assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	1	251981-252072	1	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GCTCCGAAGATGCCAGCCCCGAAGACACCGGC	32	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|184aa|up_4|NZ_CP042468.1_243303_243855_+,NA|171aa|up_3|NZ_CP042468.1_244117_244630_+,NA|719aa|up_1|NZ_CP042468.1_245610_247767_+,NA|167aa|up_0|NZ_CP042468.1_247795_248296_+,NA|171aa|down_2|NZ_CP042468.1_254072_254585_+,NA|229aa|down_5|NZ_CP042468.1_257522_258209_+	NA|487aa|up_9|NZ_CP042468.1_236212_237673_+	COG0815, Lnt, Apolipoprotein N-acyltransferase [Cell envelope biogenesis, outer membrane]	NA|497aa|up_8|NZ_CP042468.1_237701_239192_-	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|332aa|up_7|NZ_CP042468.1_239209_240205_-	cd11375, Peptidase_M54, Peptidase family M54, also called archaemetzincins or archaelysins	NA|484aa|up_6|NZ_CP042468.1_240399_241851_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|460aa|up_5|NZ_CP042468.1_241927_243307_+	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB	NA|184aa|up_4|NZ_CP042468.1_243303_243855_+	NA	NA|171aa|up_3|NZ_CP042468.1_244117_244630_+	NA	NA|272aa|up_2|NZ_CP042468.1_244739_245555_-	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|719aa|up_1|NZ_CP042468.1_245610_247767_+	NA	NA|167aa|up_0|NZ_CP042468.1_247795_248296_+	NA	NA|417aa|down_0|NZ_CP042468.1_252232_253483_+	pfam13478, XdhC_C, XdhC Rossmann domain	NA|195aa|down_1|NZ_CP042468.1_253479_254064_+	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|171aa|down_2|NZ_CP042468.1_254072_254585_+	NA	NA|155aa|down_3|NZ_CP042468.1_254841_255306_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|739aa|down_4|NZ_CP042468.1_255302_257519_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|229aa|down_5|NZ_CP042468.1_257522_258209_+	NA	NA|551aa|down_6|NZ_CP042468.1_258856_260509_-	cd01301, rDP_like, renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics	NA|346aa|down_7|NZ_CP042468.1_260661_261699_+	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|1602aa|down_8|NZ_CP042468.1_261718_266524_-	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair]	NA|295aa|down_9|NZ_CP042468.1_266139_267024_-	COG0583, LysR, Transcriptional regulator [Transcription]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	2	258236-258343	2	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	AATCTCTGAGCTTCCGAGCCGCTCGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|719aa|up_8|NZ_CP042468.1_245610_247767_+,NA|167aa|up_7|NZ_CP042468.1_247795_248296_+,NA|171aa|up_3|NZ_CP042468.1_254072_254585_+,NA|229aa|up_0|NZ_CP042468.1_257522_258209_+,NA|292aa|down_6|NZ_CP042468.1_269911_270787_-,NA|367aa|down_7|NZ_CP042468.1_270906_272007_-	NA|272aa|up_9|NZ_CP042468.1_244739_245555_-	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|719aa|up_8|NZ_CP042468.1_245610_247767_+	NA	NA|167aa|up_7|NZ_CP042468.1_247795_248296_+	NA	NA|1278aa|up_6|NZ_CP042468.1_248415_252249_+	NF012211, tand_rpt_95, tandem-95 repeat protein	NA|417aa|up_5|NZ_CP042468.1_252232_253483_+	pfam13478, XdhC_C, XdhC Rossmann domain	NA|195aa|up_4|NZ_CP042468.1_253479_254064_+	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|171aa|up_3|NZ_CP042468.1_254072_254585_+	NA	NA|155aa|up_2|NZ_CP042468.1_254841_255306_+	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|739aa|up_1|NZ_CP042468.1_255302_257519_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|229aa|up_0|NZ_CP042468.1_257522_258209_+	NA	NA|551aa|down_0|NZ_CP042468.1_258856_260509_-	cd01301, rDP_like, renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics	NA|346aa|down_1|NZ_CP042468.1_260661_261699_+	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|1602aa|down_2|NZ_CP042468.1_261718_266524_-	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair]	NA|295aa|down_3|NZ_CP042468.1_266139_267024_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|338aa|down_4|NZ_CP042468.1_267062_268076_-	pfam08308, PEGA, PEGA domain	NA|588aa|down_5|NZ_CP042468.1_268057_269821_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|292aa|down_6|NZ_CP042468.1_269911_270787_-	NA	NA|367aa|down_7|NZ_CP042468.1_270906_272007_-	NA	NA|210aa|down_8|NZ_CP042468.1_272075_272705_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|638aa|down_9|NZ_CP042468.1_272707_274621_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	3	665921-666008	3	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	ACAAACTACGATTTGGGGGTCGTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|550aa|up_8|NZ_CP042468.1_650164_651814_+,NA|369aa|up_7|NZ_CP042468.1_652651_653758_-,NA|488aa|down_2|NZ_CP042468.1_668964_670428_+,NA|300aa|down_6|NZ_CP042468.1_674489_675389_-	NA|878aa|up_9|NZ_CP042468.1_647534_650168_+	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family	NA|550aa|up_8|NZ_CP042468.1_650164_651814_+	NA	NA|369aa|up_7|NZ_CP042468.1_652651_653758_-	NA	NA|451aa|up_6|NZ_CP042468.1_653760_655113_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|319aa|up_5|NZ_CP042468.1_655308_656265_+	pfam16811, TAtT, TRAP transporter T-component	NA|333aa|up_4|NZ_CP042468.1_656327_657326_+	cd13603, PBP2_TRAP_Siap_TeaA_like, Substrate-binding domain of a sialic acid binding Tripartite ATP-independent  Periplasmic transport system (SiaP) and related proteins; the type 2 periplasmic-binding protein fold	NA|364aa|up_3|NZ_CP042468.1_657535_658627_+	pfam04290, DctQ, Tripartite ATP-independent periplasmic transporters, DctQ component	NA|552aa|up_2|NZ_CP042468.1_659040_660696_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|1453aa|up_1|NZ_CP042468.1_660862_665221_+	sd00001, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|194aa|up_0|NZ_CP042468.1_665229_665811_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|522aa|down_0|NZ_CP042468.1_666221_667787_+	cd07099, ALDH_DDALDH, Methylomonas sp	NA|183aa|down_1|NZ_CP042468.1_667993_668542_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|488aa|down_2|NZ_CP042468.1_668964_670428_+	NA	NA|166aa|down_3|NZ_CP042468.1_670543_671041_+	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|423aa|down_4|NZ_CP042468.1_671080_672349_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|712aa|down_5|NZ_CP042468.1_672345_674481_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|300aa|down_6|NZ_CP042468.1_674489_675389_-	NA	NA|302aa|down_7|NZ_CP042468.1_675585_676491_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|326aa|down_8|NZ_CP042468.1_676502_677480_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|819aa|down_9|NZ_CP042468.1_677693_680150_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	4	687446-687509	4	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CTTAGTCACCCTTAGTCCCTCTTA	24	1	1	687470-687485	NZ_CP042468.1_687510-687525	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|300aa|up_6|NZ_CP042468.1_674489_675389_-,NA|352aa|down_0|NZ_CP042468.1_687526_688582_-,NA|190aa|down_2|NZ_CP042468.1_691398_691968_+,NA|214aa|down_3|NZ_CP042468.1_692049_692691_+	NA|166aa|up_9|NZ_CP042468.1_670543_671041_+	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|423aa|up_8|NZ_CP042468.1_671080_672349_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|712aa|up_7|NZ_CP042468.1_672345_674481_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|300aa|up_6|NZ_CP042468.1_674489_675389_-	NA	NA|302aa|up_5|NZ_CP042468.1_675585_676491_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|326aa|up_4|NZ_CP042468.1_676502_677480_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|819aa|up_3|NZ_CP042468.1_677693_680150_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|1160aa|up_2|NZ_CP042468.1_680195_683675_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|480aa|up_1|NZ_CP042468.1_685212_686652_-	pfam04773, FecR, FecR protein	NA|216aa|up_0|NZ_CP042468.1_686648_687296_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|352aa|down_0|NZ_CP042468.1_687526_688582_-	NA	NA|642aa|down_1|NZ_CP042468.1_689299_691225_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|190aa|down_2|NZ_CP042468.1_691398_691968_+	NA	NA|214aa|down_3|NZ_CP042468.1_692049_692691_+	NA	NA|215aa|down_4|NZ_CP042468.1_692817_693462_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|263aa|down_5|NZ_CP042468.1_693554_694343_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|602aa|down_6|NZ_CP042468.1_694366_696172_-	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|747aa|down_7|NZ_CP042468.1_696342_698583_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|654aa|down_8|NZ_CP042468.1_698609_700571_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|666aa|down_9|NZ_CP042468.1_700692_702690_-	pfam01841, Transglut_core, Transglutaminase-like superfamily
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	5	742495-742636	5	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CATCTTGCCCTCGTCTGCGAGAGCTGGAAGCACTCGCTCCGAAGACGTTTCG	52	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|176aa|up_0|NZ_CP042468.1_741675_742203_-,NA|208aa|down_0|NZ_CP042468.1_744733_745357_+,NA|256aa|down_4|NZ_CP042468.1_748652_749420_+,NA|104aa|down_5|NZ_CP042468.1_749635_749947_+,NA|297aa|down_6|NZ_CP042468.1_751242_752133_+	NA|402aa|up_9|NZ_CP042468.1_719986_721192_+	sd00006, TPR, Tetratricopeptide repeat	NA|107aa|up_8|NZ_CP042468.1_721204_721525_-	pfam04359, DUF493, Protein of unknown function (DUF493)	NA|199aa|up_7|NZ_CP042468.1_721593_722190_+	cd00555, Maf, Nucleotide binding protein Maf	NA|314aa|up_6|NZ_CP042468.1_722170_723112_+	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]	NA|1434aa|up_5|NZ_CP042468.1_723525_727827_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|464aa|up_4|NZ_CP042468.1_727849_729241_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|3083aa|up_3|NZ_CP042468.1_729823_739072_+	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|176aa|up_2|NZ_CP042468.1_739178_739706_+	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase	NA|524aa|up_1|NZ_CP042468.1_739914_741486_+	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|176aa|up_0|NZ_CP042468.1_741675_742203_-	NA	NA|208aa|down_0|NZ_CP042468.1_744733_745357_+	NA	NA|335aa|down_1|NZ_CP042468.1_745361_746366_-	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|143aa|down_2|NZ_CP042468.1_746727_747156_+	pfam07238, PilZ, PilZ domain	NA|433aa|down_3|NZ_CP042468.1_747205_748504_+	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|256aa|down_4|NZ_CP042468.1_748652_749420_+	NA	NA|104aa|down_5|NZ_CP042468.1_749635_749947_+	NA	NA|297aa|down_6|NZ_CP042468.1_751242_752133_+	NA	NA|391aa|down_7|NZ_CP042468.1_752142_753315_+	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain	NA|1209aa|down_8|NZ_CP042468.1_753380_757007_+	COG0402, SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]	NA|188aa|down_9|NZ_CP042468.1_757304_757868_+	pfam11838, ERAP1_C, ERAP1-like C-terminal domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	6	780918-781097	6	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GTAGTAGGGTTGCTGTTGGAATTGCGG	27	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|144aa|up_1|NZ_CP042468.1_776172_776604_+,NA	NA|290aa|up_9|NZ_CP042468.1_760834_761704_+	PRK08116, PRK08116, hypothetical protein; Validated	NA|633aa|up_8|NZ_CP042468.1_761793_763692_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|661aa|up_7|NZ_CP042468.1_763970_765953_-	pfam00932, LTD, Lamin Tail Domain	NA|685aa|up_6|NZ_CP042468.1_766085_768140_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|271aa|up_5|NZ_CP042468.1_768231_769044_+	pfam13709, DUF4159, Domain of unknown function (DUF4159)	NA|780aa|up_4|NZ_CP042468.1_769047_771387_+	pfam07090, GATase1_like, Putative glutamine amidotransferase	NA|1090aa|up_3|NZ_CP042468.1_771568_774838_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|233aa|up_2|NZ_CP042468.1_774963_775662_+	pfam01904, DUF72, Protein of unknown function DUF72	NA|144aa|up_1|NZ_CP042468.1_776172_776604_+	NA	NA|256aa|up_0|NZ_CP042468.1_778242_779010_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|118aa|down_0|NZ_CP042468.1_781464_781818_-	PRK10618, PRK10618, phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional	NA|154aa|down_1|NZ_CP042468.1_782770_783232_+	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|62aa|down_2|NZ_CP042468.1_783248_783434_+	pfam10186, Atg14, Vacuolar sorting 38 and autophagy-related subunit 14	NA|331aa|down_3|NZ_CP042468.1_783539_784532_+	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate	NA|515aa|down_4|NZ_CP042468.1_784550_786095_+	cd03791, GT5_Glycogen_synthase_DULL1-like, Glycogen synthase GlgA and similar proteins	NA|515aa|down_5|NZ_CP042468.1_786216_787761_+	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit	NA|130aa|down_6|NZ_CP042468.1_788005_788395_-	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|142aa|down_7|NZ_CP042468.1_788649_789075_+	pfam01124, MAPEG, MAPEG family	NA|122aa|down_8|NZ_CP042468.1_789052_789418_+	pfam00403, HMA, Heavy-metal-associated domain	NA|108aa|down_9|NZ_CP042468.1_789492_789816_-	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	7	953379-953474	7	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	TTGCCCTCGTCTGCGAGAGCTGGAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|431aa|up_8|NZ_CP042468.1_942637_943930_+,NA|260aa|down_0|NZ_CP042468.1_953942_954722_-,NA|492aa|down_4|NZ_CP042468.1_960018_961494_-,NA|350aa|down_5|NZ_CP042468.1_961772_962822_-,NA|352aa|down_6|NZ_CP042468.1_963020_964076_-	NA|209aa|up_9|NZ_CP042468.1_941951_942578_+	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III	NA|431aa|up_8|NZ_CP042468.1_942637_943930_+	NA	NA|511aa|up_7|NZ_CP042468.1_943987_945520_+	pfam00034, Cytochrom_C, Cytochrome c	NA|626aa|up_6|NZ_CP042468.1_945730_947608_+	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|557aa|up_5|NZ_CP042468.1_947684_949355_+	TIGR02891, Probable_cytochrome_c_oxidase_subunit_1-beta, cytochrome c oxidase, subunit I	NA|212aa|up_4|NZ_CP042468.1_949442_950078_+	cd02864, Heme_Cu_Oxidase_III_1, Heme-copper oxidase subunit III subfamily	NA|115aa|up_3|NZ_CP042468.1_950185_950530_+	pfam03626, COX4_pro, Prokaryotic Cytochrome C oxidase subunit IV	NA|345aa|up_2|NZ_CP042468.1_950582_951617_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|216aa|up_1|NZ_CP042468.1_951674_952322_+	PRK05089, PRK05089, cytochrome C oxidase assembly protein; Provisional	NA|305aa|up_0|NZ_CP042468.1_952396_953311_+	cd06662, SURF1, SURF1 superfamily	NA|260aa|down_0|NZ_CP042468.1_953942_954722_-	NA	NA|338aa|down_1|NZ_CP042468.1_955115_956129_-	pfam13478, XdhC_C, XdhC Rossmann domain	NA|774aa|down_2|NZ_CP042468.1_956135_958457_-	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit	NA|498aa|down_3|NZ_CP042468.1_958512_960006_-	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit	NA|492aa|down_4|NZ_CP042468.1_960018_961494_-	NA	NA|350aa|down_5|NZ_CP042468.1_961772_962822_-	NA	NA|352aa|down_6|NZ_CP042468.1_963020_964076_-	NA	NA|250aa|down_7|NZ_CP042468.1_965435_966185_-	sd00006, TPR, Tetratricopeptide repeat	NA|454aa|down_8|NZ_CP042468.1_966214_967576_-	pfam11617, Cu-binding_MopE, Putative metal-binding motif	NA|433aa|down_9|NZ_CP042468.1_967590_968889_-	pfam11617, Cu-binding_MopE, Putative metal-binding motif
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	8	1123453-1123743	1	CRT	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	TCTTCTTCGAGNTCTTCG	18	0	0	NA	NA	NA	4	4	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|112aa|up_6|NZ_CP042468.1_1104164_1104500_-,NA|224aa|up_5|NZ_CP042468.1_1104871_1105543_+,NA|535aa|up_1|NZ_CP042468.1_1109560_1111165_+,NA|226aa|down_1|NZ_CP042468.1_1126055_1126733_-,NA|96aa|down_3|NZ_CP042468.1_1128967_1129255_-,NA|111aa|down_6|NZ_CP042468.1_1136393_1136726_-,NA|530aa|down_8|NZ_CP042468.1_1137682_1139272_+	NA|670aa|up_9|NZ_CP042468.1_1098112_1100122_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|861aa|up_8|NZ_CP042468.1_1100395_1102978_+	cd07574, nitrilase_Rim1_like, Uncharacterized subgroup of the nitrilase superfamily; some members of this subgroup have an N-terminal RimI domain (class 12 nitrilases)	NA|378aa|up_7|NZ_CP042468.1_1103009_1104143_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|112aa|up_6|NZ_CP042468.1_1104164_1104500_-	NA	NA|224aa|up_5|NZ_CP042468.1_1104871_1105543_+	NA	NA|422aa|up_4|NZ_CP042468.1_1105744_1107010_+	COG1232, HemY, Protoporphyrinogen oxidase [Coenzyme metabolism]	NA|464aa|up_3|NZ_CP042468.1_1107017_1108409_-	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|199aa|up_2|NZ_CP042468.1_1108488_1109085_-	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown]	NA|535aa|up_1|NZ_CP042468.1_1109560_1111165_+	NA	NA|283aa|up_0|NZ_CP042468.1_1111257_1112106_-	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase	NA|316aa|down_0|NZ_CP042468.1_1124939_1125887_-	sd00006, TPR, Tetratricopeptide repeat	NA|226aa|down_1|NZ_CP042468.1_1126055_1126733_-	NA	NA|736aa|down_2|NZ_CP042468.1_1126633_1128841_-	pfam00498, FHA, FHA domain	NA|96aa|down_3|NZ_CP042468.1_1128967_1129255_-	NA	NA|531aa|down_4|NZ_CP042468.1_1129550_1131143_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|1205aa|down_5|NZ_CP042468.1_1131163_1134778_-	sd00006, TPR, Tetratricopeptide repeat	NA|111aa|down_6|NZ_CP042468.1_1136393_1136726_-	NA	NA|109aa|down_7|NZ_CP042468.1_1136993_1137320_-	PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed	NA|530aa|down_8|NZ_CP042468.1_1137682_1139272_+	NA	NA|143aa|down_9|NZ_CP042468.1_1139290_1139719_-	PRK12497, PRK12497, YraN family protein
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	9	1254954-1255154	1	PILER-CR	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGACAACGACTGCGACGGCCAAACCGACGAGGG	33	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|301aa|up_6|NZ_CP042468.1_1231833_1232736_+,NA|87aa|up_5|NZ_CP042468.1_1233209_1233470_-,NA|259aa|down_2|NZ_CP042468.1_1262631_1263408_-,NA|164aa|down_6|NZ_CP042468.1_1270712_1271204_-	NA|508aa|up_9|NZ_CP042468.1_1227308_1228832_-	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|184aa|up_8|NZ_CP042468.1_1229249_1229801_+	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed	NA|568aa|up_7|NZ_CP042468.1_1230022_1231726_+	cd05804, StaR_like, StaR_like; a well-conserved protein found in bacteria, plants, and animals	NA|301aa|up_6|NZ_CP042468.1_1231833_1232736_+	NA	NA|87aa|up_5|NZ_CP042468.1_1233209_1233470_-	NA	NA|1127aa|up_4|NZ_CP042468.1_1234478_1237859_-	pfam17963, Big_9, Bacterial Ig domain	NA|781aa|up_3|NZ_CP042468.1_1238064_1240407_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|1142aa|up_2|NZ_CP042468.1_1240403_1243829_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|1110aa|up_1|NZ_CP042468.1_1244052_1247382_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|1049aa|up_0|NZ_CP042468.1_1247669_1250816_+	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|1054aa|down_0|NZ_CP042468.1_1256181_1259343_+	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|345aa|down_1|NZ_CP042468.1_1261600_1262635_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|259aa|down_2|NZ_CP042468.1_1262631_1263408_-	NA	NA|224aa|down_3|NZ_CP042468.1_1263485_1264157_-	PRK00043, thiE, thiamine phosphate synthase	NA|326aa|down_4|NZ_CP042468.1_1264157_1265135_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|1626aa|down_5|NZ_CP042468.1_1265481_1270359_-	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain	NA|164aa|down_6|NZ_CP042468.1_1270712_1271204_-	NA	NA|198aa|down_7|NZ_CP042468.1_1271495_1272089_+	PRK06754, mtnB, methylthioribulose 1-phosphate dehydratase	NA|388aa|down_8|NZ_CP042468.1_1272270_1273434_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|1080aa|down_9|NZ_CP042468.1_1273848_1277088_+	pfam11617, Cu-binding_MopE, Putative metal-binding motif
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	10	1272137-1272257	8	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGCGCGACACCTCCCCAGCGTTGAACACGCTGGGGAGGAGCCT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|259aa|up_5|NZ_CP042468.1_1262631_1263408_-,NA|164aa|up_1|NZ_CP042468.1_1270712_1271204_-,NA|109aa|down_5|NZ_CP042468.1_1282154_1282481_+,NA|1220aa|down_7|NZ_CP042468.1_1283871_1287531_-	NA|1049aa|up_9|NZ_CP042468.1_1247669_1250816_+	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|1652aa|up_8|NZ_CP042468.1_1251045_1256001_+	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|1054aa|up_7|NZ_CP042468.1_1256181_1259343_+	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|345aa|up_6|NZ_CP042468.1_1261600_1262635_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|259aa|up_5|NZ_CP042468.1_1262631_1263408_-	NA	NA|224aa|up_4|NZ_CP042468.1_1263485_1264157_-	PRK00043, thiE, thiamine phosphate synthase	NA|326aa|up_3|NZ_CP042468.1_1264157_1265135_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|1626aa|up_2|NZ_CP042468.1_1265481_1270359_-	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain	NA|164aa|up_1|NZ_CP042468.1_1270712_1271204_-	NA	NA|198aa|up_0|NZ_CP042468.1_1271495_1272089_+	PRK06754, mtnB, methylthioribulose 1-phosphate dehydratase	NA|388aa|down_0|NZ_CP042468.1_1272270_1273434_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|1080aa|down_1|NZ_CP042468.1_1273848_1277088_+	pfam11617, Cu-binding_MopE, Putative metal-binding motif	NA|1162aa|down_2|NZ_CP042468.1_1277206_1280692_+	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins	NA|299aa|down_3|NZ_CP042468.1_1280836_1281733_+	cd09010, MTAP_SsMTAPII_like_MTIP, 5'-deoxy-5'-methylthioadenosine phosphorylases (MTAP) similar to Sulfolobus solfataricus MTAPII and Pseudomonas aeruginosa PAO1 5'-methylthioinosine phosphorylase (MTIP)	NA|93aa|down_4|NZ_CP042468.1_1281809_1282088_+	TIGR02949, putative_anti-sigma_factor, anti-sigma factor, TIGR02949 family	NA|109aa|down_5|NZ_CP042468.1_1282154_1282481_+	NA	NA|424aa|down_6|NZ_CP042468.1_1282515_1283787_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|1220aa|down_7|NZ_CP042468.1_1283871_1287531_-	NA	NA|650aa|down_8|NZ_CP042468.1_1287680_1289630_+	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein	NA|338aa|down_9|NZ_CP042468.1_1289721_1290735_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	11	1347180-1347282	9	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GGCGGCCTCGGCGCGCTCAGCGGCCTGG	28	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|71aa|up_8|NZ_CP042468.1_1332395_1332608_-,NA|161aa|up_7|NZ_CP042468.1_1332686_1333169_-,NA|187aa|up_5|NZ_CP042468.1_1334679_1335240_+,NA|203aa|down_8|NZ_CP042468.1_1357558_1358167_+	NA|415aa|up_9|NZ_CP042468.1_1330801_1332046_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|71aa|up_8|NZ_CP042468.1_1332395_1332608_-	NA	NA|161aa|up_7|NZ_CP042468.1_1332686_1333169_-	NA	NA|299aa|up_6|NZ_CP042468.1_1333615_1334512_+	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|187aa|up_5|NZ_CP042468.1_1334679_1335240_+	NA	NA|717aa|up_4|NZ_CP042468.1_1335236_1337387_-	cd10796, GH57N_APU, N-terminal catalytic domain of thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57)	NA|412aa|up_3|NZ_CP042468.1_1337391_1338627_-	PRK00844, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|536aa|up_2|NZ_CP042468.1_1338698_1340306_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|556aa|up_1|NZ_CP042468.1_1340496_1342164_-	cd07302, CHD, cyclase homology domain	NA|342aa|up_0|NZ_CP042468.1_1344268_1345294_+	TIGR01713, Type_II_secretion_system_protein_C, type II secretion system protein C	NA|579aa|down_0|NZ_CP042468.1_1348016_1349753_+	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|410aa|down_1|NZ_CP042468.1_1349752_1350982_+	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|146aa|down_2|NZ_CP042468.1_1351049_1351487_+	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|234aa|down_3|NZ_CP042468.1_1351837_1352539_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|208aa|down_4|NZ_CP042468.1_1352519_1353143_+	COG4967, PilV, Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|288aa|down_5|NZ_CP042468.1_1353139_1354003_+	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]	NA|536aa|down_6|NZ_CP042468.1_1354005_1355613_+	pfam03934, T2SSK, Type II secretion system (T2SS), protein K	NA|605aa|down_7|NZ_CP042468.1_1355744_1357559_+	pfam11104, PilM_2, Type IV pilus assembly protein PilM;	NA|203aa|down_8|NZ_CP042468.1_1357558_1358167_+	NA	NA|369aa|down_9|NZ_CP042468.1_1358170_1359277_+	TIGR04411, hypothetical_protein, type II secretion system protein N, Leptospira/Geobacter-type
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	12	1359862-1359964	10	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GGCTTGTCCCGCGGGTGAATGAGCCTGTGTAGCTA	35	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|203aa|up_2|NZ_CP042468.1_1357558_1358167_+,NA|129aa|up_0|NZ_CP042468.1_1359442_1359829_+,NA|177aa|down_1|NZ_CP042468.1_1361339_1361870_-,NA|40aa|down_2|NZ_CP042468.1_1362156_1362276_-,NA|366aa|down_5|NZ_CP042468.1_1367722_1368820_+,NA|341aa|down_9|NZ_CP042468.1_1372818_1373841_-	NA|410aa|up_9|NZ_CP042468.1_1349752_1350982_+	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|146aa|up_8|NZ_CP042468.1_1351049_1351487_+	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|234aa|up_7|NZ_CP042468.1_1351837_1352539_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|208aa|up_6|NZ_CP042468.1_1352519_1353143_+	COG4967, PilV, Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|288aa|up_5|NZ_CP042468.1_1353139_1354003_+	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]	NA|536aa|up_4|NZ_CP042468.1_1354005_1355613_+	pfam03934, T2SSK, Type II secretion system (T2SS), protein K	NA|605aa|up_3|NZ_CP042468.1_1355744_1357559_+	pfam11104, PilM_2, Type IV pilus assembly protein PilM;	NA|203aa|up_2|NZ_CP042468.1_1357558_1358167_+	NA	NA|369aa|up_1|NZ_CP042468.1_1358170_1359277_+	TIGR04411, hypothetical_protein, type II secretion system protein N, Leptospira/Geobacter-type	NA|129aa|up_0|NZ_CP042468.1_1359442_1359829_+	NA	NA|332aa|down_0|NZ_CP042468.1_1360347_1361343_-	pfam00665, rve, Integrase core domain	NA|177aa|down_1|NZ_CP042468.1_1361339_1361870_-	NA	NA|40aa|down_2|NZ_CP042468.1_1362156_1362276_-	NA	NA|545aa|down_3|NZ_CP042468.1_1362514_1364149_+	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional	NA|966aa|down_4|NZ_CP042468.1_1364608_1367506_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|366aa|down_5|NZ_CP042468.1_1367722_1368820_+	NA	NA|487aa|down_6|NZ_CP042468.1_1368793_1370254_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|476aa|down_7|NZ_CP042468.1_1370253_1371681_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|382aa|down_8|NZ_CP042468.1_1371676_1372822_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|341aa|down_9|NZ_CP042468.1_1372818_1373841_-	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	13	1776162-1776246	11	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CTGCGAGCGCTGGAAGCACCCGC	23	1	4	1776185-1776223|1776185-1776223|1776185-1776223|1776185-1776223	NZ_CP042468.1_210886-210848|NZ_CP042468.1_210948-210910|NZ_CP042468.1_211010-210972|NZ_CP042468.1_1779442-1779404	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|192aa|up_9|NZ_CP042468.1_1763036_1763612_-,NA|158aa|up_5|NZ_CP042468.1_1768587_1769061_+,NA|92aa|down_6|NZ_CP042468.1_1787149_1787425_+	NA|192aa|up_9|NZ_CP042468.1_1763036_1763612_-	NA	NA|400aa|up_8|NZ_CP042468.1_1763670_1764870_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|538aa|up_7|NZ_CP042468.1_1765244_1766858_+	PRK09255, PRK09255, malate synthase; Validated	NA|429aa|up_6|NZ_CP042468.1_1766993_1768280_+	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|158aa|up_5|NZ_CP042468.1_1768587_1769061_+	NA	NA|325aa|up_4|NZ_CP042468.1_1769100_1770075_+	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases	NA|607aa|up_3|NZ_CP042468.1_1770185_1772006_+	pfam10092, DUF2330, Uncharacterized protein conserved in bacteria (DUF2330)	NA|337aa|up_2|NZ_CP042468.1_1772233_1773244_-	cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|337aa|up_1|NZ_CP042468.1_1773350_1774361_+	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	NA|483aa|up_0|NZ_CP042468.1_1774467_1775916_+	PLN02880, PLN02880, tyrosine decarboxylase	NA|624aa|down_0|NZ_CP042468.1_1776271_1778143_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|360aa|down_1|NZ_CP042468.1_1778139_1779219_-	COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|625aa|down_2|NZ_CP042468.1_1779680_1781555_-	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|322aa|down_3|NZ_CP042468.1_1781625_1782591_-	pfam08308, PEGA, PEGA domain	NA|611aa|down_4|NZ_CP042468.1_1782565_1784398_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|799aa|down_5|NZ_CP042468.1_1784581_1786978_-	sd00001, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|92aa|down_6|NZ_CP042468.1_1787149_1787425_+	NA	NA|479aa|down_7|NZ_CP042468.1_1787432_1788869_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|130aa|down_8|NZ_CP042468.1_1788868_1789258_+	PRK06228, PRK06228, F0F1 ATP synthase subunit epsilon; Validated	NA|101aa|down_9|NZ_CP042468.1_1789254_1789557_+	TIGR02230, H+-transporting_ATP_synthase_gene_1, F0F1-ATPase subunit, putative
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	14	2090550-2090674	12	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGAGGACGCCCCAGGGCGGGCGGGGACGCCCGCGCCCCGGCGG	43	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|673aa|up_5|NZ_CP042468.1_2082770_2084789_-,NA|196aa|down_0|NZ_CP042468.1_2090693_2091281_-,NA|77aa|down_7|NZ_CP042468.1_2110365_2110596_+	NA|677aa|up_9|NZ_CP042468.1_2075414_2077445_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|359aa|up_8|NZ_CP042468.1_2077413_2078490_-	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|511aa|up_7|NZ_CP042468.1_2078588_2080121_+	pfam12388, Peptidase_M57, Dual-action HEIGH metallo-peptidase	NA|744aa|up_6|NZ_CP042468.1_2080447_2082679_+	cd16148, sulfatase_like, uncharacterized sulfatase subfamily	NA|673aa|up_5|NZ_CP042468.1_2082770_2084789_-	NA	NA|103aa|up_4|NZ_CP042468.1_2085134_2085443_+	pfam14114, DUF4286, Domain of unknown function (DUF4286)	NA|513aa|up_3|NZ_CP042468.1_2085583_2087122_-	pfam12034, DUF3520, Domain of unknown function (DUF3520)	NA|225aa|up_2|NZ_CP042468.1_2087511_2088186_+	COG4619, COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|266aa|up_1|NZ_CP042468.1_2088182_2088980_+	pfam03649, UPF0014, Uncharacterized protein family (UPF0014)	NA|215aa|up_0|NZ_CP042468.1_2088972_2089617_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|196aa|down_0|NZ_CP042468.1_2090693_2091281_-	NA	NA|1839aa|down_1|NZ_CP042468.1_2091700_2097217_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|340aa|down_2|NZ_CP042468.1_2097456_2098476_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|341aa|down_3|NZ_CP042468.1_2098472_2099495_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|1847aa|down_4|NZ_CP042468.1_2099539_2105080_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|109aa|down_5|NZ_CP042468.1_2105482_2105809_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|1229aa|down_6|NZ_CP042468.1_2106396_2110083_-	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|77aa|down_7|NZ_CP042468.1_2110365_2110596_+	NA	NA|397aa|down_8|NZ_CP042468.1_2110682_2111873_+	pfam05616, Neisseria_TspB, Neisseria meningitidis TspB protein	NA|415aa|down_9|NZ_CP042468.1_2112002_2113247_+	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	15	2142624-2142793	13	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGCTCCAGAGATTGCTCGCCGACGCTCCAGAGATTGCTCGCC	42	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|483aa|down_3|NZ_CP042468.1_2150729_2152178_+,NA|435aa|down_4|NZ_CP042468.1_2152662_2153967_-,NA|452aa|down_8|NZ_CP042468.1_2158229_2159585_-	NA|362aa|up_9|NZ_CP042468.1_2129469_2130555_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|449aa|up_8|NZ_CP042468.1_2130643_2131990_-	cd12176, PGDH_3, Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains	NA|566aa|up_7|NZ_CP042468.1_2132284_2133982_-	cd03680, MM_CoA_mutase_ICM_like, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM	NA|174aa|up_6|NZ_CP042468.1_2134085_2134607_-	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase	NA|507aa|up_5|NZ_CP042468.1_2134610_2136131_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|110aa|up_4|NZ_CP042468.1_2136300_2136630_-	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain	NA|213aa|up_3|NZ_CP042468.1_2136791_2137430_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|446aa|up_2|NZ_CP042468.1_2137701_2139039_+	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner	NA|317aa|up_1|NZ_CP042468.1_2139107_2140058_-	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau	NA|797aa|up_0|NZ_CP042468.1_2140134_2142525_-	smart00701, PGRP, Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme	NA|141aa|down_0|NZ_CP042468.1_2143002_2143425_-	PRK05578, PRK05578, cytidine deaminase; Validated	NA|275aa|down_1|NZ_CP042468.1_2143584_2144409_-	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA)	NA|488aa|down_2|NZ_CP042468.1_2144746_2146210_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|483aa|down_3|NZ_CP042468.1_2150729_2152178_+	NA	NA|435aa|down_4|NZ_CP042468.1_2152662_2153967_-	NA	NA|281aa|down_5|NZ_CP042468.1_2153963_2154806_-	pfam00487, FA_desaturase, Fatty acid desaturase	NA|701aa|down_6|NZ_CP042468.1_2155039_2157142_+	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|375aa|down_7|NZ_CP042468.1_2157108_2158233_+	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates	NA|452aa|down_8|NZ_CP042468.1_2158229_2159585_-	NA	NA|247aa|down_9|NZ_CP042468.1_2159581_2160322_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	16	2144479-2144560	14	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GGGCCCCTCCGGCGGCTCAGCTACG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|483aa|down_1|NZ_CP042468.1_2150729_2152178_+,NA|435aa|down_2|NZ_CP042468.1_2152662_2153967_-,NA|452aa|down_6|NZ_CP042468.1_2158229_2159585_-,NA|301aa|down_8|NZ_CP042468.1_2160675_2161578_+	NA|566aa|up_9|NZ_CP042468.1_2132284_2133982_-	cd03680, MM_CoA_mutase_ICM_like, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM	NA|174aa|up_8|NZ_CP042468.1_2134085_2134607_-	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase	NA|507aa|up_7|NZ_CP042468.1_2134610_2136131_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|110aa|up_6|NZ_CP042468.1_2136300_2136630_-	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain	NA|213aa|up_5|NZ_CP042468.1_2136791_2137430_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|446aa|up_4|NZ_CP042468.1_2137701_2139039_+	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner	NA|317aa|up_3|NZ_CP042468.1_2139107_2140058_-	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau	NA|797aa|up_2|NZ_CP042468.1_2140134_2142525_-	smart00701, PGRP, Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme	NA|141aa|up_1|NZ_CP042468.1_2143002_2143425_-	PRK05578, PRK05578, cytidine deaminase; Validated	NA|275aa|up_0|NZ_CP042468.1_2143584_2144409_-	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA)	NA|488aa|down_0|NZ_CP042468.1_2144746_2146210_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|483aa|down_1|NZ_CP042468.1_2150729_2152178_+	NA	NA|435aa|down_2|NZ_CP042468.1_2152662_2153967_-	NA	NA|281aa|down_3|NZ_CP042468.1_2153963_2154806_-	pfam00487, FA_desaturase, Fatty acid desaturase	NA|701aa|down_4|NZ_CP042468.1_2155039_2157142_+	PRK01372, ddl, D-alanine--D-alanine ligase; Reviewed	NA|375aa|down_5|NZ_CP042468.1_2157108_2158233_+	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates	NA|452aa|down_6|NZ_CP042468.1_2158229_2159585_-	NA	NA|247aa|down_7|NZ_CP042468.1_2159581_2160322_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|301aa|down_8|NZ_CP042468.1_2160675_2161578_+	NA	NA|586aa|down_9|NZ_CP042468.1_2161601_2163359_+	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	17	2182823-2182897	15	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GACGGCGAGGAAGTCAACGACCAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|344aa|up_9|NZ_CP042468.1_2164352_2165384_+,NA|862aa|up_8|NZ_CP042468.1_2165385_2167971_+,NA|723aa|up_7|NZ_CP042468.1_2167986_2170155_+,NA|269aa|up_6|NZ_CP042468.1_2170210_2171017_+,NA|753aa|up_5|NZ_CP042468.1_2171110_2173369_-,NA|162aa|up_4|NZ_CP042468.1_2173405_2173891_-,NA|115aa|down_3|NZ_CP042468.1_2190280_2190625_+,NA|75aa|down_4|NZ_CP042468.1_2190757_2190982_+,NA|184aa|down_5|NZ_CP042468.1_2191069_2191621_+,NA|323aa|down_6|NZ_CP042468.1_2191610_2192579_+,NA|270aa|down_7|NZ_CP042468.1_2193019_2193829_+	NA|344aa|up_9|NZ_CP042468.1_2164352_2165384_+	NA	NA|862aa|up_8|NZ_CP042468.1_2165385_2167971_+	NA	NA|723aa|up_7|NZ_CP042468.1_2167986_2170155_+	NA	NA|269aa|up_6|NZ_CP042468.1_2170210_2171017_+	NA	NA|753aa|up_5|NZ_CP042468.1_2171110_2173369_-	NA	NA|162aa|up_4|NZ_CP042468.1_2173405_2173891_-	NA	NA|381aa|up_3|NZ_CP042468.1_2173944_2175087_-	pfam09594, GT87, Glycosyltransferase family 87	NA|917aa|up_2|NZ_CP042468.1_2175076_2177827_-	PRK09277, PRK09277, aconitate hydratase AcnA	NA|253aa|up_1|NZ_CP042468.1_2178236_2178995_+	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins	NA|305aa|up_0|NZ_CP042468.1_2179059_2179974_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|345aa|down_0|NZ_CP042468.1_2186026_2187061_+	pfam17964, Big_10, Bacterial Ig domain	NA|597aa|down_1|NZ_CP042468.1_2187335_2189126_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|130aa|down_2|NZ_CP042468.1_2189443_2189833_+	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|115aa|down_3|NZ_CP042468.1_2190280_2190625_+	NA	NA|75aa|down_4|NZ_CP042468.1_2190757_2190982_+	NA	NA|184aa|down_5|NZ_CP042468.1_2191069_2191621_+	NA	NA|323aa|down_6|NZ_CP042468.1_2191610_2192579_+	NA	NA|270aa|down_7|NZ_CP042468.1_2193019_2193829_+	NA	NA|232aa|down_8|NZ_CP042468.1_2194756_2195452_+	pfam13146, TRL, TRL-like protein family	NA|1731aa|down_9|NZ_CP042468.1_2195363_2200556_-	pfam01683, EB, EB module
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	18	2317527-2317615	16	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GTCCAATTCACCATTTGTGGTGATT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|63aa|up_6|NZ_CP042468.1_2307464_2307653_+,NA|600aa|up_1|NZ_CP042468.1_2314541_2316341_-,NA|346aa|up_0|NZ_CP042468.1_2316446_2317484_-,NA|115aa|down_3|NZ_CP042468.1_2323778_2324123_-,NA|353aa|down_5|NZ_CP042468.1_2325572_2326631_-	NA|182aa|up_9|NZ_CP042468.1_2304648_2305194_-	PRK13429, PRK13429, F0F1 ATP synthase subunit delta; Provisional	NA|203aa|up_8|NZ_CP042468.1_2305259_2305868_-	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b	NA|161aa|up_7|NZ_CP042468.1_2305939_2306422_-	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b	NA|63aa|up_6|NZ_CP042468.1_2307464_2307653_+	NA	NA|962aa|up_5|NZ_CP042468.1_2307847_2310733_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|407aa|up_4|NZ_CP042468.1_2311097_2312318_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|468aa|up_3|NZ_CP042468.1_2312329_2313733_+	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated	NA|210aa|up_2|NZ_CP042468.1_2313878_2314508_-	cd00454, TrHb1_N, truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 1 (N)	NA|600aa|up_1|NZ_CP042468.1_2314541_2316341_-	NA	NA|346aa|up_0|NZ_CP042468.1_2316446_2317484_-	NA	NA|421aa|down_0|NZ_CP042468.1_2317660_2318923_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|649aa|down_1|NZ_CP042468.1_2319277_2321224_-	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product	NA|693aa|down_2|NZ_CP042468.1_2321549_2323628_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|115aa|down_3|NZ_CP042468.1_2323778_2324123_-	NA	NA|339aa|down_4|NZ_CP042468.1_2324353_2325370_+	PRK08997, PRK08997, isocitrate dehydrogenase; Provisional	NA|353aa|down_5|NZ_CP042468.1_2325572_2326631_-	NA	NA|354aa|down_6|NZ_CP042468.1_2326670_2327732_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|486aa|down_7|NZ_CP042468.1_2327938_2329396_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|477aa|down_8|NZ_CP042468.1_2329608_2331039_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|97aa|down_9|NZ_CP042468.1_2331281_2331572_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	19	2331146-2331243	17	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	TCCTTAATTGCTTATGTAGCAGGCGTTGCAAATC	34	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|346aa|up_9|NZ_CP042468.1_2316446_2317484_-,NA|115aa|up_5|NZ_CP042468.1_2323778_2324123_-,NA|353aa|up_3|NZ_CP042468.1_2325572_2326631_-,NA|220aa|down_1|NZ_CP042468.1_2331956_2332616_+,NA|357aa|down_3|NZ_CP042468.1_2333445_2334516_+,NA|320aa|down_6|NZ_CP042468.1_2339250_2340210_+,NA|655aa|down_7|NZ_CP042468.1_2340390_2342355_+	NA|346aa|up_9|NZ_CP042468.1_2316446_2317484_-	NA	NA|421aa|up_8|NZ_CP042468.1_2317660_2318923_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|649aa|up_7|NZ_CP042468.1_2319277_2321224_-	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product	NA|693aa|up_6|NZ_CP042468.1_2321549_2323628_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|115aa|up_5|NZ_CP042468.1_2323778_2324123_-	NA	NA|339aa|up_4|NZ_CP042468.1_2324353_2325370_+	PRK08997, PRK08997, isocitrate dehydrogenase; Provisional	NA|353aa|up_3|NZ_CP042468.1_2325572_2326631_-	NA	NA|354aa|up_2|NZ_CP042468.1_2326670_2327732_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|486aa|up_1|NZ_CP042468.1_2327938_2329396_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|477aa|up_0|NZ_CP042468.1_2329608_2331039_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|97aa|down_0|NZ_CP042468.1_2331281_2331572_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|220aa|down_1|NZ_CP042468.1_2331956_2332616_+	NA	NA|267aa|down_2|NZ_CP042468.1_2332619_2333420_+	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins	NA|357aa|down_3|NZ_CP042468.1_2333445_2334516_+	NA	NA|656aa|down_4|NZ_CP042468.1_2335277_2337245_-	cd16148, sulfatase_like, uncharacterized sulfatase subfamily	NA|581aa|down_5|NZ_CP042468.1_2337271_2339014_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|320aa|down_6|NZ_CP042468.1_2339250_2340210_+	NA	NA|655aa|down_7|NZ_CP042468.1_2340390_2342355_+	NA	NA|790aa|down_8|NZ_CP042468.1_2342420_2344790_+	cd10318, RGL11, Rhamnogalacturonan lyase of the polysaccharide lyase family 11	NA|70aa|down_9|NZ_CP042468.1_2345057_2345267_+	pfam00313, CSD, 'Cold-shock' DNA-binding domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	20	2346422-2346513	18	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GTTCAGGTTGTCGGCCGCCTCGA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|220aa|up_8|NZ_CP042468.1_2331956_2332616_+,NA|357aa|up_6|NZ_CP042468.1_2333445_2334516_+,NA|320aa|up_3|NZ_CP042468.1_2339250_2340210_+,NA|655aa|up_2|NZ_CP042468.1_2340390_2342355_+,NA|796aa|down_3|NZ_CP042468.1_2354785_2357173_-,NA|275aa|down_4|NZ_CP042468.1_2357680_2358505_-,NA|133aa|down_8|NZ_CP042468.1_2366724_2367123_+	NA|97aa|up_9|NZ_CP042468.1_2331281_2331572_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|220aa|up_8|NZ_CP042468.1_2331956_2332616_+	NA	NA|267aa|up_7|NZ_CP042468.1_2332619_2333420_+	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins	NA|357aa|up_6|NZ_CP042468.1_2333445_2334516_+	NA	NA|656aa|up_5|NZ_CP042468.1_2335277_2337245_-	cd16148, sulfatase_like, uncharacterized sulfatase subfamily	NA|581aa|up_4|NZ_CP042468.1_2337271_2339014_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|320aa|up_3|NZ_CP042468.1_2339250_2340210_+	NA	NA|655aa|up_2|NZ_CP042468.1_2340390_2342355_+	NA	NA|790aa|up_1|NZ_CP042468.1_2342420_2344790_+	cd10318, RGL11, Rhamnogalacturonan lyase of the polysaccharide lyase family 11	NA|70aa|up_0|NZ_CP042468.1_2345057_2345267_+	pfam00313, CSD, 'Cold-shock' DNA-binding domain	NA|395aa|down_0|NZ_CP042468.1_2348302_2349487_-	sd00001, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|272aa|down_1|NZ_CP042468.1_2349559_2350375_-	pfam02517, Abi, CAAX protease self-immunity	NA|1186aa|down_2|NZ_CP042468.1_2350889_2354447_+	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|796aa|down_3|NZ_CP042468.1_2354785_2357173_-	NA	NA|275aa|down_4|NZ_CP042468.1_2357680_2358505_-	NA	NA|850aa|down_5|NZ_CP042468.1_2358654_2361204_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|704aa|down_6|NZ_CP042468.1_2361378_2363490_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|949aa|down_7|NZ_CP042468.1_2363695_2366542_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|133aa|down_8|NZ_CP042468.1_2366724_2367123_+	NA	NA|510aa|down_9|NZ_CP042468.1_2367192_2368722_-	sd00006, TPR, Tetratricopeptide repeat
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	21	2407089-2407241	19	CRISPRCasFinder	no	cas3	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Unclear	TCAATTCAGCGTTTGGGGTTGCTGA	25	1	1	2407114-2407152	NZ_CP042468.1_739766-739728	NA	2	2	Unclear	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|359aa|up_9|NZ_CP042468.1_2391338_2392415_-,NA|224aa|up_2|NZ_CP042468.1_2401777_2402449_-,NA|144aa|down_2|NZ_CP042468.1_2409665_2410097_+,NA|271aa|down_5|NZ_CP042468.1_2412940_2413753_+,NA|259aa|down_6|NZ_CP042468.1_2413775_2414552_-	NA|359aa|up_9|NZ_CP042468.1_2391338_2392415_-	NA	NA|250aa|up_8|NZ_CP042468.1_2392587_2393337_-	cd12105, HmuY, Bacterial proteins similar to Porphyromonas gingivalis HmuY	NA|619aa|up_7|NZ_CP042468.1_2393759_2395616_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	cas3|540aa|up_6|NZ_CP042468.1_2395835_2397455_+	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional	NA|329aa|up_5|NZ_CP042468.1_2397839_2398826_+	PRK05442, PRK05442, malate dehydrogenase; Provisional	NA|375aa|up_4|NZ_CP042468.1_2399092_2400217_-	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]	NA|461aa|up_3|NZ_CP042468.1_2400398_2401781_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|224aa|up_2|NZ_CP042468.1_2401777_2402449_-	NA	NA|607aa|up_1|NZ_CP042468.1_2402595_2404416_-	PRK14290, PRK14290, chaperone protein DnaJ; Provisional	NA|389aa|up_0|NZ_CP042468.1_2404679_2405846_+	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]	NA|280aa|down_0|NZ_CP042468.1_2407309_2408149_-	pfam05013, FGase, N-formylglutamate amidohydrolase	NA|377aa|down_1|NZ_CP042468.1_2408323_2409454_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|144aa|down_2|NZ_CP042468.1_2409665_2410097_+	NA	NA|274aa|down_3|NZ_CP042468.1_2410492_2411314_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|395aa|down_4|NZ_CP042468.1_2411580_2412765_+	COG3825, COG3825, Uncharacterized protein conserved in bacteria [Function unknown]	NA|271aa|down_5|NZ_CP042468.1_2412940_2413753_+	NA	NA|259aa|down_6|NZ_CP042468.1_2413775_2414552_-	NA	NA|952aa|down_7|NZ_CP042468.1_2415417_2418273_-	NF012211, tand_rpt_95, tandem-95 repeat protein	NA|507aa|down_8|NZ_CP042468.1_2418422_2419943_-	cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase)	NA|637aa|down_9|NZ_CP042468.1_2420218_2422129_+	PRK13557, PRK13557, histidine kinase; Provisional
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	22	2487120-2487210	20	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	TTGTTGTTTGTCCGCGCAAATAGACCC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|177aa|up_5|NZ_CP042468.1_2476849_2477380_+,NA|922aa|up_3|NZ_CP042468.1_2478543_2481309_+,NA|148aa|down_8|NZ_CP042468.1_2498562_2499006_-	NA|771aa|up_9|NZ_CP042468.1_2470182_2472495_-	cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis	NA|286aa|up_8|NZ_CP042468.1_2472552_2473410_+	PLN02317, PLN02317, arogenate dehydratase	NA|368aa|up_7|NZ_CP042468.1_2473505_2474609_+	PRK08912, PRK08912, aminotransferase	NA|560aa|up_6|NZ_CP042468.1_2474608_2476288_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|177aa|up_5|NZ_CP042468.1_2476849_2477380_+	NA	NA|332aa|up_4|NZ_CP042468.1_2477376_2478372_+	pfam00665, rve, Integrase core domain	NA|922aa|up_3|NZ_CP042468.1_2478543_2481309_+	NA	NA|344aa|up_2|NZ_CP042468.1_2481440_2482472_+	cd07176, terB, tellurite resistance protein terB	NA|1156aa|up_1|NZ_CP042468.1_2482549_2486017_+	PRK12999, PRK12999, pyruvate carboxylase; Reviewed	NA|338aa|up_0|NZ_CP042468.1_2485976_2486990_+	COG1409, Icc, Predicted phosphohydrolases [General function prediction only]	NA|426aa|down_0|NZ_CP042468.1_2487214_2488492_-	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins	NA|399aa|down_1|NZ_CP042468.1_2488616_2489813_-	TIGR03472, HpnI, hopanoid biosynthesis associated glycosyl transferase protein HpnI	NA|648aa|down_2|NZ_CP042468.1_2489922_2491866_-	smart00191, Int_alpha, Integrin alpha (beta-propellor repeats)	NA|270aa|down_3|NZ_CP042468.1_2491892_2492702_-	sd00006, TPR, Tetratricopeptide repeat	NA|608aa|down_4|NZ_CP042468.1_2492873_2494697_-	pfam00135, COesterase, Carboxylesterase family	NA|167aa|down_5|NZ_CP042468.1_2494602_2495103_-	cd06971, PgpA, Phosphatidylglycerophosphatase A; a bacterial membrane-associated enzyme involved in lipid metabolism	NA|323aa|down_6|NZ_CP042468.1_2495095_2496064_-	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily	NA|811aa|down_7|NZ_CP042468.1_2496094_2498527_-	TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter like protein HpnN	NA|148aa|down_8|NZ_CP042468.1_2498562_2499006_-	NA	NA|284aa|down_9|NZ_CP042468.1_2499069_2499921_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	23	2609316-2609426	21	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	AAAGACCCCGGCGGGCTCGCCCCGCCCGGTGAACCAGCCTG	41	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|233aa|up_0|NZ_CP042468.1_2608563_2609262_+,NA|123aa|down_9|NZ_CP042468.1_2625526_2625895_-	NA|873aa|up_9|NZ_CP042468.1_2594722_2597341_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|257aa|up_8|NZ_CP042468.1_2597529_2598300_+	cd10970, CE4_DAC_u1_6s, Putative catalytic NodB homology domain of uncharacterized prokaryotic polysaccharide deacetylases which consist of a 6-stranded beta/alpha barrel	NA|406aa|up_7|NZ_CP042468.1_2598322_2599540_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|340aa|up_6|NZ_CP042468.1_2599678_2600698_-	sd00006, TPR, Tetratricopeptide repeat	NA|707aa|up_5|NZ_CP042468.1_2600838_2602959_-	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs	NA|386aa|up_4|NZ_CP042468.1_2602961_2604119_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|676aa|up_3|NZ_CP042468.1_2604431_2606459_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|117aa|up_2|NZ_CP042468.1_2607501_2607852_-	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|149aa|up_1|NZ_CP042468.1_2607873_2608320_-	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|233aa|up_0|NZ_CP042468.1_2608563_2609262_+	NA	NA|763aa|down_0|NZ_CP042468.1_2610281_2612570_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|957aa|down_1|NZ_CP042468.1_2613247_2616118_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|119aa|down_2|NZ_CP042468.1_2616142_2616499_+	pfam02152, FolB, Dihydroneopterin aldolase	NA|330aa|down_3|NZ_CP042468.1_2616583_2617573_+	cd06161, S2P-M50_SpoIVFB, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation	NA|451aa|down_4|NZ_CP042468.1_2617712_2619065_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|131aa|down_5|NZ_CP042468.1_2619067_2619460_-	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains	NA|417aa|down_6|NZ_CP042468.1_2619639_2620890_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|812aa|down_7|NZ_CP042468.1_2621025_2623461_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|688aa|down_8|NZ_CP042468.1_2623457_2625521_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|123aa|down_9|NZ_CP042468.1_2625526_2625895_-	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	24	2893931-2894055	22	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GCGACGAATGGCTCGGCCATCGCCGCCAACCAGACCGATAT	41	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|559aa|up_1|NZ_CP042468.1_2890513_2892190_-,NA|148aa|up_0|NZ_CP042468.1_2892423_2892867_+,NA|691aa|down_0|NZ_CP042468.1_2895875_2897948_-	NA|175aa|up_9|NZ_CP042468.1_2878708_2879233_+	cd02219, cupin_YjlB-like, Bacillus subtilis YjlB and related proteins, cupin domain	NA|438aa|up_8|NZ_CP042468.1_2879288_2880602_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|451aa|up_7|NZ_CP042468.1_2880662_2882015_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|455aa|up_6|NZ_CP042468.1_2882014_2883379_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|396aa|up_5|NZ_CP042468.1_2883883_2885071_+	pfam00339, Arrestin_N, Arrestin (or S-antigen), N-terminal domain	NA|414aa|up_4|NZ_CP042468.1_2885098_2886340_-	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|552aa|up_3|NZ_CP042468.1_2886493_2888149_+	pfam09721, Exosortase_EpsH, Transmembrane exosortase (Exosortase_EpsH)	NA|758aa|up_2|NZ_CP042468.1_2888171_2890445_+	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|559aa|up_1|NZ_CP042468.1_2890513_2892190_-	NA	NA|148aa|up_0|NZ_CP042468.1_2892423_2892867_+	NA	NA|691aa|down_0|NZ_CP042468.1_2895875_2897948_-	NA	NA|560aa|down_1|NZ_CP042468.1_2898143_2899823_-	pfam00221, Lyase_aromatic, Aromatic amino acid lyase	NA|517aa|down_2|NZ_CP042468.1_2899708_2901259_-	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13	NA|346aa|down_3|NZ_CP042468.1_2901448_2902486_+	TIGR02373, Photoactive_yellow_protein, photoactive yellow protein	NA|615aa|down_4|NZ_CP042468.1_2902554_2904399_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|97aa|down_5|NZ_CP042468.1_2904402_2904693_-	PRK13409, PRK13409, ribosome biogenesis/translation initiation ATPase RLI	NA|246aa|down_6|NZ_CP042468.1_2904874_2905612_+	pfam05996, Fe_bilin_red, Ferredoxin-dependent bilin reductase	NA|708aa|down_7|NZ_CP042468.1_2905675_2907799_-	pfam16683, TGase_elicitor, Transglutaminase elicitor	NA|384aa|down_8|NZ_CP042468.1_2908268_2909420_-	pfam13795, HupE_UreJ_2, HupE / UreJ protein	NA|92aa|down_9|NZ_CP042468.1_2909454_2909730_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	25	2956648-2956786	23	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GGACAACATGGTGTCTGACACCG	23	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|386aa|down_0|NZ_CP042468.1_2957112_2958270_+,NA|171aa|down_5|NZ_CP042468.1_2963263_2963776_-,NA|513aa|down_8|NZ_CP042468.1_2966430_2967969_-	NA|792aa|up_9|NZ_CP042468.1_2941533_2943909_-	TIGR03480, HpnN, hopanoid biosynthesis associated RND transporter like protein HpnN	NA|277aa|up_8|NZ_CP042468.1_2943943_2944774_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|422aa|up_7|NZ_CP042468.1_2944787_2946053_-	pfam07994, NAD_binding_5, Myo-inositol-1-phosphate synthase	NA|410aa|up_6|NZ_CP042468.1_2946420_2947650_-	pfam18845, baeRF_family3, Bacterial archaeo-eukaryotic release factor family 3	NA|914aa|up_5|NZ_CP042468.1_2947835_2950577_+	TIGR01577, Uncharacterized_glycosyl_hydrolase_MJ1610, oligosaccharide amylase	NA|308aa|up_4|NZ_CP042468.1_2950620_2951544_-	cd00683, Trans_IPPS_HH, Trans-Isoprenyl Diphosphate Synthases, head-to-head	NA|509aa|up_3|NZ_CP042468.1_2951540_2953067_-	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|240aa|up_2|NZ_CP042468.1_2953132_2953852_-	cd03513, CrtW_beta-carotene-ketolase, Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene	NA|411aa|up_1|NZ_CP042468.1_2953848_2955081_-	TIGR01790, Uncharacterized_carotenoid_cyclase_DR_0801, lycopene cyclase family protein	NA|324aa|up_0|NZ_CP042468.1_2955524_2956496_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|386aa|down_0|NZ_CP042468.1_2957112_2958270_+	NA	NA|388aa|down_1|NZ_CP042468.1_2958266_2959430_+	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB	NA|522aa|down_2|NZ_CP042468.1_2959426_2960992_+	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase	NA|232aa|down_3|NZ_CP042468.1_2960984_2961680_+	pfam08334, T2SSG, Type II secretion system (T2SS), protein G	NA|424aa|down_4|NZ_CP042468.1_2961804_2963076_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|171aa|down_5|NZ_CP042468.1_2963263_2963776_-	NA	NA|80aa|down_6|NZ_CP042468.1_2964238_2964478_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|596aa|down_7|NZ_CP042468.1_2964646_2966434_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|513aa|down_8|NZ_CP042468.1_2966430_2967969_-	NA	NA|695aa|down_9|NZ_CP042468.1_2968280_2970365_+	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	26	2984800-2984903	24	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GAGCCGCTCGAGCCCGAATTGCTCCCTCCCGAGTTCGA	38	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|146aa|up_8|NZ_CP042468.1_2974895_2975333_-,NA|415aa|up_7|NZ_CP042468.1_2975391_2976636_-,NA|172aa|up_3|NZ_CP042468.1_2980419_2980935_-,NA|230aa|up_2|NZ_CP042468.1_2981218_2981908_-,NA|127aa|up_1|NZ_CP042468.1_2982153_2982534_+,NA|206aa|down_0|NZ_CP042468.1_2987372_2987990_-,NA|419aa|down_5|NZ_CP042468.1_2993967_2995224_-,NA|166aa|down_8|NZ_CP042468.1_2998079_2998577_+	NA|622aa|up_9|NZ_CP042468.1_2972842_2974708_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|146aa|up_8|NZ_CP042468.1_2974895_2975333_-	NA	NA|415aa|up_7|NZ_CP042468.1_2975391_2976636_-	NA	NA|201aa|up_6|NZ_CP042468.1_2976778_2977381_-	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|368aa|up_5|NZ_CP042468.1_2977514_2978618_-	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|522aa|up_4|NZ_CP042468.1_2978857_2980423_-	pfam00732, GMC_oxred_N, GMC oxidoreductase	NA|172aa|up_3|NZ_CP042468.1_2980419_2980935_-	NA	NA|230aa|up_2|NZ_CP042468.1_2981218_2981908_-	NA	NA|127aa|up_1|NZ_CP042468.1_2982153_2982534_+	NA	NA|652aa|up_0|NZ_CP042468.1_2982555_2984511_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|206aa|down_0|NZ_CP042468.1_2987372_2987990_-	NA	NA|552aa|down_1|NZ_CP042468.1_2987986_2989642_-	cd07099, ALDH_DDALDH, Methylomonas sp	NA|132aa|down_2|NZ_CP042468.1_2989785_2990181_+	pfam01355, HIPIP, High potential iron-sulfur protein	NA|865aa|down_3|NZ_CP042468.1_2990331_2992926_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|215aa|down_4|NZ_CP042468.1_2993175_2993820_+	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|419aa|down_5|NZ_CP042468.1_2993967_2995224_-	NA	NA|144aa|down_6|NZ_CP042468.1_2995303_2995735_-	pfam04147, Nop14, Nop14-like family	NA|710aa|down_7|NZ_CP042468.1_2995728_2997858_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|166aa|down_8|NZ_CP042468.1_2998079_2998577_+	NA	NA|310aa|down_9|NZ_CP042468.1_2998581_2999511_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	27	3107207-3107309	25	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GGAGGCAGACCTTCCAGGTCTGGTC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|107aa|up_9|NZ_CP042468.1_3098202_3098523_+,NA|430aa|up_8|NZ_CP042468.1_3098515_3099805_+,NA|177aa|down_5|NZ_CP042468.1_3113884_3114415_-,NA|102aa|down_7|NZ_CP042468.1_3116182_3116488_-,NA|60aa|down_9|NZ_CP042468.1_3117792_3117972_-	NA|107aa|up_9|NZ_CP042468.1_3098202_3098523_+	NA	NA|430aa|up_8|NZ_CP042468.1_3098515_3099805_+	NA	NA|135aa|up_7|NZ_CP042468.1_3099985_3100390_+	PRK05680, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|141aa|up_6|NZ_CP042468.1_3100386_3100809_+	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|99aa|up_5|NZ_CP042468.1_3100886_3101183_+	pfam02049, FliE, Flagellar hook-basal body complex protein FliE	NA|560aa|up_4|NZ_CP042468.1_3101186_3102866_+	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|343aa|up_3|NZ_CP042468.1_3102880_3103909_+	PRK05686, fliG, flagellar motor switch protein G; Validated	NA|270aa|up_2|NZ_CP042468.1_3103895_3104705_+	PRK05687, fliH, flagellar assembly protein FliH	NA|470aa|up_1|NZ_CP042468.1_3104704_3106114_+	TIGR03496, FliI_clade1, flagellar protein export ATPase FliI	NA|241aa|up_0|NZ_CP042468.1_3106110_3106833_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|223aa|down_0|NZ_CP042468.1_3108633_3109302_+	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|416aa|down_1|NZ_CP042468.1_3109340_3110588_+	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|500aa|down_2|NZ_CP042468.1_3110606_3112106_+	COG3287, COG3287, Uncharacterized conserved protein [Function unknown]	NA|109aa|down_3|NZ_CP042468.1_3112560_3112887_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|332aa|down_4|NZ_CP042468.1_3112892_3113888_-	pfam00665, rve, Integrase core domain	NA|177aa|down_5|NZ_CP042468.1_3113884_3114415_-	NA	NA|398aa|down_6|NZ_CP042468.1_3114949_3116143_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|102aa|down_7|NZ_CP042468.1_3116182_3116488_-	NA	NA|413aa|down_8|NZ_CP042468.1_3116496_3117735_-	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|60aa|down_9|NZ_CP042468.1_3117792_3117972_-	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	28	3119136-3119218	26	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GATCCCCCAGCTACGCTTCGCTTCG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|177aa|up_5|NZ_CP042468.1_3113884_3114415_-,NA|102aa|up_3|NZ_CP042468.1_3116182_3116488_-,NA|60aa|up_1|NZ_CP042468.1_3117792_3117972_-,NA	NA|416aa|up_9|NZ_CP042468.1_3109340_3110588_+	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|500aa|up_8|NZ_CP042468.1_3110606_3112106_+	COG3287, COG3287, Uncharacterized conserved protein [Function unknown]	NA|109aa|up_7|NZ_CP042468.1_3112560_3112887_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|332aa|up_6|NZ_CP042468.1_3112892_3113888_-	pfam00665, rve, Integrase core domain	NA|177aa|up_5|NZ_CP042468.1_3113884_3114415_-	NA	NA|398aa|up_4|NZ_CP042468.1_3114949_3116143_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|102aa|up_3|NZ_CP042468.1_3116182_3116488_-	NA	NA|413aa|up_2|NZ_CP042468.1_3116496_3117735_-	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|60aa|up_1|NZ_CP042468.1_3117792_3117972_-	NA	NA|289aa|up_0|NZ_CP042468.1_3118252_3119119_-	TIGR02550, Flagellar_hook-associated_protein_3, flagellar hook-associated protein 3	NA|463aa|down_0|NZ_CP042468.1_3119264_3120653_-	PRK07739, flgK, flagellar hook-associated protein FlgK; Validated	NA|181aa|down_1|NZ_CP042468.1_3120652_3121195_-	pfam05130, FlgN, FlgN protein	NA|104aa|down_2|NZ_CP042468.1_3121332_3121644_-	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM	NA|120aa|down_3|NZ_CP042468.1_3121714_3122074_-	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ	NA|406aa|down_4|NZ_CP042468.1_3122083_3123301_-	pfam02119, FlgI, Flagellar P-ring protein	NA|257aa|down_5|NZ_CP042468.1_3123329_3124100_-	pfam02107, FlgH, Flagellar L-ring protein	NA|257aa|down_6|NZ_CP042468.1_3124099_3124870_-	TIGR03170, flgA_cterm, flagella basal body P-ring formation protein FlgA	NA|260aa|down_7|NZ_CP042468.1_3124881_3125661_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|243aa|down_8|NZ_CP042468.1_3125705_3126434_-	TIGR03506, FlgEFG_subfam, flagellar hook-basal body protein	NA|209aa|down_9|NZ_CP042468.1_3127064_3127691_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	29	3134273-3134347	27	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	TCGCTTCGCTACGGGTGGAGAGG	23	1	17	3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324|3134296-3134324	NZ_CP042468.1_1364264-1364292|NZ_CP042468.1_1434963-1434991|NZ_CP042468.1_2350578-2350606|NZ_CP042468.1_2397519-2397547|NZ_CP042468.1_3112221-3112249|NZ_CP042468.1_3114742-3114770|NZ_CP042468.1_3127908-3127936|NZ_CP042468.1_3128591-3128619|NZ_CP042468.1_3220776-3220804|NZ_CP042468.1_3646513-3646485|NZ_CP042468.1_3768378-3768406|NZ_CP042468.1_4022620-4022592|NZ_CP042468.1_2395749-2395777|NZ_CP042468.1_2504420-2504392|NZ_CP042468.1_2908023-2908051|NZ_CP042468.1_6616406-6616434|NZ_CP042468.1_6618100-6618128	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA	NA|406aa|up_9|NZ_CP042468.1_3122083_3123301_-	pfam02119, FlgI, Flagellar P-ring protein	NA|257aa|up_8|NZ_CP042468.1_3123329_3124100_-	pfam02107, FlgH, Flagellar L-ring protein	NA|257aa|up_7|NZ_CP042468.1_3124099_3124870_-	TIGR03170, flgA_cterm, flagella basal body P-ring formation protein FlgA	NA|260aa|up_6|NZ_CP042468.1_3124881_3125661_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|243aa|up_5|NZ_CP042468.1_3125705_3126434_-	TIGR03506, FlgEFG_subfam, flagellar hook-basal body protein	NA|209aa|up_4|NZ_CP042468.1_3127064_3127691_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|247aa|up_3|NZ_CP042468.1_3128833_3129574_-	TIGR02479, RNA_polymerase_sigma_factor_WhiG, RNA polymerase sigma factor, FliA/WhiG family	NA|444aa|up_2|NZ_CP042468.1_3129585_3130917_-	PRK05703, flhF, flagellar biosynthesis protein FlhF	NA|710aa|up_1|NZ_CP042468.1_3130964_3133094_-	pfam00771, FHIPEP, FHIPEP family	NA|354aa|up_0|NZ_CP042468.1_3133143_3134205_-	pfam01312, Bac_export_2, FlhB HrpN YscU SpaS Family	NA|262aa|down_0|NZ_CP042468.1_3134464_3135250_-	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|92aa|down_1|NZ_CP042468.1_3135246_3135522_-	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|269aa|down_2|NZ_CP042468.1_3135523_3136330_-	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|307aa|down_3|NZ_CP042468.1_3136356_3137277_-	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO	NA|108aa|down_4|NZ_CP042468.1_3137295_3137619_-	PRK08119, PRK08119, flagellar motor switch protein; Validated	NA|349aa|down_5|NZ_CP042468.1_3137701_3138748_-	TIGR01397, Flagellar_motor_switch_protein_FliM, flagellar motor switch protein FliM	NA|183aa|down_6|NZ_CP042468.1_3138761_3139310_-	pfam03748, FliL, Flagellar basal body-associated protein FliL	NA|260aa|down_7|NZ_CP042468.1_3139306_3140086_-	COG1360, MotB, Flagellar motor protein [Cell motility and secretion]	NA|228aa|down_8|NZ_CP042468.1_3140085_3140769_-	PRK06925, PRK06925, flagellar motor protein MotB	NA|254aa|down_9|NZ_CP042468.1_3140777_3141539_-	PRK08990, PRK08990, flagellar motor protein PomA; Reviewed
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	30	3372253-3372376	28	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	ATTGAAGGGCGGACGACCAGCTGCGTTTGCGCGAGGCGGTCGT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|166aa|up_4|NZ_CP042468.1_3366378_3366876_-,NA|390aa|down_2|NZ_CP042468.1_3374256_3375426_-,NA|189aa|down_3|NZ_CP042468.1_3375422_3375989_-,NA|420aa|down_8|NZ_CP042468.1_3381865_3383125_+	NA|472aa|up_9|NZ_CP042468.1_3362509_3363925_-	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|177aa|up_8|NZ_CP042468.1_3364078_3364609_+	pfam04752, ChaC, ChaC-like protein	NA|146aa|up_7|NZ_CP042468.1_3364605_3365043_-	pfam09537, DUF2383, Domain of unknown function (DUF2383)	NA|126aa|up_6|NZ_CP042468.1_3365131_3365509_-	pfam06127, DUF962, Protein of unknown function (DUF962)	NA|228aa|up_5|NZ_CP042468.1_3365719_3366403_+	PRK10119, PRK10119, putative hydrolase; Provisional	NA|166aa|up_4|NZ_CP042468.1_3366378_3366876_-	NA	NA|401aa|up_3|NZ_CP042468.1_3367031_3368234_+	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2	NA|360aa|up_2|NZ_CP042468.1_3368230_3369310_+	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins	NA|520aa|up_1|NZ_CP042468.1_3369699_3371259_+	pfam12034, DUF3520, Domain of unknown function (DUF3520)	NA|240aa|up_0|NZ_CP042468.1_3371468_3372188_-	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase	NA|292aa|down_0|NZ_CP042468.1_3372604_3373480_-	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]	NA|194aa|down_1|NZ_CP042468.1_3373706_3374288_+	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein	NA|390aa|down_2|NZ_CP042468.1_3374256_3375426_-	NA	NA|189aa|down_3|NZ_CP042468.1_3375422_3375989_-	NA	NA|164aa|down_4|NZ_CP042468.1_3376186_3376678_-	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains	NA|678aa|down_5|NZ_CP042468.1_3376973_3379007_+	TIGR03420, DnaA_homol_Hda, DnaA regulatory inactivator Hda	NA|297aa|down_6|NZ_CP042468.1_3379014_3379905_-	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR	NA|592aa|down_7|NZ_CP042468.1_3380028_3381804_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|420aa|down_8|NZ_CP042468.1_3381865_3383125_+	NA	NA|369aa|down_9|NZ_CP042468.1_3383171_3384278_+	cd14658, Imelysin-like_IrpA, Imelysin-like domain in iron-regulated protein A
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	31	3478106-3478366	2	PILER-CR	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	AGGCGACCACCCGCCCCGAAGACCCCGGCGGGCTCGTCCCGCCGGTGAATCAGCCTGTG	59	0	0	NA	NA	NA	3	3	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|148aa|up_9|NZ_CP042468.1_3464341_3464785_-,NA|206aa|up_5|NZ_CP042468.1_3469023_3469641_+,NA|472aa|up_4|NZ_CP042468.1_3469752_3471168_+,NA|174aa|up_3|NZ_CP042468.1_3471170_3471692_+,NA|217aa|down_4|NZ_CP042468.1_3489458_3490109_+,NA|297aa|down_5|NZ_CP042468.1_3490413_3491304_-,NA|266aa|down_6|NZ_CP042468.1_3491405_3492203_-,NA|278aa|down_7|NZ_CP042468.1_3492378_3493212_-	NA|148aa|up_9|NZ_CP042468.1_3464341_3464785_-	NA	NA|820aa|up_8|NZ_CP042468.1_3465241_3467701_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|212aa|up_7|NZ_CP042468.1_3467795_3468431_+	TIGR03901, hypothetical_protein, MYXO-CTERM domain	NA|185aa|up_6|NZ_CP042468.1_3468494_3469049_+	COG3981, COG3981, Predicted acetyltransferase [General function prediction only]	NA|206aa|up_5|NZ_CP042468.1_3469023_3469641_+	NA	NA|472aa|up_4|NZ_CP042468.1_3469752_3471168_+	NA	NA|174aa|up_3|NZ_CP042468.1_3471170_3471692_+	NA	NA|485aa|up_2|NZ_CP042468.1_3471775_3473230_+	pfam03055, RPE65, Retinal pigment epithelial membrane protein	NA|712aa|up_1|NZ_CP042468.1_3473226_3475362_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|787aa|up_0|NZ_CP042468.1_3475556_3477917_+	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|266aa|down_0|NZ_CP042468.1_3479463_3480261_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|1243aa|down_1|NZ_CP042468.1_3480377_3484106_+	pfam12969, DUF3857, Domain of Unknown Function with PDB structure (DUF3857)	NA|1280aa|down_2|NZ_CP042468.1_3484102_3487942_+	pfam12970, DUF3858, Domain of Unknown Function with PDB structure (DUF3858)	NA|407aa|down_3|NZ_CP042468.1_3488055_3489276_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|217aa|down_4|NZ_CP042468.1_3489458_3490109_+	NA	NA|297aa|down_5|NZ_CP042468.1_3490413_3491304_-	NA	NA|266aa|down_6|NZ_CP042468.1_3491405_3492203_-	NA	NA|278aa|down_7|NZ_CP042468.1_3492378_3493212_-	NA	NA|530aa|down_8|NZ_CP042468.1_3493339_3494929_-	pfam14344, DUF4397, Domain of unknown function (DUF4397)	NA|308aa|down_9|NZ_CP042468.1_3495287_3496211_+	TIGR02651, Ribonuclease_Z, ribonuclease Z
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	32	3479068-3479213	2	CRT	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CTGGCGAAACCGGAAAGGCCATT	23	0	0	NA	NA	NA	3	3	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|148aa|up_9|NZ_CP042468.1_3464341_3464785_-,NA|206aa|up_5|NZ_CP042468.1_3469023_3469641_+,NA|472aa|up_4|NZ_CP042468.1_3469752_3471168_+,NA|174aa|up_3|NZ_CP042468.1_3471170_3471692_+,NA|217aa|down_4|NZ_CP042468.1_3489458_3490109_+,NA|297aa|down_5|NZ_CP042468.1_3490413_3491304_-,NA|266aa|down_6|NZ_CP042468.1_3491405_3492203_-,NA|278aa|down_7|NZ_CP042468.1_3492378_3493212_-	NA|148aa|up_9|NZ_CP042468.1_3464341_3464785_-	NA	NA|820aa|up_8|NZ_CP042468.1_3465241_3467701_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|212aa|up_7|NZ_CP042468.1_3467795_3468431_+	TIGR03901, hypothetical_protein, MYXO-CTERM domain	NA|185aa|up_6|NZ_CP042468.1_3468494_3469049_+	COG3981, COG3981, Predicted acetyltransferase [General function prediction only]	NA|206aa|up_5|NZ_CP042468.1_3469023_3469641_+	NA	NA|472aa|up_4|NZ_CP042468.1_3469752_3471168_+	NA	NA|174aa|up_3|NZ_CP042468.1_3471170_3471692_+	NA	NA|485aa|up_2|NZ_CP042468.1_3471775_3473230_+	pfam03055, RPE65, Retinal pigment epithelial membrane protein	NA|712aa|up_1|NZ_CP042468.1_3473226_3475362_-	PRK13557, PRK13557, histidine kinase; Provisional	NA|787aa|up_0|NZ_CP042468.1_3475556_3477917_+	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|266aa|down_0|NZ_CP042468.1_3479463_3480261_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|1243aa|down_1|NZ_CP042468.1_3480377_3484106_+	pfam12969, DUF3857, Domain of Unknown Function with PDB structure (DUF3857)	NA|1280aa|down_2|NZ_CP042468.1_3484102_3487942_+	pfam12970, DUF3858, Domain of Unknown Function with PDB structure (DUF3858)	NA|407aa|down_3|NZ_CP042468.1_3488055_3489276_-	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|217aa|down_4|NZ_CP042468.1_3489458_3490109_+	NA	NA|297aa|down_5|NZ_CP042468.1_3490413_3491304_-	NA	NA|266aa|down_6|NZ_CP042468.1_3491405_3492203_-	NA	NA|278aa|down_7|NZ_CP042468.1_3492378_3493212_-	NA	NA|530aa|down_8|NZ_CP042468.1_3493339_3494929_-	pfam14344, DUF4397, Domain of unknown function (DUF4397)	NA|308aa|down_9|NZ_CP042468.1_3495287_3496211_+	TIGR02651, Ribonuclease_Z, ribonuclease Z
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	33	3650572-3650839	3	CRT	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GCGCGTCGGTCGCTCCGA	18	0	0	NA	NA	NA	6	6	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|575aa|up_9|NZ_CP042468.1_3637890_3639615_+,NA|155aa|up_2|NZ_CP042468.1_3647964_3648429_-,NA|428aa|up_0|NZ_CP042468.1_3649196_3650480_-,NA|400aa|down_0|NZ_CP042468.1_3650865_3652065_-,NA|428aa|down_1|NZ_CP042468.1_3652302_3653586_-,NA|509aa|down_8|NZ_CP042468.1_3662409_3663936_-	NA|575aa|up_9|NZ_CP042468.1_3637890_3639615_+	NA	NA|693aa|up_8|NZ_CP042468.1_3640043_3642122_+	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|336aa|up_7|NZ_CP042468.1_3642287_3643295_+	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|406aa|up_6|NZ_CP042468.1_3643535_3644753_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|255aa|up_5|NZ_CP042468.1_3644782_3645547_+	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|247aa|up_4|NZ_CP042468.1_3645671_3646412_+	pfam14025, DUF4241, Protein of unknown function (DUF4241)	NA|380aa|up_3|NZ_CP042468.1_3646582_3647722_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|155aa|up_2|NZ_CP042468.1_3647964_3648429_-	NA	NA|175aa|up_1|NZ_CP042468.1_3648623_3649148_-	TIGR02722, Penicillin-binding_protein_activator_LpoB, uncharacterized proteobacterial lipoprotein	NA|428aa|up_0|NZ_CP042468.1_3649196_3650480_-	NA	NA|400aa|down_0|NZ_CP042468.1_3650865_3652065_-	NA	NA|428aa|down_1|NZ_CP042468.1_3652302_3653586_-	NA	NA|140aa|down_2|NZ_CP042468.1_3653893_3654313_+	pfam05635, 23S_rRNA_IVP, 23S rRNA-intervening sequence protein	NA|658aa|down_3|NZ_CP042468.1_3654759_3656733_-	PRK07229, PRK07229, aconitate hydratase; Validated	NA|253aa|down_4|NZ_CP042468.1_3656913_3657672_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|768aa|down_5|NZ_CP042468.1_3657870_3660174_-	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|250aa|down_6|NZ_CP042468.1_3660413_3661163_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|308aa|down_7|NZ_CP042468.1_3661378_3662302_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|509aa|down_8|NZ_CP042468.1_3662409_3663936_-	NA	NA|370aa|down_9|NZ_CP042468.1_3664018_3665128_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	34	3823503-3823724	29	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGACGACGCCGACTGCCCCACCGG	24	0	0	NA	NA	NA	3	3	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|71aa|up_1|NZ_CP042468.1_3819776_3819989_-,NA|956aa|down_6|NZ_CP042468.1_3830748_3833616_-,NA|433aa|down_8|NZ_CP042468.1_3835059_3836358_+	NA|323aa|up_9|NZ_CP042468.1_3810014_3810983_+	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|385aa|up_8|NZ_CP042468.1_3811272_3812427_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|370aa|up_7|NZ_CP042468.1_3812735_3813845_+	pfam02405, MlaE, Permease MlaE	NA|273aa|up_6|NZ_CP042468.1_3813855_3814674_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|341aa|up_5|NZ_CP042468.1_3814689_3815712_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|217aa|up_4|NZ_CP042468.1_3815708_3816359_+	pfam03886, ABC_trans_aux, ABC-type transport auxiliary lipoprotein component	NA|841aa|up_3|NZ_CP042468.1_3816377_3818900_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|284aa|up_2|NZ_CP042468.1_3818888_3819740_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|71aa|up_1|NZ_CP042468.1_3819776_3819989_-	NA	NA|254aa|up_0|NZ_CP042468.1_3820121_3820883_+	pfam10615, DUF2470, Protein of unknown function (DUF2470)	NA|213aa|down_0|NZ_CP042468.1_3824500_3825139_+	TIGR04349, Radical_SAM_domain_protein, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, gammaproteobacterial type	NA|97aa|down_1|NZ_CP042468.1_3825238_3825529_-	cd13836, IHF_B, Beta subunit of integration host factor (IHFB)	NA|424aa|down_2|NZ_CP042468.1_3825686_3826958_-	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|81aa|down_3|NZ_CP042468.1_3827303_3827546_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|650aa|down_4|NZ_CP042468.1_3827721_3829671_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|346aa|down_5|NZ_CP042468.1_3829677_3830715_+	sd00006, TPR, Tetratricopeptide repeat	NA|956aa|down_6|NZ_CP042468.1_3830748_3833616_-	NA	NA|449aa|down_7|NZ_CP042468.1_3833627_3834974_-	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|433aa|down_8|NZ_CP042468.1_3835059_3836358_+	NA	NA|553aa|down_9|NZ_CP042468.1_3836394_3838053_+	PRK05414, PRK05414, urocanate hydratase; Provisional
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	35	4266588-4266701	3	PILER-CR	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CCCTCAGCACGAACGACCGCGGTCGTTC	28	1	1	4266616-4266641	NZ_CP042468.1_4206719-4206744	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|40aa|up_9|NZ_CP042468.1_4257163_4257283_-,NA|85aa|up_7|NZ_CP042468.1_4257784_4258039_+,NA|118aa|up_6|NZ_CP042468.1_4258143_4258497_+,NA|121aa|up_5|NZ_CP042468.1_4258719_4259082_+,NA|177aa|up_3|NZ_CP042468.1_4260054_4260585_-,NA|289aa|down_0|NZ_CP042468.1_4266968_4267835_-,NA|67aa|down_2|NZ_CP042468.1_4269996_4270197_+,NA|320aa|down_3|NZ_CP042468.1_4270378_4271338_+,NA|78aa|down_4|NZ_CP042468.1_4271349_4271583_+	NA|40aa|up_9|NZ_CP042468.1_4257163_4257283_-	NA	NA|122aa|up_8|NZ_CP042468.1_4257242_4257608_-	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component	NA|85aa|up_7|NZ_CP042468.1_4257784_4258039_+	NA	NA|118aa|up_6|NZ_CP042468.1_4258143_4258497_+	NA	NA|121aa|up_5|NZ_CP042468.1_4258719_4259082_+	NA	NA|332aa|up_4|NZ_CP042468.1_4259062_4260058_-	pfam00665, rve, Integrase core domain	NA|177aa|up_3|NZ_CP042468.1_4260054_4260585_-	NA	NA|307aa|up_2|NZ_CP042468.1_4261007_4261928_+	pfam08878, DUF1837, Domain of unknown function (DUF1837)	NA|854aa|up_1|NZ_CP042468.1_4261929_4264491_+	COG1204, COG1204, Superfamily II helicase [General function prediction only]	NA|456aa|up_0|NZ_CP042468.1_4264577_4265945_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|289aa|down_0|NZ_CP042468.1_4266968_4267835_-	NA	NA|569aa|down_1|NZ_CP042468.1_4268135_4269842_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|67aa|down_2|NZ_CP042468.1_4269996_4270197_+	NA	NA|320aa|down_3|NZ_CP042468.1_4270378_4271338_+	NA	NA|78aa|down_4|NZ_CP042468.1_4271349_4271583_+	NA	NA|121aa|down_5|NZ_CP042468.1_4272015_4272378_-	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|848aa|down_6|NZ_CP042468.1_4272574_4275118_+	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|145aa|down_7|NZ_CP042468.1_4275151_4275586_+	pfam14568, SUKH_6, SMI1-KNR4 cell-wall	NA|487aa|down_8|NZ_CP042468.1_4275710_4277171_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|162aa|down_9|NZ_CP042468.1_4277618_4278104_-	pfam14493, HTH_40, Helix-turn-helix domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	36	5062098-5062173	30	CRISPRCasFinder	no	DinG,DEDDh	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Unclear	GCGCCCCATCCGCCTCGCGCTGTA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|110aa|up_8|NZ_CP042468.1_5045062_5045392_-,NA|242aa|up_7|NZ_CP042468.1_5046200_5046926_+,NA|105aa|up_5|NZ_CP042468.1_5051655_5051970_+,NA|280aa|up_0|NZ_CP042468.1_5061220_5062060_-,NA|72aa|down_0|NZ_CP042468.1_5062428_5062644_+,NA|215aa|down_1|NZ_CP042468.1_5062655_5063300_+,NA|149aa|down_6|NZ_CP042468.1_5068274_5068721_+,NA|141aa|down_9|NZ_CP042468.1_5071454_5071877_+	NA|1128aa|up_9|NZ_CP042468.1_5041671_5045055_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|110aa|up_8|NZ_CP042468.1_5045062_5045392_-	NA	NA|242aa|up_7|NZ_CP042468.1_5046200_5046926_+	NA	NA|1165aa|up_6|NZ_CP042468.1_5047770_5051265_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|105aa|up_5|NZ_CP042468.1_5051655_5051970_+	NA	NA|1196aa|up_4|NZ_CP042468.1_5051985_5055573_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|324aa|up_3|NZ_CP042468.1_5055743_5056715_+	cd14949, Asparaginase_2_like_3, Uncharacterized bacterial subfamily of the L-Asparaginase type 2-like enzymes, an Ntn-hydrolase family	NA|1188aa|up_2|NZ_CP042468.1_5056728_5060292_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|263aa|up_1|NZ_CP042468.1_5060324_5061113_-	pfam14080, DUF4261, Domain of unknown function (DUF4261)	NA|280aa|up_0|NZ_CP042468.1_5061220_5062060_-	NA	NA|72aa|down_0|NZ_CP042468.1_5062428_5062644_+	NA	NA|215aa|down_1|NZ_CP042468.1_5062655_5063300_+	NA	DinG|628aa|down_2|NZ_CP042468.1_5063398_5065282_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|211aa|down_3|NZ_CP042468.1_5065382_5066015_-	pfam03203, MerC, MerC mercury resistance protein	NA|433aa|down_4|NZ_CP042468.1_5066011_5067310_-	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1	DEDDh|304aa|down_5|NZ_CP042468.1_5067355_5068267_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|149aa|down_6|NZ_CP042468.1_5068274_5068721_+	NA	NA|498aa|down_7|NZ_CP042468.1_5068734_5070228_-	cd03877, M28_like, M28 Zn-peptidase, many containing a protease-associated (PA) domain insert	NA|329aa|down_8|NZ_CP042468.1_5070336_5071323_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|141aa|down_9|NZ_CP042468.1_5071454_5071877_+	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	37	5096929-5097114	31	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CCTCGGTCCTCTCCTTCCCTTCGCTTCGCTACGGGTGGAGAGG	43	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|274aa|up_4|NZ_CP042468.1_5087590_5088412_-,NA|431aa|up_3|NZ_CP042468.1_5089955_5091248_+,NA|62aa|down_9|NZ_CP042468.1_5116638_5116824_+	NA|942aa|up_9|NZ_CP042468.1_5078978_5081804_-	COG5617, COG5617, Predicted integral membrane protein [Function unknown]	NA|220aa|up_8|NZ_CP042468.1_5081844_5082504_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|334aa|up_7|NZ_CP042468.1_5082521_5083523_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|337aa|up_6|NZ_CP042468.1_5083728_5084739_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|806aa|up_5|NZ_CP042468.1_5084735_5087153_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|274aa|up_4|NZ_CP042468.1_5087590_5088412_-	NA	NA|431aa|up_3|NZ_CP042468.1_5089955_5091248_+	NA	NA|708aa|up_2|NZ_CP042468.1_5091849_5093973_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|818aa|up_1|NZ_CP042468.1_5093950_5096404_+	cd16148, sulfatase_like, uncharacterized sulfatase subfamily	NA|136aa|up_0|NZ_CP042468.1_5096461_5096869_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|499aa|down_0|NZ_CP042468.1_5097351_5098848_-	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional	NA|379aa|down_1|NZ_CP042468.1_5099173_5100310_+	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|797aa|down_2|NZ_CP042468.1_5100751_5103142_+	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins	NA|575aa|down_3|NZ_CP042468.1_5103138_5104863_-	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX	NA|337aa|down_4|NZ_CP042468.1_5105200_5106211_+	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger	NA|780aa|down_5|NZ_CP042468.1_5106299_5108639_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1241aa|down_6|NZ_CP042468.1_5108712_5112435_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|464aa|down_7|NZ_CP042468.1_5112431_5113823_+	sd00006, TPR, Tetratricopeptide repeat	NA|813aa|down_8|NZ_CP042468.1_5113816_5116255_-	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|62aa|down_9|NZ_CP042468.1_5116638_5116824_+	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	38	5100576-5100727	32	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CCCGAGAAGGTGAAATGTGCGTCCCCCAAATTGTTGTTTGTCTGCTTCAATAGTC	55	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|274aa|up_6|NZ_CP042468.1_5087590_5088412_-,NA|431aa|up_5|NZ_CP042468.1_5089955_5091248_+,NA|62aa|down_7|NZ_CP042468.1_5116638_5116824_+	NA|334aa|up_9|NZ_CP042468.1_5082521_5083523_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|337aa|up_8|NZ_CP042468.1_5083728_5084739_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|806aa|up_7|NZ_CP042468.1_5084735_5087153_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|274aa|up_6|NZ_CP042468.1_5087590_5088412_-	NA	NA|431aa|up_5|NZ_CP042468.1_5089955_5091248_+	NA	NA|708aa|up_4|NZ_CP042468.1_5091849_5093973_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|818aa|up_3|NZ_CP042468.1_5093950_5096404_+	cd16148, sulfatase_like, uncharacterized sulfatase subfamily	NA|136aa|up_2|NZ_CP042468.1_5096461_5096869_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|499aa|up_1|NZ_CP042468.1_5097351_5098848_-	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional	NA|379aa|up_0|NZ_CP042468.1_5099173_5100310_+	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|797aa|down_0|NZ_CP042468.1_5100751_5103142_+	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins	NA|575aa|down_1|NZ_CP042468.1_5103138_5104863_-	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX	NA|337aa|down_2|NZ_CP042468.1_5105200_5106211_+	TIGR00927, retinal_rod, K+-dependent Na+/Ca+ exchanger	NA|780aa|down_3|NZ_CP042468.1_5106299_5108639_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|1241aa|down_4|NZ_CP042468.1_5108712_5112435_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|464aa|down_5|NZ_CP042468.1_5112431_5113823_+	sd00006, TPR, Tetratricopeptide repeat	NA|813aa|down_6|NZ_CP042468.1_5113816_5116255_-	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|62aa|down_7|NZ_CP042468.1_5116638_5116824_+	NA	NA|217aa|down_8|NZ_CP042468.1_5117048_5117699_+	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family	NA|223aa|down_9|NZ_CP042468.1_5117835_5118504_+	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	39	5220231-5220345	33	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CCCGAAGACCCCGGCGGGGTTATCCCGCCCGGTGAATAAGCCTG	44	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|232aa|up_6|NZ_CP042468.1_5211371_5212067_-,NA|201aa|up_5|NZ_CP042468.1_5212183_5212786_-,NA|262aa|up_4|NZ_CP042468.1_5212800_5213586_-,NA|343aa|up_2|NZ_CP042468.1_5215024_5216053_+,NA|333aa|down_1|NZ_CP042468.1_5223116_5224115_+,NA|341aa|down_2|NZ_CP042468.1_5224137_5225160_+,NA|1307aa|down_4|NZ_CP042468.1_5227455_5231376_+,NA|1168aa|down_5|NZ_CP042468.1_5231372_5234876_+,NA|1161aa|down_6|NZ_CP042468.1_5234872_5238355_+,NA|315aa|down_7|NZ_CP042468.1_5238344_5239289_-,NA|285aa|down_9|NZ_CP042468.1_5240145_5241000_+	NA|483aa|up_9|NZ_CP042468.1_5206244_5207693_-	pfam07394, DUF1501, Protein of unknown function (DUF1501)	NA|596aa|up_8|NZ_CP042468.1_5207745_5209533_-	pfam07583, PSCyt2, Protein of unknown function (DUF1549)	NA|518aa|up_7|NZ_CP042468.1_5209795_5211349_+	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions	NA|232aa|up_6|NZ_CP042468.1_5211371_5212067_-	NA	NA|201aa|up_5|NZ_CP042468.1_5212183_5212786_-	NA	NA|262aa|up_4|NZ_CP042468.1_5212800_5213586_-	NA	NA|372aa|up_3|NZ_CP042468.1_5213820_5214936_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|343aa|up_2|NZ_CP042468.1_5215024_5216053_+	NA	NA|383aa|up_1|NZ_CP042468.1_5216507_5217656_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|757aa|up_0|NZ_CP042468.1_5217748_5220019_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|559aa|down_0|NZ_CP042468.1_5221279_5222956_+	PRK04195, PRK04195, replication factor C large subunit; Provisional	NA|333aa|down_1|NZ_CP042468.1_5223116_5224115_+	NA	NA|341aa|down_2|NZ_CP042468.1_5224137_5225160_+	NA	NA|579aa|down_3|NZ_CP042468.1_5225656_5227393_+	smart00387, HATPase_c, Histidine kinase-like ATPases	NA|1307aa|down_4|NZ_CP042468.1_5227455_5231376_+	NA	NA|1168aa|down_5|NZ_CP042468.1_5231372_5234876_+	NA	NA|1161aa|down_6|NZ_CP042468.1_5234872_5238355_+	NA	NA|315aa|down_7|NZ_CP042468.1_5238344_5239289_-	NA	NA|258aa|down_8|NZ_CP042468.1_5239299_5240073_-	sd00006, TPR, Tetratricopeptide repeat	NA|285aa|down_9|NZ_CP042468.1_5240145_5241000_+	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	40	5462318-5462404	34	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GACCAGCGCTGGAAGCGCTGCCTCCAAA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|249aa|up_8|NZ_CP042468.1_5453045_5453792_+,NA|154aa|up_3|NZ_CP042468.1_5459564_5460026_+,NA|151aa|up_0|NZ_CP042468.1_5461834_5462287_-,NA|368aa|down_0|NZ_CP042468.1_5462482_5463586_-,NA|149aa|down_4|NZ_CP042468.1_5467623_5468070_-,NA|327aa|down_8|NZ_CP042468.1_5475062_5476043_-,NA|341aa|down_9|NZ_CP042468.1_5476074_5477097_-	NA|378aa|up_9|NZ_CP042468.1_5451601_5452735_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|249aa|up_8|NZ_CP042468.1_5453045_5453792_+	NA	NA|565aa|up_7|NZ_CP042468.1_5453856_5455551_-	cd07412, MPP_YhcR_N, Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain	NA|326aa|up_6|NZ_CP042468.1_5455636_5456614_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|616aa|up_5|NZ_CP042468.1_5456625_5458473_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|339aa|up_4|NZ_CP042468.1_5458457_5459474_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|154aa|up_3|NZ_CP042468.1_5459564_5460026_+	NA	NA|289aa|up_2|NZ_CP042468.1_5460078_5460945_-	sd00006, TPR, Tetratricopeptide repeat	NA|260aa|up_1|NZ_CP042468.1_5461027_5461807_-	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO	NA|151aa|up_0|NZ_CP042468.1_5461834_5462287_-	NA	NA|368aa|down_0|NZ_CP042468.1_5462482_5463586_-	NA	NA|292aa|down_1|NZ_CP042468.1_5463610_5464486_-	sd00006, TPR, Tetratricopeptide repeat	NA|607aa|down_2|NZ_CP042468.1_5464586_5466407_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|333aa|down_3|NZ_CP042468.1_5466606_5467605_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|149aa|down_4|NZ_CP042468.1_5467623_5468070_-	NA	NA|884aa|down_5|NZ_CP042468.1_5468078_5470730_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|489aa|down_6|NZ_CP042468.1_5470970_5472437_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|749aa|down_7|NZ_CP042468.1_5472733_5474980_-	COG4581, COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair]	NA|327aa|down_8|NZ_CP042468.1_5475062_5476043_-	NA	NA|341aa|down_9|NZ_CP042468.1_5476074_5477097_-	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	41	5489761-5489880	35	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	AATAAGCCCACGCGGAGCGGCTGCTTGCTGCCCGCGGAGCGCA	43	1	1	5489804-5489837	NZ_CP042468.1_5303350-5303317	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|327aa|up_8|NZ_CP042468.1_5475062_5476043_-,NA|341aa|up_7|NZ_CP042468.1_5476074_5477097_-,NA	NA|749aa|up_9|NZ_CP042468.1_5472733_5474980_-	COG4581, COG4581, Superfamily II RNA helicase [DNA replication, recombination, and repair]	NA|327aa|up_8|NZ_CP042468.1_5475062_5476043_-	NA	NA|341aa|up_7|NZ_CP042468.1_5476074_5477097_-	NA	NA|544aa|up_6|NZ_CP042468.1_5477093_5478725_-	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like	NA|338aa|up_5|NZ_CP042468.1_5478736_5479750_-	pfam07811, TadE, TadE-like protein	NA|734aa|up_4|NZ_CP042468.1_5479782_5481984_-	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|272aa|up_3|NZ_CP042468.1_5482266_5483082_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|692aa|up_2|NZ_CP042468.1_5483588_5485664_+	pfam00932, LTD, Lamin Tail Domain	NA|192aa|up_1|NZ_CP042468.1_5485696_5486272_+	TIGR04272, hypothetical_protein, CxxC-x17-CxxC domain	NA|447aa|up_0|NZ_CP042468.1_5486297_5487638_+	COG3174, COG3174, Predicted membrane protein [Function unknown]	NA|311aa|down_0|NZ_CP042468.1_5489976_5490909_+	pfam02517, Abi, CAAX protease self-immunity	NA|171aa|down_1|NZ_CP042468.1_5490905_5491418_-	pfam03918, CcmH, Cytochrome C biogenesis protein	NA|606aa|down_2|NZ_CP042468.1_5491427_5493245_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|667aa|down_3|NZ_CP042468.1_5493477_5495478_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|394aa|down_4|NZ_CP042468.1_5495543_5496725_+	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs	NA|1041aa|down_5|NZ_CP042468.1_5496876_5499999_+	pfam01833, TIG, IPT/TIG domain	NA|1037aa|down_6|NZ_CP042468.1_5500072_5503183_+	pfam01833, TIG, IPT/TIG domain	NA|174aa|down_7|NZ_CP042468.1_5503391_5503913_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|158aa|down_8|NZ_CP042468.1_5503783_5504257_-	TIGR02266, gmx_TIGR02266, Myxococcus xanthus paralogous domain TIGR02266	NA|736aa|down_9|NZ_CP042468.1_5504628_5506836_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	42	5657624-5657731	36	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GCGCGCGAATTGTTCGGTGCGTGGGCATCTTGCCCTCGT	39	1	14	5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692|5657663-5657692	NZ_CP042468.1_5088733-5088762|NZ_CP042468.1_5089833-5089862|NZ_CP042468.1_6075885-6075914|NZ_CP042468.1_6075954-6075983|NZ_CP042468.1_6076092-6076121|NZ_CP042468.1_6076161-6076190|NZ_CP042468.1_6537539-6537568|NZ_CP042468.1_6537663-6537692|NZ_CP042468.1_209115-209086|NZ_CP042468.1_209184-209155|NZ_CP042468.1_220366-220337|NZ_CP042468.1_220650-220621|NZ_CP042468.1_220712-220683|NZ_CP042468.1_462679-462650	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|112aa|up_1|NZ_CP042468.1_5655917_5656253_-,NA|216aa|up_0|NZ_CP042468.1_5656273_5656921_+,NA	NA|210aa|up_9|NZ_CP042468.1_5640910_5641540_-	cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity	NA|230aa|up_8|NZ_CP042468.1_5641778_5642468_-	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown]	NA|239aa|up_7|NZ_CP042468.1_5642479_5643196_-	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|278aa|up_6|NZ_CP042468.1_5643821_5644655_-	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|2041aa|up_5|NZ_CP042468.1_5644748_5650871_-	sd00038, Kelch, Kelch repeat	NA|125aa|up_4|NZ_CP042468.1_5651210_5651585_+	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains	NA|993aa|up_3|NZ_CP042468.1_5651597_5654576_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|up_2|NZ_CP042468.1_5654602_5655280_+	smart00867, YceI, YceI-like domain	NA|112aa|up_1|NZ_CP042468.1_5655917_5656253_-	NA	NA|216aa|up_0|NZ_CP042468.1_5656273_5656921_+	NA	NA|411aa|down_0|NZ_CP042468.1_5658137_5659370_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|223aa|down_1|NZ_CP042468.1_5659424_5660093_+	pfam08856, DUF1826, Protein of unknown function (DUF1826)	NA|124aa|down_2|NZ_CP042468.1_5660458_5660830_-	pfam07683, CobW_C, Cobalamin synthesis protein cobW C-terminal domain	NA|139aa|down_3|NZ_CP042468.1_5661224_5661641_-	pfam03203, MerC, MerC mercury resistance protein	NA|124aa|down_4|NZ_CP042468.1_5661839_5662211_-	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators	NA|247aa|down_5|NZ_CP042468.1_5662293_5663034_-	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]	NA|639aa|down_6|NZ_CP042468.1_5663054_5664971_-	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|328aa|down_7|NZ_CP042468.1_5664984_5665968_-	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic	NA|327aa|down_8|NZ_CP042468.1_5666474_5667455_+	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|178aa|down_9|NZ_CP042468.1_5667652_5668186_-	pfam10698, DUF2505, Protein of unknown function (DUF2505)
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	43	6036981-6037089	37	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	AAGAGACCATCTTCGACCCCGAGAA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|615aa|up_7|NZ_CP042468.1_6026827_6028672_-,NA|155aa|down_8|NZ_CP042468.1_6051607_6052072_-,NA|141aa|down_9|NZ_CP042468.1_6052499_6052922_+	NA|565aa|up_9|NZ_CP042468.1_6023546_6025241_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|444aa|up_8|NZ_CP042468.1_6025365_6026697_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|615aa|up_7|NZ_CP042468.1_6026827_6028672_-	NA	NA|464aa|up_6|NZ_CP042468.1_6028836_6030228_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|172aa|up_5|NZ_CP042468.1_6031192_6031708_+	pfam02956, TT_ORF1, TT viral orf 1	NA|121aa|up_4|NZ_CP042468.1_6031747_6032110_-	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|644aa|up_3|NZ_CP042468.1_6032252_6034184_+	PRK08645, PRK08645, bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed	NA|309aa|up_2|NZ_CP042468.1_6034183_6035110_+	TIGR01136, Cysteine_synthase, cysteine synthase	NA|286aa|up_1|NZ_CP042468.1_6035116_6035974_+	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism]	NA|262aa|up_0|NZ_CP042468.1_6035985_6036771_+	cd16329, LolA_like, proteins similar to periplasmic molecular chaperone LolA, the outer membrane lipoprotein receptor LolB and the periplasmic protein RseB	NA|87aa|down_0|NZ_CP042468.1_6038778_6039039_-	COG2835, COG2835, Uncharacterized conserved protein [Function unknown]	NA|196aa|down_1|NZ_CP042468.1_6039041_6039629_-	cd07316, terB_like_DjlA, N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins	NA|409aa|down_2|NZ_CP042468.1_6040047_6041274_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|694aa|down_3|NZ_CP042468.1_6041415_6043497_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|454aa|down_4|NZ_CP042468.1_6043884_6045246_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|873aa|down_5|NZ_CP042468.1_6045727_6048346_+	pfam14353, CpXC, CpXC protein	NA|247aa|down_6|NZ_CP042468.1_6048390_6049131_+	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|803aa|down_7|NZ_CP042468.1_6049196_6051605_-	pfam13360, PQQ_2, PQQ-like domain	NA|155aa|down_8|NZ_CP042468.1_6051607_6052072_-	NA	NA|141aa|down_9|NZ_CP042468.1_6052499_6052922_+	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	44	6170039-6170259	4	PILER-CR	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	ACACCTGTCAGCTCAACACCTGCGGCGACGGCTAC	35	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|176aa|up_9|NZ_CP042468.1_6157354_6157882_+,NA|89aa|up_8|NZ_CP042468.1_6157886_6158153_+,NA|238aa|up_3|NZ_CP042468.1_6162810_6163524_-,NA|62aa|down_6|NZ_CP042468.1_6179621_6179807_-	NA|176aa|up_9|NZ_CP042468.1_6157354_6157882_+	NA	NA|89aa|up_8|NZ_CP042468.1_6157886_6158153_+	NA	NA|279aa|up_7|NZ_CP042468.1_6158563_6159400_+	PRK07109, PRK07109, short chain dehydrogenase; Provisional	NA|430aa|up_6|NZ_CP042468.1_6159492_6160782_-	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase	NA|306aa|up_5|NZ_CP042468.1_6160902_6161820_-	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily	NA|312aa|up_4|NZ_CP042468.1_6161852_6162788_-	pfam01694, Rhomboid, Rhomboid family	NA|238aa|up_3|NZ_CP042468.1_6162810_6163524_-	NA	NA|302aa|up_2|NZ_CP042468.1_6163615_6164521_-	pfam08907, DUF1853, Domain of unknown function (DUF1853)	NA|196aa|up_1|NZ_CP042468.1_6164647_6165235_+	cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168	NA|131aa|up_0|NZ_CP042468.1_6165248_6165641_+	COG1569, COG1569, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|490aa|down_0|NZ_CP042468.1_6170795_6172265_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|262aa|down_1|NZ_CP042468.1_6172438_6173224_-	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|1339aa|down_2|NZ_CP042468.1_6173220_6177237_-	pfam13229, Beta_helix, Right handed beta helix region	NA|282aa|down_3|NZ_CP042468.1_6177342_6178188_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|193aa|down_4|NZ_CP042468.1_6178345_6178924_+	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|223aa|down_5|NZ_CP042468.1_6178913_6179582_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|62aa|down_6|NZ_CP042468.1_6179621_6179807_-	NA	NA|339aa|down_7|NZ_CP042468.1_6179918_6180935_+	cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain	NA|342aa|down_8|NZ_CP042468.1_6180986_6182012_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|415aa|down_9|NZ_CP042468.1_6182213_6183458_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	45	6254807-6255065	4	CRT	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGACNCCGACGCCGACGGCNNC	22	1	1	6255015-6255043	NZ_CP042468.1_2416026-2415998	NA	4	4	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|102aa|up_7|NZ_CP042468.1_6240718_6241024_-,NA|308aa|up_6|NZ_CP042468.1_6241402_6242326_+,NA|113aa|down_1|NZ_CP042468.1_6257675_6258014_+,NA|77aa|down_3|NZ_CP042468.1_6258879_6259110_+	NA|222aa|up_9|NZ_CP042468.1_6238450_6239116_-	pfam09557, DUF2382, Domain of unknown function (DUF2382)	NA|441aa|up_8|NZ_CP042468.1_6239376_6240699_+	TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase	NA|102aa|up_7|NZ_CP042468.1_6240718_6241024_-	NA	NA|308aa|up_6|NZ_CP042468.1_6241402_6242326_+	NA	NA|573aa|up_5|NZ_CP042468.1_6242380_6244099_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|267aa|up_4|NZ_CP042468.1_6244126_6244927_-	sd00006, TPR, Tetratricopeptide repeat	NA|420aa|up_3|NZ_CP042468.1_6245067_6246327_+	COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair]	NA|630aa|up_2|NZ_CP042468.1_6246489_6248379_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|280aa|up_1|NZ_CP042468.1_6248556_6249396_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|1145aa|up_0|NZ_CP042468.1_6249444_6252879_-	TIGR00864, PCC, polycystin cation channel protein	NA|227aa|down_0|NZ_CP042468.1_6256757_6257438_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|113aa|down_1|NZ_CP042468.1_6257675_6258014_+	NA	NA|298aa|down_2|NZ_CP042468.1_6257989_6258883_+	COG1429, CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism]	NA|77aa|down_3|NZ_CP042468.1_6258879_6259110_+	NA	NA|288aa|down_4|NZ_CP042468.1_6259220_6260084_+	PRK10526, PRK10526, acyl-CoA thioesterase II; Provisional	NA|172aa|down_5|NZ_CP042468.1_6260091_6260607_-	pfam07274, DUF1440, Protein of unknown function (DUF1440)	NA|362aa|down_6|NZ_CP042468.1_6261858_6262944_-	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein	NA|393aa|down_7|NZ_CP042468.1_6263170_6264349_+	pfam03691, UPF0167, Uncharacterized protein family (UPF0167)	NA|478aa|down_8|NZ_CP042468.1_6264385_6265819_-	PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated	NA|313aa|down_9|NZ_CP042468.1_6265927_6266866_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	46	6704136-6704231	38	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GAGGGCAAGATGCCCCCGCACCGAACA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|264aa|down_0|NZ_CP042468.1_6704759_6705551_-	NA|280aa|up_9|NZ_CP042468.1_6689583_6690423_+	pfam16015, Promethin, Promethin	NA|785aa|up_8|NZ_CP042468.1_6690496_6692851_+	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|550aa|up_7|NZ_CP042468.1_6692925_6694575_+	pfam01030, Recep_L_domain, Receptor L domain	NA|224aa|up_6|NZ_CP042468.1_6694650_6695322_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|438aa|up_5|NZ_CP042468.1_6695332_6696646_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|247aa|up_4|NZ_CP042468.1_6696799_6697540_+	COG3658, COG3658, Cytochrome b [Energy production and conversion]	NA|405aa|up_3|NZ_CP042468.1_6697711_6698926_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|760aa|up_2|NZ_CP042468.1_6699077_6701357_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|387aa|up_1|NZ_CP042468.1_6701406_6702567_-	NF000535, MSCRAMM_SdrC, MSCRAMM family adhesin SdrC	NA|347aa|up_0|NZ_CP042468.1_6702961_6704002_-	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|264aa|down_0|NZ_CP042468.1_6704759_6705551_-	NA	NA|522aa|down_1|NZ_CP042468.1_6706177_6707743_-	pfam01663, Phosphodiest, Type I phosphodiesterase / nucleotide pyrophosphatase	NA|533aa|down_2|NZ_CP042468.1_6707800_6709399_-	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family	NA|612aa|down_3|NZ_CP042468.1_6709395_6711231_-	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|467aa|down_4|NZ_CP042468.1_6711229_6712630_+	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|780aa|down_5|NZ_CP042468.1_6712604_6714944_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|186aa|down_6|NZ_CP042468.1_6715125_6715683_-	TIGR02959, RNA_polymerase_sigma_factor_SigZ, RNA polymerase sigma factor, SigZ family	NA|328aa|down_7|NZ_CP042468.1_6715769_6716753_-	cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|295aa|down_8|NZ_CP042468.1_6716939_6717824_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|595aa|down_9|NZ_CP042468.1_6717854_6719639_-	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13)
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	47	6740809-6740919	39	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GTTTTTTCTTGCCAGAACGCCAACCAA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|199aa|up_8|NZ_CP042468.1_6728275_6728872_-,NA|200aa|up_5|NZ_CP042468.1_6731799_6732399_+,NA|247aa|up_0|NZ_CP042468.1_6740011_6740752_+,NA|177aa|down_2|NZ_CP042468.1_6744155_6744686_-,NA|87aa|down_5|NZ_CP042468.1_6747062_6747323_-,NA|298aa|down_6|NZ_CP042468.1_6749575_6750469_-,NA|65aa|down_7|NZ_CP042468.1_6750465_6750660_-,NA|544aa|down_9|NZ_CP042468.1_6752256_6753888_-	NA|420aa|up_9|NZ_CP042468.1_6726991_6728251_-	COG3268, COG3268, Uncharacterized conserved protein [Function unknown]	NA|199aa|up_8|NZ_CP042468.1_6728275_6728872_-	NA	NA|353aa|up_7|NZ_CP042468.1_6729097_6730156_+	COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism]	NA|493aa|up_6|NZ_CP042468.1_6730159_6731638_-	PRK08262, PRK08262, M20 family peptidase	NA|200aa|up_5|NZ_CP042468.1_6731799_6732399_+	NA	NA|801aa|up_4|NZ_CP042468.1_6732432_6734835_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|330aa|up_3|NZ_CP042468.1_6734838_6735828_-	pfam13679, Methyltransf_32, Methyltransferase domain	NA|770aa|up_2|NZ_CP042468.1_6735824_6738134_-	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|281aa|up_1|NZ_CP042468.1_6738918_6739761_+	cd07709, flavodiiron_proteins_MBL-fold, catalytic domain of flavodiiron proteins (FDPs) and related proteins; MBL-fold metallo-hydrolase domain	NA|247aa|up_0|NZ_CP042468.1_6740011_6740752_+	NA	NA|585aa|down_0|NZ_CP042468.1_6741144_6742899_-	PRK06263, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|332aa|down_1|NZ_CP042468.1_6743163_6744159_-	pfam00665, rve, Integrase core domain	NA|177aa|down_2|NZ_CP042468.1_6744155_6744686_-	NA	NA|185aa|down_3|NZ_CP042468.1_6745117_6745672_+	cd07233, GlxI_Zn, Glyoxalase I that uses Zn(++) as cofactor	NA|352aa|down_4|NZ_CP042468.1_6745960_6747016_+	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases	NA|87aa|down_5|NZ_CP042468.1_6747062_6747323_-	NA	NA|298aa|down_6|NZ_CP042468.1_6749575_6750469_-	NA	NA|65aa|down_7|NZ_CP042468.1_6750465_6750660_-	NA	NA|477aa|down_8|NZ_CP042468.1_6750762_6752193_-	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	NA|544aa|down_9|NZ_CP042468.1_6752256_6753888_-	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	48	6781276-6781372	40	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GGACACGGTGAGGGAATGGGGTTC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|254aa|down_1|NZ_CP042468.1_6782044_6782806_-,NA|435aa|down_4|NZ_CP042468.1_6784862_6786167_-,NA|449aa|down_6|NZ_CP042468.1_6787621_6788968_-	NA|349aa|up_9|NZ_CP042468.1_6770449_6771496_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|401aa|up_8|NZ_CP042468.1_6771625_6772828_+	pfam00072, Response_reg, Response regulator receiver domain	NA|137aa|up_7|NZ_CP042468.1_6772835_6773246_+	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like	NA|181aa|up_6|NZ_CP042468.1_6773231_6773774_-	pfam08547, CIA30, Complex I intermediate-associated protein 30 (CIA30)	NA|112aa|up_5|NZ_CP042468.1_6773770_6774106_-	COG0633, Fdx, Ferredoxin [Energy production and conversion]	NA|352aa|up_4|NZ_CP042468.1_6774079_6775135_+	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|307aa|up_3|NZ_CP042468.1_6775232_6776153_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|265aa|up_2|NZ_CP042468.1_6776513_6777308_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|688aa|up_1|NZ_CP042468.1_6777352_6779416_+	TIGR03811, tyrosine_decarboxylase, tyrosine decarboxylase, Enterococcus type	NA|535aa|up_0|NZ_CP042468.1_6779462_6781067_-	pfam13229, Beta_helix, Right handed beta helix region	NA|145aa|down_0|NZ_CP042468.1_6781519_6781954_+	PRK10562, PRK10562, putative acetyltransferase; Provisional	NA|254aa|down_1|NZ_CP042468.1_6782044_6782806_-	NA	NA|173aa|down_2|NZ_CP042468.1_6782925_6783444_+	pfam13778, DUF4174, Domain of unknown function (DUF4174)	NA|408aa|down_3|NZ_CP042468.1_6783453_6784677_-	NF033189, internalin_A, class 1 internalin InlA	NA|435aa|down_4|NZ_CP042468.1_6784862_6786167_-	NA	NA|399aa|down_5|NZ_CP042468.1_6786395_6787592_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|449aa|down_6|NZ_CP042468.1_6787621_6788968_-	NA	NA|414aa|down_7|NZ_CP042468.1_6789184_6790426_-	COG4639, COG4639, Predicted kinase [General function prediction only]	NA|212aa|down_8|NZ_CP042468.1_6790429_6791065_-	pfam09414, RNA_ligase, RNA ligase	NA|454aa|down_9|NZ_CP042468.1_6791495_6792857_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	49	6794498-6794639	41	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CCAAATTGGCCGCCCCCGTTAGGGAACGGGGTTCCCCGACGAGCCG	46	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|254aa|up_9|NZ_CP042468.1_6782044_6782806_-,NA|435aa|up_6|NZ_CP042468.1_6784862_6786167_-,NA|449aa|up_4|NZ_CP042468.1_6787621_6788968_-,NA|681aa|down_0|NZ_CP042468.1_6794703_6796746_-,NA|267aa|down_1|NZ_CP042468.1_6796742_6797543_-,NA|350aa|down_7|NZ_CP042468.1_6805230_6806280_+	NA|254aa|up_9|NZ_CP042468.1_6782044_6782806_-	NA	NA|173aa|up_8|NZ_CP042468.1_6782925_6783444_+	pfam13778, DUF4174, Domain of unknown function (DUF4174)	NA|408aa|up_7|NZ_CP042468.1_6783453_6784677_-	NF033189, internalin_A, class 1 internalin InlA	NA|435aa|up_6|NZ_CP042468.1_6784862_6786167_-	NA	NA|399aa|up_5|NZ_CP042468.1_6786395_6787592_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|449aa|up_4|NZ_CP042468.1_6787621_6788968_-	NA	NA|414aa|up_3|NZ_CP042468.1_6789184_6790426_-	COG4639, COG4639, Predicted kinase [General function prediction only]	NA|212aa|up_2|NZ_CP042468.1_6790429_6791065_-	pfam09414, RNA_ligase, RNA ligase	NA|454aa|up_1|NZ_CP042468.1_6791495_6792857_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|304aa|up_0|NZ_CP042468.1_6793582_6794494_+	pfam06877, RraB, Regulator of ribonuclease activity B	NA|681aa|down_0|NZ_CP042468.1_6794703_6796746_-	NA	NA|267aa|down_1|NZ_CP042468.1_6796742_6797543_-	NA	NA|429aa|down_2|NZ_CP042468.1_6797886_6799173_-	pfam07819, PGAP1, PGAP1-like protein	NA|249aa|down_3|NZ_CP042468.1_6799199_6799946_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|1023aa|down_4|NZ_CP042468.1_6800134_6803203_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|405aa|down_5|NZ_CP042468.1_6803378_6804593_+	COG1661, COG1661, Predicted DNA-binding protein with PD1-like DNA-binding motif [General function prediction only]	NA|128aa|down_6|NZ_CP042468.1_6804807_6805191_+	smart00960, Robl_LC7, Roadblock/LC7 domain	NA|350aa|down_7|NZ_CP042468.1_6805230_6806280_+	NA	NA|264aa|down_8|NZ_CP042468.1_6806279_6807071_+	TIGR02373, Photoactive_yellow_protein, photoactive yellow protein	NA|183aa|down_9|NZ_CP042468.1_6807154_6807703_+	cd07909, YciF, YciF bacterial stress response protein, ferritin-like iron-binding domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	50	6889131-6889244	42	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CCGCTATTTGGGGCGCCTGAACTACGGCGCGAAC	34	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|136aa|up_9|NZ_CP042468.1_6874483_6874891_+,NA|60aa|up_7|NZ_CP042468.1_6878061_6878241_-,NA|215aa|down_3|NZ_CP042468.1_6891804_6892449_-	NA|136aa|up_9|NZ_CP042468.1_6874483_6874891_+	NA	NA|711aa|up_8|NZ_CP042468.1_6875833_6877966_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|60aa|up_7|NZ_CP042468.1_6878061_6878241_-	NA	NA|258aa|up_6|NZ_CP042468.1_6878250_6879024_-	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|377aa|up_5|NZ_CP042468.1_6879047_6880178_-	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA|647aa|up_4|NZ_CP042468.1_6880281_6882222_-	PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	NA|369aa|up_3|NZ_CP042468.1_6882786_6883893_-	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown]	NA|342aa|up_2|NZ_CP042468.1_6883934_6884960_-	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit	NA|485aa|up_1|NZ_CP042468.1_6885227_6886682_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|694aa|up_0|NZ_CP042468.1_6887011_6889093_+	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain	NA|327aa|down_0|NZ_CP042468.1_6889512_6890493_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|215aa|down_1|NZ_CP042468.1_6890614_6891259_+	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase	NA|149aa|down_2|NZ_CP042468.1_6891343_6891790_+	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|215aa|down_3|NZ_CP042468.1_6891804_6892449_-	NA	NA|306aa|down_4|NZ_CP042468.1_6892562_6893480_-	pfam00892, EamA, EamA-like transporter family	NA|323aa|down_5|NZ_CP042468.1_6893805_6894774_+	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]	NA|92aa|down_6|NZ_CP042468.1_6894842_6895118_+	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins	NA|331aa|down_7|NZ_CP042468.1_6895074_6896067_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|226aa|down_8|NZ_CP042468.1_6896137_6896815_+	cd08073, MPN_NLPC_P60, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains	NA|292aa|down_9|NZ_CP042468.1_6896804_6897680_-	cd16281, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	51	6944525-6944617	43	CRISPRCasFinder	no	RT	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Unclear	GCCCCCGCACCGAACAGTTCGCGC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|570aa|up_8|NZ_CP042468.1_6929952_6931662_+,NA|729aa|up_1|NZ_CP042468.1_6940478_6942665_+,NA|177aa|down_3|NZ_CP042468.1_6949952_6950483_+	NA|278aa|up_9|NZ_CP042468.1_6928468_6929302_-	pfam02517, Abi, CAAX protease self-immunity	NA|570aa|up_8|NZ_CP042468.1_6929952_6931662_+	NA	NA|704aa|up_7|NZ_CP042468.1_6931771_6933883_+	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|677aa|up_6|NZ_CP042468.1_6934133_6936164_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|340aa|up_5|NZ_CP042468.1_6936260_6937280_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|376aa|up_4|NZ_CP042468.1_6937469_6938597_+	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated	NA|221aa|up_3|NZ_CP042468.1_6938593_6939256_+	PRK00023, cmk, (d)CMP kinase	NA|132aa|up_2|NZ_CP042468.1_6939618_6940014_-	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|729aa|up_1|NZ_CP042468.1_6940478_6942665_+	NA	NA|554aa|up_0|NZ_CP042468.1_6942824_6944486_+	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein	NA|555aa|down_0|NZ_CP042468.1_6944904_6946569_+	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein	NA|541aa|down_1|NZ_CP042468.1_6947253_6948876_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|251aa|down_2|NZ_CP042468.1_6948862_6949615_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|177aa|down_3|NZ_CP042468.1_6949952_6950483_+	NA	NA|332aa|down_4|NZ_CP042468.1_6950479_6951475_+	pfam00665, rve, Integrase core domain	RT|216aa|down_5|NZ_CP042468.1_6951542_6952190_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|142aa|down_6|NZ_CP042468.1_6952074_6952500_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|1483aa|down_7|NZ_CP042468.1_6952850_6957299_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|1662aa|down_8|NZ_CP042468.1_6957582_6962568_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|400aa|down_9|NZ_CP042468.1_6962688_6963888_-	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	52	6986957-6987069	44	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGAAGCCTCCGAGGCGAGCGAAG	23	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|199aa|up_8|NZ_CP042468.1_6977662_6978259_+,NA|258aa|up_5|NZ_CP042468.1_6980189_6980963_+,NA|279aa|down_3|NZ_CP042468.1_6992266_6993103_+	NA|850aa|up_9|NZ_CP042468.1_6974858_6977408_-	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane]	NA|199aa|up_8|NZ_CP042468.1_6977662_6978259_+	NA	NA|267aa|up_7|NZ_CP042468.1_6978265_6979066_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|361aa|up_6|NZ_CP042468.1_6979096_6980179_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|258aa|up_5|NZ_CP042468.1_6980189_6980963_+	NA	NA|224aa|up_4|NZ_CP042468.1_6980863_6981535_-	cd00446, GrpE, nucleotide exchange factor GrpE	NA|125aa|up_3|NZ_CP042468.1_6981902_6982277_+	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|581aa|up_2|NZ_CP042468.1_6982435_6984178_+	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins	NA|351aa|up_1|NZ_CP042468.1_6984182_6985235_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|364aa|up_0|NZ_CP042468.1_6985558_6986650_+	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|610aa|down_0|NZ_CP042468.1_6987971_6989801_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|371aa|down_1|NZ_CP042468.1_6989814_6990927_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|428aa|down_2|NZ_CP042468.1_6990946_6992230_+	cd06339, PBP1_YraM_LppC_lipoprotein-like, periplasmic binding component of lipoprotein LppC, an immunodominant antigen	NA|279aa|down_3|NZ_CP042468.1_6992266_6993103_+	NA	NA|332aa|down_4|NZ_CP042468.1_6993153_6994149_+	cd02194, ThiL, ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine	NA|274aa|down_5|NZ_CP042468.1_6994148_6994970_+	PRK08317, PRK08317, hypothetical protein; Provisional	NA|406aa|down_6|NZ_CP042468.1_6995268_6996486_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]	NA|276aa|down_7|NZ_CP042468.1_6996495_6997323_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|179aa|down_8|NZ_CP042468.1_6997813_6998350_+	smart00867, YceI, YceI-like domain	NA|219aa|down_9|NZ_CP042468.1_6998386_6999043_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	53	7481559-7481831	45	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	CGGAAAGAGGCGTTGGAGGAACGTACG	27	0	0	NA	NA	NA	3	3	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|265aa|down_0|NZ_CP042468.1_7482711_7483506_+,NA|314aa|down_2|NZ_CP042468.1_7486109_7487051_+	NA|488aa|up_9|NZ_CP042468.1_7468670_7470134_-	PRK03640, PRK03640, o-succinylbenzoate--CoA ligase	NA|368aa|up_8|NZ_CP042468.1_7470130_7471234_-	cd03320, OSBS, o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway	NA|300aa|up_7|NZ_CP042468.1_7471230_7472130_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|623aa|up_6|NZ_CP042468.1_7472137_7474006_-	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	NA|444aa|up_5|NZ_CP042468.1_7474008_7475340_-	pfam00425, Chorismate_bind, chorismate binding enzyme	NA|299aa|up_4|NZ_CP042468.1_7475362_7476259_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase	NA|335aa|up_3|NZ_CP042468.1_7476383_7477388_+	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|215aa|up_2|NZ_CP042468.1_7477384_7478029_+	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|491aa|up_1|NZ_CP042468.1_7478140_7479613_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|522aa|up_0|NZ_CP042468.1_7479761_7481327_+	PRK00074, guaA, GMP synthase; Reviewed	NA|265aa|down_0|NZ_CP042468.1_7482711_7483506_+	NA	NA|580aa|down_1|NZ_CP042468.1_7484208_7485948_+	sd00001, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|314aa|down_2|NZ_CP042468.1_7486109_7487051_+	NA	NA|482aa|down_3|NZ_CP042468.1_7487129_7488575_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|753aa|down_4|NZ_CP042468.1_7488688_7490947_+	PRK14282, PRK14282, chaperone protein DnaJ; Provisional	NA|418aa|down_5|NZ_CP042468.1_7490984_7492238_+	PRK04135, PRK04135, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|232aa|down_6|NZ_CP042468.1_7492321_7493017_-	COG3147, DedD, Uncharacterized protein conserved in bacteria [Function unknown]	NA|300aa|down_7|NZ_CP042468.1_7493195_7494095_-	PLN02929, PLN02929, NADH kinase	NA|546aa|down_8|NZ_CP042468.1_7494255_7495893_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|642aa|down_9|NZ_CP042468.1_7496038_7497964_+	PRK06370, PRK06370, FAD-containing oxidoreductase
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	54	7574636-7574738	46	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GTTGACGTCAAAACCCCGCGGCAAGCCGCGGGGCTGCAC	39	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA|511aa|up_3|NZ_CP042468.1_7570073_7571606_-,NA|205aa|down_9|NZ_CP042468.1_7585359_7585974_+	NA|833aa|up_9|NZ_CP042468.1_7560631_7563130_-	COG3428, COG3428, Predicted membrane protein [Function unknown]	NA|296aa|up_8|NZ_CP042468.1_7563426_7564314_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|272aa|up_7|NZ_CP042468.1_7564317_7565133_-	COG2430, COG2430, Uncharacterized conserved protein [Function unknown]	NA|458aa|up_6|NZ_CP042468.1_7565458_7566832_+	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|252aa|up_5|NZ_CP042468.1_7566853_7567609_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|612aa|up_4|NZ_CP042468.1_7567675_7569511_-	pfam13569, DUF4132, Domain of unknown function (DUF4132)	NA|511aa|up_3|NZ_CP042468.1_7570073_7571606_-	NA	NA|118aa|up_2|NZ_CP042468.1_7571605_7571959_-	COG1729, COG1729, Uncharacterized protein conserved in bacteria [Function unknown]	NA|322aa|up_1|NZ_CP042468.1_7572014_7572980_+	PRK00089, era, GTPase Era; Reviewed	NA|439aa|up_0|NZ_CP042468.1_7573108_7574425_+	PRK00093, PRK00093, GTP-binding protein Der; Reviewed	NA|413aa|down_0|NZ_CP042468.1_7574782_7576021_-	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|191aa|down_1|NZ_CP042468.1_7577020_7577593_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|277aa|down_2|NZ_CP042468.1_7577805_7578636_+	sd00006, TPR, Tetratricopeptide repeat	NA|392aa|down_3|NZ_CP042468.1_7578651_7579827_+	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL	NA|239aa|down_4|NZ_CP042468.1_7579870_7580587_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|319aa|down_5|NZ_CP042468.1_7580550_7581507_-	cd07715, TaR3-like_MBL-fold, MBL-fold metallo-hydrolase domain of Myxococcus xanthus TaR3 and related proteins; MBL-fold metallo-hydrolase domain	NA|279aa|down_6|NZ_CP042468.1_7581667_7582504_+	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|669aa|down_7|NZ_CP042468.1_7582454_7584461_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|308aa|down_8|NZ_CP042468.1_7584330_7585254_+	pfam01904, DUF72, Protein of unknown function DUF72	NA|205aa|down_9|NZ_CP042468.1_7585359_7585974_+	NA
GCF_007993775.1_ASM799377v1	NZ_CP042468	Bradymonadales bacterium YN101 chromosome, complete genome	55	8002797-8002965	47	CRISPRCasFinder	no		cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	Orphan	GTGGATCGAAGTGGAGGGACGTGGTGGATCGAAGT	35	1	1	8002910-8002930	NZ_CP042468.1_8002956-8002976	NA	2	2	Orphan	cas3,WYL,csa3,cas8u1,DEDDh,DinG,RT,Cas9_archaeal	NA,NA|68aa|down_0|NZ_CP042468.1_8003059_8003263_-,NA|91aa|down_7|NZ_CP042468.1_8014135_8014408_+,NA|163aa|down_9|NZ_CP042468.1_8015345_8015834_+	NA|355aa|up_9|NZ_CP042468.1_7989744_7990809_-	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase	NA|374aa|up_8|NZ_CP042468.1_7991083_7992205_-	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	NA|423aa|up_7|NZ_CP042468.1_7992204_7993473_-	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|380aa|up_6|NZ_CP042468.1_7993512_7994652_-	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|490aa|up_5|NZ_CP042468.1_7994727_7996197_-	TIGR01143, murF, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	NA|518aa|up_4|NZ_CP042468.1_7996196_7997750_-	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|691aa|up_3|NZ_CP042468.1_7997837_7999910_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|119aa|up_2|NZ_CP042468.1_8000013_8000370_-	TIGR02209, Cell_division_protein_FtsL, cell division protein FtsL	NA|306aa|up_1|NZ_CP042468.1_8000506_8001424_-	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA|169aa|up_0|NZ_CP042468.1_8001864_8002371_-	PRK00326, PRK00326, transcriptional regulator MraZ	NA|68aa|down_0|NZ_CP042468.1_8003059_8003263_-	NA	NA|586aa|down_1|NZ_CP042468.1_8003419_8005177_-	sd00038, Kelch, Kelch repeat	NA|525aa|down_2|NZ_CP042468.1_8005176_8006751_-	pfam08308, PEGA, PEGA domain	NA|536aa|down_3|NZ_CP042468.1_8007108_8008716_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|231aa|down_4|NZ_CP042468.1_8008712_8009405_+	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only]	NA|939aa|down_5|NZ_CP042468.1_8009385_8012202_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|533aa|down_6|NZ_CP042468.1_8012452_8014051_+	pfam13413, HTH_25, Helix-turn-helix domain	NA|91aa|down_7|NZ_CP042468.1_8014135_8014408_+	NA	NA|298aa|down_8|NZ_CP042468.1_8014455_8015349_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|163aa|down_9|NZ_CP042468.1_8015345_8015834_+	NA
