assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008087605.1_ASM808760v1	NZ_CP042983	Histophilus somni strain UOC-KLM-ATR-01 chromosome, complete genome	1	353049-353136	1	CRISPRCasFinder	no		cas3,cas14j,DEDDh,DinG	Orphan	CGGTGCATGGTGCATGCTTCKATA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,DEDDh,DinG	NA,NA	NA|444aa|up_9|NZ_CP042983.1_344929_346261_+	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO	NA|411aa|up_8|NZ_CP042983.1_346352_347585_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|286aa|up_7|NZ_CP042983.1_347586_348444_+	COG2861, COG2861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|151aa|up_6|NZ_CP042983.1_348498_348951_-	PRK11179, PRK11179, DNA-binding transcriptional regulator AsnC; Provisional	NA|331aa|up_5|NZ_CP042983.1_349134_350127_+	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism]	NA|241aa|up_4|NZ_CP042983.1_350243_350966_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|126aa|up_3|NZ_CP042983.1_351217_351595_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|109aa|up_2|NZ_CP042983.1_351581_351908_+	PRK02801, PRK02801, primosomal replication protein N; Provisional	NA|76aa|up_1|NZ_CP042983.1_351920_352148_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|150aa|up_0|NZ_CP042983.1_352166_352616_+	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|396aa|down_0|NZ_CP042983.1_353163_354351_+	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|297aa|down_1|NZ_CP042983.1_354613_355504_+	COG2958, COG2958, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1110aa|down_2|NZ_CP042983.1_355507_358837_+	cd17252, RMtype1_S_EcoKI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|192aa|down_3|NZ_CP042983.1_358839_359415_+	cd17260, RMtype1_S_EcoEI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|386aa|down_4|NZ_CP042983.1_359984_361142_+	COG0387, ChaA, Ca2+/H+ antiporter [Inorganic ion transport and metabolism]	NA|335aa|down_5|NZ_CP042983.1_361213_362218_+	TIGR00698, UPF0324_membrane_protein_HI_1643, conserved hypothetical integral membrane protein	NA|369aa|down_6|NZ_CP042983.1_362234_363341_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|155aa|down_7|NZ_CP042983.1_363362_363827_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|644aa|down_8|NZ_CP042983.1_363837_365769_+	COG1444, COG1444, Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]	NA|528aa|down_9|NZ_CP042983.1_366119_367703_+	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
GCF_008087605.1_ASM808760v1	NZ_CP042983	Histophilus somni strain UOC-KLM-ATR-01 chromosome, complete genome	2	734185-734273	2	CRISPRCasFinder	no		cas3,cas14j,DEDDh,DinG	Orphan	CCACATTTGCCTTCGGCAGATTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,DEDDh,DinG	NA|286aa|up_9|NZ_CP042983.1_714468_715326_-,NA	NA|286aa|up_9|NZ_CP042983.1_714468_715326_-	NA	NA|189aa|up_8|NZ_CP042983.1_724803_725370_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|291aa|up_7|NZ_CP042983.1_725460_726333_-	COG2833, COG2833, Uncharacterized protein conserved in bacteria [Function unknown]	NA|114aa|up_6|NZ_CP042983.1_726624_726966_-	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|577aa|up_5|NZ_CP042983.1_727070_728801_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|588aa|up_4|NZ_CP042983.1_728800_730564_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|318aa|up_3|NZ_CP042983.1_730629_731583_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|247aa|up_2|NZ_CP042983.1_731711_732452_-	PRK11145, pflA, pyruvate formate lyase 1-activating protein	NA|235aa|up_1|NZ_CP042983.1_732516_733221_-	COG3219, COG3219, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_0|NZ_CP042983.1_733205_734126_-	COG3220, COG3220, Uncharacterized protein conserved in bacteria [Function unknown]	NA|153aa|down_0|NZ_CP042983.1_734427_734886_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|775aa|down_1|NZ_CP042983.1_735020_737345_-	cd01678, PFL1, Pyruvate formate lyase 1	NA|284aa|down_2|NZ_CP042983.1_737439_738291_-	TIGR04060, formate_focA, formate transporter FocA	NA|117aa|down_3|NZ_CP042983.1_738534_738885_+	PRK10687, PRK10687, purine nucleoside phosphoramidase; Provisional	NA|119aa|down_4|NZ_CP042983.1_738884_739241_+	cd09030, DUF1425, Putative periplasmic lipoprotein	NA|349aa|down_5|NZ_CP042983.1_739247_740294_+	PRK05337, PRK05337, beta-hexosaminidase; Provisional	NA|173aa|down_6|NZ_CP042983.1_740322_740841_+	COG4283, COG4283, Uncharacterized conserved protein [Function unknown]	NA|295aa|down_7|NZ_CP042983.1_741051_741936_+	PRK09432, metF, methylenetetrahydrofolate reductase	NA|155aa|down_8|NZ_CP042983.1_742021_742486_-	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional	NA|944aa|down_9|NZ_CP042983.1_742664_745496_+	PRK00349, uvrA, excinuclease ABC subunit UvrA
GCF_008087605.1_ASM808760v1	NZ_CP042983	Histophilus somni strain UOC-KLM-ATR-01 chromosome, complete genome	3	1472019-1472117	3	CRISPRCasFinder	no	cas14j	cas3,cas14j,DEDDh,DinG	Unclear	AGCCTACAGCCTACAGCCTAGGCTAACGCCTT	32	0	0	NA	NA	NA	1	1	TypeV	cas3,cas14j,DEDDh,DinG	NA|185aa|up_8|NZ_CP042983.1_1464320_1464875_-,NA|78aa|up_4|NZ_CP042983.1_1468004_1468238_+,NA|110aa|up_3|NZ_CP042983.1_1468243_1468573_+,NA|181aa|down_1|NZ_CP042983.1_1478752_1479295_+	NA|299aa|up_9|NZ_CP042983.1_1463409_1464306_-	PRK09509, fieF, CDF family cation-efflux pump FieF	NA|185aa|up_8|NZ_CP042983.1_1464320_1464875_-	NA	NA|259aa|up_7|NZ_CP042983.1_1464871_1465648_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|224aa|up_6|NZ_CP042983.1_1465663_1466335_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	cas14j|379aa|up_5|NZ_CP042983.1_1466631_1467768_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|78aa|up_4|NZ_CP042983.1_1468004_1468238_+	NA	NA|110aa|up_3|NZ_CP042983.1_1468243_1468573_+	NA	NA|73aa|up_2|NZ_CP042983.1_1468677_1468896_+	cd16892, LT_VirB1-like, VirB1-like subfamily	NA|128aa|up_1|NZ_CP042983.1_1468912_1469296_+	PRK11127, PRK11127, autonomous glycyl radical cofactor GrcA; Provisional	NA|689aa|up_0|NZ_CP042983.1_1469399_1471466_-	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|2148aa|down_0|NZ_CP042983.1_1472382_1478826_+	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll	NA|181aa|down_1|NZ_CP042983.1_1478752_1479295_+	NA	NA|676aa|down_2|NZ_CP042983.1_1479321_1481349_+	pfam03895, YadA_anchor, YadA-like membrane anchor domain	NA|904aa|down_3|NZ_CP042983.1_1481436_1484148_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|159aa|down_4|NZ_CP042983.1_1484149_1484626_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|459aa|down_5|NZ_CP042983.1_1484726_1486103_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|348aa|down_6|NZ_CP042983.1_1486112_1487156_-	COG3025, COG3025, Uncharacterized conserved protein [Function unknown]	NA|227aa|down_7|NZ_CP042983.1_1487298_1487979_+	TIGR00153, UPF0111_protein_MTH_1689, TIGR00153 family protein	NA|421aa|down_8|NZ_CP042983.1_1488005_1489268_+	pfam01384, PHO4, Phosphate transporter family	NA|204aa|down_9|NZ_CP042983.1_1489372_1489984_+	COG3103, COG3103, SH3 domain protein [Signal transduction mechanisms]
GCF_008087605.1_ASM808760v1	NZ_CP042983	Histophilus somni strain UOC-KLM-ATR-01 chromosome, complete genome	4	1683388-1683483	4	CRISPRCasFinder	no		cas3,cas14j,DEDDh,DinG	Orphan	TTACAATGACAAACATTATTTTACA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,DEDDh,DinG	NA,NA|178aa|down_1|NZ_CP042983.1_1684421_1684955_-,NA|106aa|down_3|NZ_CP042983.1_1686181_1686499_-,NA|95aa|down_4|NZ_CP042983.1_1687421_1687706_-,NA|660aa|down_6|NZ_CP042983.1_1690484_1692464_-,NA|137aa|down_7|NZ_CP042983.1_1692534_1692945_-,NA|130aa|down_8|NZ_CP042983.1_1693187_1693577_-	NA|113aa|up_9|NZ_CP042983.1_1674795_1675134_-	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|195aa|up_8|NZ_CP042983.1_1675176_1675761_-	PRK09417, mogA, molybdenum cofactor biosynthesis protein MogA; Provisional	NA|212aa|up_7|NZ_CP042983.1_1675821_1676457_-	PRK00015, rnhB, ribonuclease HII; Validated	NA|390aa|up_6|NZ_CP042983.1_1676457_1677627_-	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed	NA|263aa|up_5|NZ_CP042983.1_1677708_1678497_-	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA|152aa|up_4|NZ_CP042983.1_1678510_1678966_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|296aa|up_3|NZ_CP042983.1_1679049_1679937_-	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|445aa|up_2|NZ_CP042983.1_1680046_1681381_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|277aa|up_1|NZ_CP042983.1_1681472_1682303_-	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|287aa|up_0|NZ_CP042983.1_1682369_1683230_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|209aa|down_0|NZ_CP042983.1_1683795_1684422_-	PRK11189, PRK11189, lipoprotein NlpI; Provisional	NA|178aa|down_1|NZ_CP042983.1_1684421_1684955_-	NA	NA|402aa|down_2|NZ_CP042983.1_1684973_1686179_-	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]	NA|106aa|down_3|NZ_CP042983.1_1686181_1686499_-	NA	NA|95aa|down_4|NZ_CP042983.1_1687421_1687706_-	NA	NA|205aa|down_5|NZ_CP042983.1_1687698_1688313_-	pfam14301, DUF4376, Domain of unknown function (DUF4376)	NA|660aa|down_6|NZ_CP042983.1_1690484_1692464_-	NA	NA|137aa|down_7|NZ_CP042983.1_1692534_1692945_-	NA	NA|130aa|down_8|NZ_CP042983.1_1693187_1693577_-	NA	NA|149aa|down_9|NZ_CP042983.1_1693573_1694020_-	pfam02037, SAP, SAP domain
