assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	1	919906-920067	1	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Orphan	TACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAATTT	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA	NA|265aa|up_9|NZ_CP040927.1_902377_903172_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|188aa|up_8|NZ_CP040927.1_903817_904381_+	PRK10557, PRK10557, prepilin peptidase-dependent protein	NA|136aa|up_7|NZ_CP040927.1_904377_904785_+	PRK11521, PRK11521, DUF2509 family protein	NA|108aa|up_6|NZ_CP040927.1_904769_905093_+	PRK10332, PRK10332, prepilin-type N-terminal cleavage/methylation domain-containing protein	NA|1123aa|up_5|NZ_CP040927.1_905105_908474_+	PRK11069, recC, exodeoxyribonuclease V subunit gamma	NA|963aa|up_4|NZ_CP040927.1_908649_911538_+	PRK15101, PRK15101, protease3; Provisional	NA|1181aa|up_3|NZ_CP040927.1_911530_915073_+	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|609aa|up_2|NZ_CP040927.1_915072_916899_+	PRK10875, recD, exodeoxyribonuclease V subunit alpha	NA|444aa|up_1|NZ_CP040927.1_916960_918292_-	PRK05279, PRK05279, N-acetylglutamate synthase; Validated	NA|418aa|up_0|NZ_CP040927.1_918523_919777_+	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA	NA|366aa|down_0|NZ_CP040927.1_920355_921453_+	PRK11162, mltA, murein transglycosylase A; Provisional	NA|269aa|down_1|NZ_CP040927.1_921691_922498_+	PRK15116, PRK15116, sulfur acceptor protein CsdL; Provisional	NA|148aa|down_2|NZ_CP040927.1_922548_922992_-	PRK15019, PRK15019, cysteine desulfurase sulfur acceptor subunit CsdE	NA|402aa|down_3|NZ_CP040927.1_922991_924197_-	PRK10874, PRK10874, cysteine desulfurase CsdA	NA|76aa|down_4|NZ_CP040927.1_924388_924616_+	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|306aa|down_5|NZ_CP040927.1_924966_925884_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|132aa|down_6|NZ_CP040927.1_925902_926298_+	PRK10873, PRK10873, hypothetical protein; Provisional	NA|367aa|down_7|NZ_CP040927.1_926290_927391_+	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional	NA|244aa|down_8|NZ_CP040927.1_927434_928166_-	PRK10411, PRK10411, L-fucose operon activator	NA|141aa|down_9|NZ_CP040927.1_928223_928646_-	PRK15420, fucU, L-fucose mutarotase; Provisional
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	2	963128-964480	1,2,1,2,3,2	PILER-CR,CRISPRCasFinder,CRT,CRT,CRISPRCasFinder,PILER-CR	no	cas3	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E:I-E	21,20,21,21,20,21	21	Unclear	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA	NA|919aa|up_9|NZ_CP040927.1_949720_952477_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP040927.1_952533_953835_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP040927.1_953882_956117_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP040927.1_956194_956443_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP040927.1_956442_956778_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP040927.1_956848_957640_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP040927.1_957867_959505_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP040927.1_959592_960891_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP040927.1_960950_961823_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP040927.1_962116_962788_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP040927.1_965119_966598_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP040927.1_966624_967902_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP040927.1_968220_969006_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP040927.1_969075_970530_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP040927.1_970623_971961_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP040927.1_971938_972718_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP040927.1_972714_973575_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP040927.1_973722_974298_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP040927.1_974314_974575_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|122aa|down_9|NZ_CP040927.1_975914_976280_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	3	990030-991400	3,4,3	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	20,22,22	22	TypeI-E	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA	NA|571aa|up_9|NZ_CP040927.1_978394_980107_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP040927.1_980180_980915_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP040927.1_981273_983940_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|451aa|up_6|NZ_CP040927.1_984354_985707_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP040927.1_985855_986338_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP040927.1_986350_987442_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP040927.1_987444_988119_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP040927.1_988105_988705_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP040927.1_988720_989638_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP040927.1_989639_989924_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP040927.1_991420_992458_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP040927.1_992709_993618_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP040927.1_993619_995047_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP040927.1_995046_995652_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP040927.1_995701_996025_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP040927.1_996218_996530_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP040927.1_996548_997259_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP040927.1_997258_997738_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP040927.1_997734_998784_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP040927.1_998764_999526_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	4	2158215-2158338	5	CRISPRCasFinder	no	DEDDh	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA|30aa|down_7|NZ_CP040927.1_2167234_2167324_+	NA|79aa|up_9|NZ_CP040927.1_2147122_2147359_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_8|NZ_CP040927.1_2147669_2149082_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_7|NZ_CP040927.1_2149638_2149848_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_6|NZ_CP040927.1_2150302_2150929_+	PRK09898, PRK09898, ferredoxin-like protein	NA|216aa|up_5|NZ_CP040927.1_2153055_2153703_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP040927.1_2153766_2154435_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP040927.1_2154431_2155217_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP040927.1_2155220_2156033_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP040927.1_2156044_2157649_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP040927.1_2157774_2158080_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP040927.1_2158652_2159909_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP040927.1_2159949_2161323_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP040927.1_2161537_2162179_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP040927.1_2162218_2163367_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP040927.1_2163657_2164869_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP040927.1_2164981_2165914_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP040927.1_2165910_2166936_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP040927.1_2167234_2167324_+	NA	NA|390aa|down_8|NZ_CP040927.1_2167489_2168659_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP040927.1_2168893_2169475_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	5	2842884-2842975	6	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA|70aa|up_9|NZ_CP040927.1_2832003_2832213_-,NA|60aa|up_6|NZ_CP040927.1_2837086_2837266_-,NA	NA|70aa|up_9|NZ_CP040927.1_2832003_2832213_-	NA	NA|1321aa|up_8|NZ_CP040927.1_2832267_2836230_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP040927.1_2836269_2836908_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|60aa|up_6|NZ_CP040927.1_2837086_2837266_-	NA	NA|364aa|up_5|NZ_CP040927.1_2837195_2838287_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_4|NZ_CP040927.1_2838286_2838979_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_3|NZ_CP040927.1_2838990_2839377_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_2|NZ_CP040927.1_2839384_2840185_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|165aa|up_1|NZ_CP040927.1_2840752_2841247_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP040927.1_2841267_2842596_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP040927.1_2843398_2843995_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP040927.1_2844015_2844243_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP040927.1_2844280_2845522_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP040927.1_2847330_2848251_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP040927.1_2848250_2848556_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP040927.1_2848707_2849307_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP040927.1_2849303_2851850_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP040927.1_2851849_2853022_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP040927.1_2853151_2853844_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP040927.1_2853816_2854845_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	6	2984706-2984789	7	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Orphan	ATCTGCCTGTACGGCAGTGAACT	23	0	0	NA	NA	I-F	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA	NA|431aa|up_9|NZ_CP040927.1_2969607_2970900_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP040927.1_2970990_2972334_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP040927.1_2972344_2972956_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1343aa|up_6|NZ_CP040927.1_2973110_2977139_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP040927.1_2977273_2977768_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP040927.1_2978312_2979278_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP040927.1_2979400_2981167_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP040927.1_2981167_2982889_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP040927.1_2982930_2983635_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP040927.1_2983919_2984138_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP040927.1_2985001_2987278_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP040927.1_2987308_2987629_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP040927.1_2987951_2988176_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP040927.1_2988248_2990195_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP040927.1_2990191_2991307_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP040927.1_2991457_2992414_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP040927.1_2992410_2994069_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP040927.1_2994494_2995190_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP040927.1_2995684_2996584_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP040927.1_2996727_2998380_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	7	3106172-3106316	8	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA	NA|330aa|up_9|NZ_CP040927.1_3094070_3095060_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP040927.1_3095456_3096365_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP040927.1_3096556_3098578_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP040927.1_3099156_3099834_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP040927.1_3099826_3100582_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP040927.1_3100568_3101723_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP040927.1_3101719_3102760_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP040927.1_3102846_3104136_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP040927.1_3104194_3104671_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP040927.1_3104822_3106106_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP040927.1_3106339_3108601_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP040927.1_3108783_3110217_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP040927.1_3110292_3111345_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP040927.1_3111528_3112482_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP040927.1_3112522_3113518_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP040927.1_3113672_3114491_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP040927.1_3114491_3115550_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP040927.1_3115552_3116242_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP040927.1_3116241_3117015_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP040927.1_3117181_3117331_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	8	3339514-3339610	9	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA	NA|172aa|up_9|NZ_CP040927.1_3329556_3330072_-	PRK09934, PRK09934, fimbriae assembly protein	NA|347aa|up_8|NZ_CP040927.1_3330082_3331123_-	PRK15199, fimH, type 1 fimbrin D-mannose specific adhesin FimH	NA|289aa|up_7|NZ_CP040927.1_3333234_3334101_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP040927.1_3334102_3334315_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP040927.1_3334422_3334944_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP040927.1_3334979_3336365_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP040927.1_3336538_3337033_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP040927.1_3337035_3337758_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP040927.1_3337875_3338385_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP040927.1_3338381_3339449_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP040927.1_3339643_3340537_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP040927.1_3340533_3341349_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP040927.1_3341359_3342619_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP040927.1_3342628_3344296_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP040927.1_3344612_3345662_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP040927.1_3345683_3346919_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP040927.1_3346929_3347715_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|382aa|down_7|NZ_CP040927.1_3347942_3349088_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP040927.1_3349109_3350411_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP040927.1_3350467_3351829_-	PRK08044, PRK08044, allantoinase AllB
GCF_008080655.1_ASM808065v1	NZ_CP040927	Escherichia coli strain YY76-1 chromosome, complete genome	9	3479739-3479883	10	CRISPRCasFinder	no		c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,WYL,DinG	NA,NA|28aa|down_2|NZ_CP040927.1_3481928_3482012_-	NA|357aa|up_9|NZ_CP040927.1_3464877_3465948_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP040927.1_3466040_3466622_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP040927.1_3466626_3468444_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP040927.1_3468599_3469973_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP040927.1_3470048_3471368_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP040927.1_3471774_3473070_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP040927.1_3473127_3473817_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP040927.1_3474006_3475209_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP040927.1_3475205_3478352_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP040927.1_3478477_3479662_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP040927.1_3479906_3480815_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP040927.1_3480939_3481851_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP040927.1_3481928_3482012_-	NA	NA|95aa|down_3|NZ_CP040927.1_3482497_3482782_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP040927.1_3482853_3483531_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP040927.1_3483788_3483980_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP040927.1_3484029_3484554_-	PRK03731, aroL, shikimate kinase AroL	NA|155aa|down_7|NZ_CP040927.1_3484730_3485195_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP040927.1_3485314_3486124_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP040927.1_3486140_3487256_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
