assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008369625.1_ASM836962v1	NZ_CP043557	Vibrio cholerae strain RFB05 chromosome 1, complete sequence	1	192971-196542	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL,csa3,DinG,RT,TnsE_C,cas3,csx1	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTNCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	59,59,25	59	TypeI-F	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL,csa3,DinG,RT,TnsE_C,cas3,csx1,PD-DExK,cas5,cas8c,cas7,cas4,cas2	NA|392aa|up_9|NZ_CP043557.1_182525_183701_-,NA	NA|392aa|up_9|NZ_CP043557.1_182525_183701_-	NA	NA|437aa|up_8|NZ_CP043557.1_183839_185150_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|201aa|up_7|NZ_CP043557.1_185343_185946_-	PRK14150, PRK14150, heat shock protein GrpE; Provisional	NA|295aa|up_6|NZ_CP043557.1_186091_186976_+	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|555aa|up_5|NZ_CP043557.1_187105_188770_+	PRK10869, PRK10869, recombination and repair protein; Provisional	NA|137aa|up_4|NZ_CP043557.1_188877_189288_+	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane]	NA|104aa|up_3|NZ_CP043557.1_189363_189675_-	PRK01777, PRK01777, RnfH family protein	NA|145aa|up_2|NZ_CP043557.1_189671_190106_-	COG2867, COG2867, Oligoketide cyclase/lipid transport protein [Lipid metabolism]	NA|162aa|up_1|NZ_CP043557.1_190289_190775_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|413aa|up_0|NZ_CP043557.1_191375_192614_+	PRK09692, PRK09692, integrase; Provisional	cas6f|213aa|down_0|NZ_CP043557.1_196697_197336_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|344aa|down_1|NZ_CP043557.1_197345_198377_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|296aa|down_2|NZ_CP043557.1_198388_199276_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|421aa|down_3|NZ_CP043557.1_199272_200535_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3f|1123aa|down_4|NZ_CP043557.1_200764_204133_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|330aa|down_5|NZ_CP043557.1_204129_205119_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	WYL|265aa|down_6|NZ_CP043557.1_205233_206028_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|173aa|down_7|NZ_CP043557.1_206443_206962_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|659aa|down_8|NZ_CP043557.1_207088_209065_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|263aa|down_9|NZ_CP043557.1_209064_209853_+	pfam13503, DUF4123, Domain of unknown function (DUF4123)
GCF_008369625.1_ASM836962v1	NZ_CP043557	Vibrio cholerae strain RFB05 chromosome 1, complete sequence	2	645673-645916	2	PILER-CR	no		DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL,csa3,DinG,RT,TnsE_C,cas3,csx1	Orphan	AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	49	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL,csa3,DinG,RT,TnsE_C,cas3,csx1,PD-DExK,cas5,cas8c,cas7,cas4,cas2	NA,NA|68aa|down_8|NZ_CP043557.1_656632_656836_-	NA|186aa|up_9|NZ_CP043557.1_637645_638203_+	COG0762, COG0762, Predicted integral membrane protein [Function unknown]	NA|97aa|up_8|NZ_CP043557.1_638202_638493_+	PRK05090, PRK05090, hypothetical protein; Validated	NA|144aa|up_7|NZ_CP043557.1_638538_638970_+	pfam14467, DUF4426, Domain of unknown function (DUF4426)	NA|201aa|up_6|NZ_CP043557.1_639039_639642_+	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|392aa|up_5|NZ_CP043557.1_639635_640811_+	PRK05660, PRK05660, radical SAM family heme chaperone HemW	NA|307aa|up_4|NZ_CP043557.1_640875_641796_-	PRK00971, PRK00971, glutaminase; Provisional	NA|240aa|up_3|NZ_CP043557.1_641906_642626_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|354aa|up_2|NZ_CP043557.1_642865_643927_+	PRK10880, PRK10880, adenine DNA glycosylase	NA|91aa|up_1|NZ_CP043557.1_643940_644213_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|376aa|up_0|NZ_CP043557.1_644314_645442_+	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC	NA|542aa|down_0|NZ_CP043557.1_646205_647831_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|285aa|down_1|NZ_CP043557.1_648862_649717_-	PRK09430, djlA, co-chaperone DjlA	NA|788aa|down_2|NZ_CP043557.1_649863_652227_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|432aa|down_3|NZ_CP043557.1_652279_653575_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|331aa|down_4|NZ_CP043557.1_653564_654557_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|272aa|down_5|NZ_CP043557.1_654570_655386_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|127aa|down_6|NZ_CP043557.1_655457_655838_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|270aa|down_7|NZ_CP043557.1_655848_656658_+	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA|68aa|down_8|NZ_CP043557.1_656632_656836_-	NA	NA|166aa|down_9|NZ_CP043557.1_656807_657305_-	pfam00186, DHFR_1, Dihydrofolate reductase
GCF_008369625.1_ASM836962v1	NZ_CP043558	Vibrio cholerae strain RFB05 chromosome 2, complete sequence	1	145535-146747	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3	PD-DExK,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3	Type I-U, Type I-C, or Type I-U?,Type I-A,Type I-C	GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC,GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC,GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	18,18,18	18	TypeI-U,TypeI-C,orTypeI-U?,TypeI-A,TypeI-C	DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,WYL,csa3,DinG,RT,TnsE_C,cas3,csx1,PD-DExK,cas5,cas8c,cas7,cas4,cas2	NA|191aa|up_9|NZ_CP043558.1_129205_129778_-,NA|784aa|up_7|NZ_CP043558.1_131955_134307_+,NA|311aa|down_0|NZ_CP043558.1_146884_147817_+,NA|143aa|down_1|NZ_CP043558.1_147800_148229_+,NA|520aa|down_4|NZ_CP043558.1_151443_153003_+,NA|334aa|down_5|NZ_CP043558.1_153096_154098_+	NA|191aa|up_9|NZ_CP043558.1_129205_129778_-	NA	NA|265aa|up_8|NZ_CP043558.1_130188_130983_-	cd07404, MPP_MS158, Microscilla MS158 and related proteins, metallophosphatase domain	NA|784aa|up_7|NZ_CP043558.1_131955_134307_+	NA	cas3|825aa|up_6|NZ_CP043558.1_137342_139817_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|235aa|up_5|NZ_CP043558.1_139844_140549_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|656aa|up_4|NZ_CP043558.1_140545_142513_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|290aa|up_3|NZ_CP043558.1_142529_143399_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|208aa|up_2|NZ_CP043558.1_143403_144027_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|344aa|up_1|NZ_CP043558.1_144023_145055_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|98aa|up_0|NZ_CP043558.1_145065_145359_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|311aa|down_0|NZ_CP043558.1_146884_147817_+	NA	NA|143aa|down_1|NZ_CP043558.1_147800_148229_+	NA	NA|306aa|down_2|NZ_CP043558.1_148472_149390_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|307aa|down_3|NZ_CP043558.1_150255_151176_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|520aa|down_4|NZ_CP043558.1_151443_153003_+	NA	NA|334aa|down_5|NZ_CP043558.1_153096_154098_+	NA	NA|437aa|down_6|NZ_CP043558.1_154307_155618_-	cd17808, HipA_Ec_like, type II toxin-antitoxin sytem toxin HipA from Escherichia coli and similar proteins	NA|568aa|down_7|NZ_CP043558.1_155780_157484_-	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|49aa|down_8|NZ_CP043558.1_157653_157800_-	PRK13512, PRK13512, coenzyme A disulfide reductase; Provisional	NA|62aa|down_9|NZ_CP043558.1_157869_158055_-	pfam11127, DUF2892, Protein of unknown function (DUF2892)
