assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008195605.1_ASM819560v1	NZ_CP043332	Proteus mirabilis strain CRPM10 chromosome, complete genome	1	181111-181206	1	CRISPRCasFinder	no		DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	ATAGCTTAGAAAAATAAGTACTAA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|83aa|down_1|NZ_CP043332.1_181527_181776_-	NA|113aa|up_9|NZ_CP043332.1_169521_169860_+	PRK11027, PRK11027, hypothetical protein; Provisional	NA|511aa|up_8|NZ_CP043332.1_169907_171440_-	PRK09862, PRK09862, ATP-dependent protease	NA|34aa|up_7|NZ_CP043332.1_171884_171986_+	PRK10424, PRK10424, ilv operon leader peptide	NA|550aa|up_6|NZ_CP043332.1_172115_173765_+	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed	NA|93aa|up_5|NZ_CP043332.1_173761_174040_+	PRK11152, ilvM, acetolactate synthase 2 small subunit	NA|309aa|up_4|NZ_CP043332.1_174050_174977_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|617aa|up_3|NZ_CP043332.1_175049_176900_+	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional	NA|525aa|up_2|NZ_CP043332.1_176903_178478_+	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|296aa|up_1|NZ_CP043332.1_178463_179351_-	PRK11716, PRK11716, HTH-type transcriptional activator IlvY	NA|492aa|up_0|NZ_CP043332.1_179523_180999_+	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated	NA|90aa|down_0|NZ_CP043332.1_181257_181527_-	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|83aa|down_1|NZ_CP043332.1_181527_181776_-	NA	NA|674aa|down_2|NZ_CP043332.1_181948_183970_+	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional	NA|503aa|down_3|NZ_CP043332.1_184044_185553_-	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase	NA|433aa|down_4|NZ_CP043332.1_185556_186855_-	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional	NA|109aa|down_5|NZ_CP043332.1_186974_187301_+	PRK09381, trxA, thioredoxin TrxA	NA|420aa|down_6|NZ_CP043332.1_187862_189122_+	PRK09376, rho, transcription termination factor Rho; Provisional	NA|364aa|down_7|NZ_CP043332.1_189516_190608_+	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase	NA|353aa|down_8|NZ_CP043332.1_190631_191690_+	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein	NA|377aa|down_9|NZ_CP043332.1_191819_192950_+	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
GCF_008195605.1_ASM819560v1	NZ_CP043332	Proteus mirabilis strain CRPM10 chromosome, complete genome	2	1574149-1574264	2	CRISPRCasFinder	no		DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	ATGGAAACGTCGAAAGTGAGGGATC	25	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|125aa|up_6|NZ_CP043332.1_1570746_1571121_-,NA|61aa|up_5|NZ_CP043332.1_1571144_1571327_-,NA|68aa|up_4|NZ_CP043332.1_1571458_1571662_-,NA|153aa|up_1|NZ_CP043332.1_1572868_1573327_+,NA|132aa|down_1|NZ_CP043332.1_1575526_1575922_+,NA|60aa|down_5|NZ_CP043332.1_1578806_1578986_+	NA|60aa|up_9|NZ_CP043332.1_1569084_1569264_-	pfam15797, DUF4706, Domain of unknown function (DUF4706)	NA|166aa|up_8|NZ_CP043332.1_1569297_1569795_-	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional	NA|276aa|up_7|NZ_CP043332.1_1569853_1570681_-	pfam10065, DUF2303, Uncharacterized conserved protein (DUF2303)	NA|125aa|up_6|NZ_CP043332.1_1570746_1571121_-	NA	NA|61aa|up_5|NZ_CP043332.1_1571144_1571327_-	NA	NA|68aa|up_4|NZ_CP043332.1_1571458_1571662_-	NA	NA|230aa|up_3|NZ_CP043332.1_1571809_1572499_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|72aa|up_2|NZ_CP043332.1_1572596_1572812_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|153aa|up_1|NZ_CP043332.1_1572868_1573327_+	NA	NA|60aa|up_0|NZ_CP043332.1_1573584_1573764_+	pfam13973, DUF4222, Domain of unknown function (DUF4222)	NA|213aa|down_0|NZ_CP043332.1_1574891_1575530_+	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam)	NA|132aa|down_1|NZ_CP043332.1_1575526_1575922_+	NA	NA|268aa|down_2|NZ_CP043332.1_1576096_1576900_+	pfam04383, KilA-N, KilA-N domain	NA|342aa|down_3|NZ_CP043332.1_1576896_1577922_+	pfam06147, DUF968, Protein of unknown function (DUF968)	NA|227aa|down_4|NZ_CP043332.1_1577949_1578630_+	pfam06323, Phage_antiter_Q, Phage antitermination protein Q	NA|60aa|down_5|NZ_CP043332.1_1578806_1578986_+	NA	NA|341aa|down_6|NZ_CP043332.1_1579053_1580076_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|90aa|down_7|NZ_CP043332.1_1580337_1580607_+	pfam02516, STT3, Oligosaccharyl transferase STT3 subunit	NA|157aa|down_8|NZ_CP043332.1_1580606_1581077_+	cd16900, endolysin_R21-like, endolysin R21-like proteins	NA|154aa|down_9|NZ_CP043332.1_1581219_1581681_+	pfam03245, Phage_lysis, Bacteriophage Rz lysis protein
GCF_008195605.1_ASM819560v1	NZ_CP043332	Proteus mirabilis strain CRPM10 chromosome, complete genome	3	2625785-2626362	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCGTATACACGGGGAACAC,CGGTTCATCCCCGTATACACGGGGAACAC,CGGTTCATCCCCGTATACACGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,8	9	TypeI-E	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|221aa|up_9|NZ_CP043332.1_2614514_2615177_-	PRK11587, PRK11587, putative phosphatase; Provisional	NA|165aa|up_8|NZ_CP043332.1_2615211_2615706_-	PRK05445, PRK05445, YfbU family protein	NA|152aa|up_7|NZ_CP043332.1_2615846_2616302_-	PRK01816, PRK01816, hypothetical protein; Provisional	NA|401aa|up_6|NZ_CP043332.1_2616693_2617896_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|715aa|up_5|NZ_CP043332.1_2617973_2620118_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|48aa|up_4|NZ_CP043332.1_2620453_2620597_+	pfam01848, HOK_GEF, Hok/gef family	NA|48aa|up_3|NZ_CP043332.1_2620993_2621137_+	pfam01848, HOK_GEF, Hok/gef family	NA|48aa|up_2|NZ_CP043332.1_2621534_2621678_+	pfam01848, HOK_GEF, Hok/gef family	NA|800aa|up_1|NZ_CP043332.1_2621915_2624315_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|408aa|up_0|NZ_CP043332.1_2624392_2625616_-	PRK13340, PRK13340, alanine racemase; Reviewed	cas2|99aa|down_0|NZ_CP043332.1_2626420_2626717_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP043332.1_2626719_2627640_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|226aa|down_2|NZ_CP043332.1_2627640_2628318_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|246aa|down_3|NZ_CP043332.1_2628317_2629055_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|down_4|NZ_CP043332.1_2629067_2630102_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|200aa|down_5|NZ_CP043332.1_2630132_2630732_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|533aa|down_6|NZ_CP043332.1_2630706_2632305_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|898aa|down_7|NZ_CP043332.1_2632301_2634995_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|419aa|down_8|NZ_CP043332.1_2636131_2637388_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|96aa|down_9|NZ_CP043332.1_2637398_2637686_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)
GCF_008195605.1_ASM819560v1	NZ_CP043332	Proteus mirabilis strain CRPM10 chromosome, complete genome	4	2635241-2636001	2,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCGTGCATACGGGGAACAC,CGGTTCATCCCCGTGCATACGGGGAACAC,CGGTTCATCCCCGTGCATACGGGGAACAC	29,29,29	2	2	2635392-2635423|2635636-2635667	NZ_CP043332.1_1577523-1577492|NZ_CP043332.1_3093944-3093913	I-E:I-E:I-E	12,12,12	12	TypeI-E	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|800aa|up_9|NZ_CP043332.1_2621915_2624315_+	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|408aa|up_8|NZ_CP043332.1_2624392_2625616_-	PRK13340, PRK13340, alanine racemase; Reviewed	cas2|99aa|up_7|NZ_CP043332.1_2626420_2626717_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|up_6|NZ_CP043332.1_2626719_2627640_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|226aa|up_5|NZ_CP043332.1_2627640_2628318_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|246aa|up_4|NZ_CP043332.1_2628317_2629055_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|up_3|NZ_CP043332.1_2629067_2630102_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|200aa|up_2|NZ_CP043332.1_2630132_2630732_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|533aa|up_1|NZ_CP043332.1_2630706_2632305_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|898aa|up_0|NZ_CP043332.1_2632301_2634995_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|419aa|down_0|NZ_CP043332.1_2636131_2637388_-	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|96aa|down_1|NZ_CP043332.1_2637398_2637686_-	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|148aa|down_2|NZ_CP043332.1_2637715_2638159_-	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|349aa|down_3|NZ_CP043332.1_2638385_2639432_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|181aa|down_4|NZ_CP043332.1_2639428_2639971_-	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional	NA|205aa|down_5|NZ_CP043332.1_2640167_2640782_+	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional	NA|302aa|down_6|NZ_CP043332.1_2640846_2641752_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|194aa|down_7|NZ_CP043332.1_2641771_2642353_-	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|506aa|down_8|NZ_CP043332.1_2642474_2643992_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|down_9|NZ_CP043332.1_2644022_2644514_-	PRK10845, PRK10845, colicin V production protein; Provisional
GCF_008195605.1_ASM819560v1	NZ_CP043332	Proteus mirabilis strain CRPM10 chromosome, complete genome	5	2902155-2902297	5	CRISPRCasFinder	no		DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGTGATATCAATTTCACAGGTGG	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,c2c9_V-U4,cas3,DinG,c2c10_CAS-V-U3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|240aa|up_6|NZ_CP043332.1_2892766_2893486_-,NA|76aa|up_0|NZ_CP043332.1_2900238_2900466_+,NA	NA|219aa|up_9|NZ_CP043332.1_2889877_2890534_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|300aa|up_8|NZ_CP043332.1_2890694_2891594_+	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|267aa|up_7|NZ_CP043332.1_2891969_2892770_-	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system	NA|240aa|up_6|NZ_CP043332.1_2892766_2893486_-	NA	NA|245aa|up_5|NZ_CP043332.1_2893709_2894444_-	PRK11087, PRK11087, oxidative stress defense protein; Provisional	NA|208aa|up_4|NZ_CP043332.1_2894534_2895158_-	PRK09304, PRK09304, arginine exporter ArgO	NA|287aa|up_3|NZ_CP043332.1_2895326_2896187_-	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS	NA|124aa|up_2|NZ_CP043332.1_2896278_2896650_-	PRK05248, PRK05248, hypothetical protein; Provisional	NA|866aa|up_1|NZ_CP043332.1_2896820_2899418_-	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|76aa|up_0|NZ_CP043332.1_2900238_2900466_+	NA	NA|476aa|down_0|NZ_CP043332.1_2914734_2916162_-	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|624aa|down_1|NZ_CP043332.1_2916363_2918235_-	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated	NA|889aa|down_2|NZ_CP043332.1_2918247_2920914_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|257aa|down_3|NZ_CP043332.1_2921077_2921848_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|181aa|down_4|NZ_CP043332.1_2922174_2922717_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|148aa|down_5|NZ_CP043332.1_2922927_2923371_+	PRK10574, PRK10574, putative major pilin subunit; Provisional	NA|368aa|down_6|NZ_CP043332.1_2923470_2924574_+	PRK10436, PRK10436, hypothetical protein; Provisional	NA|205aa|down_7|NZ_CP043332.1_2926046_2926661_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|251aa|down_8|NZ_CP043332.1_2926663_2927416_+	PRK05287, PRK05287, cell division protein ZapD	NA|72aa|down_9|NZ_CP043332.1_2927468_2927684_+	PRK00418, PRK00418, DNA gyrase inhibitor YacG
