assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007993755.1_ASM799375v1	NZ_CP042467	Bradymonadales bacterium V1718 chromosome, complete genome	1	1722383-1722480	1	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	Orphan	ACCTGATTGTCACAATCGTTGTC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	NA,NA|404aa|down_4|NZ_CP042467.1_1735879_1737091_-,NA|407aa|down_8|NZ_CP042467.1_1740207_1741428_-,NA|321aa|down_9|NZ_CP042467.1_1741457_1742420_-	NA|385aa|up_9|NZ_CP042467.1_1712601_1713756_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|201aa|up_8|NZ_CP042467.1_1713755_1714358_+	TIGR03328, dehydratase-enolase-phosphatase_complex_1, methylthioribulose-1-phosphate dehydratase	NA|416aa|up_7|NZ_CP042467.1_1714336_1715584_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|500aa|up_6|NZ_CP042467.1_1715594_1717094_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|203aa|up_5|NZ_CP042467.1_1717120_1717729_-	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|172aa|up_4|NZ_CP042467.1_1717741_1718257_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|258aa|up_3|NZ_CP042467.1_1718258_1719032_-	PRK13318, PRK13318, type III pantothenate kinase	NA|310aa|up_2|NZ_CP042467.1_1719155_1720085_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|284aa|up_1|NZ_CP042467.1_1720084_1720936_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|388aa|up_0|NZ_CP042467.1_1720948_1722112_+	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|1570aa|down_0|NZ_CP042467.1_1726037_1730747_+	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain	NA|350aa|down_1|NZ_CP042467.1_1730922_1731972_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|625aa|down_2|NZ_CP042467.1_1732021_1733896_-	TIGR04201, Myxo_Cys_RPT, Cys-rich repeat, Myxococcales-type	NA|597aa|down_3|NZ_CP042467.1_1733980_1735771_-	TIGR02266, gmx_TIGR02266, Myxococcus xanthus paralogous domain TIGR02266	NA|404aa|down_4|NZ_CP042467.1_1735879_1737091_-	NA	NA|393aa|down_5|NZ_CP042467.1_1737092_1738271_-	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|419aa|down_6|NZ_CP042467.1_1738384_1739641_+	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|188aa|down_7|NZ_CP042467.1_1739637_1740201_+	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|407aa|down_8|NZ_CP042467.1_1740207_1741428_-	NA	NA|321aa|down_9|NZ_CP042467.1_1741457_1742420_-	NA
GCF_007993755.1_ASM799375v1	NZ_CP042467	Bradymonadales bacterium V1718 chromosome, complete genome	2	1908379-1908540	2	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	Orphan	TTGGGGATGTTTGTGATAACTGC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	NA|637aa|up_5|NZ_CP042467.1_1899874_1901785_+,NA|158aa|up_4|NZ_CP042467.1_1901760_1902234_-,NA|365aa|up_2|NZ_CP042467.1_1903860_1904955_+,NA|555aa|up_1|NZ_CP042467.1_1905094_1906759_+,NA|1016aa|down_0|NZ_CP042467.1_1909815_1912863_+,NA|197aa|down_7|NZ_CP042467.1_1920350_1920941_+	NA|399aa|up_9|NZ_CP042467.1_1893411_1894608_+	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA|225aa|up_8|NZ_CP042467.1_1894604_1895279_+	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE)	NA|374aa|up_7|NZ_CP042467.1_1895275_1896397_+	pfam07728, AAA_5, AAA domain (dynein-related subfamily)	NA|393aa|up_6|NZ_CP042467.1_1898699_1899878_+	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein	NA|637aa|up_5|NZ_CP042467.1_1899874_1901785_+	NA	NA|158aa|up_4|NZ_CP042467.1_1901760_1902234_-	NA	NA|408aa|up_3|NZ_CP042467.1_1902301_1903525_-	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|365aa|up_2|NZ_CP042467.1_1903860_1904955_+	NA	NA|555aa|up_1|NZ_CP042467.1_1905094_1906759_+	NA	NA|209aa|up_0|NZ_CP042467.1_1906755_1907382_-	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART)	NA|1016aa|down_0|NZ_CP042467.1_1909815_1912863_+	NA	NA|361aa|down_1|NZ_CP042467.1_1912846_1913929_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|870aa|down_2|NZ_CP042467.1_1913931_1916541_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|391aa|down_3|NZ_CP042467.1_1916579_1917752_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|231aa|down_4|NZ_CP042467.1_1917776_1918469_+	sd00006, TPR, Tetratricopeptide repeat	NA|363aa|down_5|NZ_CP042467.1_1918480_1919569_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|112aa|down_6|NZ_CP042467.1_1919597_1919933_-	pfam08899, DUF1844, Domain of unknown function (DUF1844)	NA|197aa|down_7|NZ_CP042467.1_1920350_1920941_+	NA	NA|479aa|down_8|NZ_CP042467.1_1920937_1922374_+	cd04278, ZnMc_MMP, Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family	NA|276aa|down_9|NZ_CP042467.1_1922366_1923194_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain
GCF_007993755.1_ASM799375v1	NZ_CP042467	Bradymonadales bacterium V1718 chromosome, complete genome	3	1908694-1908854	3	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	Orphan	TTGGGGATGTTTGTGATAACTGC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	NA|637aa|up_5|NZ_CP042467.1_1899874_1901785_+,NA|158aa|up_4|NZ_CP042467.1_1901760_1902234_-,NA|365aa|up_2|NZ_CP042467.1_1903860_1904955_+,NA|555aa|up_1|NZ_CP042467.1_1905094_1906759_+,NA|1016aa|down_0|NZ_CP042467.1_1909815_1912863_+,NA|197aa|down_7|NZ_CP042467.1_1920350_1920941_+	NA|399aa|up_9|NZ_CP042467.1_1893411_1894608_+	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA|225aa|up_8|NZ_CP042467.1_1894604_1895279_+	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE)	NA|374aa|up_7|NZ_CP042467.1_1895275_1896397_+	pfam07728, AAA_5, AAA domain (dynein-related subfamily)	NA|393aa|up_6|NZ_CP042467.1_1898699_1899878_+	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein	NA|637aa|up_5|NZ_CP042467.1_1899874_1901785_+	NA	NA|158aa|up_4|NZ_CP042467.1_1901760_1902234_-	NA	NA|408aa|up_3|NZ_CP042467.1_1902301_1903525_-	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat	NA|365aa|up_2|NZ_CP042467.1_1903860_1904955_+	NA	NA|555aa|up_1|NZ_CP042467.1_1905094_1906759_+	NA	NA|209aa|up_0|NZ_CP042467.1_1906755_1907382_-	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART)	NA|1016aa|down_0|NZ_CP042467.1_1909815_1912863_+	NA	NA|361aa|down_1|NZ_CP042467.1_1912846_1913929_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|870aa|down_2|NZ_CP042467.1_1913931_1916541_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|391aa|down_3|NZ_CP042467.1_1916579_1917752_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|231aa|down_4|NZ_CP042467.1_1917776_1918469_+	sd00006, TPR, Tetratricopeptide repeat	NA|363aa|down_5|NZ_CP042467.1_1918480_1919569_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|112aa|down_6|NZ_CP042467.1_1919597_1919933_-	pfam08899, DUF1844, Domain of unknown function (DUF1844)	NA|197aa|down_7|NZ_CP042467.1_1920350_1920941_+	NA	NA|479aa|down_8|NZ_CP042467.1_1920937_1922374_+	cd04278, ZnMc_MMP, Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family	NA|276aa|down_9|NZ_CP042467.1_1922366_1923194_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain
GCF_007993755.1_ASM799375v1	NZ_CP042467	Bradymonadales bacterium V1718 chromosome, complete genome	4	2832729-2832834	4	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	Orphan	TCACCGGCCGGTCCTTGAGGACCTT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	NA|319aa|up_9|NZ_CP042467.1_2820938_2821895_-,NA|160aa|up_8|NZ_CP042467.1_2821940_2822420_-,NA|865aa|up_3|NZ_CP042467.1_2825139_2827734_-,NA|290aa|down_0|NZ_CP042467.1_2833099_2833969_+,NA|1301aa|down_3|NZ_CP042467.1_2835049_2838952_+	NA|319aa|up_9|NZ_CP042467.1_2820938_2821895_-	NA	NA|160aa|up_8|NZ_CP042467.1_2821940_2822420_-	NA	NA|221aa|up_7|NZ_CP042467.1_2822495_2823158_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|258aa|up_6|NZ_CP042467.1_2823067_2823841_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|91aa|up_5|NZ_CP042467.1_2823843_2824116_-	TIGR01683, thiamine_biosynthesis_protein_ThiS, thiamine biosynthesis protein ThiS	NA|330aa|up_4|NZ_CP042467.1_2824153_2825143_+	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|865aa|up_3|NZ_CP042467.1_2825139_2827734_-	NA	NA|429aa|up_2|NZ_CP042467.1_2827730_2829017_-	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]	NA|411aa|up_1|NZ_CP042467.1_2829083_2830316_-	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins	NA|530aa|up_0|NZ_CP042467.1_2830393_2831983_-	pfam01391, Collagen, Collagen triple helix repeat (20 copies)	NA|290aa|down_0|NZ_CP042467.1_2833099_2833969_+	NA	NA|261aa|down_1|NZ_CP042467.1_2833968_2834751_+	pfam02517, Abi, CAAX protease self-immunity	NA|85aa|down_2|NZ_CP042467.1_2834743_2834998_+	pfam00887, ACBP, Acyl CoA binding protein	NA|1301aa|down_3|NZ_CP042467.1_2835049_2838952_+	NA	NA|133aa|down_4|NZ_CP042467.1_2839689_2840088_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|444aa|down_5|NZ_CP042467.1_2840097_2841429_-	pfam07586, HXXSHH, Protein of unknown function (DUF1552)	NA|693aa|down_6|NZ_CP042467.1_2841435_2843514_-	pfam07631, PSD4, Protein of unknown function (DUF1592)	NA|453aa|down_7|NZ_CP042467.1_2843729_2845088_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|390aa|down_8|NZ_CP042467.1_2845119_2846289_-	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|394aa|down_9|NZ_CP042467.1_2846231_2847413_-	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins
GCF_007993755.1_ASM799375v1	NZ_CP042467	Bradymonadales bacterium V1718 chromosome, complete genome	5	4654848-4662978	5,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8u1,cas7,csb2gr5,cas2,cas1	csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	Unclear	GCTTCAATGGGGCCGCATCCATGCGGATGCGGAGGG,GCTTCAATGGGGCCGCATCCATGCGGATGCGGAGGG,GCTTCAATGGGGCCGCATCCATGCGGATGCGGAGGG	36,36,36	0	0	NA	NA	NA:NA:NA	110,110,109	110	Unclear	csa3,WYL,DEDDh,DinG,cas3,cas8u1,cas7,csb2gr5,cas2,cas1	NA|149aa|up_8|NZ_CP042467.1_4644127_4644574_-,NA|152aa|up_7|NZ_CP042467.1_4644601_4645057_-,NA|82aa|up_1|NZ_CP042467.1_4654243_4654489_+,NA|159aa|down_4|NZ_CP042467.1_4669732_4670209_+,NA|307aa|down_5|NZ_CP042467.1_4670397_4671318_+,NA|542aa|down_7|NZ_CP042467.1_4673028_4674654_-,NA|396aa|down_8|NZ_CP042467.1_4674690_4675878_-	NA|385aa|up_9|NZ_CP042467.1_4642949_4644104_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|149aa|up_8|NZ_CP042467.1_4644127_4644574_-	NA	NA|152aa|up_7|NZ_CP042467.1_4644601_4645057_-	NA	NA|538aa|up_6|NZ_CP042467.1_4645492_4647106_+	TIGR04141, conserved_hypothetical_protein, sporadically distributed protein, TIGR04141 family	cas3|781aa|up_5|NZ_CP042467.1_4647241_4649584_+	cd09696, Cas3_I, CRISPR/Cas system-associated protein Cas3; Distinct Cas3 family with HD domain fused to C-termus of Helicase domain	cas8u1|703aa|up_4|NZ_CP042467.1_4649576_4651685_+	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc	cas7|314aa|up_3|NZ_CP042467.1_4651697_4652639_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|523aa|up_2|NZ_CP042467.1_4652642_4654211_+	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	NA|82aa|up_1|NZ_CP042467.1_4654243_4654489_+	NA	NA|140aa|up_0|NZ_CP042467.1_4654412_4654832_+	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	cas2|101aa|down_0|NZ_CP042467.1_4663168_4663471_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|544aa|down_1|NZ_CP042467.1_4663467_4665099_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|887aa|down_2|NZ_CP042467.1_4665500_4668161_-	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	NA|461aa|down_3|NZ_CP042467.1_4668217_4669600_-	pfam00656, Peptidase_C14, Caspase domain	NA|159aa|down_4|NZ_CP042467.1_4669732_4670209_+	NA	NA|307aa|down_5|NZ_CP042467.1_4670397_4671318_+	NA	NA|558aa|down_6|NZ_CP042467.1_4671314_4672988_-	PRK05326, PRK05326, potassium/proton antiporter	NA|542aa|down_7|NZ_CP042467.1_4673028_4674654_-	NA	NA|396aa|down_8|NZ_CP042467.1_4674690_4675878_-	NA	NA|432aa|down_9|NZ_CP042467.1_4676121_4677417_+	pfam08486, SpoIID, Stage II sporulation protein
