The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042269	Pseudomonas aeruginosa strain HOU1 chromosome, complete genome	6123373	650696	704695	6123373	tail,transposase,plate,tRNA	uncultured_Caudovirales_phage(28.0%)	56	NA	NA
WP_003129196.1|650696_651722_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.1	8.3e-109
WP_003085061.1|651800_652370_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003099587.1|652453_652807_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_023121890.1|652797_653340_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_126577564.1|653312_654545_-	multifunctional CCA addition/repair protein	NA	A0A076G5T8	Escherichia_phage	43.1	2.6e-77
WP_009875777.1|654588_655095_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_003099581.1|655188_656742_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_003099579.1|656738_658010_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.2	4.2e-09
WP_003085078.1|658110_660033_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
WP_003099577.1|660311_660644_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA	NA
WP_003113213.1|660687_661539_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	33.3	1.1e-08
WP_033960833.1|661538_661919_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003161932.1|661955_662762_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_033936327.1|662877_663864_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_003109024.1|663860_665153_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_031685245.1|665133_667905_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_058180962.1|668031_669048_+	phosphotransferase	NA	NA	NA	NA	NA
WP_003117959.1|669044_669719_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003099547.1|669720_670479_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_126577563.1|670479_671535_-	alpha/beta hydrolase family protein	NA	NA	NA	NA	NA
WP_126577562.1|671686_674080_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_003085103.1|674125_674758_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003085106.1|674886_675921_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003085109.1|676154_677264_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.4	7.8e-28
WP_003099539.1|677319_678366_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010793491.1|678479_679727_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003099535.1|679832_680663_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003085122.1|680786_681461_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003099532.1|681460_682279_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_031632149.1|682351_683830_+	anthranilate synthase component I	NA	NA	NA	NA	NA
WP_003121843.1|684016_684331_-	pyocin activator PrtN family protein	NA	NA	NA	NA	NA
WP_003113202.1|684430_685201_-	helix-turn-helix transcriptional regulator	NA	A0A1B0Z078	Pseudomonas_phage	59.1	1.4e-71
WP_003085132.1|685658_685859_+	repressor PtrB	NA	W6ATC1	Enterobacter_phage	58.3	3.7e-05
WP_003459419.1|685906_686266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003136910.1|686576_687593_+|transposase	IS110-like element ISPa11 family transposase	transposase	NA	NA	NA	NA
WP_003118908.1|688000_688450_+	hypothetical protein	NA	B5TK61	Pseudomonas_phage	53.3	5.0e-26
WP_003101620.1|688471_688987_+	hypothetical protein	NA	A0A2H4J881	uncultured_Caudovirales_phage	43.4	1.8e-32
WP_003085141.1|688983_689541_+|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	71.1	4.6e-45
WP_003085143.1|689693_690020_+	GPW/gp25 family protein	NA	A0A2H4JA09	uncultured_Caudovirales_phage	60.2	3.2e-30
WP_003085151.1|690016_690904_+	bacteriophage protein	NA	S4TNY7	Salmonella_phage	59.8	5.3e-88
WP_003137385.1|690896_691430_+|tail	phage tail protein I	tail	Q9ZXK7	Pseudomonas_virus	64.6	5.2e-62
WP_003101626.1|691431_693540_+|tail	phage tail protein	tail	Q9ZXK6	Pseudomonas_virus	52.1	2.5e-224
WP_003085172.1|693548_693989_+|tail	tail fiber assembly protein	tail	NA	NA	NA	NA
WP_003109051.1|694031_695192_+|tail	phage tail sheath family protein	tail	Q38068	Phage_PS17	83.4	2.7e-188
WP_003085175.1|695204_695708_+|tail	phage major tail tube protein	tail	Q7M2A5	Pseudomonas_phage	73.5	8.0e-65
WP_003085178.1|695722_696067_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_015502284.1|696236_698474_+|tail	tail length determinator protein	tail	NA	NA	NA	NA
WP_003085182.1|698483_699356_+|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	51.7	3.9e-75
WP_003101635.1|699330_699537_+|tail	tail protein X	tail	A0A2H4J9Z9	uncultured_Caudovirales_phage	64.2	2.3e-18
WP_003101637.1|699594_700584_+	phage late control D family protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	55.8	2.2e-106
WP_003085188.1|700616_701246_+	glycoside hydrolase family 19 protein	NA	A0A125RNP1	Pseudomonas_phage	78.5	3.2e-87
WP_003101639.1|701242_701605_+	hypothetical protein	NA	H2BDA0	Pseudomonas_phage	47.9	1.9e-15
WP_126577693.1|701601_701859_+	hypothetical protein	NA	A0A125RNP3	Pseudomonas_phage	64.6	6.4e-18
WP_023092374.1|702205_702811_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	65.8	4.6e-75
WP_126577694.1|702812_703862_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.8	1.8e-111
WP_003142812.1|703858_704695_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	56.9	1.2e-70
>prophage 2
NZ_CP042269	Pseudomonas aeruginosa strain HOU1 chromosome, complete genome	6123373	1503788	1512816	6123373		Bacillus_phage(33.33%)	8	NA	NA
WP_003098558.1|1503788_1504424_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.3	1.0e-40
WP_017148388.1|1504469_1505363_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	34.3	3.0e-06
WP_003113871.1|1505467_1506472_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.3	7.0e-36
WP_003092272.1|1506897_1507221_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_003113873.1|1507287_1509855_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.1	3.2e-24
WP_003098486.1|1509980_1510988_-	TolB family protein	NA	NA	NA	NA	NA
WP_003092262.1|1511135_1511642_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	76.0	8.1e-57
WP_003092260.1|1511775_1512816_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	59.5	1.5e-113
>prophage 3
NZ_CP042269	Pseudomonas aeruginosa strain HOU1 chromosome, complete genome	6123373	2435669	2442563	6123373	tRNA	uncultured_Caudovirales_phage(83.33%)	9	NA	NA
WP_003160440.1|2435669_2436950_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	4.8e-98
WP_033936754.1|2436951_2438349_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003097628.1|2438353_2439328_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_003108776.1|2439415_2440399_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	74.3	9.3e-142
WP_003090393.1|2440395_2440731_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	69.4	3.3e-38
WP_003090391.1|2440727_2441033_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_003090389.1|2441032_2441392_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.7	1.4e-34
WP_003090387.1|2441388_2441784_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	72.1	2.7e-47
WP_003116721.1|2441894_2442563_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	82.1	1.5e-90
>prophage 4
NZ_CP042269	Pseudomonas aeruginosa strain HOU1 chromosome, complete genome	6123373	2703715	2792309	6123373	tail,transposase,plate	Tupanvirus(30.0%)	55	NA	NA
WP_003136910.1|2703715_2704732_+|transposase	IS110-like element ISPa11 family transposase	transposase	NA	NA	NA	NA
WP_003111281.1|2705126_2706047_-	transporter	NA	NA	NA	NA	NA
WP_003122368.1|2706079_2707498_-	OprD family porin	NA	NA	NA	NA	NA
WP_003111283.1|2707579_2708260_-	hydrolase	NA	NA	NA	NA	NA
WP_003089646.1|2708357_2709218_-	pirin family protein	NA	NA	NA	NA	NA
WP_003105956.1|2709318_2710257_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_034038269.1|2710260_2711904_-	alpha,alpha-trehalase TreA	NA	NA	NA	NA	NA
WP_009876491.1|2712262_2712688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149586457.1|2712680_2714000_+	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA	NA
WP_003089638.1|2714200_2715610_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	23.8	9.9e-20
WP_003089636.1|2715687_2715906_+	MbtH family protein	NA	NA	NA	NA	NA
WP_126577546.1|2715906_2716671_+	thioesterase	NA	NA	NA	NA	NA
WP_003120118.1|2716770_2717688_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003106903.1|2717684_2718590_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_034001654.1|2718586_2719342_-	metal ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	1.7e-10
WP_003113055.1|2719338_2720292_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023117339.1|2720324_2720885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003089624.1|2720881_2721211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003111932.1|2721207_2721747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015648872.1|2721743_2722946_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019726230.1|2723116_2724070_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_149586458.1|2724214_2735257_+	non-ribosomal peptide synthase/polyketide synthase	NA	A0A2K9KZV5	Tupanvirus	26.5	1.2e-99
WP_149586459.1|2735258_2738630_+	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	26.0	8.0e-92
WP_149586460.1|2738642_2751746_+	non-ribosomal peptide synthase/polyketide synthase	NA	A0A2K9KZV5	Tupanvirus	22.2	1.9e-112
WP_070163885.1|2751922_2754370_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_034038103.1|2754770_2756423_-	cyclic peptide export ABC transporter	NA	G9BWD6	Planktothrix_phage	28.2	7.8e-16
WP_149586461.1|2756782_2757610_+	N(5)-hydroxyornithine transformylase PvdF	NA	NA	NA	NA	NA
WP_012614136.1|2757669_2758524_-	formylglycine-generating enzyme family protein	NA	A0A7H6	Microcystis_virus	41.4	6.2e-41
WP_034038102.1|2758552_2759830_-|tail	pyoverdine-tailoring periplasmic protein PvdN	tail	NA	NA	NA	NA
WP_012614138.1|2759841_2761200_-|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	tail	NA	NA	NA	NA
WP_033988273.1|2761414_2763052_+	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA	NA
WP_078452170.1|2763100_2764525_-	pyoverdine export/recycling transporter outer membrane subunit OmpQ	NA	NA	NA	NA	NA
WP_003131508.1|2764530_2766522_-	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	NA	G9BWD6	Planktothrix_phage	39.3	6.9e-35
WP_003089547.1|2766521_2767697_-	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA	NA
WP_034011465.1|2767797_2768793_-	FecR family protein	NA	NA	NA	NA	NA
WP_014834002.1|2768956_2769436_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003103622.1|2769568_2770900_+	lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein	NA	NA	NA	NA	NA
WP_073649858.1|2771022_2773311_+	acylase	NA	NA	NA	NA	NA
WP_034041363.1|2773856_2774777_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003104946.1|2774873_2776025_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003089526.1|2776101_2776344_-	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
WP_003104944.1|2776638_2776875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003089521.1|2777139_2777610_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003160318.1|2777606_2779922_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003104937.1|2780338_2781544_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003110901.1|2781744_2782386_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_128654544.1|2782662_2783058_+	DUF4280 domain-containing protein	NA	NA	NA	NA	NA
WP_003104933.1|2783080_2783617_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA	NA
WP_126577552.1|2783627_2785634_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	29.5	4.5e-42
WP_003104930.1|2785633_2785822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003122693.1|2785981_2786554_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058181015.1|2786575_2789125_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.4	9.3e-77
WP_003114517.1|2789126_2790143_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_058181014.1|2790106_2791900_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_003122696.1|2791883_2792309_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 5
NZ_CP042269	Pseudomonas aeruginosa strain HOU1 chromosome, complete genome	6123373	4586314	4597317	6123373	coat,integrase	Pseudomonas_phage(88.89%)	13	4579522:4579538	4617005:4617021
4579522:4579538	attL	TGCTGCTGGCGGCGGCG	NA	NA	NA	NA
WP_052189723.1|4586314_4587340_-|integrase	tyrosine-type recombinase/integrase	integrase	Q56VN7	Pseudomonas_phage	52.9	4.4e-94
WP_003115206.1|4587339_4588632_-	hypothetical protein	NA	Q56VN8	Pseudomonas_phage	94.2	2.8e-247
WP_105412577.1|4588861_4590136_-	hypothetical protein	NA	Q56VN9	Pseudomonas_phage	88.0	7.4e-200
WP_003114150.1|4590139_4590496_-	DUF2523 domain-containing protein	NA	Q56VP0	Pseudomonas_phage	100.0	7.9e-59
WP_149586544.1|4590500_4591778_-	attachment protein	NA	Q56VP1	Pseudomonas_phage	55.8	5.6e-46
WP_003125072.1|4591925_4592174_-|coat	phage coat protein B	coat	Q56VP2	Pseudomonas_phage	92.7	2.0e-32
WP_003115979.1|4592186_4592438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003140508.1|4592559_4592994_-	hypothetical protein	NA	Q56VP5	Pseudomonas_phage	100.0	3.8e-63
WP_149586502.1|4593509_4593800_-	DUF5447 family protein	NA	Q56VP7	Pseudomonas_phage	95.8	4.8e-54
WP_019486373.1|4593803_4593962_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023086597.1|4593973_4594189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079393699.1|4594628_4595321_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149586503.1|4595418_4597317_+	DUF3696 domain-containing protein	NA	Q2P9X8	Enterobacteria_phage	38.4	2.3e-19
4617005:4617021	attR	CGCCGCCGCCAGCAGCA	NA	NA	NA	NA
