0e-97
WP_000908177.1|2665384_2666167_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.1	1.7e-08
>prophage 209
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2678830	2682662	2825163		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2678830_2679274_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2679394_2680105_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083311.1|2680419_2681082_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242318.1|2681360_2682662_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	2.7e-133
>prophage 210
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2690600	2692211	2825163		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2690600_2692211_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 211
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2700013	2707763	2825163		Bacillus_virus(25.0%)	9	NA	NA
WP_000273356.1|2700013_2700613_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|2700613_2701690_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248735.1|2701676_2702513_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000379888.1|2702596_2703643_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.6	7.5e-41
WP_000697334.1|2703639_2704059_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654185.1|2704165_2704690_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2704716_2705955_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2705982_2706612_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2706635_2707763_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 212
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2718167	2718563	2825163		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2718167_2718563_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 213
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2724733	2725381	2825163		Moumouvirus(100.0%)	1	NA	NA
WP_001187629.1|2724733_2725381_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	6.1e-09
>prophage 214
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2732581	2734102	2825163		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2732581_2734102_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 215
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2739789	2741817	2825163		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546584.1|2739789_2741817_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.1	5.6e-24
>prophage 216
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2746967	2750352	2825163		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2746967_2747330_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_031807621.1|2747679_2748681_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2748799_2749126_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|2749127_2749607_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041103.1|2749581_2750352_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	1.3e-21
>prophage 217
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2764036	2768760	2825163		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094576.1|2764036_2765566_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_000214557.1|2765595_2766600_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2766736_2766991_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047820.1|2766990_2768760_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.1	5.3e-63
>prophage 218
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2772520	2786366	2825163	tRNA	Moraxella_phage(16.67%)	13	NA	NA
WP_000159034.1|2772520_2773546_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.9	6.9e-63
WP_000106330.1|2773647_2775258_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	3.3e-19
WP_001790685.1|2775346_2775475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602074.1|2775619_2777548_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.4	2.4e-53
WP_001283612.1|2777800_2778436_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000266883.1|2778739_2779819_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581077.1|2779878_2780103_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2780310_2781561_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790330.1|2781743_2782694_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000141414.1|2782842_2784327_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	4.0e-19
WP_001253312.1|2784323_2785283_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_001790167.1|2785470_2785578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000688492.1|2785649_2786366_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 219
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2793467	2796945	2825163	terminase	uncultured_virus(50.0%)	4	NA	NA
WP_000917289.1|2793467_2793752_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240645.1|2793827_2795444_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000128898.1|2796145_2796358_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
WP_001293058.1|2796354_2796945_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	95.8	1.1e-97
>prophage 220
NZ_AP020313	Staphylococcus aureus strain KUH140046	2825163	2804416	2824693	2825163	integrase	Staphylococcus_phage(97.3%)	38	2807259:2807273	2816185:2816199
WP_000791407.1|2804416_2805472_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595324.1|2805493_2806510_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
2807259:2807273	attL	CTATCATTATCGAAT	NA	NA	NA	NA
WP_000857191.1|2807628_2808666_-|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
WP_000825947.1|2808724_2809189_-	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000705248.1|2809288_2809471_-	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000591749.1|2809674_2810016_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000759682.1|2810021_2810954_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_001031454.1|2810969_2811683_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_001801500.1|2811645_2811819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000854072.1|2811815_2812079_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001025404.1|2812094_2812310_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128907.1|2812298_2812628_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001148605.1|2812678_2813431_+	phage antirepressor KilAC domain-containing protein	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148862.1|2813446_2813644_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_000762521.1|2813630_2814011_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|2814065_2814389_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2814385_2814547_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2814641_2814944_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2814948_2815209_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2815217_2815481_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700555.1|2815489_2817433_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
2816185:2816199	attR	ATTCGATAATGATAG	NA	NA	NA	NA
WP_000138475.1|2817434_2818355_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_071665632.1|2818435_2819053_+	MBL fold metallo-hydrolase	NA	A0A0H3U2T4	Staphylococcus_phage	100.0	4.1e-87
WP_000934760.1|2819053_2819524_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	99.4	7.4e-81
WP_000148321.1|2819553_2820447_+	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.3	5.5e-141
WP_000338530.1|2820453_2820672_+	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000401960.1|2820680_2821085_+	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.9e-72
WP_000101288.1|2821097_2821466_+	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_000131370.1|2821469_2821712_+	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_001065094.1|2821726_2821975_+	DUF1024 family protein	NA	A0A075LYF1	Staphylococcus_phage	97.6	4.1e-38
WP_001066447.1|2821967_2822504_+	dUTP diphosphatase	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
WP_001282074.1|2822540_2822786_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_000195803.1|2822782_2822989_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592207.1|2822985_2823372_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000595265.1|2823368_2823518_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000265043.1|2823517_2823718_+	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000590122.1|2823745_2824162_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|2824393_2824693_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
>prophage 1
NZ_AP020314	Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence	34268	0	1820	34268		Staphylococcus_phage(100.0%)	2	NA	NA
WP_001838797.1|114_1407_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.6	1.0e-188
WP_000358995.1|1424_1820_+	thioredoxin-dependent arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
>prophage 2
NZ_AP020314	Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence	34268	4828	5455	34268		Bacillus_virus(100.0%)	1	NA	NA
WP_000593103.1|4828_5455_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.7	8.0e-22
>prophage 3
NZ_AP020314	Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence	34268	15486	25642	34268	transposase	Staphylococcus_phage(50.0%)	13	NA	NA
WP_000119690.1|15486_15834_+	helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	36.8	4.9e-13
WP_001791613.1|15990_16083_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000481279.1|16254_17226_-	oxidoreductase	NA	NA	NA	NA	NA
WP_000418035.1|17349_17769_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001106005.1|18760_19435_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	96.4	5.4e-125
WP_000889978.1|19705_19801_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001568510.1|19965_20631_+|transposase	IS6-like element IS257-2 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	91.6	5.9e-108
WP_001028144.1|21203_22643_-	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000393259.1|22643_23036_-	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001105984.1|23165_23840_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
WP_000616116.1|23980_24400_+	fosfomycin resistance bacillithiol transferase FosD	NA	Q2LI91	Bacillus_phage	58.5	4.5e-37
WP_000199401.1|24411_24858_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000583527.1|25033_25642_+	recombinase family protein	NA	I1ZBD6	Salisaeta_icosahedral_phage	31.1	3.7e-16
>prophage 4
NZ_AP020314	Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence	34268	31252	34011	34268	transposase,integrase	Enterobacteria_phage(50.0%)	3	NA	NA
WP_000690638.1|31252_31846_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.1	1.5e-41
WP_000790712.1|31817_33260_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_000164959.1|33252_34011_+	recombinase family protein	NA	A0A0A8WIK3	Clostridium_phage	29.3	7.2e-09
