assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	1	1546851-1547000	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	54	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA|28aa|down_7|NZ_CP042645.1_1565890_1565974_+	NA|129aa|up_9|NZ_CP042645.1_1532463_1532850_-	PRK11401, PRK11401, enamine/imine deaminase	NA|154aa|up_8|NZ_CP042645.1_1532922_1533384_-	TIGR00240, Aspartate_carbamoyltransferase_regulatory_chain, aspartate carbamoyltransferase, regulatory subunit	NA|45aa|up_7|NZ_CP042645.1_1534335_1534470_-	pfam08052, PyrBI_leader, PyrBI operon leader peptide	NA|132aa|up_6|NZ_CP042645.1_1534751_1535147_-	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|238aa|up_5|NZ_CP042645.1_1535277_1535991_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|151aa|up_4|NZ_CP042645.1_1536798_1537251_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|335aa|up_3|NZ_CP042645.1_1539810_1540815_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_2|NZ_CP042645.1_1540976_1541393_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_1|NZ_CP042645.1_1541438_1541942_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|362aa|up_0|NZ_CP042645.1_1545155_1546241_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|504aa|down_0|NZ_CP042645.1_1547036_1548548_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|497aa|down_1|NZ_CP042645.1_1551154_1552645_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|340aa|down_2|NZ_CP042645.1_1552785_1553805_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|127aa|down_3|NZ_CP042645.1_1555501_1555882_+	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|339aa|down_4|NZ_CP042645.1_1556774_1557791_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|301aa|down_5|NZ_CP042645.1_1557858_1558761_+	pfam09160, FimH_man-bind, FimH, mannose binding	NA|277aa|down_6|NZ_CP042645.1_1564468_1565299_-	pfam10887, DUF2686, Protein of unknown function (DUF2686)	NA|28aa|down_7|NZ_CP042645.1_1565890_1565974_+	NA	NA|131aa|down_8|NZ_CP042645.1_1565970_1566363_+	PRK14128, iraD, anti-adapter protein IraD	NA|154aa|down_9|NZ_CP042645.1_1568514_1568976_-	PRK10519, PRK10519, hypothetical protein; Provisional
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	2	1697336-1697466	1	PILER-CR	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	TTTTCAATATTGGTGAT	17	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA	NA|88aa|up_9|NZ_CP042645.1_1675844_1676108_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|73aa|up_8|NZ_CP042645.1_1676210_1676429_+	pfam10837, DUF2575, Protein of unknown function (DUF2575)	NA|374aa|up_7|NZ_CP042645.1_1677421_1678543_+	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|165aa|up_6|NZ_CP042645.1_1680238_1680733_+	PRK00376, lspA, lipoprotein signal peptidase	NA|305aa|up_5|NZ_CP042645.1_1682324_1683239_+	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|1074aa|up_4|NZ_CP042645.1_1685847_1689069_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|132aa|up_3|NZ_CP042645.1_1689330_1689726_+	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|262aa|up_2|NZ_CP042645.1_1690531_1691317_-	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|518aa|up_1|NZ_CP042645.1_1691425_1692979_-	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|381aa|up_0|NZ_CP042645.1_1694397_1695540_-	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|257aa|down_0|NZ_CP042645.1_1697556_1698327_+	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|314aa|down_1|NZ_CP042645.1_1698341_1699283_+	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|429aa|down_2|NZ_CP042645.1_1699333_1700620_+	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|96aa|down_3|NZ_CP042645.1_1700616_1700904_+	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|177aa|down_4|NZ_CP042645.1_1702400_1702931_+	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|621aa|down_5|NZ_CP042645.1_1702923_1704786_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|160aa|down_6|NZ_CP042645.1_1706522_1707002_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|126aa|down_7|NZ_CP042645.1_1707926_1708304_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|330aa|down_8|NZ_CP042645.1_1709123_1710113_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|272aa|down_9|NZ_CP042645.1_1714057_1714873_+	PRK09430, djlA, co-chaperone DjlA
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	3	2213408-2213504	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA	NA|293aa|up_9|NZ_CP042645.1_2198633_2199512_+	PRK15059, PRK15059, 2-hydroxy-3-oxopropionate reductase	NA|485aa|up_8|NZ_CP042645.1_2199679_2201134_+	PRK11375, PRK11375, putative allantoin permease	NA|454aa|up_7|NZ_CP042645.1_2201193_2202555_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_6|NZ_CP042645.1_2202611_2203913_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_5|NZ_CP042645.1_2203933_2205079_+	PRK09932, PRK09932, glycerate 3-kinase	NA|366aa|up_4|NZ_CP042645.1_2206100_2207198_-	TIGR03176, AllC, allantoate amidohydrolase	NA|66aa|up_3|NZ_CP042645.1_2207137_2207335_-	TIGR03176, AllC, allantoate amidohydrolase	NA|556aa|up_2|NZ_CP042645.1_2208722_2210390_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_1|NZ_CP042645.1_2210399_2211659_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_0|NZ_CP042645.1_2211669_2212485_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|356aa|down_0|NZ_CP042645.1_2213568_2214636_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|462aa|down_1|NZ_CP042645.1_2216649_2218035_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|181aa|down_2|NZ_CP042645.1_2220250_2220793_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|105aa|down_3|NZ_CP042645.1_2224032_2224347_+	PRK15198, PRK15198, outer membrane usher protein FimD	NA|211aa|down_4|NZ_CP042645.1_2225896_2226529_-	PRK09935, PRK09935, fimbriae biosynthesis transcriptional regulator FimZ	NA|190aa|down_5|NZ_CP042645.1_2229819_2230389_-	PRK09782, PRK09782, bacteriophage N4 receptor, outer membrane subunit; Provisional	NA|483aa|down_6|NZ_CP042645.1_2232470_2233919_-	PRK09835, PRK09835, Cu(+)/Ag(+) sensor histidine kinase	NA|228aa|down_7|NZ_CP042645.1_2233908_2234592_-	PRK09836, PRK09836, DNA-binding transcriptional activator CusR; Provisional	NA|403aa|down_8|NZ_CP042645.1_2235652_2236861_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|459aa|down_9|NZ_CP042645.1_2242448_2243825_+	PRK10249, PRK10249, phenylalanine transporter; Provisional
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	4	2459904-2459992	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	GGTTGTCCAACGGTTGTCCAACG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA|103aa|up_9|NZ_CP042645.1_2454543_2454852_-,NA|150aa|up_5|NZ_CP042645.1_2456271_2456721_-,NA|135aa|up_3|NZ_CP042645.1_2457585_2457990_-,NA|63aa|down_1|NZ_CP042645.1_2461923_2462112_+,NA|67aa|down_2|NZ_CP042645.1_2462137_2462338_+,NA|107aa|down_3|NZ_CP042645.1_2462349_2462670_+	NA|103aa|up_9|NZ_CP042645.1_2454543_2454852_-	NA	NA|51aa|up_8|NZ_CP042645.1_2454936_2455089_-	pfam06301, Lambda_Kil, Bacteriophage lambda Kil protein	NA|45aa|up_7|NZ_CP042645.1_2455073_2455208_-	pfam08134, cIII, cIII protein family	NA|123aa|up_6|NZ_CP042645.1_2455283_2455652_-	pfam10800, DUF2528, Protein of unknown function (DUF2528)	NA|150aa|up_5|NZ_CP042645.1_2456271_2456721_-	NA	NA|127aa|up_4|NZ_CP042645.1_2456955_2457336_-	pfam11438, N36, 36-mer N-terminal peptide of the N protein (N36)	NA|135aa|up_3|NZ_CP042645.1_2457585_2457990_-	NA	NA|211aa|up_2|NZ_CP042645.1_2457986_2458619_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|72aa|up_1|NZ_CP042645.1_2458722_2458938_+	pfam01381, HTH_3, Helix-turn-helix	NA|94aa|up_0|NZ_CP042645.1_2459054_2459336_+	pfam05269, Phage_CII, Bacteriophage CII protein	NA|479aa|down_0|NZ_CP042645.1_2460399_2461836_+	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|63aa|down_1|NZ_CP042645.1_2461923_2462112_+	NA	NA|67aa|down_2|NZ_CP042645.1_2462137_2462338_+	NA	NA|107aa|down_3|NZ_CP042645.1_2462349_2462670_+	NA	NA|137aa|down_4|NZ_CP042645.1_2462672_2463083_+	pfam05772, NinB, NinB protein	NA|59aa|down_5|NZ_CP042645.1_2463079_2463256_+	pfam05322, NinE, NINE Protein	NA|59aa|down_6|NZ_CP042645.1_2463604_2463781_+	pfam05810, NinF, NinF protein	NA|242aa|down_7|NZ_CP042645.1_2463773_2464499_+	COG3645, COG3645, Uncharacterized phage-encoded protein [Function unknown]	NA|121aa|down_8|NZ_CP042645.1_2464783_2465146_+	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|63aa|down_9|NZ_CP042645.1_2465142_2465331_+	pfam06322, Phage_NinH, Phage NinH protein
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	5	2642086-2642290	2,4,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	2,3,3	3	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA	NA|172aa|up_9|NZ_CP042645.1_2620292_2620808_-	PRK10533, PRK10533, putative lipoprotein; Provisional	NA|108aa|up_8|NZ_CP042645.1_2620933_2621257_+	PRK02877, PRK02877, hypothetical protein; Provisional	NA|334aa|up_7|NZ_CP042645.1_2624631_2625633_-	PRK10534, PRK10534, L-threonine aldolase; Provisional	NA|573aa|up_6|NZ_CP042645.1_2625669_2627388_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|323aa|up_5|NZ_CP042645.1_2627520_2628489_-	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional	NA|232aa|up_4|NZ_CP042645.1_2631689_2632385_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|319aa|up_3|NZ_CP042645.1_2634466_2635423_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_2|NZ_CP042645.1_2635573_2636689_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|69aa|up_1|NZ_CP042645.1_2638720_2638927_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_0|NZ_CP042645.1_2639249_2639570_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|73aa|down_0|NZ_CP042645.1_2642673_2642892_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP042645.1_2643176_2643881_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|322aa|down_2|NZ_CP042645.1_2647533_2648499_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|204aa|down_3|NZ_CP042645.1_2653818_2654430_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|206aa|down_4|NZ_CP042645.1_2659858_2660476_+	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|209aa|down_5|NZ_CP042645.1_2661373_2662000_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|383aa|down_6|NZ_CP042645.1_2662313_2663462_+	PRK03633, PRK03633, putative MFS family transporter protein; Provisional	NA|587aa|down_7|NZ_CP042645.1_2671310_2673071_-	TIGR03549, TIGR03549, YcaO domain protein	NA|231aa|down_8|NZ_CP042645.1_2673200_2673893_+	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|363aa|down_9|NZ_CP042645.1_2674091_2675180_+	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	6	3855163-3855303	5	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	TGCCTGATGCGACGCTAACGCGTCTTATCAGACCTACAAGATCC	44	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA	NA|136aa|up_9|NZ_CP042645.1_3834806_3835214_-	TIGR04366, hypothetical_protein, cupin fold metalloprotein, WbuC family	NA|301aa|up_8|NZ_CP042645.1_3838649_3839552_-	TIGR04130, L-fucosamine_synthetase, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase	NA|45aa|up_7|NZ_CP042645.1_3839548_3839683_-	TIGR04130, L-fucosamine_synthetase, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase	NA|368aa|up_6|NZ_CP042645.1_3839691_3840795_-	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|99aa|up_5|NZ_CP042645.1_3841071_3841368_-	PRK09677, PRK09677, putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional	NA|322aa|up_4|NZ_CP042645.1_3844063_3845029_-	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|181aa|up_3|NZ_CP042645.1_3846294_3846837_-	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|293aa|up_2|NZ_CP042645.1_3846839_3847718_-	PRK15480, PRK15480, glucose-1-phosphate thymidylyltransferase RfbA; Provisional	NA|300aa|up_1|NZ_CP042645.1_3847775_3848675_-	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional	NA|465aa|up_0|NZ_CP042645.1_3851201_3852596_-	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional	NA|465aa|down_0|NZ_CP042645.1_3856858_3858253_-	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional	NA|457aa|down_1|NZ_CP042645.1_3858389_3859760_-	PRK15414, PRK15414, phosphomannomutase	NA|479aa|down_2|NZ_CP042645.1_3859952_3861389_-	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional	NA|160aa|down_3|NZ_CP042645.1_3862612_3863092_-	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|322aa|down_4|NZ_CP042645.1_3863094_3864060_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|406aa|down_5|NZ_CP042645.1_3866531_3867749_-	TIGR04010, WcaD, putative colanic acid polymerase WcaD	NA|406aa|down_6|NZ_CP042645.1_3867723_3868941_-	TIGR04015, WcaC, colanic acid biosynthesis glycosyl transferase WcaC	NA|163aa|down_7|NZ_CP042645.1_3868937_3869426_-	PRK10191, PRK10191, putative acyl transferase; Provisional	NA|721aa|down_8|NZ_CP042645.1_3870358_3872521_-	PRK11519, PRK11519, tyrosine-protein kinase Wzc	NA|148aa|down_9|NZ_CP042645.1_3872523_3872967_-	PRK10126, PRK10126, low molecular weight protein-tyrosine-phosphatase Wzb
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	7	4085975-4086101	6	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	39	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA	NA|163aa|up_9|NZ_CP042645.1_4042548_4043037_+	COG4574, Eco, Serine protease inhibitor ecotin [General function prediction only]	NA|549aa|up_8|NZ_CP042645.1_4043866_4045513_-	PRK05257, PRK05257, malate:quinone oxidoreductase; Validated	NA|548aa|up_7|NZ_CP042645.1_4045730_4047374_-	PRK10522, PRK10522, multidrug transporter membrane component/ATP-binding component; Provisional	NA|217aa|up_6|NZ_CP042645.1_4054962_4055613_+	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional	NA|462aa|up_5|NZ_CP042645.1_4060651_4062037_+	PRK11361, PRK11361, acetoacetate metabolism transcriptional regulator AtoC	NA|221aa|up_4|NZ_CP042645.1_4062232_4062895_+	PRK09920, PRK09920, acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Provisional	NA|252aa|up_3|NZ_CP042645.1_4066150_4066906_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_2|NZ_CP042645.1_4075570_4078198_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_1|NZ_CP042645.1_4078344_4079067_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|51aa|up_0|NZ_CP042645.1_4083639_4083792_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP042645.1_4086157_4087288_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP042645.1_4087287_4087542_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP042645.1_4087595_4088246_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|420aa|down_3|NZ_CP042645.1_4093040_4094300_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_4|NZ_CP042645.1_4094296_4095487_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|300aa|down_5|NZ_CP042645.1_4095679_4096579_+	PRK09956, PRK09956, ISNCY family transposase	NA|62aa|down_6|NZ_CP042645.1_4096591_4096777_+	PRK09956, PRK09956, ISNCY family transposase	NA|261aa|down_7|NZ_CP042645.1_4100205_4100988_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|181aa|down_8|NZ_CP042645.1_4102511_4103054_-	pfam07437, YfaZ, YfaZ precursor	NA|142aa|down_9|NZ_CP042645.1_4103333_4103759_+	PRK15472, PRK15472, nucleoside triphosphatase NudI; Provisional
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	8	4575113-4575446	3,7,2	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA|60aa|up_8|NZ_CP042645.1_4554252_4554432_-,NA	NA|118aa|up_9|NZ_CP042645.1_4553867_4554221_-	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter	NA|60aa|up_8|NZ_CP042645.1_4554252_4554432_-	NA	NA|219aa|up_7|NZ_CP042645.1_4557172_4557829_+	PRK09968, PRK09968, protein-serine/threonine phosphatase	NA|303aa|up_6|NZ_CP042645.1_4558843_4559752_+	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|421aa|up_5|NZ_CP042645.1_4559748_4561011_+	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown]	NA|259aa|up_4|NZ_CP042645.1_4561649_4562426_+	PRK09989, PRK09989, HPr family phosphocarrier protein	NA|254aa|up_3|NZ_CP042645.1_4566927_4567689_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|104aa|up_2|NZ_CP042645.1_4569921_4570233_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|202aa|up_1|NZ_CP042645.1_4570798_4571404_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|346aa|up_0|NZ_CP042645.1_4573992_4575030_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|51aa|down_0|NZ_CP042645.1_4576827_4576980_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_1|NZ_CP042645.1_4577244_4577979_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_2|NZ_CP042645.1_4578052_4579765_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|424aa|down_3|NZ_CP042645.1_4582320_4583592_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|down_4|NZ_CP042645.1_4583582_4583843_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|down_5|NZ_CP042645.1_4583859_4584435_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|260aa|down_6|NZ_CP042645.1_4585438_4586218_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|262aa|down_7|NZ_CP042645.1_4589146_4589932_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|493aa|down_8|NZ_CP042645.1_4591552_4593031_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|339aa|down_9|NZ_CP042645.1_4593778_4594795_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	9	4594868-4595262	8,4,3	CRISPRCasFinder,PILER-CR,CRT	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC	29,28,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA|47aa|down_0|NZ_CP042645.1_4596411_4596552_+	NA|51aa|up_9|NZ_CP042645.1_4576827_4576980_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|up_8|NZ_CP042645.1_4577244_4577979_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_7|NZ_CP042645.1_4578052_4579765_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|424aa|up_6|NZ_CP042645.1_4582320_4583592_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_5|NZ_CP042645.1_4583582_4583843_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_4|NZ_CP042645.1_4583859_4584435_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|260aa|up_3|NZ_CP042645.1_4585438_4586218_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|262aa|up_2|NZ_CP042645.1_4589146_4589932_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|493aa|up_1|NZ_CP042645.1_4591552_4593031_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|339aa|up_0|NZ_CP042645.1_4593778_4594795_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|47aa|down_0|NZ_CP042645.1_4596411_4596552_+	NA	NA|112aa|down_1|NZ_CP042645.1_4602386_4602722_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_2|NZ_CP042645.1_4602721_4602970_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|434aa|down_3|NZ_CP042645.1_4605329_4606631_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|447aa|down_4|NZ_CP042645.1_4609675_4611016_-	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|447aa|down_5|NZ_CP042645.1_4611036_4612377_-	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|150aa|down_6|NZ_CP042645.1_4614164_4614614_-	PRK08105, PRK08105, flavodoxin; Provisional	NA|110aa|down_7|NZ_CP042645.1_4615412_4615742_-	COG3098, COG3098, Uncharacterized protein conserved in bacteria [Function unknown]	NA|283aa|down_8|NZ_CP042645.1_4616977_4617826_+	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional	NA|455aa|down_9|NZ_CP042645.1_4617937_4619302_+	pfam11892, DUF3412, Domain of unknown function (DUF3412)
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	10	4969214-4969361	9	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	CACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATC	46	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA|129aa|down_0|NZ_CP042645.1_4974476_4974863_+,NA|64aa|down_1|NZ_CP042645.1_4974871_4975063_+,NA|475aa|down_4|NZ_CP042645.1_4978077_4979502_+,NA|181aa|down_8|NZ_CP042645.1_4987434_4987977_-	NA|72aa|up_9|NZ_CP042645.1_4946330_4946546_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|169aa|up_8|NZ_CP042645.1_4950517_4951024_-	PRK10201, PRK10201, G/U mismatch-specific DNA glycosylase	NA|66aa|up_7|NZ_CP042645.1_4952253_4952451_-	pfam06117, DUF957, Enterobacterial protein of unknown function (DUF957)	NA|126aa|up_6|NZ_CP042645.1_4952672_4953050_-	pfam06755, CbtA_toxin, CbtA_toxin of type IV toxin-antitoxin system	NA|102aa|up_5|NZ_CP042645.1_4953139_4953445_-	pfam06154, CbeA_antitoxin, CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A	NA|74aa|up_4|NZ_CP042645.1_4953586_4953808_-	pfam06174, DUF987, Protein of unknown function (DUF987)	NA|162aa|up_3|NZ_CP042645.1_4954366_4954852_-	pfam03230, Antirestrict, Antirestriction protein	NA|153aa|up_2|NZ_CP042645.1_4957051_4957510_-	NF033177, auto_Ag43, autotransporter adhesin Ag43	NA|519aa|up_1|NZ_CP042645.1_4960709_4962266_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)	NA|402aa|up_0|NZ_CP042645.1_4962262_4963468_+	cd17269, RMtype1_S_PluTORF4319P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Photorhabdus luminescens S subunit (S	NA|129aa|down_0|NZ_CP042645.1_4974476_4974863_+	NA	NA|64aa|down_1|NZ_CP042645.1_4974871_4975063_+	NA	NA|418aa|down_2|NZ_CP042645.1_4975140_4976394_+	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional	NA|596aa|down_3|NZ_CP042645.1_4976293_4978081_+	pfam13538, UvrD_C_2, UvrD-like helicase C-terminal domain	NA|475aa|down_4|NZ_CP042645.1_4978077_4979502_+	NA	NA|188aa|down_5|NZ_CP042645.1_4981249_4981813_-	pfam11726, Inovirus_Gp2, Inovirus Gp2	NA|76aa|down_6|NZ_CP042645.1_4984461_4984689_-	pfam13148, DUF3987, Protein of unknown function (DUF3987)	NA|76aa|down_7|NZ_CP042645.1_4984794_4985022_-	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|181aa|down_8|NZ_CP042645.1_4987434_4987977_-	NA	NA|241aa|down_9|NZ_CP042645.1_4989773_4990496_-	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism]
GCF_007998125.1_ASM799812v1	NZ_CP042645	Escherichia coli strain NCYU-21-79 chromosome, complete genome	11	4974267-4974397	10	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	AGACTACAAATAGACTACAATAA	23	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA,NA|129aa|down_0|NZ_CP042645.1_4974476_4974863_+,NA|64aa|down_1|NZ_CP042645.1_4974871_4975063_+,NA|475aa|down_4|NZ_CP042645.1_4978077_4979502_+,NA|181aa|down_8|NZ_CP042645.1_4987434_4987977_-	NA|72aa|up_9|NZ_CP042645.1_4946330_4946546_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|169aa|up_8|NZ_CP042645.1_4950517_4951024_-	PRK10201, PRK10201, G/U mismatch-specific DNA glycosylase	NA|66aa|up_7|NZ_CP042645.1_4952253_4952451_-	pfam06117, DUF957, Enterobacterial protein of unknown function (DUF957)	NA|126aa|up_6|NZ_CP042645.1_4952672_4953050_-	pfam06755, CbtA_toxin, CbtA_toxin of type IV toxin-antitoxin system	NA|102aa|up_5|NZ_CP042645.1_4953139_4953445_-	pfam06154, CbeA_antitoxin, CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A	NA|74aa|up_4|NZ_CP042645.1_4953586_4953808_-	pfam06174, DUF987, Protein of unknown function (DUF987)	NA|162aa|up_3|NZ_CP042645.1_4954366_4954852_-	pfam03230, Antirestrict, Antirestriction protein	NA|153aa|up_2|NZ_CP042645.1_4957051_4957510_-	NF033177, auto_Ag43, autotransporter adhesin Ag43	NA|519aa|up_1|NZ_CP042645.1_4960709_4962266_+	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)	NA|402aa|up_0|NZ_CP042645.1_4962262_4963468_+	cd17269, RMtype1_S_PluTORF4319P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Photorhabdus luminescens S subunit (S	NA|129aa|down_0|NZ_CP042645.1_4974476_4974863_+	NA	NA|64aa|down_1|NZ_CP042645.1_4974871_4975063_+	NA	NA|418aa|down_2|NZ_CP042645.1_4975140_4976394_+	PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional	NA|596aa|down_3|NZ_CP042645.1_4976293_4978081_+	pfam13538, UvrD_C_2, UvrD-like helicase C-terminal domain	NA|475aa|down_4|NZ_CP042645.1_4978077_4979502_+	NA	NA|188aa|down_5|NZ_CP042645.1_4981249_4981813_-	pfam11726, Inovirus_Gp2, Inovirus Gp2	NA|76aa|down_6|NZ_CP042645.1_4984461_4984689_-	pfam13148, DUF3987, Protein of unknown function (DUF3987)	NA|76aa|down_7|NZ_CP042645.1_4984794_4985022_-	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|181aa|down_8|NZ_CP042645.1_4987434_4987977_-	NA	NA|241aa|down_9|NZ_CP042645.1_4989773_4990496_-	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism]
