The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	93310	148780	2026419	transposase,protease,tRNA	Bacillus_phage(23.53%)	46	NA	NA
WP_147656446.1|93310_94033_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_147656448.1|94050_94266_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147656450.1|94280_95108_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_147656452.1|95288_95660_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010620015.1|95792_98507_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_010620016.1|98554_99325_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_147656454.1|99490_100147_+	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	47.3	1.5e-47
WP_147656456.1|100200_101579_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	40.8	5.4e-47
WP_010620019.1|101643_102147_-	universal stress protein	NA	NA	NA	NA	NA
WP_147656458.1|102181_103585_-	dipeptidase PepV	NA	NA	NA	NA	NA
WP_147656460.1|103702_104533_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_147656462.1|104574_106239_-	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_133278345.1|106442_107315_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_147656464.1|107504_108722_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	44.8	1.7e-89
WP_010620024.1|108983_111404_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	69.1	0.0e+00
WP_076621474.1|111788_112460_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_033445234.1|112560_114054_-	MFS transporter	NA	S4TR35	Salmonella_phage	23.4	7.8e-07
WP_010620027.1|114110_115304_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	68.6	4.4e-146
WP_010620028.1|115519_116239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029327561.1|116265_116541_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010620031.1|117189_117510_+	heavy metal-binding domain-containing protein	NA	M4STD1	Rhodobacter_phage	35.6	7.0e-06
WP_029327562.1|117733_118252_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	41.4	5.2e-27
WP_147656466.1|118275_120597_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	32.8	1.3e-77
WP_010620034.1|120648_121587_-	ribonuclease Z	NA	NA	NA	NA	NA
WP_010620036.1|122006_122750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147656468.1|122831_124209_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	41.2	3.2e-47
WP_147656470.1|124255_126178_-	acyltransferase family protein	NA	A0A1R3Y5Q6	Salmonella_virus	29.8	2.3e-27
WP_010620038.1|126222_127521_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_147656472.1|127613_129404_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_147656474.1|129531_130278_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	1.0e-31
WP_010620041.1|130267_131740_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA	NA
WP_147656475.1|132123_133503_-	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010620044.1|133492_134791_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_010620045.1|134984_135284_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	A0A1S7FYY8	Listeria_phage	45.0	9.4e-21
WP_029327563.1|135273_135879_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_010620047.1|135973_137224_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.7	3.8e-140
WP_010620048.1|137403_138720_-	trigger factor	NA	NA	NA	NA	NA
WP_010620049.1|138943_140131_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	9.5e-32
WP_010620050.1|140420_141350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147656477.1|141402_143142_-	RNase J family beta-CASP ribonuclease	NA	NA	NA	NA	NA
WP_010620052.1|143368_143638_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_147656479.1|143920_144184_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_147656481.1|144220_145255_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_147656483.1|145254_147219_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	30.2	1.2e-28
WP_147656485.1|147422_147911_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_133278299.1|147853_148780_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.7	1.6e-42
>prophage 2
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	504401	566007	2026419	transposase,protease,holin	Bacillus_phage(11.11%)	59	NA	NA
WP_010619462.1|504401_505079_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_147656706.1|505106_508151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147656708.1|508204_509227_-	DUF916 domain-containing protein	NA	NA	NA	NA	NA
WP_147656710.1|509650_510652_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010619458.1|510648_511548_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_147656712.1|511540_512311_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	27.5	3.0e-10
WP_147656720.1|512365_513553_-	MFS transporter	NA	NA	NA	NA	NA
WP_147656722.1|513879_514752_-	NAD-binding protein	NA	NA	NA	NA	NA
WP_010619454.1|514849_515167_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	38.8	9.3e-19
WP_010619453.1|515168_515924_-	TerC family protein	NA	A0A068EP98	Bacillus_phage	44.2	2.6e-43
WP_147656724.1|515992_516607_-	N-acetylmuramidase	NA	A0A249Y0X5	Enterococcus_phage	38.7	4.3e-20
WP_147656727.1|516703_517705_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_010620861.1|518058_519297_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.2	4.0e-81
WP_147656729.1|519535_520444_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_010619449.1|520470_520728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147656731.1|520874_523634_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_033445195.1|523817_524291_+	hydrolase	NA	A0A217EQL1	Bacillus_phage	35.8	1.5e-09
WP_010619446.1|524314_524770_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010619445.1|524832_525492_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010619444.1|525690_527829_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	47.8	2.9e-164
WP_147656733.1|527878_529162_-|transposase	ISL3 family transposase	transposase	A0A2R2ZGN7	Clostridioides_phage	21.8	5.9e-11
WP_010619443.1|529363_530368_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	28.6	1.2e-19
WP_010619442.1|530384_531440_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_147656735.1|531592_532552_+	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_147656737.1|532608_533409_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_033445190.1|533414_534248_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010619438.1|534247_535516_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	28.2	1.7e-18
WP_010619436.1|535851_536418_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_147656739.1|536433_537873_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SJ29	Klosneuvirus	28.7	1.1e-13
WP_010619434.1|537869_538526_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_133278372.1|538588_538948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147656741.1|539035_539602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147656743.1|539798_540368_-	DUF1175 family protein	NA	D2KRB9	Lactobacillus_phage	39.4	2.6e-11
WP_010619430.1|540625_540817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010619429.1|540898_541246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010619428.1|541265_542432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010619427.1|542512_543484_-	asparaginase	NA	NA	NA	NA	NA
WP_147656745.1|543790_545152_+	purine permease	NA	Q9KX94	Enterobacteria_phage	27.7	1.7e-32
WP_010619425.1|545254_545632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010619424.1|545763_546852_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	41.6	1.5e-36
WP_010619423.1|546862_547681_+	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	25.7	2.2e-11
WP_010619422.1|547677_548496_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_147656747.1|548492_549566_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010619420.1|549613_549949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147656749.1|550020_551775_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.1	2.3e-98
WP_010619418.1|551766_552600_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010619417.1|552757_553027_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147656751.1|553154_555530_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
WP_010619415.1|555560_556595_-	lactonase family protein	NA	NA	NA	NA	NA
WP_010619414.1|556683_557181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147656753.1|557274_557727_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_010619412.1|557985_559212_+	N-acetylmuramoyl-L-alanine amidase	NA	J3RJW9	Listeria_phage	31.6	4.1e-14
WP_010619411.1|559247_560033_-	YibE/F family protein	NA	NA	NA	NA	NA
WP_147656755.1|560029_561145_-	YibE/F family protein	NA	NA	NA	NA	NA
WP_010619408.1|561488_561923_-	universal stress protein	NA	NA	NA	NA	NA
WP_147656757.1|561994_563590_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_147656759.1|563613_564204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010619405.1|564406_564655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147656761.1|564810_566007_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	32.8	2.3e-25
>prophage 3
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	806074	813485	2026419	transposase	Bacillus_phage(33.33%)	9	NA	NA
WP_147656976.1|806074_807001_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.7	1.6e-42
WP_033445309.1|806943_807432_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_147656978.1|807793_808534_+	glucose 1-dehydrogenase	NA	A0A2P0VP75	Tetraselmis_virus	24.4	6.2e-05
WP_010619155.1|808726_809287_+	DUF1097 domain-containing protein	NA	NA	NA	NA	NA
WP_010619154.1|809368_809794_-	N-acetyltransferase	NA	A0A1X9I6I8	Streptococcus_phage	42.8	9.9e-32
WP_147656979.1|809954_810356_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A090DBV2	Clostridium_phage	31.8	1.8e-06
WP_029327485.1|810432_810918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010619151.1|811101_811797_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.9	3.0e-30
WP_147656981.1|812363_813485_-	zinc-binding dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	27.8	9.3e-13
>prophage 4
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	1387112	1442933	2026419	transposase,protease,tRNA	Lactobacillus_phage(18.75%)	50	NA	NA
WP_002816285.1|1387112_1387364_+|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	96.4	9.2e-38
WP_029327644.1|1387414_1388257_+|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	99.6	1.0e-157
WP_147657454.1|1388489_1389245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657455.1|1389335_1389884_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_147657457.1|1389965_1390628_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_147657459.1|1390909_1392166_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.9	6.0e-85
WP_147657461.1|1397696_1399037_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_147657905.1|1399474_1400863_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_147657463.1|1400880_1402083_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_147657464.1|1402116_1404420_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_029327638.1|1404759_1405779_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_147657466.1|1405799_1406726_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_125547835.1|1406968_1408252_+|transposase	ISL3 family transposase	transposase	A0A2R2ZGN7	Clostridioides_phage	21.8	5.9e-11
WP_010620797.1|1408303_1408771_-	DNA starvation/stationary phase protection protein	NA	A0A291I9P0	Lactobacillus_phage	28.4	1.0e-13
WP_147657468.1|1408921_1410190_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
WP_147657470.1|1410202_1411162_+	IpaB/EvcA family protein	NA	NA	NA	NA	NA
WP_147657472.1|1411183_1411882_+	NAD-dependent protein deacylase	NA	S5M4R0	Bacillus_phage	30.9	6.8e-22
WP_147657474.1|1411901_1412231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657476.1|1412256_1413102_+	DUF72 domain-containing protein	NA	A0A2R3ZR64	Marseillevirus	26.7	5.4e-13
WP_147657478.1|1413204_1415259_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	35.9	7.3e-88
WP_147657480.1|1415313_1416093_+	YchF/TatD family DNA exonuclease	NA	NA	NA	NA	NA
WP_010620789.1|1416089_1416668_+	ribonuclease M5	NA	NA	NA	NA	NA
WP_010620788.1|1416657_1417548_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010620787.1|1417639_1417879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657482.1|1417972_1418827_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_147657484.1|1418948_1419863_+	zinc ABC transporter solute-binding protein	NA	NA	NA	NA	NA
WP_147657486.1|1419855_1420563_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.5	3.3e-16
WP_010620783.1|1420555_1421353_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_147657488.1|1421523_1422345_+	pur operon repressor	NA	NA	NA	NA	NA
WP_147657490.1|1422377_1423757_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	35.4	8.2e-27
WP_010620780.1|1423829_1424810_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.9	9.2e-41
WP_010620779.1|1424868_1425222_+	DUF3899 domain-containing protein	NA	NA	NA	NA	NA
WP_010620778.1|1425515_1426916_+	amino acid permease	NA	NA	NA	NA	NA
WP_147657492.1|1426969_1427779_-	sugar-phosphatase	NA	NA	NA	NA	NA
WP_147657494.1|1427785_1429150_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	31.8	1.2e-27
WP_147657496.1|1429164_1429989_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_147657498.1|1430137_1430518_+	VOC family protein	NA	NA	NA	NA	NA
WP_010620773.1|1430591_1431032_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_010620772.1|1431077_1431698_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_010620771.1|1431899_1433507_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.6	2.1e-138
WP_010620770.1|1433736_1435014_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010620769.1|1435125_1435377_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_147657500.1|1435345_1437205_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.3	3.7e-99
WP_076621487.1|1437219_1438146_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.7	1.0e-41
WP_010620867.1|1438091_1438616_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_133278297.1|1438739_1439990_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_147657502.1|1440087_1440789_+	sortase	NA	NA	NA	NA	NA
WP_010620766.1|1440845_1441310_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_133278298.1|1441454_1442036_+	LemA family protein	NA	A0A1X9IGG1	Lactococcus_phage	34.5	1.5e-14
WP_010620764.1|1442045_1442933_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
>prophage 5
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	1535777	1600014	2026419	transposase,holin,tRNA	Streptococcus_phage(26.09%)	60	NA	NA
WP_010620546.1|1535777_1536815_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	NA	NA	NA	NA
WP_147657568.1|1536889_1538267_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	40.8	7.1e-47
WP_147657570.1|1538309_1540268_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.4	3.1e-56
WP_010620548.1|1540471_1541104_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_010620549.1|1541265_1541550_+	co-chaperone GroES	NA	A0A221S331	uncultured_virus	32.2	1.6e-06
WP_010620550.1|1541578_1543204_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	53.0	3.8e-156
WP_010620551.1|1543434_1545270_+	APC family permease	NA	NA	NA	NA	NA
WP_147657572.1|1545407_1546943_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_147657909.1|1547001_1547724_-|holin	antiholin LrgB	holin	NA	NA	NA	NA
WP_010620554.1|1547831_1548269_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010620555.1|1548596_1549703_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_029327620.1|1549728_1550373_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	43.3	3.8e-43
WP_010620557.1|1550432_1551785_+	DEAD/DEAH box helicase family protein	NA	A0A1X9I5S6	Streptococcus_phage	40.9	6.9e-71
WP_010620558.1|1551777_1552467_+	ComF family protein	NA	NA	NA	NA	NA
WP_010620559.1|1552604_1553162_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_147656485.1|1553243_1553732_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_133278299.1|1553674_1554601_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.7	1.6e-42
WP_010620560.1|1554755_1557119_+	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_029327622.1|1557226_1558291_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010620562.1|1558378_1559533_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_010620563.1|1559710_1560016_+	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_010620564.1|1560012_1560366_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010620565.1|1560448_1561387_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010620566.1|1561406_1562267_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_010620567.1|1562268_1563294_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010620568.1|1563310_1564204_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	47.3	1.8e-67
WP_010620569.1|1564294_1565236_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	50.8	8.2e-87
WP_010620570.1|1565388_1567389_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_147657574.1|1567421_1570271_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	53.9	3.7e-300
WP_010620572.1|1570412_1570952_+	membrane protein	NA	NA	NA	NA	NA
WP_010620573.1|1571091_1571967_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	27.7	5.0e-06
WP_010620574.1|1571966_1572983_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	54.1	3.4e-94
WP_010620575.1|1572987_1573929_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	37.1	2.0e-48
WP_010620576.1|1573969_1574482_-	thioredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010620577.1|1574532_1575126_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.3	8.9e-55
WP_010620578.1|1575703_1576732_+	SorC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010620579.1|1576798_1577809_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010620580.1|1577907_1579110_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010620581.1|1579226_1579982_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_010620582.1|1580074_1581394_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	69.4	2.3e-172
WP_147657576.1|1581466_1582744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010620584.1|1582841_1583078_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_147657577.1|1583146_1583902_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010620586.1|1583905_1586251_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.4e-89
WP_010620587.1|1586284_1586758_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	60.0	2.3e-45
WP_147657579.1|1586917_1588366_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010620589.1|1588362_1589106_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.4	2.7e-32
WP_010620590.1|1589135_1589711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010620591.1|1589831_1590533_+	uracil-DNA glycosylase	NA	V5NWU7	Chelonid_alphaherpesvirus	44.1	9.8e-45
WP_010620592.1|1590590_1591562_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_033445284.1|1591628_1592105_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_147657581.1|1592097_1592328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657583.1|1592406_1592613_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_147657585.1|1592656_1593583_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.7	7.1e-43
WP_147657911.1|1593525_1594017_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010620596.1|1594083_1594617_-	exonuclease	NA	M1PFD8	Streptococcus_phage	38.5	6.6e-25
WP_010620597.1|1594644_1595409_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	49.6	5.7e-62
WP_147657588.1|1595555_1596458_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_147657589.1|1596481_1598581_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_147657317.1|1598635_1600014_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	41.2	1.9e-47
>prophage 6
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	1607131	1667762	2026419	transposase,integrase	Streptococcus_phage(15.0%)	59	1607870:1607929	1665967:1667730
WP_010620866.1|1607131_1607830_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	44.8	1.1e-35
WP_147657591.1|1607844_1609644_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.3	3.6e-99
1607870:1607929	attL	AATTCGAATTTGAATTCCTGGTTCTTTCATTTTATGTAGGCACGGTGTGCCCAAATCTGT	NA	NA	NA	NA
WP_010620606.1|1609714_1610425_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_147657593.1|1610569_1611955_+	muramidase	NA	A0A249Y0X5	Enterococcus_phage	35.1	6.8e-13
WP_010620608.1|1612180_1612903_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	NA	Q332B8	Clostridium_botulinum_C_phage	35.7	6.9e-09
WP_010620609.1|1613016_1614102_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_033445290.1|1614396_1614705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010620611.1|1615137_1615953_-	LicD family protein	NA	A0A1V0SD50	Indivirus	48.1	1.9e-07
WP_010620612.1|1616067_1616505_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010620613.1|1616702_1617119_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010620614.1|1617795_1618296_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_147657595.1|1618308_1619151_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010620616.1|1619150_1619618_+	pyridoxamine 5'-phosphate oxidase-related fmn-binding protein	NA	NA	NA	NA	NA
WP_010620617.1|1619614_1619974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147657597.1|1620434_1621628_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_147657599.1|1621660_1622848_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_147657601.1|1623173_1625297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657603.1|1625645_1626926_+	thiolase family protein	NA	NA	NA	NA	NA
WP_147657605.1|1626941_1627376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657607.1|1627456_1628371_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_147657609.1|1628490_1629237_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.9	1.2e-16
WP_147657611.1|1631330_1632269_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_147657317.1|1632409_1633788_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	41.2	1.9e-47
WP_147657613.1|1634108_1635272_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5S7K9	Streptococcus_phage	36.7	2.1e-63
WP_147657615.1|1635325_1635970_-	helix-turn-helix domain-containing protein	NA	A0A0P0IV68	Lactobacillus_phage	50.8	8.0e-09
WP_147657617.1|1636119_1636332_+	helix-turn-helix domain-containing protein	NA	D7RWM4	Brochothrix_phage	56.9	5.6e-12
WP_147657619.1|1636378_1636666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657621.1|1636830_1637706_+	DnaD domain protein	NA	C8CGZ1	Staphylococcus_phage	38.6	3.8e-38
WP_147657623.1|1637718_1638780_+	ATP-binding protein	NA	A0A1P8BKV8	Lactococcus_phage	28.0	2.9e-16
WP_147657625.1|1638772_1639219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657627.1|1639215_1639512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657629.1|1639681_1640008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657631.1|1640192_1640531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657632.1|1640503_1640857_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_147657634.1|1640861_1641347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657636.1|1641343_1641712_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657638.1|1641756_1642314_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	31.5	3.2e-06
WP_147657640.1|1643357_1644128_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_147657642.1|1644260_1644935_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010620624.1|1644966_1645716_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.8	8.1e-37
WP_147657644.1|1645712_1647179_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010620626.1|1647206_1648379_+	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA	NA
WP_010620627.1|1648519_1649377_+	glucose transporter GlcU	NA	NA	NA	NA	NA
WP_010620628.1|1649472_1650819_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010620629.1|1650847_1651270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657646.1|1651330_1652362_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
WP_010620631.1|1652534_1652864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010620861.1|1654950_1656189_-|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	48.2	4.0e-81
WP_056973818.1|1656543_1656912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010620634.1|1657004_1658015_+	serine hydrolase	NA	A0A1V0SLG8	Klosneuvirus	30.8	7.6e-06
WP_010620635.1|1658051_1658756_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_010620636.1|1658752_1660102_-	Mur ligase family protein	NA	NA	NA	NA	NA
WP_010620637.1|1660307_1660892_+	thymidine kinase	NA	E0YIP8	Lactococcus_phage	52.6	3.0e-47
WP_029327625.1|1660906_1661989_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_010620639.1|1661981_1662857_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010620640.1|1662837_1663866_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	38.6	3.9e-50
WP_010620641.1|1663934_1665197_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	52.8	2.6e-96
WP_147657648.1|1665287_1665917_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_147657650.1|1665983_1667762_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.3	3.6e-99
1665967:1667730	attR	AATTCGAATTTGAATTCCTGGTTCTTTCATTTTATGTAGGCACGGTGTGCCCAAATCTGTTAATCTTAAATCACCACAAAATAAGAAAGTTGGTGCCCACCGTGTATAAACATTATAACAATAACCAAACCATATTAACATTTCCAATTGAATTTAAAATTAATCCCAATCATATTGTCGTTTCAATTAGTGATTTTGTAGATAGTATTCCCACTGAAATTCTGTATCCGGATGCTGACAAGTTTGGGCGACCAAAATATTCGCCAGCGATGATGATGAAACTCCTATTATTTGCTTATATGCGTCATACGTTTTCTGGCCGTGCTATCCAAGAAATGGCAGAGGAAAACCTACCAATGAAGTGGTTAATTGGTAATCCGGACGAAGTCCCAAGTTATCGGAGCATTAATCGCTTTCGAATTTCACAAGTAGCAAAAGGGATTATCAAAAAAATGTTTCTTCAATTTCATGAACAATTAAGTGCATATGGTTTAGTAGATGACGAATCGTTATTTATTGATGGCACAAAGATTGTCGCAGATGCCAATAAATACTCCTTTGTTTGGCGAAAAAGCGTCGAACGAAATGATGCCAAGTTAGAGGAAAAAGCTAGCGCCTTATTTGATGACATGATTCAAGAAAAGGTTAATCTAGCAACTGATGCCGAAGGCACTTTGGCGAAGTTAGATCATGCAGAACGTGAATTAGAACATGATATTGATGACCTCGATCAGAAAATTAGTGCAGAAAAAGTCATTAAAGGTGGCTCGCCATCAAAGCAACGACGAAGAAAACTAAAACATTTTAAGCATATTATTACTTCGGATTTAAAGCCTCGGAAGCAAAAATATGAAGATTATCTTGAAATTCTGGGAAACCGAAACAGTTTTTCTAAGACTGATCATGATGCAACCTTTATGCGAATGAAGGAAGATCCAATGCAAAATGGTCAATTAAAACCAGGATATAACTTACAGATTGGTACTCAAAATCAATTTGTCCTATTTTATGATTTGAATCAACGGCCAGCTGACCAAAGAACGCTAGTCCCATTTTTGAATCAAGTCCAACAAAGAAAGGCCACGTTCCGTTACGTAGTAGCGGATGCAGGTTATGGTAGTGAACCAAATTATGACTTTGTTTTAAAGGATTTTAAAGCGACGCCACTTATTCCCTATACAATGTATTTAAAAGAACAATCCAAGAAGTATAAAAATGATGCCAATAAGGTTATGAATTGGACCTATGATAACGCAACTGACAGTTTCACTGATCAGCATCATATTCAATTCTCCTTTAAACAAGTCTATAACAGGACTGATAAGTATGGGTTTCAGCGGACCATTCGAAAATATGAAGCCAATCAATACGAGGATCCCGAAGGTTATCACTATTCGATTACGGAAAGGGGTAACCAACGGTCAATCCAAATAAATCCGCATTGGGAAATGGAAAAAAGATTAATTAGAGTTAAGCTTTCAAGTAAGACAGGTGCTTCAATTTACGCAAAGCGTAAAATTGAAGTTGAGCCAGTTTTTGGTAACTTGAAGGCTAATTTGGCGTTCAAACGCTTATCAGTCAGAGGGTTAGAAAAAGCCAAAAATGAATTGGGGATCATTTTAATGGCCGGAAACTTAAAGAAGATGATGAAAATCATCCTTTCAAGTCGTCAGCAGAGTCAAAAAAGTAGTTGGAAAAACTTAGTGAATAAGTTTTTCCAACTACTTTTTTATTCAGAGGTCAGTTTTGTCCCAGCCACTTTTT	NA	NA	NA	NA
>prophage 7
NZ_CP042371	Lactobacillus malefermentans strain CBA3618 chromosome, complete genome	2026419	1844903	1902810	2026419	transposase,protease,tRNA	Staphylococcus_phage(13.04%)	52	NA	NA
WP_010619754.1|1844903_1845827_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010619755.1|1845826_1847893_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_147657771.1|1848037_1849885_+	DNA primase	NA	A0A1S5RH72	Helicobacter_phage	31.7	1.2e-44
WP_147657773.1|1849899_1851132_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	37.6	2.0e-37
WP_010619758.1|1851340_1852036_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_147657775.1|1852032_1853142_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010619760.1|1853159_1854395_+	peptidase T	NA	NA	NA	NA	NA
WP_147657777.1|1854531_1857120_+	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	37.2	8.5e-126
WP_010619762.1|1857187_1857376_-	DUF2929 family protein	NA	NA	NA	NA	NA
WP_147657779.1|1857501_1860855_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	32.5	6.2e-153
WP_010619764.1|1861064_1862822_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010619765.1|1862959_1863838_+	S1 RNA-binding protein	NA	NA	NA	NA	NA
WP_147657781.1|1863859_1864756_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	35.0	2.8e-44
WP_147657783.1|1864829_1865189_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_147657785.1|1865178_1865937_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.3	1.4e-07
WP_010619769.1|1865933_1866518_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	41.0	3.1e-12
WP_010619770.1|1866518_1867241_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_147657917.1|1867578_1868127_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_147657787.1|1868222_1869266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147657789.1|1869255_1870704_+	RecQ family ATP-dependent DNA helicase	NA	A0A1V0SGM9	Hokovirus	38.3	7.7e-52
WP_010619775.1|1870762_1871371_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010619776.1|1871394_1872072_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_147657791.1|1872158_1873424_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010619778.1|1873522_1874833_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010619779.1|1875084_1875360_+	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	67.4	1.2e-25
WP_147657793.1|1875492_1876761_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010620867.1|1876877_1877402_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_076621487.1|1877347_1878274_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	37.7	1.0e-41
WP_147657794.1|1878288_1880085_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.3	3.6e-99
WP_029327537.1|1880072_1880957_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	37.7	8.0e-52
WP_010619782.1|1881095_1882295_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	53.7	2.1e-47
WP_010619783.1|1882314_1884201_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	1.7e-51
WP_010619784.1|1884217_1885168_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	63.4	1.1e-118
WP_010619785.1|1885185_1885674_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	42.8	6.2e-30
WP_147657796.1|1885724_1886492_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_010619787.1|1886537_1887383_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.2	3.0e-16
WP_010619788.1|1887439_1888348_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_010619789.1|1888361_1888985_+	YpmS family protein	NA	NA	NA	NA	NA
WP_010619790.1|1888986_1889208_+	YozE family protein	NA	NA	NA	NA	NA
WP_010619791.1|1889351_1889708_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_010619792.1|1889697_1889964_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010619793.1|1890223_1891087_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_010619794.1|1891079_1891868_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	38.0	5.3e-23
WP_010619795.1|1891895_1892768_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_010619796.1|1892878_1894978_+	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	36.8	1.1e-102
WP_002816285.1|1895407_1895659_+|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	96.4	9.2e-38
WP_029327644.1|1895712_1896555_+|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	99.6	1.0e-157
WP_147657798.1|1896958_1898008_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010619799.1|1898213_1899755_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_010619800.1|1899910_1900819_+	tyrosine recombinase XerC	NA	A0A1I9SC88	Mycobacterium_phage	28.6	2.0e-13
WP_010619801.1|1900837_1901398_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_010619802.1|1901397_1902810_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IEP8	Erwinia_phage	25.9	1.5e-28
