assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008370715.1_ASM837071v1	NZ_CP034725	Pseudomonas brassicacearum strain 3Re2-7 chromosome, complete genome	1	639846-639941	1	CRISPRCasFinder	no		PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	Orphan	ACCGGGAGAACCAGGTCGGCTGT	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	NA|120aa|up_0|NZ_CP034725.1_639431_639791_+,NA|587aa|down_8|NZ_CP034725.1_650867_652628_-	NA|297aa|up_9|NZ_CP034725.1_628552_629443_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|427aa|up_8|NZ_CP034725.1_629465_630746_+	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	NA|480aa|up_7|NZ_CP034725.1_630784_632224_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|630aa|up_6|NZ_CP034725.1_632679_634569_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|431aa|up_5|NZ_CP034725.1_634740_636033_+	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX	NA|249aa|up_4|NZ_CP034725.1_636001_636748_-	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|206aa|up_3|NZ_CP034725.1_636962_637580_+	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional	NA|151aa|up_2|NZ_CP034725.1_637570_638023_+	COG3151, COG3151, Uncharacterized protein conserved in bacteria [Function unknown]	NA|272aa|up_1|NZ_CP034725.1_638122_638938_+	PRK11148, PRK11148, cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional	NA|120aa|up_0|NZ_CP034725.1_639431_639791_+	NA	NA|203aa|down_0|NZ_CP034725.1_640384_640993_+	COG3150, COG3150, Predicted esterase [General function prediction only]	NA|635aa|down_1|NZ_CP034725.1_641035_642940_+	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|329aa|down_2|NZ_CP034725.1_642939_643926_+	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|174aa|down_3|NZ_CP034725.1_643922_644444_+	COG3577, COG3577, Predicted aspartyl protease [General function prediction only]	NA|755aa|down_4|NZ_CP034725.1_644454_646719_+	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|235aa|down_5|NZ_CP034725.1_646898_647603_+	pfam03886, ABC_trans_aux, ABC-type transport auxiliary lipoprotein component	NA|506aa|down_6|NZ_CP034725.1_647840_649358_-	COG3726, AhpA, Uncharacterized membrane protein affecting hemolysin expression [General function prediction only]	NA|405aa|down_7|NZ_CP034725.1_649491_650706_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|587aa|down_8|NZ_CP034725.1_650867_652628_-	NA	NA|287aa|down_9|NZ_CP034725.1_652825_653686_-	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed
GCF_008370715.1_ASM837071v1	NZ_CP034725	Pseudomonas brassicacearum strain 3Re2-7 chromosome, complete genome	2	1217247-1217379	2	CRISPRCasFinder	no		PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	Orphan	TGTGGGAGCAAAGCTTGCTCGCGAGGCGGCCTGACAGCCGGCCTG	45	1	2	1217292-1217334|1217292-1217334	NZ_CP034725.1_1035090-1035132|NZ_CP034725.1_6280754-6280796	NA	1	1	Orphan	PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	NA,NA	NA|84aa|up_9|NZ_CP034725.1_1208138_1208390_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|179aa|up_8|NZ_CP034725.1_1208395_1208932_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|251aa|up_7|NZ_CP034725.1_1208934_1209687_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|up_6|NZ_CP034725.1_1209732_1210083_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|299aa|up_5|NZ_CP034725.1_1210215_1211112_+	PRK00283, xerD, tyrosine recombinase	NA|244aa|up_4|NZ_CP034725.1_1211397_1212129_+	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional	NA|435aa|up_3|NZ_CP034725.1_1212261_1213566_+	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|470aa|up_2|NZ_CP034725.1_1213671_1215081_+	PRK09225, PRK09225, threonine synthase; Validated	NA|457aa|up_1|NZ_CP034725.1_1215201_1216572_+	cd13707, PBP2_BvgS_D2, The second of the two tandem periplasmic domains of sensor-kinase BvgS; the type 2 peripasmic-binding fold protein	NA|96aa|up_0|NZ_CP034725.1_1216756_1217044_+	pfam12021, DUF3509, Protein of unknown function (DUF3509)	NA|400aa|down_0|NZ_CP034725.1_1217527_1218727_-	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|181aa|down_1|NZ_CP034725.1_1218874_1219417_+	pfam07152, YaeQ, YaeQ protein	NA|570aa|down_2|NZ_CP034725.1_1219506_1221216_+	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|369aa|down_3|NZ_CP034725.1_1221463_1222570_+	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain	NA|543aa|down_4|NZ_CP034725.1_1222772_1224401_-	PRK13273, mdoD, glucan biosynthesis protein D; Provisional	NA|62aa|down_5|NZ_CP034725.1_1224762_1224948_+	cd16439, beta_Kdo_transferase_KpsC_2, beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC, repeat 2	NA|100aa|down_6|NZ_CP034725.1_1224993_1225293_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|88aa|down_7|NZ_CP034725.1_1225255_1225519_-	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|475aa|down_8|NZ_CP034725.1_1225665_1227090_-	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase	NA|273aa|down_9|NZ_CP034725.1_1227237_1228056_-	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]
GCF_008370715.1_ASM837071v1	NZ_CP034725	Pseudomonas brassicacearum strain 3Re2-7 chromosome, complete genome	3	3478936-3479031	3	CRISPRCasFinder	no		PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	Orphan	CGACCTGGCTCTCCCGGTCGTAC	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	NA,NA|134aa|down_0|NZ_CP034725.1_3479245_3479647_+	NA|254aa|up_9|NZ_CP034725.1_3468640_3469402_-	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|555aa|up_8|NZ_CP034725.1_3469418_3471083_-	cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|492aa|up_7|NZ_CP034725.1_3471344_3472820_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|98aa|up_6|NZ_CP034725.1_3472869_3473163_-	pfam07578, LAB_N, Lipid A Biosynthesis N-terminal domain	NA|248aa|up_5|NZ_CP034725.1_3473164_3473908_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|324aa|up_4|NZ_CP034725.1_3473941_3474913_-	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|339aa|up_3|NZ_CP034725.1_3475234_3476251_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|448aa|up_2|NZ_CP034725.1_3476262_3477606_-	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|188aa|up_1|NZ_CP034725.1_3477727_3478291_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|160aa|up_0|NZ_CP034725.1_3478327_3478807_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|134aa|down_0|NZ_CP034725.1_3479245_3479647_+	NA	NA|808aa|down_1|NZ_CP034725.1_3479683_3482107_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|315aa|down_2|NZ_CP034725.1_3482174_3483119_-	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|170aa|down_3|NZ_CP034725.1_3483118_3483628_-	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|174aa|down_4|NZ_CP034725.1_3483919_3484441_-	COG4875, COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown]	NA|395aa|down_5|NZ_CP034725.1_3484614_3485799_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|down_6|NZ_CP034725.1_3485795_3486464_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|773aa|down_7|NZ_CP034725.1_3486454_3488773_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|156aa|down_8|NZ_CP034725.1_3488769_3489237_+	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|299aa|down_9|NZ_CP034725.1_3489269_3490166_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]
GCF_008370715.1_ASM837071v1	NZ_CP034725	Pseudomonas brassicacearum strain 3Re2-7 chromosome, complete genome	4	3813545-3813639	4	CRISPRCasFinder	no		PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	Orphan	CTGTGGGAGCGAGCTTGCTCGCGA	24	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,DinG,csa3,cas3,RT,WYL	NA|110aa|up_4|NZ_CP034725.1_3809058_3809388_-,NA	NA|371aa|up_9|NZ_CP034725.1_3802627_3803740_-	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|339aa|up_8|NZ_CP034725.1_3803739_3804756_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|326aa|up_7|NZ_CP034725.1_3804792_3805770_-	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|358aa|up_6|NZ_CP034725.1_3805772_3806846_-	COG3199, COG3199, Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]	NA|622aa|up_5|NZ_CP034725.1_3807188_3809054_+	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|110aa|up_4|NZ_CP034725.1_3809058_3809388_-	NA	NA|404aa|up_3|NZ_CP034725.1_3809610_3810822_-	cd03012, TlpA_like_DipZ_like, TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain	NA|88aa|up_2|NZ_CP034725.1_3811001_3811265_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|247aa|up_1|NZ_CP034725.1_3811488_3812229_+	PRK09468, ompR, osmolarity response regulator; Provisional	NA|437aa|up_0|NZ_CP034725.1_3812225_3813536_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|214aa|down_0|NZ_CP034725.1_3813883_3814525_+	COG2717, COG2717, Predicted membrane protein [Function unknown]	NA|600aa|down_1|NZ_CP034725.1_3814668_3816468_+	PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional	NA|227aa|down_2|NZ_CP034725.1_3816479_3817160_+	pfam09997, DUF2238, Predicted membrane protein (DUF2238)	NA|858aa|down_3|NZ_CP034725.1_3817273_3819847_+	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|4189aa|down_4|NZ_CP034725.1_3819995_3832562_-	pfam12545, DUF3739, Filamentous haemagglutinin family outer membrane protein	NA|397aa|down_5|NZ_CP034725.1_3832773_3833964_-	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily	NA|404aa|down_6|NZ_CP034725.1_3834392_3835604_-	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|473aa|down_7|NZ_CP034725.1_3835603_3837022_-	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|787aa|down_8|NZ_CP034725.1_3837021_3839382_-	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|193aa|down_9|NZ_CP034725.1_3839378_3839957_-	pfam04612, T2SSM, Type II secretion system (T2SS), protein M
