assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007833575.1_ASM783357v1	NZ_CP030072	Klebsiella pneumoniae strain DA12090 chromosome, complete genome	1	1020000-1020128	1	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,WYL,DinG,csa3,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,RT	Unclear	GTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,RT	NA,NA	NA|194aa|up_9|NZ_CP030072.1_1011354_1011936_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|256aa|up_8|NZ_CP030072.1_1012010_1012778_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_7|NZ_CP030072.1_1012748_1013489_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|448aa|up_6|NZ_CP030072.1_1013900_1015244_+	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|413aa|up_5|NZ_CP030072.1_1015247_1016486_+	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|265aa|up_4|NZ_CP030072.1_1016478_1017273_+	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|213aa|up_3|NZ_CP030072.1_1017265_1017904_+	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|199aa|up_2|NZ_CP030072.1_1017910_1018507_+	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|408aa|up_1|NZ_CP030072.1_1018519_1019743_+	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|72aa|up_0|NZ_CP030072.1_1019745_1019961_+	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|287aa|down_0|NZ_CP030072.1_1020183_1021044_-	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|352aa|down_1|NZ_CP030072.1_1021203_1022259_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|151aa|down_2|NZ_CP030072.1_1022261_1022714_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|486aa|down_3|NZ_CP030072.1_1022756_1024214_-	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|153aa|down_4|NZ_CP030072.1_1024471_1024930_+	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|415aa|down_5|NZ_CP030072.1_1025035_1026280_+	PRK05077, frsA, esterase FrsA	NA|133aa|down_6|NZ_CP030072.1_1026337_1026736_+	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|231aa|down_7|NZ_CP030072.1_1026821_1027514_-	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|467aa|down_8|NZ_CP030072.1_1027559_1028960_-	PRK10197, PRK10197, GABA permease	NA|428aa|down_9|NZ_CP030072.1_1029095_1030379_-	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase
GCF_007833575.1_ASM783357v1	NZ_CP030072	Klebsiella pneumoniae strain DA12090 chromosome, complete genome	2	3021147-3022524	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	DEDDh,cas3,WYL,DinG,csa3,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,RT	Type I-E	GAAACACCCCCACGTGCGTGGGGAAGAC,GAAACACCCCCACGTGCGTGGGGAAGACN,GAAACACCCCCACGTGCGTGGGGAAGAC	28,29,28	2	2	3021244-3021276|3022464-3022496	NZ_CP030071.1_105280-105312|NZ_CP030072.1_5125674-5125706	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	22,22,21	22	TypeI-E	DEDDh,cas3,WYL,DinG,csa3,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,RT	NA,NA|60aa|down_8|NZ_CP030072.1_3030919_3031099_-	NA|77aa|up_9|NZ_CP030072.1_3011896_3012127_-	COG3114, CcmD, Heme exporter protein D [Intracellular trafficking and secretion]	NA|246aa|up_8|NZ_CP030072.1_3012123_3012861_-	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC	NA|220aa|up_7|NZ_CP030072.1_3012910_3013570_-	TIGR01190, Heme_exporter_protein_B, heme exporter protein CcmB	NA|208aa|up_6|NZ_CP030072.1_3013566_3014190_-	PRK13538, PRK13538, cytochrome c biogenesis heme-transporting ATPase CcmA	NA|446aa|up_5|NZ_CP030072.1_3014273_3015611_-	pfam00034, Cytochrom_C, Cytochrome c	NA|595aa|up_4|NZ_CP030072.1_3015624_3017409_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|251aa|up_3|NZ_CP030072.1_3017411_3018164_-	pfam13618, Gluconate_2-dh3, Gluconate 2-dehydrogenase subunit 3	NA|124aa|up_2|NZ_CP030072.1_3018668_3019040_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|228aa|up_1|NZ_CP030072.1_3019100_3019784_-	pfam16277, DUF4926, Domain of unknown function (DUF4926)	NA|372aa|up_0|NZ_CP030072.1_3019794_3020910_-	PHA02053, PHA02053, hypothetical protein	cas2|96aa|down_0|NZ_CP030072.1_3022571_3022859_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|292aa|down_1|NZ_CP030072.1_3022836_3023712_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|232aa|down_2|NZ_CP030072.1_3023711_3024407_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|down_3|NZ_CP030072.1_3024440_3025475_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|216aa|down_4|NZ_CP030072.1_3025504_3026152_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cse2gr11|189aa|down_5|NZ_CP030072.1_3026144_3026711_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|508aa|down_6|NZ_CP030072.1_3026722_3028246_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|872aa|down_7|NZ_CP030072.1_3028249_3030865_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|60aa|down_8|NZ_CP030072.1_3030919_3031099_-	NA	NA|357aa|down_9|NZ_CP030072.1_3032107_3033178_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
GCF_007833575.1_ASM783357v1	NZ_CP030072	Klebsiella pneumoniae strain DA12090 chromosome, complete genome	3	3031277-3031855	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,cas3	DEDDh,cas3,WYL,DinG,csa3,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,RT	Type I-E	AGAAACACCCCCACGCGTGTGGGGAAGAC,GAAACACCCCCACGCGTGTGGGGAAGAC,GAAACACCCCCACGCGTGTGGGGAAGAC	29,28,28	2	2	3031367-3031398|3031367-3031399	NZ_CP030071.1_177142-177111|NZ_CP030071.1_177142-177110	I-E,II-B:I-E,II-B:I-E,II-B	9,9,6	9	TypeI-E	DEDDh,cas3,WYL,DinG,csa3,cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e,RT	NA|60aa|up_0|NZ_CP030072.1_3030919_3031099_-,NA|79aa|down_3|NZ_CP030072.1_3036120_3036357_-	NA|372aa|up_9|NZ_CP030072.1_3019794_3020910_-	PHA02053, PHA02053, hypothetical protein	cas2|96aa|up_8|NZ_CP030072.1_3022571_3022859_-	cd09648, Cas2_I-E, CRISPR/Cas system-associated protein Cas2	cas1|292aa|up_7|NZ_CP030072.1_3022836_3023712_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas5|232aa|up_6|NZ_CP030072.1_3023711_3024407_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|345aa|up_5|NZ_CP030072.1_3024440_3025475_-	pfam09344, Cas_CT1975, CT1975-like protein	cas6e|216aa|up_4|NZ_CP030072.1_3025504_3026152_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cse2gr11|189aa|up_3|NZ_CP030072.1_3026144_3026711_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|508aa|up_2|NZ_CP030072.1_3026722_3028246_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|872aa|up_1|NZ_CP030072.1_3028249_3030865_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|60aa|up_0|NZ_CP030072.1_3030919_3031099_-	NA	NA|357aa|down_0|NZ_CP030072.1_3032107_3033178_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|590aa|down_1|NZ_CP030072.1_3033170_3034940_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|363aa|down_2|NZ_CP030072.1_3035013_3036102_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|79aa|down_3|NZ_CP030072.1_3036120_3036357_-	NA	NA|360aa|down_4|NZ_CP030072.1_3036404_3037484_+	PRK10098, PRK10098, putative dehydrogenase; Provisional	NA|717aa|down_5|NZ_CP030072.1_3037730_3039881_+	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|386aa|down_6|NZ_CP030072.1_3039923_3041081_-	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|400aa|down_7|NZ_CP030072.1_3041376_3042576_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|145aa|down_8|NZ_CP030072.1_3042691_3043126_+	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|411aa|down_9|NZ_CP030072.1_3043691_3044924_+	PRK15403, PRK15403, multidrug efflux MFS transporter MdtM
