assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	1	737691-737785	1	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	AAAAGCCTAAAGCTTAAAGCCTACTGCGTAAAGCA	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA,NA|132aa|down_3|NZ_CP043612.1_743066_743462_-,NA|385aa|down_5|NZ_CP043612.1_743799_744954_+,NA|366aa|down_6|NZ_CP043612.1_745298_746396_+,NA|255aa|down_7|NZ_CP043612.1_747495_748260_+,NA|270aa|down_8|NZ_CP043612.1_748391_749201_+,NA|218aa|down_9|NZ_CP043612.1_749426_750080_+	NA|465aa|up_9|NZ_CP043612.1_725000_726395_-	TIGR03525, lipoprotein_putative, gliding motility-associated lipoprotein GldK	NA|384aa|up_8|NZ_CP043612.1_726657_727809_-	cd09988, Formimidoylglutamase, Formimidoylglutamase or HutE	NA|843aa|up_7|NZ_CP043612.1_727817_730346_-	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|482aa|up_6|NZ_CP043612.1_730717_732163_+	PRK14329, PRK14329, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|124aa|up_5|NZ_CP043612.1_732250_732622_+	TIGR04256, conserved_hypothetical_protein, GxxExxY protein	NA|420aa|up_4|NZ_CP043612.1_732752_734012_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|168aa|up_3|NZ_CP043612.1_734112_734616_+	pfam04390, LptE, Lipopolysaccharide-assembly	NA|115aa|up_2|NZ_CP043612.1_736431_736776_+	pfam03840, SecG, Preprotein translocase SecG subunit	NA|92aa|up_1|NZ_CP043612.1_736920_737196_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|119aa|up_0|NZ_CP043612.1_737282_737639_+	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins	NA|544aa|down_0|NZ_CP043612.1_737794_739426_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|400aa|down_1|NZ_CP043612.1_739749_740949_+	cd16018, Enpp, Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin	NA|510aa|down_2|NZ_CP043612.1_741312_742842_-	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|132aa|down_3|NZ_CP043612.1_743066_743462_-	NA	NA|69aa|down_4|NZ_CP043612.1_743552_743759_+	PRK02946, aceK, bifunctional isocitrate dehydrogenase kinase/phosphatase protein; Validated	NA|385aa|down_5|NZ_CP043612.1_743799_744954_+	NA	NA|366aa|down_6|NZ_CP043612.1_745298_746396_+	NA	NA|255aa|down_7|NZ_CP043612.1_747495_748260_+	NA	NA|270aa|down_8|NZ_CP043612.1_748391_749201_+	NA	NA|218aa|down_9|NZ_CP043612.1_749426_750080_+	NA
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	2	1170762-1170837	2	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	AAAGCCTAAAGCTTAAGGCCTAAAGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA,NA|192aa|down_9|NZ_CP043612.1_1180637_1181213_+	NA|99aa|up_9|NZ_CP043612.1_1159204_1159501_+	pfam09907, HigB_toxin, HigB_toxin, RelE-like toxic component of a toxin-antitoxin system	NA|123aa|up_8|NZ_CP043612.1_1159507_1159876_+	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|848aa|up_7|NZ_CP043612.1_1159934_1162478_-	pfam03030, H_PPase, Inorganic H+ pyrophosphatase	NA|177aa|up_6|NZ_CP043612.1_1162591_1163122_-	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|200aa|up_5|NZ_CP043612.1_1163233_1163833_-	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|834aa|up_4|NZ_CP043612.1_1164073_1166575_-	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|326aa|up_3|NZ_CP043612.1_1166644_1167622_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|249aa|up_2|NZ_CP043612.1_1168123_1168870_+	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|323aa|up_1|NZ_CP043612.1_1168935_1169904_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|208aa|up_0|NZ_CP043612.1_1170069_1170693_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|284aa|down_0|NZ_CP043612.1_1170869_1171721_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|99aa|down_1|NZ_CP043612.1_1171758_1172055_-	cd07184, E_set_Isoamylase_like_N, N-terminal Early set domain associated with the catalytic domain of isoamylase-like (also called glycogen 6-glucanohydrolase) proteins	NA|115aa|down_2|NZ_CP043612.1_1172294_1172639_+	pfam13239, 2TM, 2TM domain	NA|161aa|down_3|NZ_CP043612.1_1172650_1173133_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|244aa|down_4|NZ_CP043612.1_1173712_1174444_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|237aa|down_5|NZ_CP043612.1_1174445_1175156_+	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain	NA|243aa|down_6|NZ_CP043612.1_1175165_1175894_-	cd18109, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH	NA|845aa|down_7|NZ_CP043612.1_1175970_1178505_+	pfam01103, Bac_surface_Ag, Surface antigen	NA|356aa|down_8|NZ_CP043612.1_1178566_1179634_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|192aa|down_9|NZ_CP043612.1_1180637_1181213_+	NA
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	3	1246489-1246603	3	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	AAACTTTGCGAACCTTTGCGCTTTTTCTTTG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA|147aa|up_6|NZ_CP043612.1_1239271_1239712_-,NA|65aa|up_3|NZ_CP043612.1_1243442_1243637_-,NA|410aa|up_1|NZ_CP043612.1_1244250_1245480_-,NA|78aa|down_1|NZ_CP043612.1_1248246_1248480_+	NA|724aa|up_9|NZ_CP043612.1_1234584_1236756_-	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region	NA|438aa|up_8|NZ_CP043612.1_1236936_1238250_+	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|303aa|up_7|NZ_CP043612.1_1238344_1239253_+	COG1577, ERG12, Mevalonate kinase [Lipid metabolism]	NA|147aa|up_6|NZ_CP043612.1_1239271_1239712_-	NA	NA|700aa|up_5|NZ_CP043612.1_1239977_1242077_-	pfam13616, Rotamase_3, PPIC-type PPIASE domain	NA|419aa|up_4|NZ_CP043612.1_1242183_1243440_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|65aa|up_3|NZ_CP043612.1_1243442_1243637_-	NA	NA|186aa|up_2|NZ_CP043612.1_1243641_1244199_-	TIGR04409, LptC_YrbK, LPS export ABC transporter periplasmic protein LptC	NA|410aa|up_1|NZ_CP043612.1_1244250_1245480_-	NA	NA|245aa|up_0|NZ_CP043612.1_1245472_1246207_-	PRK13320, PRK13320, type III pantothenate kinase	NA|498aa|down_0|NZ_CP043612.1_1246742_1248236_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|78aa|down_1|NZ_CP043612.1_1248246_1248480_+	NA	NA|959aa|down_2|NZ_CP043612.1_1248590_1251467_-	cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family	NA|272aa|down_3|NZ_CP043612.1_1251546_1252362_-	pfam14292, SusE, SusE outer membrane protein	NA|536aa|down_4|NZ_CP043612.1_1252386_1253994_-	NF033071, SusD, starch-binding outer membrane lipoprotein SusD	NA|994aa|down_5|NZ_CP043612.1_1254030_1257012_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|344aa|down_6|NZ_CP043612.1_1257248_1258280_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|452aa|down_7|NZ_CP043612.1_1258455_1259811_+	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|218aa|down_8|NZ_CP043612.1_1259829_1260483_+	TIGR01990, bPGM, beta-phosphoglucomutase	NA|768aa|down_9|NZ_CP043612.1_1260622_1262926_+	PRK13807, PRK13807, maltose phosphorylase; Provisional
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	4	1311573-1311673	4	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	AGATTTCTCGTTCCTCGAAATGACAATAC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA|321aa|up_4|NZ_CP043612.1_1305476_1306439_-,NA|141aa|up_3|NZ_CP043612.1_1306458_1306881_-,NA|471aa|up_1|NZ_CP043612.1_1309334_1310747_-,NA|80aa|up_0|NZ_CP043612.1_1311029_1311269_-,NA|264aa|down_0|NZ_CP043612.1_1311931_1312723_+,NA|117aa|down_8|NZ_CP043612.1_1323789_1324140_+	NA|535aa|up_9|NZ_CP043612.1_1299858_1301463_-	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|129aa|up_8|NZ_CP043612.1_1301764_1302151_-	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown]	NA|455aa|up_7|NZ_CP043612.1_1302338_1303703_+	pfam16653, Sacchrp_dh_C, Saccharopine dehydrogenase C-terminal domain	NA|381aa|up_6|NZ_CP043612.1_1303885_1305028_-	cd07341, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|125aa|up_5|NZ_CP043612.1_1305105_1305480_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|321aa|up_4|NZ_CP043612.1_1305476_1306439_-	NA	NA|141aa|up_3|NZ_CP043612.1_1306458_1306881_-	NA	NA|463aa|up_2|NZ_CP043612.1_1307666_1309055_-	cd05680, M20_dipept_like, uncharacterized M20 dipeptidase	NA|471aa|up_1|NZ_CP043612.1_1309334_1310747_-	NA	NA|80aa|up_0|NZ_CP043612.1_1311029_1311269_-	NA	NA|264aa|down_0|NZ_CP043612.1_1311931_1312723_+	NA	NA|221aa|down_1|NZ_CP043612.1_1312832_1313495_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|528aa|down_2|NZ_CP043612.1_1313741_1315325_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|350aa|down_3|NZ_CP043612.1_1315326_1316376_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|452aa|down_4|NZ_CP043612.1_1316455_1317811_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|274aa|down_5|NZ_CP043612.1_1318082_1318904_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|309aa|down_6|NZ_CP043612.1_1320132_1321059_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|859aa|down_7|NZ_CP043612.1_1321055_1323632_-	cd09602, M1_APN, Peptidase M1 family including aminopeptidase N catalytic domain	NA|117aa|down_8|NZ_CP043612.1_1323789_1324140_+	NA	NA|144aa|down_9|NZ_CP043612.1_1324588_1325020_+	pfam15418, DUF4625, Domain of unknown function (DUF4625)
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	5	1350480-1350588	5	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	ACATTTTCTAATTGACACATTAATA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA,NA|160aa|down_1|NZ_CP043612.1_1351060_1351540_+,NA|118aa|down_9|NZ_CP043612.1_1358954_1359308_+	NA|226aa|up_9|NZ_CP043612.1_1337372_1338050_+	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|213aa|up_8|NZ_CP043612.1_1338091_1338730_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|109aa|up_7|NZ_CP043612.1_1338813_1339140_+	pfam01035, DNA_binding_1, 6-O-methylguanine DNA methyltransferase, DNA binding domain	NA|442aa|up_6|NZ_CP043612.1_1339315_1340641_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|450aa|up_5|NZ_CP043612.1_1340998_1342348_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|415aa|up_4|NZ_CP043612.1_1342508_1343753_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|236aa|up_3|NZ_CP043612.1_1343895_1344603_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|810aa|up_2|NZ_CP043612.1_1344736_1347166_+	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|534aa|up_1|NZ_CP043612.1_1347232_1348834_-	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown]	NA|376aa|up_0|NZ_CP043612.1_1349252_1350380_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|80aa|down_0|NZ_CP043612.1_1350606_1350846_+	pfam01106, NifU, NifU-like domain	NA|160aa|down_1|NZ_CP043612.1_1351060_1351540_+	NA	NA|106aa|down_2|NZ_CP043612.1_1351599_1351917_+	PLN02593, PLN02593, adrenodoxin-like ferredoxin protein	NA|170aa|down_3|NZ_CP043612.1_1351989_1352499_-	smart00860, SMI1_KNR4, SMI1 / KNR4 family	NA|330aa|down_4|NZ_CP043612.1_1352618_1353608_-	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|126aa|down_5|NZ_CP043612.1_1353784_1354162_-	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|824aa|down_6|NZ_CP043612.1_1354230_1356702_-	PRK11930, PRK11930, putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional	NA|133aa|down_7|NZ_CP043612.1_1357632_1358031_+	COG1480, COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only]	NA|235aa|down_8|NZ_CP043612.1_1358025_1358730_-	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain	NA|118aa|down_9|NZ_CP043612.1_1358954_1359308_+	NA
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	6	1659596-1659714	6	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	AAGGGATTGATTCAGCTGTATTGTAACCCT	30	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA,NA|131aa|down_6|NZ_CP043612.1_1665154_1665547_-	NA|140aa|up_9|NZ_CP043612.1_1646833_1647253_+	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain	NA|997aa|up_8|NZ_CP043612.1_1647612_1650603_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|527aa|up_7|NZ_CP043612.1_1650620_1652201_+	cd08977, SusD, starch binding outer membrane protein SusD	NA|418aa|up_6|NZ_CP043612.1_1652267_1653521_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|260aa|up_5|NZ_CP043612.1_1653545_1654325_-	pfam14125, DUF4292, Domain of unknown function (DUF4292)	NA|451aa|up_4|NZ_CP043612.1_1654332_1655685_-	sd00006, TPR, Tetratricopeptide repeat	NA|339aa|up_3|NZ_CP043612.1_1655732_1656749_-	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars	NA|145aa|up_2|NZ_CP043612.1_1656813_1657248_-	PRK00601, dut, dUTP diphosphatase	NA|486aa|up_1|NZ_CP043612.1_1657275_1658733_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|149aa|up_0|NZ_CP043612.1_1658828_1659275_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|287aa|down_0|NZ_CP043612.1_1659934_1660795_-	pfam00231, ATP-synt, ATP synthase	NA|526aa|down_1|NZ_CP043612.1_1660884_1662462_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|178aa|down_2|NZ_CP043612.1_1662499_1663033_-	pfam00213, OSCP, ATP synthase delta (OSCP) subunit	NA|167aa|down_3|NZ_CP043612.1_1663037_1663538_-	PRK14471, PRK14471, F0F1 ATP synthase subunit B; Provisional	NA|66aa|down_4|NZ_CP043612.1_1663628_1663826_-	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c	NA|392aa|down_5|NZ_CP043612.1_1663860_1665036_-	PRK13419, PRK13419, F0F1 ATP synthase subunit A; Provisional	NA|131aa|down_6|NZ_CP043612.1_1665154_1665547_-	NA	NA|76aa|down_7|NZ_CP043612.1_1665604_1665832_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|133aa|down_8|NZ_CP043612.1_1665812_1666211_-	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|871aa|down_9|NZ_CP043612.1_1666223_1668836_-	sd00006, TPR, Tetratricopeptide repeat
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	7	2066315-2066523	1	PILER-CR	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	TTAAACGGATGTCCTGATACTGACGGTGACGGAATCGCTGATAAAGA	47	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA|127aa|up_5|NZ_CP043612.1_2059013_2059394_-,NA|72aa|up_3|NZ_CP043612.1_2059967_2060183_+,NA|48aa|down_2|NZ_CP043612.1_2070862_2071006_-,NA|107aa|down_3|NZ_CP043612.1_2071296_2071617_+,NA|125aa|down_4|NZ_CP043612.1_2071642_2072017_+,NA|119aa|down_7|NZ_CP043612.1_2074029_2074386_+	NA|761aa|up_9|NZ_CP043612.1_2051751_2054034_+	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]	NA|238aa|up_8|NZ_CP043612.1_2054120_2054834_+	pfam02565, RecO_C, Recombination protein O C terminal	NA|1134aa|up_7|NZ_CP043612.1_2054964_2058366_+	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|127aa|up_6|NZ_CP043612.1_2058373_2058754_+	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|127aa|up_5|NZ_CP043612.1_2059013_2059394_-	NA	NA|119aa|up_4|NZ_CP043612.1_2059429_2059786_-	smart00960, Robl_LC7, Roadblock/LC7 domain	NA|72aa|up_3|NZ_CP043612.1_2059967_2060183_+	NA	NA|199aa|up_2|NZ_CP043612.1_2060302_2060899_+	PRK14788, PRK14788, lipoprotein signal peptidase; Provisional	NA|1053aa|up_1|NZ_CP043612.1_2061040_2064199_+	PRK13909, PRK13909, RecB-like helicase	NA|398aa|up_0|NZ_CP043612.1_2064281_2065475_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|921aa|down_0|NZ_CP043612.1_2067119_2069882_+	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily	NA|225aa|down_1|NZ_CP043612.1_2070181_2070856_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|48aa|down_2|NZ_CP043612.1_2070862_2071006_-	NA	NA|107aa|down_3|NZ_CP043612.1_2071296_2071617_+	NA	NA|125aa|down_4|NZ_CP043612.1_2071642_2072017_+	NA	NA|259aa|down_5|NZ_CP043612.1_2072101_2072878_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|268aa|down_6|NZ_CP043612.1_2073045_2073849_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|119aa|down_7|NZ_CP043612.1_2074029_2074386_+	NA	NA|173aa|down_8|NZ_CP043612.1_2074475_2074994_+	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|305aa|down_9|NZ_CP043612.1_2075288_2076203_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	8	3489526-3489752	7	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	ATTAAATTATCTAACATTGTTAAGTAAAAG	30	0	0	NA	NA	NA	3	3	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA|70aa|up_6|NZ_CP043612.1_3480631_3480841_-,NA|100aa|down_1|NZ_CP043612.1_3490802_3491102_-,NA|114aa|down_6|NZ_CP043612.1_3494145_3494487_-,NA|93aa|down_7|NZ_CP043612.1_3495544_3495823_-,NA|231aa|down_8|NZ_CP043612.1_3496003_3496696_-,NA|273aa|down_9|NZ_CP043612.1_3496721_3497540_-	NA|757aa|up_9|NZ_CP043612.1_3476779_3479050_-	cd03822, GT4_mannosyltransferase-like, mannosyltransferases of glycosyltransferase family 4 and similar proteins	NA|156aa|up_8|NZ_CP043612.1_3479448_3479916_-	pfam07274, DUF1440, Protein of unknown function (DUF1440)	NA|170aa|up_7|NZ_CP043612.1_3479943_3480453_-	pfam12867, DinB_2, DinB superfamily	NA|70aa|up_6|NZ_CP043612.1_3480631_3480841_-	NA	NA|127aa|up_5|NZ_CP043612.1_3480857_3481238_-	pfam13564, DoxX_2, DoxX-like family	NA|244aa|up_4|NZ_CP043612.1_3481573_3482305_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|202aa|up_3|NZ_CP043612.1_3482375_3482981_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|473aa|up_2|NZ_CP043612.1_3483355_3484774_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|1055aa|up_1|NZ_CP043612.1_3485120_3488285_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|406aa|up_0|NZ_CP043612.1_3488297_3489515_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|198aa|down_0|NZ_CP043612.1_3489763_3490357_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|100aa|down_1|NZ_CP043612.1_3490802_3491102_-	NA	NA|143aa|down_2|NZ_CP043612.1_3491444_3491873_+	cd02214, cupin_MJ1618, Methanocaldococcus jannaschii MJ1618 and related proteins, cupin domain	NA|115aa|down_3|NZ_CP043612.1_3492035_3492380_-	pfam12973, Cupin_7, ChrR Cupin-like domain	NA|142aa|down_4|NZ_CP043612.1_3492581_3493007_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|265aa|down_5|NZ_CP043612.1_3493257_3494052_-	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA	NA|114aa|down_6|NZ_CP043612.1_3494145_3494487_-	NA	NA|93aa|down_7|NZ_CP043612.1_3495544_3495823_-	NA	NA|231aa|down_8|NZ_CP043612.1_3496003_3496696_-	NA	NA|273aa|down_9|NZ_CP043612.1_3496721_3497540_-	NA
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	9	4566006-4566204	8,2	CRISPRCasFinder,PILER-CR	no	cas3	csa3,DEDDh,PD-DExK,cas3,WYL,RT	Unclear	GTAGACGCACTGCAGTGCGTCTCTACGA,GGACATACTGGACGTAGACGCACTGCAGTGCGTCTCTACGA	28,41	0	0	NA	NA	NA:NA	2,2	2	Unclear	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA|175aa|up_2|NZ_CP043612.1_4562022_4562547_+,NA|127aa|down_1|NZ_CP043612.1_4567316_4567697_+,NA|168aa|down_2|NZ_CP043612.1_4567698_4568202_+,NA|588aa|down_5|NZ_CP043612.1_4569169_4570933_-,NA|115aa|down_8|NZ_CP043612.1_4574271_4574616_-,NA|285aa|down_9|NZ_CP043612.1_4574666_4575521_-	NA|151aa|up_9|NZ_CP043612.1_4552481_4552934_+	pfam13588, HSDR_N_2, Type I restriction enzyme R protein N-terminus (HSDR_N)	NA|340aa|up_8|NZ_CP043612.1_4552955_4553975_+	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|278aa|up_7|NZ_CP043612.1_4554008_4554842_+	COG1360, MotB, Flagellar motor protein [Cell motility and secretion]	NA|207aa|up_6|NZ_CP043612.1_4555011_4555632_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|779aa|up_5|NZ_CP043612.1_4555714_4558051_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|902aa|up_4|NZ_CP043612.1_4558363_4561069_+	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|256aa|up_3|NZ_CP043612.1_4561131_4561899_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|175aa|up_2|NZ_CP043612.1_4562022_4562547_+	NA	NA|303aa|up_1|NZ_CP043612.1_4562631_4563540_-	pfam01734, Patatin, Patatin-like phospholipase	NA|687aa|up_0|NZ_CP043612.1_4563671_4565732_-	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|248aa|down_0|NZ_CP043612.1_4566572_4567316_+	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	NA|127aa|down_1|NZ_CP043612.1_4567316_4567697_+	NA	NA|168aa|down_2|NZ_CP043612.1_4567698_4568202_+	NA	NA|132aa|down_3|NZ_CP043612.1_4568204_4568600_-	pfam14254, DUF4348, Domain of unknown function (DUF4348)	NA|180aa|down_4|NZ_CP043612.1_4568599_4569139_-	pfam08002, DUF1697, Protein of unknown function (DUF1697)	NA|588aa|down_5|NZ_CP043612.1_4569169_4570933_-	NA	cas3|703aa|down_6|NZ_CP043612.1_4571223_4573332_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|202aa|down_7|NZ_CP043612.1_4573603_4574209_-	pfam08447, PAS_3, PAS fold	NA|115aa|down_8|NZ_CP043612.1_4574271_4574616_-	NA	NA|285aa|down_9|NZ_CP043612.1_4574666_4575521_-	NA
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	10	5121518-5121617	9	CRISPRCasFinder	no	RT	csa3,DEDDh,PD-DExK,cas3,WYL,RT	Unclear	AAGTAAAAAATCACAATCATTTCCTTTATAGCAAA	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA,NA|128aa|down_1|NZ_CP043612.1_5122995_5123379_-,NA|99aa|down_6|NZ_CP043612.1_5128625_5128922_-,NA|380aa|down_7|NZ_CP043612.1_5128927_5130067_-	NA|767aa|up_9|NZ_CP043612.1_5103809_5106110_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|238aa|up_8|NZ_CP043612.1_5106203_5106917_-	COG4099, COG4099, Predicted peptidase [General function prediction only]	NA|460aa|up_7|NZ_CP043612.1_5106922_5108302_-	pfam10091, Glycoamylase, Putative glucoamylase	NA|486aa|up_6|NZ_CP043612.1_5108377_5109835_-	cd08977, SusD, starch binding outer membrane protein SusD	NA|1003aa|up_5|NZ_CP043612.1_5109839_5112848_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|915aa|up_4|NZ_CP043612.1_5113092_5115837_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|395aa|up_3|NZ_CP043612.1_5115939_5117124_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|698aa|up_2|NZ_CP043612.1_5117427_5119521_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|358aa|up_1|NZ_CP043612.1_5119577_5120651_-	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily	NA|201aa|up_0|NZ_CP043612.1_5120833_5121436_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|342aa|down_0|NZ_CP043612.1_5121852_5122878_-	pfam04326, AlbA_2, Putative DNA-binding domain	NA|128aa|down_1|NZ_CP043612.1_5122995_5123379_-	NA	NA|333aa|down_2|NZ_CP043612.1_5123441_5124440_-	pfam02151, UVR, UvrB/uvrC motif	NA|124aa|down_3|NZ_CP043612.1_5125582_5125954_+	pfam01381, HTH_3, Helix-turn-helix	RT|285aa|down_4|NZ_CP043612.1_5125928_5126783_+	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|294aa|down_5|NZ_CP043612.1_5127413_5128295_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|99aa|down_6|NZ_CP043612.1_5128625_5128922_-	NA	NA|380aa|down_7|NZ_CP043612.1_5128927_5130067_-	NA	NA|280aa|down_8|NZ_CP043612.1_5130099_5130939_-	TIGR03780, Bac_Flav_CT_N, Bacteroides conjugative transposon TraN protein	NA|430aa|down_9|NZ_CP043612.1_5130955_5132245_-	TIGR03779, Bac_Flav_CT_M, Bacteroides conjugative transposon TraM protein
GCF_008369745.1_ASM836974v1	NZ_CP043612	Flavobacterium nitrogenifigens strain KACC 18538 chromosome, complete genome	11	5451095-5451189	10	CRISPRCasFinder	no		csa3,DEDDh,PD-DExK,cas3,WYL,RT	Orphan	ATATTCCTATCGGAATATTAAAAAT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,PD-DExK,cas3,WYL,RT	NA|402aa|up_6|NZ_CP043612.1_5442781_5443987_-,NA|144aa|down_0|NZ_CP043612.1_5451197_5451629_-,NA|136aa|down_1|NZ_CP043612.1_5451895_5452303_-,NA|113aa|down_7|NZ_CP043612.1_5457727_5458066_+	NA|482aa|up_9|NZ_CP043612.1_5439417_5440863_+	TIGR02376, Copper-containing_nitrite_reductase, nitrite reductase, copper-containing	NA|259aa|up_8|NZ_CP043612.1_5440879_5441656_+	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|199aa|up_7|NZ_CP043612.1_5441673_5442270_+	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|402aa|up_6|NZ_CP043612.1_5442781_5443987_-	NA	NA|244aa|up_5|NZ_CP043612.1_5444249_5444981_-	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein	NA|745aa|up_4|NZ_CP043612.1_5445006_5447241_-	COG3256, NorB, Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]	NA|176aa|up_3|NZ_CP043612.1_5447339_5447867_-	cd13922, Azurin, Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase	NA|149aa|up_2|NZ_CP043612.1_5447887_5448334_-	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein	NA|260aa|up_1|NZ_CP043612.1_5448534_5449314_+	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|505aa|up_0|NZ_CP043612.1_5449349_5450864_+	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain	NA|144aa|down_0|NZ_CP043612.1_5451197_5451629_-	NA	NA|136aa|down_1|NZ_CP043612.1_5451895_5452303_-	NA	NA|393aa|down_2|NZ_CP043612.1_5452310_5453489_-	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88	NA|132aa|down_3|NZ_CP043612.1_5453607_5454003_+	pfam10990, DUF2809, Protein of unknown function (DUF2809)	NA|193aa|down_4|NZ_CP043612.1_5453977_5454556_+	PRK14823, PRK14823, putative deoxyribonucleoside-triphosphatase; Provisional	NA|640aa|down_5|NZ_CP043612.1_5454759_5456679_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|261aa|down_6|NZ_CP043612.1_5456852_5457635_+	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|113aa|down_7|NZ_CP043612.1_5457727_5458066_+	NA	NA|487aa|down_8|NZ_CP043612.1_5458137_5459598_-	cd03890, M20_pepD, M20 Peptidase D has specificity for beta-alanyl-L-histidine dipeptide	NA|354aa|down_9|NZ_CP043612.1_5459804_5460866_+	pfam12725, DUF3810, Protein of unknown function (DUF3810)
