assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007954405.1_ASM795440v1	NZ_CP042344	Comamonas sp. NLF-7-7 strain NLF 7-7 chromosome, complete genome	1	2309586-2309706	1	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	Orphan	GCTTCGACGATGCACGGATTTAGCCGGCTAAAT	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	NA,NA|138aa|down_5|NZ_CP042344.1_2314935_2315349_+,NA|563aa|down_8|NZ_CP042344.1_2319587_2321276_+,NA|249aa|down_9|NZ_CP042344.1_2321868_2322615_-	NA|273aa|up_9|NZ_CP042344.1_2298866_2299685_-	pfam06167, Peptidase_M90, Glucose-regulated metallo-peptidase M90	NA|260aa|up_8|NZ_CP042344.1_2299684_2300464_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|176aa|up_7|NZ_CP042344.1_2300466_2300994_-	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|191aa|up_6|NZ_CP042344.1_2301003_2301576_-	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|432aa|up_5|NZ_CP042344.1_2301572_2302868_-	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|323aa|up_4|NZ_CP042344.1_2302908_2303877_-	sd00006, TPR, Tetratricopeptide repeat	NA|459aa|up_3|NZ_CP042344.1_2304003_2305380_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|326aa|up_2|NZ_CP042344.1_2305535_2306513_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|320aa|up_1|NZ_CP042344.1_2306564_2307524_+	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|420aa|up_0|NZ_CP042344.1_2307579_2308839_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|124aa|down_0|NZ_CP042344.1_2310238_2310610_+	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system	NA|106aa|down_1|NZ_CP042344.1_2310606_2310924_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|74aa|down_2|NZ_CP042344.1_2312029_2312251_+	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|264aa|down_3|NZ_CP042344.1_2312466_2313258_+	pfam03090, Replicase, Replicase family	NA|422aa|down_4|NZ_CP042344.1_2313654_2314920_+	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|138aa|down_5|NZ_CP042344.1_2314935_2315349_+	NA	NA|815aa|down_6|NZ_CP042344.1_2315974_2318419_+	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|328aa|down_7|NZ_CP042344.1_2318520_2319504_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|563aa|down_8|NZ_CP042344.1_2319587_2321276_+	NA	NA|249aa|down_9|NZ_CP042344.1_2321868_2322615_-	NA
GCF_007954405.1_ASM795440v1	NZ_CP042344	Comamonas sp. NLF-7-7 strain NLF 7-7 chromosome, complete genome	2	2482980-2483081	2	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	Orphan	CGCTGCTGCCCGCAGCAGCGCGGCCT	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	NA,NA	NA|201aa|up_9|NZ_CP042344.1_2472359_2472962_+	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|637aa|up_8|NZ_CP042344.1_2473030_2474941_+	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)	NA|207aa|up_7|NZ_CP042344.1_2474965_2475586_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|238aa|up_6|NZ_CP042344.1_2475582_2476296_-	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional	NA|282aa|up_5|NZ_CP042344.1_2476470_2477316_-	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|294aa|up_4|NZ_CP042344.1_2477330_2478212_-	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|384aa|up_3|NZ_CP042344.1_2478326_2479478_-	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|547aa|up_2|NZ_CP042344.1_2479654_2481295_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|97aa|up_1|NZ_CP042344.1_2481375_2481666_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|347aa|up_0|NZ_CP042344.1_2481852_2482893_-	PRK05379, PRK05379, bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	NA|281aa|down_0|NZ_CP042344.1_2484370_2485213_+	PRK08905, PRK08905, lysophospholipid acyltransferase family protein	NA|290aa|down_1|NZ_CP042344.1_2485212_2486082_+	PRK06946, PRK06946, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|195aa|down_2|NZ_CP042344.1_2486140_2486725_+	COG1268, BioY, Uncharacterized conserved protein [General function prediction only]	NA|242aa|down_3|NZ_CP042344.1_2486734_2487460_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|207aa|down_4|NZ_CP042344.1_2487535_2488156_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|331aa|down_5|NZ_CP042344.1_2488279_2489272_+	PRK05363, PRK05363, protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA|217aa|down_6|NZ_CP042344.1_2489271_2489922_+	PRK05419, PRK05419, protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA|432aa|down_7|NZ_CP042344.1_2489963_2491259_-	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|69aa|down_8|NZ_CP042344.1_2491255_2491462_-	pfam13627, LPAM_2, Prokaryotic lipoprotein-attachment site	NA|791aa|down_9|NZ_CP042344.1_2491484_2493857_-	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]
GCF_007954405.1_ASM795440v1	NZ_CP042344	Comamonas sp. NLF-7-7 strain NLF 7-7 chromosome, complete genome	3	2670153-2670263	3	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	Orphan	GCAGGTGCTGGTGCGCCACCACTACCTGAGCCTGGACC	38	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	NA|209aa|up_2|NZ_CP042344.1_2667491_2668118_+,NA|158aa|down_4|NZ_CP042344.1_2675360_2675834_+	NA|289aa|up_9|NZ_CP042344.1_2658184_2659051_-	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|262aa|up_8|NZ_CP042344.1_2659140_2659926_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|263aa|up_7|NZ_CP042344.1_2659967_2660756_+	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase	NA|437aa|up_6|NZ_CP042344.1_2660950_2662261_+	PRK01490, tig, trigger factor; Provisional	NA|203aa|up_5|NZ_CP042344.1_2662362_2662971_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|422aa|up_4|NZ_CP042344.1_2663068_2664334_+	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|809aa|up_3|NZ_CP042344.1_2664442_2666869_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|209aa|up_2|NZ_CP042344.1_2667491_2668118_+	NA	NA|301aa|up_1|NZ_CP042344.1_2668105_2669008_-	PRK00865, PRK00865, glutamate racemase; Provisional	NA|265aa|up_0|NZ_CP042344.1_2669137_2669932_+	PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional	NA|301aa|down_0|NZ_CP042344.1_2671149_2672052_+	PRK06194, PRK06194, hypothetical protein; Provisional	NA|295aa|down_1|NZ_CP042344.1_2672082_2672967_+	pfam07264, EI24, Etoposide-induced protein 2	NA|279aa|down_2|NZ_CP042344.1_2672963_2673800_+	COG1058, CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]	NA|472aa|down_3|NZ_CP042344.1_2673864_2675280_+	PRK09469, glnA, glutamate--ammonia ligase	NA|158aa|down_4|NZ_CP042344.1_2675360_2675834_+	NA	NA|154aa|down_5|NZ_CP042344.1_2675853_2676315_-	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|260aa|down_6|NZ_CP042344.1_2676385_2677165_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|90aa|down_7|NZ_CP042344.1_2677342_2677612_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|96aa|down_8|NZ_CP042344.1_2677797_2678085_-	pfam10038, DUF2274, Protein of unknown function (DUF2274)	NA|423aa|down_9|NZ_CP042344.1_2678081_2679350_-	COG2948, VirB10, Type IV secretory pathway, VirB10 components [Intracellular trafficking and secretion]
GCF_007954405.1_ASM795440v1	NZ_CP042344	Comamonas sp. NLF-7-7 strain NLF 7-7 chromosome, complete genome	4	3172311-3172396	4	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	Orphan	TGGGAGAGGGCCGGGGTGAGGGC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,csa3,RT,PD-DExK,DinG	NA|328aa|up_9|NZ_CP042344.1_3164637_3165621_+,NA|185aa|up_8|NZ_CP042344.1_3165634_3166189_+,NA|120aa|up_3|NZ_CP042344.1_3168065_3168425_+,NA|105aa|up_2|NZ_CP042344.1_3168421_3168736_+,NA|137aa|down_3|NZ_CP042344.1_3175989_3176400_+,NA|140aa|down_7|NZ_CP042344.1_3178346_3178766_+,NA|315aa|down_9|NZ_CP042344.1_3179013_3179958_+	NA|328aa|up_9|NZ_CP042344.1_3164637_3165621_+	NA	NA|185aa|up_8|NZ_CP042344.1_3165634_3166189_+	NA	NA|128aa|up_7|NZ_CP042344.1_3166292_3166676_+	pfam13272, Holin_2-3, Putative 2/3 transmembrane domain holin	NA|210aa|up_6|NZ_CP042344.1_3166678_3167308_+	cd13403, MLTF-like, membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins	NA|145aa|up_5|NZ_CP042344.1_3167304_3167739_+	pfam04375, HemX, HemX, putative uroporphyrinogen-III C-methyltransferase	NA|90aa|up_4|NZ_CP042344.1_3167799_3168069_+	PRK11019, PRK11019, DksA/TraR family C4-type zinc finger protein	NA|120aa|up_3|NZ_CP042344.1_3168065_3168425_+	NA	NA|105aa|up_2|NZ_CP042344.1_3168421_3168736_+	NA	NA|197aa|up_1|NZ_CP042344.1_3168745_3169336_+	pfam11985, DUF3486, Protein of unknown function (DUF3486)	NA|558aa|up_0|NZ_CP042344.1_3169335_3171009_+	COG4373, COG4373, Mu-like prophage FluMu protein gp28 [General function prediction only]	NA|413aa|down_0|NZ_CP042344.1_3172750_3173989_+	pfam18810, PBECR2, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	NA|187aa|down_1|NZ_CP042344.1_3174204_3174765_+	pfam05069, Phage_tail_S, Phage virion morphogenesis family	NA|384aa|down_2|NZ_CP042344.1_3174813_3175965_+	pfam10123, Mu-like_Pro, Mu-like prophage I protein	NA|137aa|down_3|NZ_CP042344.1_3175989_3176400_+	NA	NA|298aa|down_4|NZ_CP042344.1_3176439_3177333_+	pfam10124, Mu-like_gpT, Mu-like prophage major head subunit gpT	NA|96aa|down_5|NZ_CP042344.1_3177362_3177650_+	pfam17891, FluMu_N, Mu-like prophage FluMu N-terminal domain	NA|179aa|down_6|NZ_CP042344.1_3177797_3178334_+	pfam07030, DUF1320, Protein of unknown function (DUF1320)	NA|140aa|down_7|NZ_CP042344.1_3178346_3178766_+	NA	NA|78aa|down_8|NZ_CP042344.1_3178783_3179017_+	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein]	NA|315aa|down_9|NZ_CP042344.1_3179013_3179958_+	NA
