assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008121495.1_ASM812149v1	NZ_CP043051	[Ruminococcus] gnavus ATCC 29149 strain JCM6515 chromosome, complete genome	1	404474-404563	1	CRISPRCasFinder	no		RT,cas3HD,csa3,DEDDh,cas3,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas14j	Orphan	TCTGCTGCGTCCTCTGCTTTTTCC	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3HD,csa3,DEDDh,cas3,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas14j	NA|141aa|up_5|NZ_CP043051.1_400168_400591_-,NA	NA|174aa|up_9|NZ_CP043051.1_394206_394728_+	pfam04892, VanZ, VanZ like family	NA|337aa|up_8|NZ_CP043051.1_394668_395679_-	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only]	NA|412aa|up_7|NZ_CP043051.1_395679_396915_-	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa	NA|866aa|up_6|NZ_CP043051.1_396911_399509_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|141aa|up_5|NZ_CP043051.1_400168_400591_-	NA	NA|200aa|up_4|NZ_CP043051.1_400649_401249_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|410aa|up_3|NZ_CP043051.1_401376_402606_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	NA|141aa|up_2|NZ_CP043051.1_402681_403104_-	TIGR02481, hemeryth_dom, hemerythrin-like metal-binding domain	NA|279aa|up_1|NZ_CP043051.1_403115_403952_-	PRK00241, nudC, NAD(+) diphosphatase	NA|161aa|up_0|NZ_CP043051.1_403953_404436_-	pfam01252, Peptidase_A8, Signal peptidase (SPase) II	NA|569aa|down_0|NZ_CP043051.1_405230_406937_+	cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins	NA|418aa|down_1|NZ_CP043051.1_406972_408226_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|479aa|down_2|NZ_CP043051.1_408393_409830_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|656aa|down_3|NZ_CP043051.1_409928_411896_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|253aa|down_4|NZ_CP043051.1_411916_412675_-	PRK10475, PRK10475, 23S rRNA pseudouridine(2604) synthase RluF	NA|387aa|down_5|NZ_CP043051.1_412667_413828_-	cd14439, AlgX_N_like, N-terminal catalytic domain of putative alginate O-acetyltranferase and similar proteins	NA|471aa|down_6|NZ_CP043051.1_413836_415249_-	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]	NA|164aa|down_7|NZ_CP043051.1_415269_415761_-	pfam14270, DUF4358, Domain of unknown function (DUF4358)	NA|253aa|down_8|NZ_CP043051.1_415757_416516_-	cd01841, NnaC_like, NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases	NA|223aa|down_9|NZ_CP043051.1_416584_417253_-	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]
GCF_008121495.1_ASM812149v1	NZ_CP043051	[Ruminococcus] gnavus ATCC 29149 strain JCM6515 chromosome, complete genome	2	2292635-2294523	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	RT,cas3HD,csa3,DEDDh,cas3,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas14j	Type I-C,Type I-U, Type I-U?	GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT,GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT,GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT	32,32,32	4	4	2292667-2292704|2293532-2293566|2293599-2293635|2294193-2294225	NZ_CP043051.1_2235116-2235079|NZ_CP043051.1_2229381-2229347|NZ_CP043051.1_2239569-2239605|NZ_CP043051.1_2246899-2246931	I-C:I-C:I-C	27,28,28	28	TypeI-C,TypeI-U,TypeI-U?	RT,cas3HD,csa3,DEDDh,cas3,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas14j	NA|147aa|up_6|NZ_CP043051.1_2286672_2287113_+,NA|61aa|down_5|NZ_CP043051.1_2301664_2301847_+,NA|519aa|down_6|NZ_CP043051.1_2301919_2303476_+,NA|59aa|down_9|NZ_CP043051.1_2306640_2306817_+	NA|563aa|up_9|NZ_CP043051.1_2281509_2283198_+	smart00857, Resolvase, Resolvase, N terminal domain	cas3|722aa|up_8|NZ_CP043051.1_2283721_2285887_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|156aa|up_7|NZ_CP043051.1_2286221_2286689_+	pfam13151, DUF3990, Protein of unknown function (DUF3990)	NA|147aa|up_6|NZ_CP043051.1_2286672_2287113_+	NA	cas5|221aa|up_5|NZ_CP043051.1_2287138_2287801_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|585aa|up_4|NZ_CP043051.1_2287797_2289552_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|304aa|up_3|NZ_CP043051.1_2289552_2290464_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|221aa|up_2|NZ_CP043051.1_2290463_2291126_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|up_1|NZ_CP043051.1_2291125_2292157_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP043051.1_2292169_2292460_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|92aa|down_0|NZ_CP043051.1_2294526_2294802_+	pfam17202, sCache_3_3, Single cache domain 3	NA|111aa|down_1|NZ_CP043051.1_2294788_2295121_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|313aa|down_2|NZ_CP043051.1_2296019_2296958_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|169aa|down_3|NZ_CP043051.1_2297000_2297507_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|415aa|down_4|NZ_CP043051.1_2299471_2300716_-	pfam00665, rve, Integrase core domain	NA|61aa|down_5|NZ_CP043051.1_2301664_2301847_+	NA	NA|519aa|down_6|NZ_CP043051.1_2301919_2303476_+	NA	NA|386aa|down_7|NZ_CP043051.1_2303611_2304769_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|297aa|down_8|NZ_CP043051.1_2304935_2305826_+	COG0348, NapH, Polyferredoxin [Energy production and conversion]	NA|59aa|down_9|NZ_CP043051.1_2306640_2306817_+	NA
GCF_008121495.1_ASM812149v1	NZ_CP043051	[Ruminococcus] gnavus ATCC 29149 strain JCM6515 chromosome, complete genome	3	3357932-3358018	3	CRISPRCasFinder	no		RT,cas3HD,csa3,DEDDh,cas3,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas14j	Orphan	CTCGCCGGACGATCCTGACGGGAT	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3HD,csa3,DEDDh,cas3,PD-DExK,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,cas14j	NA,NA	NA|261aa|up_9|NZ_CP043051.1_3345049_3345832_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|307aa|up_8|NZ_CP043051.1_3345912_3346833_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|442aa|up_7|NZ_CP043051.1_3346921_3348247_-	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold	NA|419aa|up_6|NZ_CP043051.1_3348472_3349729_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|357aa|up_5|NZ_CP043051.1_3349725_3350796_-	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|584aa|up_4|NZ_CP043051.1_3350783_3352535_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|300aa|up_3|NZ_CP043051.1_3352543_3353443_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|307aa|up_2|NZ_CP043051.1_3353445_3354366_-	PRK00130, truB, tRNA pseudouridine synthase B; Provisional	NA|320aa|up_1|NZ_CP043051.1_3354387_3355347_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|124aa|up_0|NZ_CP043051.1_3355353_3355725_-	pfam02033, RBFA, Ribosome-binding factor A	NA|108aa|down_0|NZ_CP043051.1_3358318_3358642_-	PRK07714, PRK07714, YlxQ family RNA-binding protein	NA|93aa|down_1|NZ_CP043051.1_3358628_3358907_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|398aa|down_2|NZ_CP043051.1_3358929_3360123_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|156aa|down_3|NZ_CP043051.1_3360142_3360610_-	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|748aa|down_4|NZ_CP043051.1_3361015_3363259_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|641aa|down_5|NZ_CP043051.1_3363288_3365211_-	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|390aa|down_6|NZ_CP043051.1_3365308_3366478_-	pfam07454, SpoIIP, Stage II sporulation protein P (SpoIIP)	NA|326aa|down_7|NZ_CP043051.1_3366547_3367525_-	PRK12362, PRK12362, germination protease; Provisional	NA|88aa|down_8|NZ_CP043051.1_3367714_3367978_+	pfam01649, Ribosomal_S20p, Ribosomal protein S20	NA|214aa|down_9|NZ_CP043051.1_3368067_3368709_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated
