The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP019823	Leptotrichia hofstadii strain JCM16775	2548198	354226	439772	2548198	terminase,tail,portal,plate,tRNA,protease,capsid	Bacteriophage(14.29%)	114	NA	NA
WP_026745253.1|354226_356263_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_026745254.1|356622_357726_+	OmpA family protein	NA	NA	NA	NA	NA
WP_026745255.1|357948_358242_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_026745256.1|358307_360110_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_006805774.1|360279_361218_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_026745257.1|361817_363146_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_036087473.1|363359_364604_+	transcription termination factor Rho	NA	NA	NA	NA	NA
WP_026745259.1|364628_364910_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_026745260.1|365595_366951_-	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	27.0	1.4e-26
WP_026745261.1|367022_367232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745262.1|367210_367453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051254435.1|367503_368010_-	siphovirus Gp157 family protein	NA	NA	NA	NA	NA
WP_146967789.1|368028_368409_-	single-stranded DNA-binding protein	NA	M5ABV5	Bacillus_phage	46.2	1.1e-18
WP_172966420.1|368412_368808_-	ERF family protein	NA	NA	NA	NA	NA
WP_146967794.1|368803_369007_-	ERF family protein	NA	A0A0A7RVW0	Clostridium_phage	63.3	8.6e-10
WP_036087392.1|368975_369134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745265.1|369133_369313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162141756.1|369303_369528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169718703.1|369677_369824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745266.1|369835_370150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036087399.1|370341_370767_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_036087401.1|370783_371209_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_026745268.1|371277_372099_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_051254437.1|372120_372417_+	STAS-like domain-containing protein	NA	NA	NA	NA	NA
WP_026745269.1|372385_372958_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_051254438.1|373059_374022_+	DUF4352 domain-containing protein	NA	NA	NA	NA	NA
WP_026745270.1|374523_375213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745271.1|375382_375766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745272.1|375837_376155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051254439.1|376243_377065_+	conserved phage C-terminal domain-containing protein	NA	A0A0M3LS90	Mannheimia_phage	61.3	1.4e-34
WP_026745273.1|377045_377720_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_026745274.1|377812_378346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154669745.1|378387_378558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081690266.1|378559_378742_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_081690271.1|378802_379225_+	nucleoside triphosphate pyrophosphohydrolase family protein	NA	Q5G7N4	Listonella_phage	37.5	1.2e-08
WP_051254442.1|379241_379856_+	ORF6C domain-containing protein	NA	A0A288WFT2	Bacillus_phage	37.1	6.2e-19
WP_026745276.1|379975_381823_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_154669746.1|381882_382059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745277.1|382025_382742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745278.1|382743_382953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745279.1|383057_383279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745280.1|383327_383564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745281.1|383600_383903_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745282.1|384009_384210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745283.1|384306_384606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745284.1|384773_385343_+	hypothetical protein	NA	A0A2K9V2Q9	Faecalibacterium_phage	24.0	5.6e-06
WP_026745285.1|385275_387156_+|terminase	phage terminase large subunit family protein	terminase	A0A2K9V3X4	Faecalibacterium_phage	45.6	3.6e-150
WP_018450293.1|387156_387387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745286.1|387407_388961_+|portal	phage portal protein	portal	A0A0C5AJ48	Bacteriophage	47.9	6.2e-132
WP_026745287.1|388920_389991_+|protease	Clp protease ClpP	protease	A0A067ZG37	Vibrio_phage	39.8	2.5e-55
WP_006803895.1|389991_390327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745288.1|390326_391340_+|capsid	major capsid protein	capsid	A0A0C5ABI0	Bacteriophage	33.8	1.1e-39
WP_026745289.1|391349_391565_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745290.1|391574_391904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745291.1|391916_392468_+|tail	phage tail protein	tail	A0A067ZG41	Vibrio_phage	33.3	2.5e-19
WP_172966408.1|392471_392930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745293.1|392929_393169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745294.1|393168_394614_+	hypothetical protein	NA	A0A0E3U251	Fusobacterium_phage	33.3	6.5e-59
WP_018450282.1|394625_395153_+|tail	phage major tail tube protein	tail	A0A0E3Y6F4	Fusobacterium_phage	25.3	2.3e-06
WP_026745295.1|395163_395496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745296.1|395690_398756_+|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	36.6	1.3e-56
WP_026745297.1|398755_398977_+|tail	tail protein X	tail	NA	NA	NA	NA
WP_026745298.1|398979_399834_+	hypothetical protein	NA	A0A0C5AJ59	Bacteriophage	29.9	6.8e-24
WP_051254443.1|399843_400413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745299.1|400545_401139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745300.1|401302_401752_+|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_026745301.1|401751_402282_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_026745302.1|402265_402580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745303.1|402572_403691_+|plate	baseplate J/gp47 family protein	plate	A0A0C5AEG2	Bacteriophage	35.0	4.6e-52
WP_026745304.1|403687_404326_+|tail	phage tail protein I	tail	A0A088FVH1	Escherichia_phage	35.1	1.0e-08
WP_026745305.1|405352_406060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745306.1|406070_406547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154669747.1|406549_406702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146967796.1|406703_407693_+	M15 family metallopeptidase	NA	A0A0E3Y6B0	Fusobacterium_phage	46.3	1.2e-27
WP_006803927.1|407842_408169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146967798.1|408191_408551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146967801.1|408490_408862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745309.1|409061_409523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745310.1|409537_410041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745311.1|410046_410457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745312.1|410815_411568_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_026745313.1|411714_412185_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_026745314.1|412435_412672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745315.1|412814_413501_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_026745316.1|414339_415350_+	heat-inducible transcription repressor HrcA	NA	NA	NA	NA	NA
WP_026745317.1|415374_415962_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_026745318.1|416027_417854_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.2	6.6e-141
WP_026745319.1|417988_418240_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A9D9X7	Lactobacillus_prophage	46.5	7.1e-06
WP_026745320.1|418233_418563_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A9D9Y1	Lactobacillus_prophage	39.4	3.6e-13
WP_026745321.1|418670_419552_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_026745322.1|419748_420237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006805793.1|420319_421492_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.0	3.0e-22
WP_006805794.1|421617_422112_-	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_026745323.1|422727_423048_+	putative heavy metal-binding protein	NA	NA	NA	NA	NA
WP_026745324.1|423113_424133_+	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.1	2.8e-16
WP_026745325.1|424154_424400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081690267.1|424403_425270_+	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_026745327.1|425295_425892_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_026745328.1|425930_426482_+	DUF2262 domain-containing protein	NA	NA	NA	NA	NA
WP_026745329.1|426585_427677_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_051254444.1|427773_428550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745330.1|428566_429103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745331.1|429206_429737_+	DUF2262 domain-containing protein	NA	NA	NA	NA	NA
WP_026745332.1|429776_431075_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_026745333.1|431235_431856_+	Type 1 glutamine amidotransferase-like domain-containing protein	NA	NA	NA	NA	NA
WP_026745334.1|431883_432981_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	38.2	8.4e-59
WP_026745335.1|433010_433988_+	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA	NA
WP_006805810.1|434058_434532_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745336.1|434554_435187_-	RNase H1/viroplasmin domain-containing protein	NA	NA	NA	NA	NA
WP_026745337.1|435208_435919_-	3-oxoacyl-ACP reductase FabG	NA	A0A0N9R355	Chrysochromulina_ericina_virus	28.3	2.6e-16
WP_081690272.1|435984_436380_-	septal ring lytic transglycosylase RlpA family protein	NA	H2BCY4	Synechococcus_phage	55.6	1.8e-19
WP_026745339.1|436619_437474_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_006805817.1|437488_437773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026745340.1|438047_439772_-|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	31.9	2.9e-74
>prophage 2
NZ_AP019823	Leptotrichia hofstadii strain JCM16775	2548198	710833	715596	2548198	transposase	Lactococcus_phage(16.67%)	8	NA	NA
WP_026745652.1|710833_711295_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	2.0e-17
WP_026745653.1|711787_712120_-	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	34.8	5.9e-08
WP_051254465.1|712142_712535_-	helix-turn-helix transcriptional regulator	NA	A0A0A7RTR3	Clostridium_phage	26.2	2.5e-05
WP_026745655.1|712786_712987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026745656.1|713050_713818_+	helix-turn-helix domain-containing protein	NA	B5TRA7	Bacteroides_phage	45.5	2.1e-16
WP_081690284.1|713738_714512_+	ATP-binding protein	NA	F7V9D6	Lactobacillus_virus	26.7	8.4e-13
WP_081690285.1|714514_714679_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_026745658.1|714807_715596_+	ParA family protein	NA	H7BUL8	unidentified_phage	25.4	4.4e-09
>prophage 3
NZ_AP019823	Leptotrichia hofstadii strain JCM16775	2548198	1541699	1553477	2548198		Streptococcus_phage(33.33%)	11	NA	NA
WP_051254488.1|1541699_1545209_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	51.7	7.2e-11
WP_026746132.1|1545285_1545825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026746131.1|1545812_1546190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026746130.1|1546364_1546529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036087903.1|1546548_1546830_-	type II toxin-antitoxin system HicB family antitoxin	NA	M1PG28	Streptococcus_phage	40.2	2.3e-13
WP_021743830.1|1546873_1547056_-	type II toxin-antitoxin system HicA family toxin	NA	A0A0R6PJD4	Moraxella_phage	60.0	6.1e-15
WP_026746129.1|1547134_1548028_-	homoserine kinase	NA	NA	NA	NA	NA
WP_026746128.1|1548158_1549751_-	phosphoglycerate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	30.8	5.7e-24
WP_026746127.1|1550521_1551106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006803948.1|1551778_1552324_+	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	44.3	1.1e-22
WP_026746126.1|1552583_1553477_+	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	27.1	3.8e-09
