The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042331	Bosea sp. F3-2 chromosome, complete genome	6379363	335809	346977	6379363	tRNA	uncultured_Mediterranean_phage(77.78%)	12	NA	NA
WP_149128723.1|335809_336820_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	39.7	5.2e-23
WP_149128724.1|336867_337698_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.5	2.8e-30
WP_149128725.1|337694_338393_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	1.0e-38
WP_149133598.1|338632_339673_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	28.0	6.6e-13
WP_149128726.1|339754_340000_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	57.7	2.6e-08
WP_149128727.1|340098_340800_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_149128728.1|340796_341600_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	48.0	1.3e-53
WP_149128729.1|341729_342014_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_149128730.1|342218_343517_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	2.6e-91
WP_149128731.1|343709_344471_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.3	2.9e-34
WP_149128732.1|344490_345153_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_149133599.1|345720_346977_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I2E8W3	Clostridium_phage	45.5	1.7e-15
>prophage 2
NZ_CP042331	Bosea sp. F3-2 chromosome, complete genome	6379363	2218111	2294976	6379363	integrase,holin,tRNA,transposase	Paramecium_bursaria_Chlorella_virus(22.22%)	58	2212877:2212896	2267871:2267890
2212877:2212896	attL	TCGGCATCGCCCGCGCCATC	NA	NA	NA	NA
WP_149130209.1|2218111_2219809_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.7	2.2e-58
WP_149130210.1|2219902_2221525_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_149130211.1|2221602_2223312_-	NAD(P)-binding protein	NA	A0A1V0SI18	Klosneuvirus	23.7	4.5e-35
WP_149130212.1|2223343_2223922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130213.1|2224115_2225375_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_149130214.1|2225503_2226442_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_149130215.1|2226483_2227494_-	metallophosphoesterase	NA	A0A2C9CX42	Yersinia_phage	28.8	4.9e-21
WP_149130216.1|2227312_2228434_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_149130217.1|2230410_2230644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130218.1|2230845_2231544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130219.1|2231540_2232113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130220.1|2232109_2234245_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_149130221.1|2234265_2235327_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_149130222.1|2235328_2237233_+	TniQ family protein	NA	NA	NA	NA	NA
WP_149130223.1|2237218_2237437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130224.1|2237449_2237641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130225.1|2237787_2239590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130226.1|2239925_2243429_-	DEAD/DEAH box helicase	NA	M1H1D9	Paramecium_bursaria_Chlorella_virus	24.9	2.6e-13
WP_149130227.1|2243415_2244198_-	DUF1837 domain-containing protein	NA	NA	NA	NA	NA
WP_149130228.1|2244344_2245496_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_149130229.1|2245492_2246779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130230.1|2246775_2248509_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130231.1|2248909_2250406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130232.1|2250706_2251786_+	DUF1837 domain-containing protein	NA	NA	NA	NA	NA
WP_149130233.1|2251782_2254401_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_149130234.1|2254972_2255974_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_149133771.1|2256172_2256505_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_149130235.1|2256739_2258170_+	DUF1254 domain-containing protein	NA	M1HNU9	Paramecium_bursaria_Chlorella_virus	34.6	3.3e-47
WP_149130236.1|2258230_2258587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130237.1|2259133_2260468_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_149130238.1|2260641_2260857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130239.1|2261249_2261729_+	VOC family protein	NA	NA	NA	NA	NA
WP_149130240.1|2261791_2262787_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_149130241.1|2263532_2264717_+	winged helix-turn-helix transcriptional regulator	NA	D7RWK9	Brochothrix_phage	27.2	1.1e-32
WP_149130242.1|2265097_2266300_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	32.1	8.7e-49
WP_149130243.1|2266305_2267526_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	35.0	4.1e-54
WP_149130244.1|2267546_2269274_-	dipeptide ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	30.7	1.8e-07
2267871:2267890	attR	GATGGCGCGGGCGATGCCGA	NA	NA	NA	NA
WP_149130245.1|2269270_2270398_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_149130246.1|2270401_2271388_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_149130247.1|2271451_2273410_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_149130248.1|2273496_2274438_-	aldose 1-epimerase	NA	NA	NA	NA	NA
WP_149130249.1|2274671_2276399_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_149133772.1|2276479_2277301_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_149130250.1|2277357_2278614_+	glucarate dehydratase	NA	NA	NA	NA	NA
WP_149130251.1|2278637_2279528_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_149130252.1|2279751_2280630_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_149133773.1|2280704_2281778_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_149130253.1|2281774_2282785_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_149130254.1|2282784_2283840_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_149128711.1|2284222_2285239_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_149130255.1|2285419_2286865_+|transposase	IS1182 family transposase	transposase	NA	NA	NA	NA
WP_149128711.1|2287059_2288076_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_149133774.1|2288460_2288706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149133775.1|2288639_2289158_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130256.1|2289200_2290643_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_149130257.1|2290840_2291884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130258.1|2293057_2293426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130259.1|2293818_2294976_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP042331	Bosea sp. F3-2 chromosome, complete genome	6379363	2342471	2381841	6379363	protease,transposase,tail,head	Rhodobacter_phage(18.18%)	35	NA	NA
WP_149129006.1|2342471_2343226_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	33.9	4.8e-13
WP_149130297.1|2343285_2344170_-	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_149130298.1|2344768_2345755_-	sugar kinase	NA	NA	NA	NA	NA
WP_149130299.1|2345669_2346119_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_149130300.1|2346211_2347657_+	cation diffusion facilitator family transporter	NA	NA	NA	NA	NA
WP_149130301.1|2347779_2350425_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	5.4e-19
WP_149130302.1|2350777_2353075_+	PAS domain-containing protein	NA	A0A1V0SGX0	Hokovirus	36.3	9.1e-31
WP_149130303.1|2353619_2354348_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_149130304.1|2354687_2355443_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA	NA
WP_149130305.1|2355679_2355988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130306.1|2356113_2357565_-	porin	NA	NA	NA	NA	NA
WP_149130307.1|2358083_2361041_-	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA	NA
WP_149133780.1|2361054_2362551_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_149130308.1|2362642_2363326_-	response regulator	NA	W8CYM9	Bacillus_phage	33.3	8.2e-28
WP_149133781.1|2363548_2364610_-	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	27.5	1.7e-19
WP_149130309.1|2364906_2365428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149130310.1|2365417_2365894_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_149130311.1|2365898_2367878_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_149133782.1|2367885_2368356_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_149130312.1|2368397_2369501_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA	NA
WP_149130313.1|2369671_2371045_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_149130314.1|2371054_2371723_-	response regulator	NA	NA	NA	NA	NA
WP_149130315.1|2371762_2372086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149130316.1|2372149_2376067_-	hypothetical protein	NA	A0A0K1LLC1	Rhodobacter_phage	37.9	1.1e-209
WP_149130317.1|2376066_2376498_-	peptidase P60	NA	F4YXU4	Roseobacter_phage	48.6	2.8e-34
WP_149130318.1|2376494_2377376_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	38.6	1.9e-53
WP_149130319.1|2377385_2378027_-	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	51.9	9.6e-55
WP_149130320.1|2378036_2378630_-|tail	phage tail tape measure protein	tail	A0A0A7DVI6	Escherichia_phage	30.0	4.8e-08
WP_149130321.1|2378666_2378864_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_149130322.1|2378860_2379205_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_149130323.1|2379215_2379626_-|tail	phage major tail protein, TP901-1 family	tail	I3UM07	Rhodobacter_phage	40.1	5.4e-19
WP_149130324.1|2379662_2380073_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_149130325.1|2380069_2380408_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_149130326.1|2380411_2380987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149133783.1|2381106_2381841_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
