assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007843715.1_ASM784371v1	NZ_CP024947	Helicobacter pylori strain J182 chromosome, complete genome	1	555466-555605	1	CRISPRCasFinder	no		DEDDh,cas3,cas2	Orphan	AGGCTCTCTAGCGTTACTGAAGAAATCATTTCAAAAAAACAAGAAGAATT	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,cas2	NA|102aa|up_0|NZ_CP024947.1_554777_555083_+,NA|79aa|down_9|NZ_CP024947.1_568763_569000_+	NA|181aa|up_9|NZ_CP024947.1_548158_548701_+	TIGR03585, PseH, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA|313aa|up_8|NZ_CP024947.1_548633_549572_-	COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]	NA|261aa|up_7|NZ_CP024947.1_549568_550351_-	PRK13980, PRK13980, NAD synthetase; Provisional	NA|331aa|up_6|NZ_CP024947.1_550599_551592_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|269aa|up_5|NZ_CP024947.1_551610_552417_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|78aa|up_4|NZ_CP024947.1_552413_552647_+	TIGR01215, Cell_division_topological_specificity_factor, cell division topological specificity factor MinE	NA|271aa|up_3|NZ_CP024947.1_552646_553459_+	TIGR00732, Protein_smf, DNA protecting protein DprA	NA|135aa|up_2|NZ_CP024947.1_553455_553860_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|224aa|up_1|NZ_CP024947.1_553991_554663_+	sd00010, SLR, Sel1-like repeat	NA|102aa|up_0|NZ_CP024947.1_554777_555083_+	NA	NA|294aa|down_0|NZ_CP024947.1_555788_556670_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|517aa|down_1|NZ_CP024947.1_556669_558220_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|539aa|down_2|NZ_CP024947.1_558228_559845_-	PRK05380, pyrG, CTP synthetase; Validated	NA|223aa|down_3|NZ_CP024947.1_560104_560773_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|344aa|down_4|NZ_CP024947.1_562535_563567_+	TIGR00207, Flagellar_motor_switch_protein_FliG, flagellar motor switch protein FliG	NA|259aa|down_5|NZ_CP024947.1_563553_564330_+	PRK06669, fliH, flagellar assembly protein H; Validated	NA|619aa|down_6|NZ_CP024947.1_564326_566183_+	TIGR00204, 1-deoxy-D-xylulose-5-phosphate_synthase, 1-deoxy-D-xylulose-5-phosphate synthase	NA|603aa|down_7|NZ_CP024947.1_566179_567988_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|253aa|down_8|NZ_CP024947.1_568002_568761_+	pfam13020, DUF3883, Domain of unknown function (DUF3883)	NA|79aa|down_9|NZ_CP024947.1_568763_569000_+	NA
GCF_007843715.1_ASM784371v1	NZ_CP024947	Helicobacter pylori strain J182 chromosome, complete genome	2	1157403-1157550	1,2	PILER-CR,CRISPRCasFinder	no		DEDDh,cas3,cas2	Orphan	CTTCAATCAAGGGACTTATAACTTTAATAACAGC,TTCAATCAAGGGACTTATAATTTTAAT	34,27	0	0	NA	NA	I-B:I-B	2,2	2	Orphan	DEDDh,cas3,cas2	NA,NA|220aa|down_8|NZ_CP024947.1_1170216_1170876_+	NA|380aa|up_9|NZ_CP024947.1_1138767_1139907_+	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|676aa|up_8|NZ_CP024947.1_1139910_1141938_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|516aa|up_7|NZ_CP024947.1_1142531_1144079_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|531aa|up_6|NZ_CP024947.1_1144100_1145693_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|515aa|up_5|NZ_CP024947.1_1146511_1148056_-	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|814aa|up_4|NZ_CP024947.1_1148302_1150744_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|144aa|up_3|NZ_CP024947.1_1150920_1151352_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|1086aa|up_2|NZ_CP024947.1_1151356_1154614_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|231aa|up_1|NZ_CP024947.1_1154712_1155405_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|333aa|up_0|NZ_CP024947.1_1155548_1156547_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|368aa|down_0|NZ_CP024947.1_1163802_1164906_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|69aa|down_1|NZ_CP024947.1_1164973_1165180_-	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|194aa|down_2|NZ_CP024947.1_1165307_1165889_+	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|382aa|down_3|NZ_CP024947.1_1165885_1167031_+	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|327aa|down_4|NZ_CP024947.1_1166969_1167950_+	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|181aa|down_5|NZ_CP024947.1_1167950_1168493_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|304aa|down_6|NZ_CP024947.1_1168508_1169420_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|268aa|down_7|NZ_CP024947.1_1169416_1170220_+	COG0496, SurE, Predicted acid phosphatase [General function prediction only]	NA|220aa|down_8|NZ_CP024947.1_1170216_1170876_+	NA	NA|201aa|down_9|NZ_CP024947.1_1170879_1171482_+	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]
