The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	0	25591	2914567	protease,tail,portal,terminase,head,holin,capsid	Staphylococcus_phage(100.0%)	28	NA	NA
WP_000625088.1|0_1662_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025273.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	99.7	3.0e-219
WP_150013891.1|2848_3586_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	G4KNQ2	Staphylococcus_phage	99.6	5.2e-129
WP_000154559.1|3609_4755_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114226.1|5675_6080_+	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268738.1|6484_7126_+|tail	phage tail protein	tail	C8CH27	Staphylococcus_phage	100.0	2.5e-119
WP_094969686.1|7086_7392_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	93.2	1.5e-29
WP_001096355.1|7442_7793_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_150013894.1|8037_12549_+|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	87.2	0.0e+00
WP_117223133.1|12545_14030_+|tail	phage tail family protein	tail	A0A068A242	Staphylococcus_phage	99.4	6.4e-296
WP_150013897.1|14045_17828_+	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	97.2	0.0e+00
WP_001000058.1|17820_17973_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_001262621.1|18018_18306_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_000340977.1|18361_18736_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_025174055.1|19156_19930_+	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	4.0e-148
WP_011447039.1|20132_20309_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|20361_20469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|20520_20775_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|20786_21542_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000919350.1|21732_22224_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000727649.1|23303_23753_-	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000702263.1|24437_24788_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|24840_25101_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|25411_25591_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
>prophage 2
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	31200	33647	2914567		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000991306.1|31200_32097_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000645727.1|32097_32778_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763043.1|32774_33647_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
>prophage 3
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	39410	39812	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000205106.1|39410_39812_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
>prophage 4
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	44008	46035	2914567		Bacillus_virus(50.0%)	2	NA	NA
WP_000149686.1|44008_44569_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275729.1|44937_46035_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.9	6.7e-48
>prophage 5
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	50065	52349	2914567		Bacillus_virus(100.0%)	2	NA	NA
WP_000284436.1|50065_51535_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000040866.1|51527_52349_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
>prophage 6
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	56050	62817	2914567		Gordonia_phage(33.33%)	5	NA	NA
WP_150013900.1|56050_57346_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|57454_57757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272056.1|57928_58621_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|58617_60810_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774556.1|60813_62817_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
>prophage 7
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	69991	75020	2914567		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|69991_70939_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147865.1|71019_72381_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.6	1.4e-103
WP_000548781.1|72550_73081_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140172.1|73327_74398_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613738.1|74465_75020_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
>prophage 8
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	78472	78886	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001557448.1|78472_78886_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	38.3	6.7e-17
>prophage 9
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	83940	84570	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|83940_84570_+	two-component system response regulator VraR	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 10
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	100050	101787	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|100050_101787_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 11
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	119814	120537	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_000590809.1|119814_120537_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
>prophage 12
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	131134	131479	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290301.1|131134_131479_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
>prophage 13
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	141109	141850	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216874.1|141109_141850_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
>prophage 14
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	149634	153899	2914567		Staphylococcus_phage(100.0%)	4	NA	NA
WP_010922839.1|149634_150417_+	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000821658.1|150697_151417_+	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_000713847.1|151451_152180_+	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_001236362.1|153143_153899_+	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
>prophage 15
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	157948	223694	2914567	protease,tRNA	Staphylococcus_phage(95.74%)	60	NA	NA
WP_000206343.1|157948_158737_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
WP_000473596.1|160100_161036_+	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782463.1|161037_162021_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000543854.1|162390_163182_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000550252.1|163186_163660_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092778.1|164606_165188_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.2	4.8e-53
WP_001039427.1|166150_166858_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001039454.1|166982_167705_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001038872.1|167762_168482_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001038704.1|168602_169322_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_011447030.1|169270_169378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|169479_170199_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_001791797.1|170261_170396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000028669.1|170559_172116_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_000072627.1|172108_173338_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_001792025.1|174413_174515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|174637_174733_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_000414216.1|176087_176660_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_000627540.1|176760_177102_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000669024.1|177142_177769_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000070642.1|177843_178839_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_001838777.1|178919_179570_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	93.5	6.5e-51
WP_012840523.1|179873_180329_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_000348364.1|180487_181966_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_000778528.1|181970_182972_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000718107.1|182968_183226_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672013.1|183291_183765_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_001822900.1|183769_184516_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000109906.1|184893_186486_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933820.1|186857_188054_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000366163.1|188175_189084_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453306.1|189295_190129_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000623470.1|192125_192479_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_001200542.1|192475_192841_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091442.1|193096_193399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096495.1|193658_194372_+	transaldolase	NA	M1PR54	Cyanophage	35.3	9.4e-19
WP_001168903.1|194811_195447_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|195742_196186_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|196172_196616_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671057.1|196728_197199_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_000384171.1|197397_197622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|197897_198752_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989121.1|198838_200131_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|200130_200445_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261668.1|200967_202470_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000077358.1|202950_203994_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_000493887.1|204000_204633_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_001159037.1|204643_205825_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_001008549.1|205837_206302_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196362.1|206423_207425_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001790712.1|207536_207656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|207658_208486_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|209056_209458_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|209580_210144_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|210140_211094_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025067.1|211203_212385_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_001557386.1|212672_215090_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_000836461.1|215111_215423_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001050566.1|215748_222309_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000285020.1|222425_223694_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
>prophage 16
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	235099	240427	2914567		Staphylococcus_phage(50.0%)	3	NA	NA
WP_001091387.1|235099_235957_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_001048368.1|235985_236582_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118314.1|236602_240427_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 17
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	249167	250874	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862095.1|249167_250874_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.8	2.1e-274
>prophage 18
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	257478	260109	2914567	tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|257478_258741_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|258834_260109_-	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 19
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	263878	268011	2914567		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808849.1|263878_265483_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291420.1|265469_266627_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553924.1|266741_267188_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174284.1|267267_268011_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.4	1.7e-18
>prophage 20
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	287124	290322	2914567		Streptomyces_phage(100.0%)	1	NA	NA
WP_150013903.1|287124_290322_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.3	3.6e-134
>prophage 21
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	295255	297013	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232647.1|295255_297013_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 22
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	301897	310061	2914567		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|301897_302602_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_015445861.1|302601_304263_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000849428.1|304761_306249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038317.1|306542_309173_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114454.1|309188_310061_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.6e-42
>prophage 23
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	313976	325129	2914567	protease,tRNA	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|313976_314897_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|314989_315112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435143.1|315309_317247_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.8	5.0e-115
WP_000049145.1|317672_319166_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|319394_319922_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|319950_320151_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|320197_320554_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|320695_321304_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280022.1|321322_322252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|322256_322367_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127573.1|322414_323716_+	trigger factor	NA	NA	NA	NA	NA
WP_000472302.1|323866_325129_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
>prophage 24
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	334696	341343	2914567	tRNA,integrase	Catovirus(50.0%)	4	335668:335684	347898:347914
WP_000425353.1|334696_337327_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
335668:335684	attL	TTTAAAAGAACAAGATT	NA	NA	NA	NA
WP_001108346.1|337339_338611_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000261115.1|338880_339588_+	prepilin peptidase	NA	NA	NA	NA	NA
WP_000868132.1|340257_341343_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
347898:347914	attR	TTTAAAAGAACAAGATT	NA	NA	NA	NA
>prophage 25
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	344674	345406	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|344674_345406_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 26
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	353973	389586	2914567	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005768.1|353973_354978_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019178.1|354979_356005_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|356027_357167_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|357185_357446_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|357720_360000_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000595011.1|360202_362476_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000364542.1|362497_363016_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058587.1|363443_365633_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|365644_366097_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717809.1|366093_366969_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|367429_368692_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|368707_370474_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|370806_370935_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|370934_371708_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102729.1|371868_373143_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.4e-105
WP_000704122.1|373227_373650_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752909.1|373749_373932_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|373971_374118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985878.1|374354_375368_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409157.1|375679_376822_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000066097.1|376822_377941_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567017.1|378635_379304_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283312.1|379305_381783_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734075.1|382125_384756_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|384818_385079_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|385082_385511_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|385525_385834_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342258.1|386118_386757_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	3.2e-10
WP_000137774.1|386759_387683_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|387694_388963_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|388962_389586_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 27
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	396258	397479	2914567		Lactococcus_phage(100.0%)	1	NA	NA
WP_000542320.1|396258_397479_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	2.2e-52
>prophage 28
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	406265	412429	2914567		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|406265_406727_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_001557362.1|406731_408933_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.6e-32
WP_001282563.1|408989_409964_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|410008_410260_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368338.1|410605_412429_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 29
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	415923	419031	2914567		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|415923_417756_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|417891_419031_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 30
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	425501	426449	2914567		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|425501_426449_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 31
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	429502	443248	2914567	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_001030080.1|429502_430894_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001797828.1|431228_431852_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411298.1|431862_432681_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217257.1|432741_434559_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
WP_001283055.1|434782_435889_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624577.1|436019_436697_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683940.1|436699_437800_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_001062176.1|437913_439260_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924220.1|439269_440160_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001213908.1|440285_441071_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564315.1|441112_441976_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|441962_442373_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|442648_443248_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 32
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	449421	450045	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|449421_450045_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 33
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	455589	458401	2914567		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019691.1|455589_456936_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.2	1.7e-61
WP_000202188.1|456928_458401_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
>prophage 34
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	465901	472472	2914567		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|465901_467239_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|467231_467462_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183383.1|467439_468321_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.8	2.0e-10
WP_001124985.1|468752_469205_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942210.1|469220_470900_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291533.1|471050_472472_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 35
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	479301	480708	2914567		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|479301_480708_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 36
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	487133	488618	2914567		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|487133_488618_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 37
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	492145	586018	2914567	protease,tail,tRNA,portal,terminase,head,integrase,holin,capsid,plate	Staphylococcus_phage(75.0%)	113	499439:499456	545964:545981
WP_001171335.1|492145_493054_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.0	4.4e-05
WP_000365240.1|493135_493678_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|493782_494232_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|494280_495168_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|495245_495752_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|495843_496575_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368656.1|496567_497110_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|497102_497840_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|497972_498698_+	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987775.1|498678_500430_+	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
499439:499456	attL	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_001557355.1|500673_501600_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001558502.1|501592_503620_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	1.6e-116
WP_000264751.1|503662_504868_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_000191470.1|504993_505608_+	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	99.5	2.5e-105
WP_001795334.1|505604_505751_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
WP_000825949.1|505980_506565_-	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	99.5	9.0e-68
WP_000525004.1|506582_507044_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333631.1|507056_507371_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	99.0	3.7e-52
WP_001121027.1|507522_507759_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|507772_508549_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_001025401.1|508577_508823_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|508791_509157_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|509211_509427_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124194.1|509453_509717_+	helix-turn-helix domain-containing protein	NA	M1SVD9	Staphylococcus_phage	100.0	1.9e-46
WP_001285948.1|509729_509891_+	DUF1270 domain-containing protein	NA	A9CR58	Staphylococcus_phage	98.1	1.1e-20
WP_000174999.1|509969_510293_+	hypothetical protein	NA	A0A2I6PE70	Staphylococcus_phage	99.1	3.2e-51
WP_000985972.1|510307_510670_+	hypothetical protein	NA	B5WZM2	Staphylococcus_phage	100.0	8.3e-56
WP_000762552.1|510666_511833_+	DUF2800 domain-containing protein	NA	A0A2I6PEL9	Staphylococcus_phage	100.0	1.4e-221
WP_000645048.1|511858_512416_+	DUF2815 family protein	NA	A0A2I6PEP8	Staphylococcus_phage	100.0	1.8e-97
WP_001802096.1|512483_514436_+	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	100.0	0.0e+00
WP_086154326.1|514448_514634_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	98.4	2.1e-26
WP_150013909.1|514633_515035_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	99.2	1.1e-67
WP_000022736.1|515034_515289_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_078064221.1|515288_515537_+	hypothetical protein	NA	M9NTB1	Staphylococcus_phage	97.5	1.7e-39
WP_000693989.1|515550_515757_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_000695756.1|515759_516164_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
WP_000979209.1|516160_516508_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000144703.1|516504_516813_+	hypothetical protein	NA	Q6R826	Staphylococcus_virus	96.1	8.4e-49
WP_001065088.1|516805_517054_+	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	98.8	2.0e-37
WP_000185653.1|517046_517577_+	dUTP pyrophosphatase	NA	C8CH05	Staphylococcus_phage	100.0	1.7e-94
WP_000195803.1|517613_517820_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592205.1|517816_518203_+	hypothetical protein	NA	A0A0H3U465	Staphylococcus_phage	96.9	2.4e-61
WP_000595263.1|518199_518352_+	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_000265252.1|518419_518620_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000884870.1|518907_521355_+	virulence-associated E family protein	NA	A0A2I6PEP4	Staphylococcus_phage	100.0	0.0e+00
WP_072324141.1|521457_521562_-	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	97.1	2.1e-12
WP_000665203.1|521695_521986_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_001802078.1|521966_523334_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.8	2.3e-263
WP_000513699.1|523346_523784_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_000160689.1|523940_524255_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|524383_524689_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000153555.1|524678_526370_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_001100671.1|526374_527613_+|portal	phage portal protein	portal	A0A2K9VBP0	Staphylococcus_phage	99.8	2.6e-234
WP_000061862.1|527596_528370_+|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	98.4	3.0e-135
WP_001142738.1|528381_529545_+|capsid	phage major capsid protein	capsid	M9QQM0	Staphylococcus_phage	100.0	4.2e-218
WP_000050973.1|529613_529892_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_000395495.1|529903_530236_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	99.1	8.2e-58
WP_000110020.1|530232_530634_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|530634_531030_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807541.1|531064_531706_+|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	99.1	5.0e-120
WP_000169127.1|531797_532253_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|532310_532661_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|532702_532861_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_001003455.1|532874_539075_+|tail	phage tail tape measure protein	tail	M9QQM6	Staphylococcus_phage	99.4	0.0e+00
WP_001190533.1|539074_539899_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384474.1|539907_541491_+|tail	phage tail protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
WP_000179858.1|541490_541781_+	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
WP_000429558.1|541796_543707_+	minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
WP_000067127.1|543706_545173_+|plate	phage baseplate upper protein	plate	A0A2I6PES7	Staphylococcus_phage	100.0	1.5e-273
WP_001166599.1|545172_545562_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|545554_545719_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|545764_546064_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
545964:545981	attR	CTAAAAATATTAGAGACA	NA	NA	NA	NA
WP_000339146.1|546199_546502_+|holin	phage holin	holin	A0A2I6PET6	Staphylococcus_phage	100.0	7.0e-48
WP_000909213.1|546512_547967_+	N-acetylmuramoyl-L-alanine amidase	NA	U5U7D2	Staphylococcus_phage	100.0	2.6e-289
WP_000126131.1|548688_548904_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
WP_000476865.1|548993_549899_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476346.1|549956_550853_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001557351.1|550928_551183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000913243.1|551323_552280_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001186912.1|552681_553227_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151997.1|553332_553581_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163798.1|553688_554642_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000902099.1|554631_556011_+	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
WP_000069289.1|556163_557624_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_001792205.1|557748_557865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001174258.1|558025_559012_+	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_000681750.1|559126_560095_-	asparaginase	NA	NA	NA	NA	NA
WP_000644391.1|560171_560831_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_001795818.1|560861_561014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001800578.1|561094_561286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000133961.1|561542_562718_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000165530.1|562939_564250_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000161745.1|564266_565265_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001043863.1|565435_565708_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450555.1|566138_566711_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|566713_567439_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001096471.1|567440_568400_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|568491_568941_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|569149_569350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269921.1|569735_570902_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000776312.1|570927_571992_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_000253231.1|572001_573300_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000389524.1|573306_574551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000005212.1|574564_575140_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
WP_000154683.1|575129_575717_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_001827022.1|575788_576469_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000839926.1|576804_577122_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000690025.1|577365_578508_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000361540.1|578512_579715_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
WP_000049921.1|579701_580673_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|580696_583390_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858779.1|583711_585004_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000362218.1|585331_586018_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
>prophage 38
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	589758	590436	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_001795446.1|589758_590436_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.9e-24
>prophage 39
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	599710	600589	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_001133021.1|599710_600589_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 40
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	639432	648822	2914567		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000282171.1|639432_640137_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_031888515.1|640381_640576_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|640587_640839_+	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000404645.1|640876_642001_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|642016_642454_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934894.1|642877_643834_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|644033_644513_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166063.1|644527_645367_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	76.5	1.5e-47
WP_000159900.1|645452_645986_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913317.1|645978_646407_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473653.1|646418_646919_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|646918_647140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342131.1|647331_648822_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.2	2.3e-22
>prophage 41
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	652231	654243	2914567		Bacillus_phage(50.0%)	2	NA	NA
WP_000192137.1|652231_652891_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|652887_654243_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 42
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	660408	661200	2914567		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|660408_661200_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 43
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	664738	669769	2914567	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138415.1|664738_665875_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	9.7e-34
WP_001788788.1|665906_666536_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_001215907.1|666554_666824_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|666986_667295_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|667465_667666_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|667862_668264_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|668503_669769_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 44
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	677816	679418	2914567		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|677816_679418_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 45
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	684507	687961	2914567		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|684507_685359_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|685365_686007_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077571.1|686146_687961_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
>prophage 46
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	691375	692077	2914567		Tupanvirus(100.0%)	1	NA	NA
WP_000571259.1|691375_692077_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.0e-13
>prophage 47
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	700175	702530	2914567		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000153613.1|700175_700958_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	35.9	2.7e-27
WP_000173833.1|700959_701958_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000604813.1|701963_702530_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	31.6	1.5e-22
>prophage 48
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	706849	708112	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|706849_708112_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 49
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	717771	722165	2914567		Bacillus_phage(50.0%)	2	NA	NA
WP_150013915.1|717771_720174_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.2	5.1e-93
WP_001557340.1|720173_722165_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	1.0e-115
>prophage 50
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	728156	729803	2914567		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|728156_729803_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 51
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	733472	734594	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691301.1|733472_734594_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 52
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	738744	744400	2914567		Phage_Wrath(25.0%)	6	NA	NA
WP_001208755.1|738744_739368_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
WP_001797872.1|739747_740764_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	1.1e-15
WP_000688124.1|740785_741763_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.4	1.8e-185
WP_001085655.1|741919_742189_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|742642_742792_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_150013918.1|742882_744400_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.0	1.5e-90
>prophage 53
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	754538	758814	2914567		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|754538_755072_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|755210_755399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|755511_756114_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670307.1|756110_757202_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603970.1|757205_757937_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000593436.1|757905_758814_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 54
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	764473	767501	2914567		Staphylococcus_phage(100.0%)	5	NA	NA
WP_000006110.1|764473_764659_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|765082_765193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|765892_766099_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_001795785.1|766392_766617_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.5	5.0e-19
WP_001793526.1|767303_767501_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
>prophage 55
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	772570	773047	2914567		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|772570_773047_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 56
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	778989	785471	2914567		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|778989_779808_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|780282_780825_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516269.1|780830_782840_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_000073352.1|782852_785471_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 57
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	794885	795929	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|794885_795929_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 58
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	800127	805794	2914567		Bacillus_virus(33.33%)	4	NA	NA
WP_000664775.1|800127_801414_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	28.4	7.9e-16
WP_000089941.1|801413_802679_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_001293312.1|802709_803423_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000035746.1|803427_805794_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	7.3e-84
>prophage 59
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	810808	822621	2914567	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|810808_811780_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282298.1|811794_812712_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|812880_813231_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043635.1|813616_815734_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|815738_816056_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|816052_816337_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097460.1|816357_817533_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036633.1|817553_818021_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001801936.1|818310_822621_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 60
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	826894	827665	2914567		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473699.1|826894_827665_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 61
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	832444	846116	2914567	protease,tRNA	Erwinia_phage(16.67%)	11	NA	NA
WP_000379044.1|832444_833848_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	2.9e-27
WP_000072681.1|833913_834459_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015601.1|834455_835352_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	3.6e-31
WP_000195254.1|835769_837077_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001557331.1|837232_839308_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593194.1|839481_840354_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672869.1|840526_841771_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041666.1|841798_842917_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110248.1|843143_844052_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	5.0e-17
WP_001020801.1|844073_845240_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176393.1|845348_846116_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 62
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	859500	861750	2914567		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|859500_860232_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|860347_860581_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|861015_861750_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 63
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	872120	874115	2914567		Moumouvirus(100.0%)	1	NA	NA
WP_000579563.1|872120_874115_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 64
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	877262	878198	2914567	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161291.1|877262_878198_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 65
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	883210	885467	2914567		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|883210_884410_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|884625_884844_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368226.1|884843_885467_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	1.0e-21
>prophage 66
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	888781	889393	2914567		Pandoravirus(100.0%)	1	NA	NA
WP_001040248.1|888781_889393_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	1.6e-27
>prophage 67
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	893360	897971	2914567		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|893360_894461_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767028.1|894462_895737_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|895754_896636_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|896663_897971_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 68
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	902435	905189	2914567	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_150013924.1|902435_905189_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	27.9	1.8e-89
>prophage 69
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	924772	924961	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245796.1|924772_924961_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	2.5e-19
>prophage 70
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	933977	1021201	2914567	tail,tRNA,portal,terminase,head,transposase,holin,capsid,plate	Staphylococcus_phage(79.45%)	110	NA	NA
WP_150013927.1|933977_934202_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	7.3e-18
WP_150013931.1|934158_934305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857488.1|934977_935937_+	alpha-hemolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	7.4e-35
WP_001557163.1|936095_937415_-|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000231632.1|937933_938167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032817.1|938788_938974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000669537.1|939683_940034_-	complement inhibitor SCIN-B	NA	NA	NA	NA	NA
WP_000791581.1|940183_940681_-	complement convertase inhibitor Efb	NA	NA	NA	NA	NA
WP_000584398.1|940940_941447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000739564.1|942116_942518_+	formyl peptide receptor-like 1 inhibitory protein	NA	NA	NA	NA	NA
WP_000739210.1|942886_943216_-	complement convertase inhibitor Ecb	NA	NA	NA	NA	NA
WP_001791787.1|943409_943577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000049484.1|943704_944208_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_000659319.1|944200_944788_-	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_001039659.1|944799_945600_-	glutamate racemase	NA	NA	NA	NA	NA
WP_000139712.1|945835_946651_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_000818278.1|946650_948417_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_000079317.1|948468_949083_-	succinate dehydrogenase cytochrome b558 subunit	NA	NA	NA	NA	NA
WP_000390524.1|949406_951188_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_001788625.1|951353_951449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001018928.1|951511_951826_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249276.1|951998_954347_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.1	4.7e-14
WP_000161938.1|954356_956069_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
WP_000234068.1|956141_956663_-	CvpA family protein	NA	NA	NA	NA	NA
WP_000046704.1|956663_956930_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_001284282.1|957299_958238_+	ribonuclease HIII	NA	NA	NA	NA	NA
WP_000908969.1|958669_961072_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000003566.1|961071_962130_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
WP_000435374.1|962509_963250_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_001788617.1|963489_963597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000670950.1|963633_963957_-	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA	NA
WP_001242427.1|963975_964710_-	class B sortase	NA	NA	NA	NA	NA
WP_001548422.1|964771_965740_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_001220199.1|965749_966628_-	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA	NA
WP_001246685.1|966624_967701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000789821.1|967700_968384_-	heme uptake protein IsdC	NA	NA	NA	NA	NA
WP_000160859.1|968592_969645_+	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA	NA
WP_086154336.1|972517_973963_-	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	99.8	1.4e-295
WP_000354127.1|973943_974381_-|holin	phage holin	holin	Q8SDS8	Staphylococcus_phage	99.3	6.9e-73
WP_031790226.1|974436_974832_-	hypothetical protein	NA	A0A0E3XBL9	Staphylococcus_phage	98.5	1.4e-67
WP_086154335.1|974836_976075_-|plate	BppU family phage baseplate upper protein	plate	E0Y3M8	Staphylococcus_virus	99.3	1.9e-208
WP_086154334.1|976087_977962_-	glucosaminidase domain-containing protein	NA	A7VMY9	Staphylococcus_phage	99.7	0.0e+00
WP_000466769.1|978098_978398_-	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_001790193.1|978438_978612_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000705909.1|978615_978993_-	DUF2977 domain-containing protein	NA	A9CRC6	Staphylococcus_phage	100.0	5.6e-55
WP_086154333.1|978992_980816_-|plate	BppU family phage baseplate upper protein	plate	A0A0H4ISS3	Staphylococcus_phage	98.5	0.0e+00
WP_086154332.1|980815_982714_-	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	96.5	0.0e+00
WP_086154331.1|982726_984613_-|tail	phage tail protein	tail	W5RAP4	Staphylococcus_phage	99.4	0.0e+00
WP_000560199.1|984623_985559_-|tail	phage tail family protein	tail	A0A0H4J355	Staphylococcus_phage	100.0	4.8e-180
WP_086154330.1|985573_988543_-|terminase	terminase	terminase	Q4ZAG7	Staphylococcus_virus	93.8	2.7e-261
WP_000204079.1|988545_988887_-	hypothetical protein	NA	W5R8J4	Staphylococcus_phage	100.0	3.5e-56
WP_000141084.1|988907_989402_-	hypothetical protein	NA	A0A0H4IPX9	Staphylococcus_phage	100.0	2.5e-87
WP_000046067.1|989463_990024_-	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000270194.1|990010_990448_-	DUF3168 domain-containing protein	NA	A0A0H4J350	Staphylococcus_phage	100.0	7.9e-77
WP_001151336.1|990460_990874_-	HK97 gp10 family phage protein	NA	A0A0H4IPA6	Staphylococcus_phage	100.0	3.4e-77
WP_000482988.1|990860_991196_-|head	phage head closure protein	head	A0A0H4ISR6	Staphylococcus_phage	100.0	1.0e-60
WP_000338934.1|991188_991503_-|head,tail	phage head-tail connector protein	head,tail	A0A0H4IPX4	Staphylococcus_phage	100.0	2.6e-53
WP_000278802.1|991502_991829_-	Rho termination factor N-terminal domain-containing protein	NA	A0A0H4ITX8	Staphylococcus_phage	100.0	1.2e-50
WP_001135533.1|991845_992670_-|capsid	N4-gp56 family major capsid protein	capsid	A0A0H4J347	Staphylococcus_phage	100.0	4.3e-148
WP_000366936.1|992690_993287_-	phage scaffolding protein	NA	A0A0H4IP83	Staphylococcus_phage	100.0	5.7e-102
WP_044119665.1|993384_994365_-|head	phage head morphogenesis protein	head	Q4ZAW9	Staphylococcus_virus	98.8	6.6e-180
WP_001159669.1|994303_995782_-|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.6	4.3e-284
WP_001807202.1|995735_996944_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0H4ITX6	Staphylococcus_phage	100.0	1.0e-235
WP_000594085.1|996936_997431_-	hypothetical protein	NA	A0A0H4J343	Staphylococcus_phage	100.0	8.4e-83
WP_000286968.1|997781_998183_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_086154329.1|998183_998357_-	transcriptional regulator	NA	A9CR97	Staphylococcus_phage	98.2	7.5e-23
WP_001072797.1|998349_998553_-	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	100.0	5.2e-31
WP_000132920.1|998549_998744_-	hypothetical protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
WP_141767526.1|998740_998947_-	DUF1381 domain-containing protein	NA	A0A2I6PEM9	Staphylococcus_phage	95.6	8.7e-18
WP_086154327.1|998983_999517_-	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	99.4	3.5e-95
WP_001065023.1|999521_999758_-	DUF1024 family protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
WP_000979209.1|1000054_1000402_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_001668982.1|1000398_1000779_-	hypothetical protein	NA	A0A2K9VBT5	Staphylococcus_phage	100.0	8.4e-67
WP_000693989.1|1000781_1000988_-	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_001126839.1|1001001_1001250_-	hypothetical protein	NA	A0A1W6JPX8	Staphylococcus_phage	100.0	2.5e-43
WP_042907204.1|1001250_1001622_-	phage protein	NA	A0A1W6JPY5	Staphylococcus_phage	99.2	2.2e-51
WP_001187234.1|1001622_1001808_-	DUF3113 family protein	NA	A0A1W6JPY2	Staphylococcus_phage	100.0	8.3e-28
WP_000049804.1|1001812_1002217_-	DUF1064 domain-containing protein	NA	A0A1W6JPX0	Staphylococcus_phage	100.0	3.6e-68
WP_086154325.1|1002260_1002449_-	DUF3269 family protein	NA	Q4ZBL4	Staphylococcus_phage	100.0	3.4e-29
WP_000256589.1|1002461_1002620_-	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_001668921.1|1002613_1003393_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	99.6	1.9e-145
WP_001668920.1|1003402_1004140_-	conserved phage C-terminal domain-containing protein	NA	Q6R839	Staphylococcus_virus	81.8	2.1e-98
WP_000371250.1|1004203_1005061_+	DUF4393 domain-containing protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
WP_001199439.1|1005166_1005838_-	hypothetical protein	NA	A7TWM9	Staphylococcus_phage	100.0	2.0e-127
WP_000704705.1|1005850_1006402_-	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_001668918.1|1006430_1007219_-	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	99.6	5.7e-142
WP_000815401.1|1007211_1007433_-	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000291089.1|1007442_1007703_-	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_001668917.1|1007794_1007956_-	DUF1270 family protein	NA	Q4ZBM9	Staphylococcus_phage	98.1	1.9e-20
WP_086153461.1|1008135_1008783_+	hypothetical protein	NA	S4V9K2	Staphylococcus_phage	99.5	3.5e-113
WP_000939498.1|1008804_1008948_-	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000187184.1|1008987_1009212_-	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_070868489.1|1009212_1009980_-	phage antirepressor KilAC domain-containing protein	NA	B2ZYU5	Staphylococcus_phage	98.8	2.0e-139
WP_000394410.1|1010039_1010522_+	hypothetical protein	NA	A0A0N9BAX2	Staphylococcus_phage	100.0	1.1e-82
WP_000438352.1|1010622_1010802_-	hypothetical protein	NA	A0A0N9BAV3	Staphylococcus_phage	100.0	1.7e-25
WP_000282677.1|1010872_1011640_-	ParB N-terminal domain-containing protein	NA	Q4ZDB0	Staphylococcus_virus	100.0	2.3e-140
WP_000904049.1|1011632_1012514_-	ParB N-terminal domain-containing protein	NA	Q4ZDB2	Staphylococcus_virus	100.0	6.8e-152
WP_001113664.1|1012553_1012763_-	helix-turn-helix transcriptional regulator	NA	Q4ZDB3	Staphylococcus_virus	100.0	4.8e-32
WP_000455972.1|1012925_1013252_+	helix-turn-helix transcriptional regulator	NA	A0A059T5A2	Staphylococcus_phage	100.0	7.0e-54
WP_086154324.1|1013273_1013735_+	toxin	NA	Q4ZDB5	Staphylococcus_virus	98.0	1.3e-82
WP_000392109.1|1013766_1014447_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
WP_000861313.1|1014653_1016039_+	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000290472.1|1016155_1016329_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000872158.1|1016408_1016966_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000843611.1|1017092_1018232_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000401377.1|1018293_1018776_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|1018777_1019320_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|1019389_1019779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|1019781_1020036_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757575.1|1020274_1021201_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	2.2e-12
>prophage 71
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1032718	1034566	2914567		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|1032718_1034566_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 72
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1042697	1051530	2914567		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|1042697_1043792_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|1043804_1044344_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|1044487_1044763_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|1044930_1046337_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863439.1|1046340_1047633_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|1047723_1048701_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|1048704_1049817_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668336.1|1049987_1050614_-	YkyA family protein	NA	NA	NA	NA	NA
WP_000957037.1|1050978_1051530_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	1.6e-13
>prophage 73
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1057542	1061922	2914567		Bacillus_virus(50.0%)	5	NA	NA
WP_001289618.1|1057542_1057776_+	glutaredoxin-like protein NrdH	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040051.1|1058012_1059731_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|1059733_1060000_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505966.1|1060153_1060696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000685067.1|1060749_1061922_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
>prophage 74
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1065290	1080052	2914567		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921965.1|1065290_1066691_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|1066683_1067490_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101899.1|1067756_1069004_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709277.1|1069025_1070504_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
WP_000238669.1|1070518_1071085_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030811.1|1071087_1072116_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483720.1|1072108_1073593_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000032740.1|1073571_1075761_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000666806.1|1075753_1076425_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1076426_1076690_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1076689_1077394_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010413.1|1077397_1078522_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1078508_1078991_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225836.1|1079191_1080052_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	4.4e-39
>prophage 75
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1090505	1094252	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074537.1|1090505_1094252_+	glucosaminidase domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 76
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1097918	1098929	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000676537.1|1097918_1098929_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.2e-16
>prophage 77
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1107309	1110955	2914567		Enterococcus_phage(50.0%)	7	NA	NA
WP_000867357.1|1107309_1107525_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_001790177.1|1107588_1107720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001081351.1|1107765_1108725_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000766009.1|1109212_1109569_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001792054.1|1109657_1109795_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_001795266.1|1109935_1110226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000571167.1|1110313_1110955_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
>prophage 78
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1121149	1126360	2914567	protease	Pithovirus(33.33%)	3	NA	NA
WP_001838748.1|1121149_1123474_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|1123692_1124496_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049950.1|1124797_1126360_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
>prophage 79
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1145292	1147101	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082725.1|1145292_1147101_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
>prophage 80
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1152913	1154883	2914567		Bacillus_virus(100.0%)	2	NA	NA
WP_000427767.1|1152913_1153894_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.3e-15
WP_001067052.1|1153896_1154883_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	1.4e-15
>prophage 81
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1158534	1160548	2914567		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1158534_1159476_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140052.1|1159465_1160548_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 82
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1169139	1175949	2914567		Micromonas_sp._RCC1109_virus(33.33%)	4	NA	NA
WP_000619360.1|1169139_1170285_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
WP_001047069.1|1170394_1171264_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000353954.1|1171322_1173932_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044230.1|1174134_1175949_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
>prophage 83
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1182586	1186240	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000154921.1|1182586_1186240_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	2.0e-24
>prophage 84
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1196394	1203386	2914567		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185319.1|1196394_1197324_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
WP_000138487.1|1197660_1198905_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1199013_1200204_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838029.1|1200511_1201639_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1202000_1202378_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1202792_1203386_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 85
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1213306	1216934	2914567		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009692.1|1213306_1214782_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	4.5e-47
WP_000046076.1|1214912_1216121_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001143495.1|1216574_1216934_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.7e-14
>prophage 86
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1220977	1223646	2914567		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1220977_1222192_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129659.1|1222188_1223646_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	2.6e-39
>prophage 87
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1238331	1241854	2914567		environmental_halophage(50.0%)	3	NA	NA
WP_001006450.1|1238331_1239582_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_000205567.1|1239687_1240995_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1241092_1241854_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 88
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1245342	1246368	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571207.1|1245342_1246368_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
>prophage 89
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1249684	1254882	2914567		Streptococcus_phage(50.0%)	7	NA	NA
WP_000589549.1|1249684_1250041_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001147952.1|1250184_1250505_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422908.1|1250655_1251195_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150011.1|1251277_1251994_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000974460.1|1252141_1252564_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1252962_1253457_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001140693.1|1254300_1254882_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	5.5e-33
>prophage 90
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1258263	1259507	2914567		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1258263_1258464_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_000141557.1|1258820_1259507_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	1.7e-33
>prophage 91
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1268587	1290926	2914567	capsid,integrase	Staphylococcus_phage(46.67%)	23	1260626:1260640	1284307:1284321
1260626:1260640	attL	AGCCTACAACCACAT	NA	NA	NA	NA
WP_000757397.1|1268587_1269316_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_001058299.1|1269669_1269993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001035619.1|1271459_1272017_+	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	74.3	8.6e-68
WP_000282760.1|1272094_1272895_-	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	46.2	5.9e-54
WP_000801979.1|1274051_1275020_-	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
WP_000253083.1|1275448_1275940_-	hypothetical protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	39.9	3.0e-24
WP_000657544.1|1276117_1277176_-|capsid	phage capsid protein	capsid	A0A0K2CZ99	Paenibacillus_phage	26.6	3.6e-14
WP_000884055.1|1277162_1277369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001081426.1|1277593_1277938_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	5.5e-41
WP_086154319.1|1278625_1280998_-	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	39.1	1.8e-135
WP_001103961.1|1281090_1281390_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	66.7	5.9e-31
WP_001058501.1|1281390_1281615_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	61.8	8.9e-16
WP_000773731.1|1281607_1281754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000163544.1|1281765_1281984_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000583242.1|1282135_1282873_+	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	31.2	1.2e-05
WP_025175311.1|1282887_1283994_+|integrase	site-specific integrase	integrase	A0A1B2AQ00	Phage_Wrath	43.0	6.9e-77
WP_000586155.1|1284005_1284221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085183.1|1284776_1285241_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	98.7	1.6e-80
1284307:1284321	attR	ATGTGGTTGTAGGCT	NA	NA	NA	NA
WP_001050048.1|1285262_1287635_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.3e-92
WP_001165959.1|1287668_1288409_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1288524_1288758_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1288824_1289283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|1289621_1290926_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 92
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1300265	1306196	2914567		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1300265_1300853_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006549.1|1301416_1302361_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.3	5.4e-54
WP_001248939.1|1302471_1303467_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369721.1|1303463_1304375_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1305260_1306196_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 93
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1310643	1313490	2914567		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662676.1|1310643_1313490_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 94
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1316808	1317648	2914567		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753319.1|1316808_1317648_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 95
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1323726	1329432	2914567		Streptococcus_phage(66.67%)	5	NA	NA
WP_001557172.1|1323726_1324809_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	9.9e-44
WP_000686347.1|1325172_1326039_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|1326182_1326824_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258150.1|1326988_1328044_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1328361_1329432_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 96
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1338711	1362184	2914567		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|1338711_1339473_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|1339469_1340426_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1340412_1341384_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1341422_1341578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1341758_1342730_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855512.1|1342847_1344953_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
WP_000692521.1|1344915_1345314_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068501.1|1346114_1346981_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1347000_1347501_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1347841_1349347_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031760357.1|1349424_1349526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|1349616_1350534_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|1351412_1351955_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|1352293_1353352_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|1353591_1355106_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589248.1|1355098_1356076_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	7.1e-25
WP_000983677.1|1356297_1358079_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525106.1|1358090_1359974_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|1360243_1362184_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 97
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1365323	1375170	2914567		Pandoravirus(12.5%)	12	NA	NA
WP_001217796.1|1365323_1366475_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
WP_000604514.1|1366458_1367052_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|1367402_1368071_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1368072_1368492_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1368495_1369209_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|1369307_1369892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|1370171_1370612_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1370954_1371428_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1371402_1372089_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|1372088_1373144_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702778.1|1373215_1374199_-	lipoteichoic acid-specific glycosylation protein CsbB	NA	A0A192Y8W7	Salmonella_phage	43.3	1.1e-62
WP_000931238.1|1374330_1375170_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.5	9.6e-55
>prophage 98
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1386782	1388156	2914567		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952038.1|1386782_1388156_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.6	2.3e-45
>prophage 99
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1393133	1399413	2914567		Bacillus_phage(33.33%)	6	NA	NA
WP_000857598.1|1393133_1394807_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737148.1|1394803_1396435_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469894.1|1396653_1397529_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1397700_1398384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148826.1|1398386_1398845_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820897.1|1398846_1399413_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 100
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1406203	1406677	2914567		Pandoravirus(100.0%)	1	NA	NA
WP_000833486.1|1406203_1406677_-	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	39.4	1.6e-14
>prophage 101
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1411939	1412737	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1411939_1412737_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 102
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1417566	1418328	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1417566_1418328_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 103
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1422702	1423746	2914567		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030772.1|1422702_1423746_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 104
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1430269	1431067	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1430269_1431067_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 105
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1434292	1438251	2914567		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1434292_1436020_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793068.1|1436440_1437736_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1437852_1438251_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 106
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1445185	1445929	2914567		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|1445185_1445929_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 107
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1458467	1459028	2914567	integrase	Streptococcus_phage(100.0%)	1	1452621:1452635	1462618:1462632
1452621:1452635	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1458467_1459028_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1458467_1459028_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1462618:1462632	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 108
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1471856	1475210	2914567		Tupanvirus(50.0%)	3	NA	NA
WP_001200747.1|1471856_1472867_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.9e-33
WP_001792725.1|1473365_1473887_-	YwhD family protein	NA	NA	NA	NA	NA
WP_000180234.1|1473914_1475210_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 109
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1482782	1484105	2914567		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860592.1|1482782_1484105_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.8	2.6e-107
>prophage 110
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1495409	1496066	2914567		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_150013940.1|1495409_1496066_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	6.4e-46
>prophage 111
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1499707	1503028	2914567		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|1499707_1501084_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_000347061.1|1501627_1503028_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 112
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1526123	1526786	2914567		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|1526123_1526786_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 113
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1533369	1534557	2914567		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|1533369_1534557_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 114
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1537585	1548539	2914567		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1537585_1539667_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1539789_1540260_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1540325_1540739_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1540836_1541091_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_001788197.1|1541227_1544824_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1544987_1548539_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 115
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1552222	1557005	2914567	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1552222_1552771_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|1552783_1552966_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1553021_1553165_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872882.1|1553279_1553849_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664737.1|1553929_1554454_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|1554453_1555200_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1555207_1555612_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631969.1|1555604_1557005_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.8	1.2e-54
>prophage 116
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1563016	1565473	2914567	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1563016_1565473_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 117
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1579100	1589371	2914567	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1579100_1580588_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1580640_1580733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613722.1|1581126_1581603_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1581599_1581965_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167944.1|1581942_1582746_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	3.0e-21
WP_000057594.1|1582961_1583894_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148598.1|1584072_1584954_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|1585181_1587275_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1587531_1588071_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176709.1|1588075_1589371_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 118
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1598627	1601092	2914567		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1598627_1599593_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252543.1|1599739_1601092_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 119
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1606997	1610095	2914567	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051129.1|1606997_1608971_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	1.5e-93
WP_000279926.1|1609255_1610095_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 120
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1614001	1614619	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1614001_1614619_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 121
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1623758	1625456	2914567		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109040.1|1623758_1625456_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 122
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1642104	1648343	2914567		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1642104_1643109_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825530.1|1643440_1644283_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1644319_1644979_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569281.1|1644982_1646008_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	3.7e-32
WP_001036648.1|1646302_1647445_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634098.1|1647437_1648343_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
>prophage 123
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1674289	1677050	2914567		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072584.1|1674289_1675501_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
WP_000028663.1|1675493_1677050_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	1.2e-287
>prophage 124
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1689587	1695036	2914567	transposase	Paenibacillus_phage(25.0%)	5	NA	NA
WP_000159787.1|1689587_1689860_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041880.1|1690258_1690963_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.1	5.8e-29
WP_000551643.1|1691354_1691891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424963.1|1692003_1693545_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1693569_1695036_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 125
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1701778	1719301	2914567	integrase	Streptococcus_phage(100.0%)	20	1701527:1701540	1719313:1719326
1701527:1701540	attL	AATTTACTACTTAT	NA	NA	NA	NA
WP_000420682.1|1701778_1702093_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1702108_1702495_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|1702523_1703909_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|1703911_1704064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1704086_1705292_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1705334_1705556_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1705672_1706170_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1706144_1706651_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1706634_1709082_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804744.1|1709084_1711262_+	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	99.4	0.0e+00
WP_000769868.1|1711258_1712260_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|1712256_1713189_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|1713433_1713550_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691736.1|1713565_1715485_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_000336323.1|1715603_1715771_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|1715830_1716184_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|1716688_1717111_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|1717107_1717338_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|1717798_1718002_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|1718083_1719301_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
1719313:1719326	attR	AATTTACTACTTAT	NA	NA	NA	NA
>prophage 126
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1723554	1725078	2914567		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930511.1|1723554_1725078_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 127
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1733392	1739721	2914567		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|1733392_1733896_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1733916_1734213_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052484.1|1734456_1734648_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001218732.1|1734733_1735831_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157348.1|1735842_1736046_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373073.1|1736075_1736957_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_025175307.1|1737110_1737956_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	29.2	1.3e-11
WP_000655692.1|1738617_1739721_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
>prophage 128
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1749659	1750502	2914567		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209551.1|1749659_1750502_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	3.8e-11
>prophage 129
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1771809	1774544	2914567		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280799.1|1771809_1772832_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191954.1|1772809_1773754_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449069.1|1773743_1774544_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	5.8e-41
>prophage 130
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1792781	1793459	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911017.1|1792781_1793459_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.6e-31
>prophage 131
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1808108	1812548	2914567		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549295.1|1808108_1812548_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.6	6.3e-28
>prophage 132
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1823153	1824815	2914567		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570070.1|1823153_1823813_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736784.1|1823864_1824815_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 133
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1833613	1835050	2914567		Pandoravirus(100.0%)	1	NA	NA
WP_000164003.1|1833613_1835050_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.7	1.1e-29
>prophage 134
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1838810	1843349	2914567		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000950281.1|1838810_1840565_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	9.0e-63
WP_000608818.1|1840809_1841484_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975351.1|1841627_1843349_-	poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 135
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1852676	1853720	2914567		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|1852676_1853720_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 136
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1860934	1862464	2914567		Vibrio_phage(100.0%)	1	NA	NA
WP_000838205.1|1860934_1862464_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	50.7	4.5e-10
>prophage 137
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1871339	1872845	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008400.1|1871339_1872845_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 138
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1883790	1886040	2914567		Tetraselmis_virus(100.0%)	1	NA	NA
WP_000894660.1|1883790_1886040_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
>prophage 139
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1899360	1901420	2914567		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818915.1|1899360_1900458_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166920.1|1900841_1901420_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.1	9.7e-14
>prophage 140
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1909969	1913156	2914567		Planktothrix_phage(33.33%)	4	NA	NA
WP_000067352.1|1909969_1911562_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	4.1e-22
WP_000794565.1|1912071_1912269_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000739160.1|1912258_1912447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000960712.1|1912433_1913156_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
>prophage 141
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1917028	1917709	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|1917028_1917709_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 142
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1934515	1935700	2914567		Klosneuvirus(100.0%)	1	NA	NA
WP_001084442.1|1934515_1935700_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	2.0e-34
>prophage 143
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1940536	1950820	2914567		Tupanvirus(50.0%)	3	NA	NA
WP_000605281.1|1940536_1947712_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	29.7	4.5e-68
WP_000826862.1|1948158_1949409_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706135.1|1949794_1950820_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.5	8.5e-29
>prophage 144
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1954356	1957587	2914567		Bacillus_virus(50.0%)	4	NA	NA
WP_000590854.1|1954356_1955097_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.1	2.5e-38
WP_000171919.1|1955438_1955951_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1956129_1956333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013485.1|1956627_1957587_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 145
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1960928	1963413	2914567		Catovirus(50.0%)	2	NA	NA
WP_000723436.1|1960928_1962074_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	25.9	4.6e-23
WP_000779504.1|1962150_1963413_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	25.5	4.3e-22
>prophage 146
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1970248	1976813	2914567		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1970248_1971373_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028283.1|1971376_1972486_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459062.1|1972498_1973527_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940790.1|1973516_1975340_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000565304.1|1975359_1976124_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037332.1|1976126_1976813_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 147
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1980833	1982009	2914567		Clostridium_phage(100.0%)	1	NA	NA
WP_000469833.1|1980833_1982009_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	27.6	2.0e-29
>prophage 148
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1987448	1988222	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1987448_1988222_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 149
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	1996253	1996853	2914567		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1996253_1996853_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 150
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2001790	2006887	2914567		Catovirus(50.0%)	6	NA	NA
WP_001793242.1|2001790_2002771_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
WP_001789407.1|2002840_2002963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000183771.1|2003106_2003883_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_000414629.1|2004094_2004721_-	MFS transporter	NA	NA	NA	NA	NA
WP_001015549.1|2004916_2005681_-	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA	NA
WP_001223713.1|2005684_2006887_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.9e-09
>prophage 151
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2015153	2019363	2914567		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|2015153_2016134_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|2016364_2017357_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924990.1|2017372_2018368_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136633.1|2018364_2019363_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	5.2e-15
>prophage 152
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2052320	2053385	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816133.1|2052320_2053385_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.8	7.7e-09
>prophage 153
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2064073	2070727	2914567		Streptococcus_phage(50.0%)	4	NA	NA
WP_000852430.1|2064073_2066095_-	K(+)-transporting ATPase subunit B	NA	E4ZFI9	Streptococcus_phage	29.0	6.6e-41
WP_000029430.1|2066113_2067790_-	potassium-transporting ATPase subunit A	NA	NA	NA	NA	NA
WP_000631574.1|2067810_2067891_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_000446429.1|2068057_2070727_+	sensor histidine kinase KdpD	NA	A0A2K9L0Z8	Tupanvirus	21.5	6.0e-10
>prophage 154
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2078509	2084841	2914567	integrase	Bacillus_phage(66.67%)	7	2075078:2075092	2085156:2085170
2075078:2075092	attL	AGGATACTTTAAATC	NA	NA	NA	NA
WP_000815646.1|2078509_2079859_+	recombinase family protein	NA	Q9T200	Bacillus_phage	25.1	1.4e-18
WP_001186602.1|2079880_2081509_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	2.4e-46
WP_000859155.1|2082026_2082377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000700853.1|2082463_2082775_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001092169.1|2082792_2083299_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_061641403.1|2083319_2083637_+	RadC family protein	NA	NA	NA	NA	NA
WP_000868132.1|2083755_2084841_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
2085156:2085170	attR	GATTTAAAGTATCCT	NA	NA	NA	NA
>prophage 155
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2088172	2088904	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|2088172_2088904_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 156
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2102370	2103045	2914567	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001106057.1|2102370_2103045_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 157
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2107428	2108391	2914567	transposase	Streptococcus_phage(50.0%)	2	NA	NA
WP_001817892.1|2107428_2107626_+	protein rep	NA	A0A286QS97	Streptococcus_phage	62.0	1.2e-08
WP_001106057.1|2107716_2108391_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 158
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2114046	2124056	2914567		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|2114046_2114847_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104165.1|2115235_2116024_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_001060140.1|2116024_2117359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|2117351_2119178_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|2119190_2119892_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095328.1|2121094_2122378_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	1.8e-68
WP_000375647.1|2122655_2124056_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 159
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2130746	2139792	2914567	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884332.1|2130746_2132033_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.9	4.5e-88
WP_000177465.1|2132411_2133926_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.4	1.2e-90
WP_000449218.1|2134251_2135064_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819070.1|2135151_2137821_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	36.0	5.5e-120
WP_000255578.1|2137857_2139792_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 160
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2149893	2156450	2914567		Faecalibacterium_phage(25.0%)	8	NA	NA
WP_000742837.1|2149893_2150733_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2151183_2151537_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|2151604_2152000_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054128.1|2152259_2152829_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2152946_2153147_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000672035.1|2153538_2153730_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_000143647.1|2153821_2155702_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154162.1|2155691_2156450_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 161
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2170692	2172405	2914567		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138654.1|2170692_2172405_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 162
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2178033	2179047	2914567		Faustovirus(100.0%)	1	NA	NA
WP_000639184.1|2178033_2179047_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	25.9	9.6e-09
>prophage 163
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2191386	2192079	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|2191386_2192079_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 164
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2218177	2220037	2914567		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125628.1|2218177_2220037_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 165
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2245595	2247346	2914567		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143425.1|2245595_2246483_+	nisin susceptibility-associated two-component system sensor histidine kinase NsaS	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2246590_2247346_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 166
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2250766	2251264	2914567		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2250766_2251264_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 167
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2256258	2258642	2914567		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071727.1|2256258_2258109_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	1.6e-235
WP_000173331.1|2258105_2258642_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 168
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2263520	2273634	2914567	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|2263520_2265230_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|2265507_2265720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001028775.1|2265999_2266443_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172341.1|2266636_2268235_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001791980.1|2268294_2268624_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|2268919_2270416_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031409.1|2270609_2271500_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237629.1|2271622_2272039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_150013961.1|2272296_2273634_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.8e-18
>prophage 169
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2303967	2307763	2914567		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751263.1|2303967_2304669_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	5.2e-38
WP_000996739.1|2304950_2305439_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|2305951_2307763_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 170
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2316197	2320439	2914567		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161369.1|2316197_2317196_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	1.0e-34
WP_000076661.1|2317286_2317493_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024139.1|2318030_2320439_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.8	3.2e-127
>prophage 171
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2329682	2332718	2914567	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058993.1|2329682_2331788_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455988.1|2332196_2332718_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 172
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2339144	2345528	2914567		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062663.1|2339144_2340884_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473678.1|2341184_2343251_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206031.1|2343630_2344041_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240663.1|2344082_2344439_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228167.1|2344559_2345528_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	4.0e-12
>prophage 173
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2354817	2355810	2914567		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161545.1|2354817_2355810_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.7	3.7e-37
>prophage 174
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2365088	2365784	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000538625.1|2365088_2365784_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	3.0e-38
>prophage 175
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2386180	2387047	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2386180_2387047_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 176
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2395616	2397425	2914567		Streptococcus_phage(100.0%)	1	NA	NA
WP_001835549.1|2395616_2397425_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.3	3.9e-93
>prophage 177
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2408654	2409350	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000217456.1|2408654_2409350_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 178
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2413904	2414723	2914567		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824948.1|2413904_2414723_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	27.2	1.3e-08
>prophage 179
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2422775	2424333	2914567		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173871.1|2422775_2423591_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	8.8e-13
WP_000598772.1|2423583_2424333_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	9.0e-20
>prophage 180
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2431604	2436033	2914567		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923526.1|2431604_2432267_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.8	5.5e-21
WP_000072149.1|2432259_2433036_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026189.1|2433431_2434619_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700924.1|2434725_2436033_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.4e-12
>prophage 181
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2439427	2441286	2914567		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948974.1|2439427_2440654_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|2440650_2441286_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 182
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2459014	2465276	2914567		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|2459014_2460157_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779360.1|2460424_2460811_+	flippase GtxA	NA	NA	NA	NA	NA
WP_000482652.1|2460944_2461052_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064825.1|2461754_2463518_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	2.5e-36
WP_000486487.1|2463542_2465276_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 183
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2468737	2474508	2914567		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971550.1|2468737_2469853_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|2469863_2470556_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200956.1|2470566_2471034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000783428.1|2471085_2472063_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916704.1|2472064_2473012_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000594519.1|2473578_2474508_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 184
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2482520	2483252	2914567		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|2482520_2483252_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 185
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2499901	2501461	2914567		Escherichia_phage(100.0%)	1	NA	NA
WP_000692648.1|2499901_2501461_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 186
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2522789	2523824	2914567		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|2522789_2523824_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 187
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2533669	2537566	2914567		Hokovirus(33.33%)	4	NA	NA
WP_000477338.1|2533669_2535043_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	2.3e-13
WP_000249497.1|2535035_2535710_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|2535845_2536901_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229920.1|2536900_2537566_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.6e-36
>prophage 188
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2541305	2542514	2914567		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2541305_2542514_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 189
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2554604	2555504	2914567		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524830.1|2554604_2555504_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	1.2e-15
>prophage 190
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2562861	2563281	2914567		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|2562861_2563281_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 191
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2568913	2569795	2914567		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000235289.1|2568913_2569795_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	3.8e-62
>prophage 192
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2577673	2578309	2914567		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2577673_2578309_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 193
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2591114	2595232	2914567		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000739224.1|2591114_2591891_+	glucosaminidase domain-containing protein	NA	H9A0P7	Staphylococcus_phage	41.0	3.8e-37
WP_000684147.1|2592201_2593326_+	FAD-dependent monooxygenase	NA	A0A2K9L3K5	Tupanvirus	22.8	9.3e-13
WP_000417018.1|2593417_2594371_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	6.4e-31
WP_000737705.1|2594731_2595232_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 194
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2599149	2599953	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|2599149_2599953_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 195
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2618933	2619539	2914567		Pithovirus(100.0%)	1	NA	NA
WP_000913024.1|2618933_2619539_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.1	4.3e-12
>prophage 196
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2631509	2634677	2914567		Leptospira_phage(100.0%)	1	NA	NA
WP_000592307.1|2631509_2634677_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	1.1e-61
>prophage 197
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2658360	2660027	2914567		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389658.1|2658360_2659170_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	1.7e-19
WP_000155386.1|2659166_2660027_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 198
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2668811	2676468	2914567		Enterobacteria_phage(33.33%)	7	NA	NA
WP_000411031.1|2668811_2669828_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	29.7	1.0e-18
WP_000655241.1|2670401_2670584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000130149.1|2671077_2672742_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000186134.1|2672778_2673483_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000769705.1|2673866_2674292_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044362.1|2674587_2675403_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001044441.1|2675613_2676468_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	4.9e-06
>prophage 199
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2679850	2682160	2914567		Staphylococcus_phage(50.0%)	4	NA	NA
WP_001015500.1|2679850_2680699_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_000875476.1|2680931_2681135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001791678.1|2681221_2681383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001557494.1|2681419_2682160_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.5e-14
>prophage 200
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2688480	2689893	2914567		Pandoravirus(100.0%)	1	NA	NA
WP_000169224.1|2688480_2689893_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 201
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2693856	2695419	2914567		Vibrio_phage(100.0%)	1	NA	NA
WP_000792342.1|2693856_2695419_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 202
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2705621	2706590	2914567		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|2705621_2706590_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 203
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2722355	2723264	2914567		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|2722355_2723264_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 204
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2740557	2743377	2914567		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334463.1|2740557_2742363_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
WP_000908182.1|2742594_2743377_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
>prophage 205
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2754557	2758388	2914567		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2754557_2755001_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2755121_2755832_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_150013977.1|2756145_2756808_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242311.1|2757086_2758388_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 206
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2766328	2767939	2914567		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2766328_2767939_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 207
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2775742	2783492	2914567		Bacillus_virus(25.0%)	9	NA	NA
WP_000273358.1|2775742_2776342_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|2776342_2777419_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248732.1|2777405_2778242_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000379895.1|2778325_2779372_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.3	2.2e-40
WP_000697334.1|2779368_2779788_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654184.1|2779894_2780419_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120492.1|2780445_2781684_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.2	4.8e-103
WP_000048712.1|2781711_2782341_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2782364_2783492_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 208
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2793896	2794292	2914567		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2793896_2794292_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 209
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2800463	2801111	2914567		Moumouvirus(100.0%)	1	NA	NA
WP_001187630.1|2800463_2801111_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	8.0e-09
>prophage 210
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2808311	2809832	2914567		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2808311_2809832_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 211
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2817023	2819051	2914567		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546611.1|2817023_2819051_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.5	2.3e-25
>prophage 212
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2824200	2827584	2914567		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2824200_2824563_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390829.1|2824911_2825913_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2826031_2826358_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|2826359_2826839_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041111.1|2826813_2827584_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	2.2e-21
>prophage 213
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2841446	2846169	2914567		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094583.1|2841446_2842976_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_168285279.1|2842989_2844024_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|2844145_2844400_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_150013980.1|2844399_2846169_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.6	1.2e-62
>prophage 214
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2849929	2863990	2914567	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_000159041.1|2849929_2850955_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.6	3.4e-62
WP_000106332.1|2851269_2852880_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	28.1	1.9e-19
WP_001792272.1|2852968_2853097_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602057.1|2853241_2855170_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.2	9.3e-53
WP_001283612.1|2855422_2856058_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000266884.1|2856361_2857441_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581076.1|2857500_2857725_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2857932_2859183_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790331.1|2859365_2860316_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000141432.1|2860464_2861949_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.5	2.3e-19
WP_001253312.1|2861945_2862905_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688492.1|2863273_2863990_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 215
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2871159	2883504	2914567	terminase,coat,integrase	Staphylococcus_phage(88.24%)	18	2873119:2873138	2889199:2889218
WP_000917289.1|2871159_2871444_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240642.1|2871519_2873136_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
2873119:2873138	attL	ATGCCGGGAATGATGTAAAA	NA	NA	NA	NA
WP_000179353.1|2873204_2874377_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	97.9	1.7e-219
WP_000672427.1|2874390_2875113_-	helix-turn-helix transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	38.2	3.3e-35
WP_000794657.1|2875265_2875472_+	helix-turn-helix transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	71.6	6.4e-21
WP_000481968.1|2875475_2875793_+	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	95.2	5.1e-49
WP_000708434.1|2875789_2875936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001103933.1|2876141_2876459_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	48.1	1.2e-18
WP_001002699.1|2876525_2877395_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	96.5	1.6e-161
WP_150013983.1|2877411_2878881_+	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	99.2	2.2e-288
WP_001039169.1|2879166_2879529_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	98.3	5.8e-65
WP_000998179.1|2879530_2879815_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	100.0	1.2e-49
WP_001019811.1|2879811_2880453_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.1	2.2e-107
WP_000443639.1|2880988_2881330_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	6.4e-58
WP_029625649.1|2881360_2882014_+	hypothetical protein	NA	Q4ZE82	Staphylococcus_phage	99.1	1.7e-115
WP_000771366.1|2882066_2882594_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	96.0	1.6e-87
WP_045181470.1|2882725_2882938_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_001293073.1|2882934_2883504_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.4	3.5e-101
2889199:2889218	attR	ATGCCGGGAATGATGTAAAA	NA	NA	NA	NA
>prophage 216
NZ_AP020324	Staphylococcus aureus strain KUN1163	2914567	2893165	2914096	2914567	integrase	Staphylococcus_phage(97.22%)	38	2884678:2884692	2897666:2897680
2884678:2884692	attL	TTGAAAATGTTGATA	NA	NA	NA	NA
WP_000791411.1|2893165_2894221_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595392.1|2894242_2895259_+	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000857180.1|2896377_2897415_-|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	98.6	1.4e-175
WP_000427213.1|2897477_2897720_-	hypothetical protein	NA	NA	NA	NA	NA
2897666:2897680	attR	TATCAACATTTTCAA	NA	NA	NA	NA
WP_001558608.1|2897730_2898714_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000694772.1|2898813_2898996_-	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_000591749.1|2899199_2899541_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_150013986.1|2899546_2900479_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	99.7	1.3e-172
WP_001031454.1|2900494_2901208_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000854072.1|2901341_2901605_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001025404.1|2901620_2901836_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128909.1|2901824_2902154_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	98.2	5.1e-52
WP_001148605.1|2902204_2902957_+	phage antirepressor KilAC domain-containing protein	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_001148856.1|2902972_2903170_+	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_000762521.1|2903156_2903537_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|2903591_2903915_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|2903911_2904073_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2904167_2904470_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|2904474_2904735_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|2904743_2905007_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700555.1|2905015_2906959_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	100.0	0.0e+00
WP_000138478.1|2906960_2907881_+	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	99.7	8.6e-166
WP_072460574.1|2907961_2908579_+	MBL fold metallo-hydrolase	NA	A0A1W6JPL3	Staphylococcus_phage	100.0	1.2e-86
WP_000934759.1|2908579_2909050_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_000148333.1|2909079_2909973_+	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000338528.1|2909979_2910198_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401969.1|2910206_2910611_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000101279.1|2910623_2910995_+	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000111491.1|2910994_2911252_+	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000178987.1|2911248_2911497_+	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_001065108.1|2911511_2911757_+	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000185693.1|2911753_2912290_+	dUTP diphosphatase	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001282077.1|2912326_2912572_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000195784.1|2912568_2912775_+	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_000595265.1|2912771_2912921_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_001557462.1|2912920_2913121_+	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000590122.1|2913148_2913565_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988332.1|2913796_2914096_+	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
