assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007980285.1_ASM798028v1	NZ_CP017530	Mannheimia haemolytica strain 1532 chromosome, complete genome	1	1240393-1241627	1,1,1	CRISPRCasFinder,PILER-CR,CRT	no	cas3,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2	PD-DExK,cas3,DEDDh,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,RT	Type I-U,Type I-C, Type I-U?	CCAGCCACCTACGCGTGGCTGCGAATTGAAAC,CAGCCACCTACGCGTGGCTGCGAATTGAAAC,CAGCCACCTACGCGTGGCTGNGAATTGAAAC	32,31,31	10	10	1240493-1240526|1240559-1240593|1240626-1240659|1240692-1240727|1240760-1240794|1240827-1240860|1241160-1241193|1241360-1241396|1240559-1240594|1240692-1240728	NZ_CP017530.1_2632139-2632106|NZ_CP017530.1_1306622-1306656|NZ_CP017530.1_1618323-1618356|NZ_CP017530.1_1544673-1544638|NZ_CP017530.1_1545273-1545239|NZ_CP017530.1_1545022-1544989|NZ_CP017530.1_1314229-1314196|NZ_CP017530.1_1594864-1594900|NZ_CP017530.1_1306622-1306657|NZ_CP017530.1_1544673-1544637	NA:NA:NA	17,17,18	18	TypeI-C,TypeI-U,TypeI-U?	PD-DExK,cas3,DEDDh,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,RT	NA|154aa|up_8|NZ_CP017530.1_1231013_1231475_+,NA|307aa|up_3|NZ_CP017530.1_1237511_1238432_+,NA|98aa|up_2|NZ_CP017530.1_1238432_1238726_+,NA	c2c9_V-U4|379aa|up_9|NZ_CP017530.1_1229718_1230855_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|154aa|up_8|NZ_CP017530.1_1231013_1231475_+	NA	cas5|226aa|up_7|NZ_CP017530.1_1233457_1234135_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|594aa|up_6|NZ_CP017530.1_1234156_1235938_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|288aa|up_5|NZ_CP017530.1_1235947_1236811_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|225aa|up_4|NZ_CP017530.1_1236810_1237485_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	NA|307aa|up_3|NZ_CP017530.1_1237511_1238432_+	NA	NA|98aa|up_2|NZ_CP017530.1_1238432_1238726_+	NA	cas1|338aa|up_1|NZ_CP017530.1_1238828_1239842_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|98aa|up_0|NZ_CP017530.1_1239908_1240202_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|492aa|down_0|NZ_CP017530.1_1241811_1243287_+	PRK11712, PRK11712, ribonuclease G; Provisional	NA|501aa|down_1|NZ_CP017530.1_1243440_1244943_+	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|358aa|down_2|NZ_CP017530.1_1245020_1246094_-	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|228aa|down_3|NZ_CP017530.1_1246361_1247045_+	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|280aa|down_4|NZ_CP017530.1_1247081_1247921_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|134aa|down_5|NZ_CP017530.1_1247990_1248392_-	PRK10328, PRK10328, DNA-binding protein StpA	NA|511aa|down_6|NZ_CP017530.1_1248828_1250361_+	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|251aa|down_7|NZ_CP017530.1_1250586_1251339_+	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|397aa|down_8|NZ_CP017530.1_1251350_1252541_+	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|269aa|down_9|NZ_CP017530.1_1252542_1253349_+	TIGR00262, Tryptophan_synthase_alpha_chain, tryptophan synthase, alpha subunit
GCF_007980285.1_ASM798028v1	NZ_CP017530	Mannheimia haemolytica strain 1532 chromosome, complete genome	2	1547660-1547774	2	CRISPRCasFinder	no		PD-DExK,cas3,DEDDh,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,RT	Orphan	GGATAAATCGTAATAATTTCGCCACTGT	28	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas3,DEDDh,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,RT	NA|269aa|up_9|NZ_CP017530.1_1539437_1540244_+,NA|116aa|up_6|NZ_CP017530.1_1542103_1542451_-,NA|93aa|down_5|NZ_CP017530.1_1553720_1553999_+	NA|269aa|up_9|NZ_CP017530.1_1539437_1540244_+	NA	NA|413aa|up_8|NZ_CP017530.1_1540426_1541665_-	PHA02561, D, tail protein; Provisional	NA|146aa|up_7|NZ_CP017530.1_1541664_1542102_-	pfam06995, Phage_P2_GpU, Phage P2 GpU	NA|116aa|up_6|NZ_CP017530.1_1542103_1542451_-	NA	NA|39aa|up_5|NZ_CP017530.1_1542514_1542631_-	pfam06528, Phage_P2_GpE, Phage P2 GpE	NA|105aa|up_4|NZ_CP017530.1_1542654_1542969_-	pfam10109, Phage_TAC_7, Phage tail assembly chaperone proteins, E, or 41 or 14	NA|169aa|up_3|NZ_CP017530.1_1543047_1543554_-	PHA02600, FII, major tail tube protein; Provisional	NA|394aa|up_2|NZ_CP017530.1_1543562_1544744_-	PHA02560, FI, major tail sheath protein; Provisional	NA|81aa|up_1|NZ_CP017530.1_1545121_1545364_-	pfam07087, DUF1353, Protein of unknown function (DUF1353)	NA|760aa|up_0|NZ_CP017530.1_1545364_1547644_-	pfam12571, DUF3751, Phage tail-collar fibre protein	NA|306aa|down_0|NZ_CP017530.1_1548265_1549183_-	PHA02568, J, baseplate assembly protein; Provisional	NA|112aa|down_1|NZ_CP017530.1_1549179_1549515_-	PHA02516, W, baseplate wedge subunit; Provisional	NA|202aa|down_2|NZ_CP017530.1_1549514_1550120_-	pfam04717, Phage_base_V, Type VI secretion system, phage-baseplate injector	NA|96aa|down_3|NZ_CP017530.1_1550248_1550536_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|971aa|down_4|NZ_CP017530.1_1550769_1553682_-	COG3941, COG3941, Mu-like prophage protein [General function prediction only]	NA|93aa|down_5|NZ_CP017530.1_1553720_1553999_+	NA	NA|153aa|down_6|NZ_CP017530.1_1554049_1554508_-	pfam05069, Phage_tail_S, Phage virion morphogenesis family	NA|162aa|down_7|NZ_CP017530.1_1554500_1554986_-	pfam06891, P2_Phage_GpR, P2 phage tail completion protein R (GpR)	NA|74aa|down_8|NZ_CP017530.1_1554982_1555204_-	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|152aa|down_9|NZ_CP017530.1_1555352_1555808_-	TIGR03495, Probable_spanin_inner_membrane_subunit, phage lysis regulatory protein, LysB family
GCF_007980285.1_ASM798028v1	NZ_CP017530	Mannheimia haemolytica strain 1532 chromosome, complete genome	3	1991411-1991485	3	CRISPRCasFinder	no		PD-DExK,cas3,DEDDh,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,RT	Orphan	TTCTGGTGTCTGCCACCGCTAGG	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas3,DEDDh,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,WYL,RT	NA|136aa|up_8|NZ_CP017530.1_1985205_1985613_+,NA|117aa|up_7|NZ_CP017530.1_1985710_1986061_+,NA|121aa|up_6|NZ_CP017530.1_1986151_1986514_+,NA|87aa|up_5|NZ_CP017530.1_1986626_1986887_+,NA|420aa|up_4|NZ_CP017530.1_1986976_1988236_+,NA|88aa|up_1|NZ_CP017530.1_1989790_1990054_+,NA|198aa|down_2|NZ_CP017530.1_1993508_1994102_-,NA|288aa|down_3|NZ_CP017530.1_1994225_1995089_-	NA|216aa|up_9|NZ_CP017530.1_1984534_1985182_+	pfam12083, DUF3560, Domain of unknown function (DUF3560)	NA|136aa|up_8|NZ_CP017530.1_1985205_1985613_+	NA	NA|117aa|up_7|NZ_CP017530.1_1985710_1986061_+	NA	NA|121aa|up_6|NZ_CP017530.1_1986151_1986514_+	NA	NA|87aa|up_5|NZ_CP017530.1_1986626_1986887_+	NA	NA|420aa|up_4|NZ_CP017530.1_1986976_1988236_+	NA	NA|279aa|up_3|NZ_CP017530.1_1988177_1989014_-	pfam07514, TraI_2, Putative helicase	NA|155aa|up_2|NZ_CP017530.1_1989117_1989582_-	pfam08401, DUF1738, Domain of unknown function (DUF1738)	NA|88aa|up_1|NZ_CP017530.1_1989790_1990054_+	NA	NA|347aa|up_0|NZ_CP017530.1_1990157_1991198_+	pfam00665, rve, Integrase core domain	NA|414aa|down_0|NZ_CP017530.1_1991601_1992843_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|68aa|down_1|NZ_CP017530.1_1992842_1993046_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|198aa|down_2|NZ_CP017530.1_1993508_1994102_-	NA	NA|288aa|down_3|NZ_CP017530.1_1994225_1995089_-	NA	NA|250aa|down_4|NZ_CP017530.1_1995260_1996010_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|162aa|down_5|NZ_CP017530.1_1996011_1996497_-	cd04336, YeaK, YeaK is an uncharacterized Echerichia coli protein with a YbaK-like domain of unknown function	NA|182aa|down_6|NZ_CP017530.1_1996560_1997106_-	PRK04946, PRK04946, endonuclease SmrB	NA|315aa|down_7|NZ_CP017530.1_1997198_1998143_+	PRK11805, PRK11805, 50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA|298aa|down_8|NZ_CP017530.1_1998226_1999120_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|154aa|down_9|NZ_CP017530.1_1999132_1999594_-	pfam14534, DUF4440, Domain of unknown function (DUF4440)
