The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	717575	725396	2737143		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|717575_718631_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|718630_719317_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|719291_719765_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|720107_720548_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|720827_721412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|721510_722224_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|722227_722647_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|722648_723317_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604515.1|723667_724261_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
WP_145392923.1|724244_725396_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 2
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	737368	752099	2737143		uncultured_Caudovirales_phage(50.0%)	16	NA	NA
WP_000663032.1|737368_738427_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	1.8e-21
WP_000197271.1|738721_739264_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429008.1|739944_740862_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	2.8e-07
WP_031760357.1|740951_741053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|741130_742636_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001788366.1|742701_742947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000930014.1|742976_743477_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_060552756.1|743496_744363_-	DMT family transporter	NA	NA	NA	NA	NA
WP_001790091.1|744747_745014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060552755.1|745163_745562_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	71.2	4.7e-52
WP_000855505.1|745524_747630_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|747747_748719_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|749232_749388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|749426_750398_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245573.1|750384_751341_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|751337_752099_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 3
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	995582	1004055	2737143		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|995582_996065_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000009495.1|996051_997176_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|997179_997884_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|997883_998147_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|998148_998820_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032727.1|998812_1001002_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000483713.1|1000980_1002465_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030823.1|1002457_1003486_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238663.1|1003488_1004055_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	1.0e-28
>prophage 4
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	1055650	1098686	2737143	protease,portal,holin,terminase,tail,head,capsid	Staphylococcus_phage(79.66%)	64	NA	NA
WP_145392938.1|1055650_1056133_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	3.4e-28
WP_000843611.1|1056194_1057334_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000872158.1|1057460_1058018_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_001791487.1|1057929_1058154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000290472.1|1058097_1058271_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_145392939.1|1058387_1059773_-	recombinase family protein	NA	I1W625	Staphylococcus_phage	98.3	4.8e-261
WP_115293054.1|1059826_1060054_-	hypothetical protein	NA	Q9G043	Staphylococcus_virus	100.0	3.0e-11
WP_145392940.1|1060196_1060718_-	hypothetical protein	NA	A0A0H3U494	Staphylococcus_phage	86.1	8.5e-86
WP_061735314.1|1060833_1061379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061735313.1|1061429_1062062_-	helix-turn-helix domain-containing protein	NA	Q4ZB06	Staphylococcus_virus	91.4	4.9e-104
WP_069993619.1|1062215_1062443_+	helix-turn-helix transcriptional regulator	NA	Q4ZB05	Staphylococcus_virus	98.7	6.0e-36
WP_001148617.1|1062465_1063218_+	oxidoreductase	NA	G4KNN1	Staphylococcus_phage	100.0	1.1e-139
WP_070003272.1|1063233_1063377_+	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	95.7	7.4e-16
WP_145392941.1|1063386_1063989_-	hypothetical protein	NA	B7T096	Staphylococcus_virus	95.9	7.0e-100
WP_001285954.1|1064169_1064331_+	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_000291075.1|1064466_1064727_+	DUF1108 family protein	NA	A0A059T5A3	Staphylococcus_phage	100.0	1.2e-43
WP_000802315.1|1064734_1064971_+	hypothetical protein	NA	D2JGJ9	Staphylococcus_phage	100.0	2.7e-39
WP_145392942.1|1064963_1065443_+	siphovirus Gp157 family protein	NA	A0ZS19	Staphylococcus_virus	98.1	3.4e-81
WP_145392943.1|1065442_1066081_+	single-stranded DNA-binding protein	NA	A0A059T7J7	Staphylococcus_phage	98.1	3.1e-114
WP_145392944.1|1066080_1066500_+	single-stranded DNA-binding protein	NA	B7T0A5	Staphylococcus_virus	95.4	1.0e-52
WP_145392945.1|1066513_1067182_+	hypothetical protein	NA	A0A0E3XBQ6	Staphylococcus_phage	96.4	1.1e-122
WP_031913258.1|1067181_1067964_+	AP2 domain-containing protein	NA	A0A2I6PDA5	Staphylococcus_phage	98.0	3.1e-140
WP_145392946.1|1067935_1068745_+	DnaD domain protein	NA	Q8SDW2	Staphylococcus_phage	98.5	1.5e-105
WP_001132243.1|1068744_1069101_+	hypothetical protein	NA	M9NS37	Staphylococcus_phage	100.0	8.2e-64
WP_031911826.1|1069097_1070339_+	AAA family ATPase	NA	Q4ZA50	Staphylococcus_virus	99.5	4.4e-229
WP_070021241.1|1070335_1070551_+	hypothetical protein	NA	A9CR72	Staphylococcus_phage	95.8	2.0e-33
WP_001123688.1|1070553_1070775_+	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
WP_000049784.1|1070785_1071190_+	DUF1064 domain-containing protein	NA	A7TWN5	Staphylococcus_phage	100.0	7.1e-72
WP_145392948.1|1071194_1071380_+	DUF3113 family protein	NA	A0A0H4IPE3	Staphylococcus_phage	96.7	3.5e-26
WP_000772917.1|1071380_1071638_+	helix-turn-helix transcriptional regulator	NA	Q9MBR5	Staphylococcus_prophage	100.0	5.4e-41
WP_145392950.1|1071649_1072006_+	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	96.6	4.6e-59
WP_145392951.1|1072009_1072252_+	hypothetical protein	NA	A0A2I6PF06	Staphylococcus_phage	92.5	8.9e-38
WP_145392953.1|1072266_1072551_+	hypothetical protein	NA	A0A2I6PDI3	Staphylococcus_phage	94.6	6.3e-43
WP_145392955.1|1072543_1072792_+	DUF1024 family protein	NA	A0A2K9VBU0	Staphylococcus_phage	97.5	4.5e-37
WP_145392957.1|1072784_1073318_+	dUTP pyrophosphatase	NA	A1KX16	Staphylococcus_virus	91.5	1.3e-86
WP_145392959.1|1073354_1073561_+	DUF1381 domain-containing protein	NA	A0A2I6PDB6	Staphylococcus_phage	86.8	3.3e-25
WP_063815502.1|1073557_1073731_+	transcriptional regulator	NA	A0A0H3U4U1	Staphylococcus_phage	98.2	2.9e-22
WP_046594621.1|1073730_1073931_+	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	98.5	2.4e-28
WP_145392961.1|1073953_1074415_+	hypothetical protein	NA	R9QT84	Staphylococcus_phage	98.0	3.6e-72
WP_046594624.1|1074529_1074982_+	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	86.0	3.1e-68
WP_078103664.1|1074997_1075342_+	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	93.9	1.3e-61
WP_000919030.1|1075470_1075941_+|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	93.5	2.6e-78
WP_145392963.1|1075940_1077635_+|terminase	terminase	terminase	D2JLE4	Staphylococcus_phage	90.1	6.0e-298
WP_145392965.1|1077579_1077852_+	hypothetical protein	NA	A7TWC1	Staphylococcus_phage	75.3	2.7e-22
WP_078102454.1|1077914_1079129_+|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	87.9	2.7e-199
WP_044132398.1|1079103_1079688_+|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	95.9	1.0e-103
WP_044132392.1|1079775_1081011_+|capsid	phage major capsid protein	capsid	Q8SDK8	Staphylococcus_phage	79.5	1.0e-169
WP_001252099.1|1081047_1081206_+	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_001177485.1|1081214_1081547_+|head,tail	phage head-tail adapter protein	head,tail	D2JLF0	Staphylococcus_phage	98.2	1.2e-56
WP_025174659.1|1081533_1081869_+|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	98.2	7.4e-59
WP_000501244.1|1081868_1082246_+	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_000611451.1|1082242_1082623_+	hypothetical protein	NA	Q9MBP5	Staphylococcus_prophage	100.0	3.4e-68
WP_000570651.1|1082623_1083577_+|tail	phage tail protein	tail	A7TWD0	Staphylococcus_phage	99.7	1.8e-174
WP_000442601.1|1083641_1084088_+	hypothetical protein	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
WP_000571956.1|1084147_1084270_+	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	97.5	2.6e-14
WP_109183285.1|1084326_1088976_+|tail	phage tail tape measure protein	tail	A0A1V0E5H1	Staphylococcus_phage	97.7	0.0e+00
WP_145392967.1|1088975_1090466_+|tail	phage tail protein	tail	Q9MBP0	Staphylococcus_prophage	99.2	1.4e-295
WP_145392969.1|1090481_1094051_+	hypothetical protein	NA	W5R8M1	Staphylococcus_phage	94.5	0.0e+00
WP_060552605.1|1094037_1094190_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	96.0	9.9e-19
WP_060552604.1|1094241_1094529_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	94.7	3.2e-42
WP_060552603.1|1094585_1094882_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	99.0	6.4e-46
WP_060552602.1|1095431_1095734_+|holin	phage holin	holin	A0A2I6PET6	Staphylococcus_phage	93.0	1.5e-45
WP_060552601.1|1095744_1097199_+	CHAP domain-containing protein	NA	A0A0N6WMR3	Staphylococcus_phage	96.1	2.2e-280
WP_145392971.1|1098437_1098686_+	hypothetical protein	NA	A7TWL2	Staphylococcus_phage	89.0	2.8e-31
>prophage 5
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	1572135	1580465	2737143	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1572135_1572921_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924220.1|1573046_1573937_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001062177.1|1573946_1575293_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683932.1|1575406_1576507_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624585.1|1576509_1577187_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1577317_1578424_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217235.1|1578647_1580465_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	7.9e-54
>prophage 6
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	1650074	1659117	2737143	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1650074_1650593_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594997.1|1650614_1652888_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.1	3.1e-63
WP_000749795.1|1653090_1655370_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1655644_1655905_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1655923_1657063_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1657085_1658111_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1658112_1659117_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	1782973	1860499	2737143	transposase,protease,tRNA	Staphylococcus_phage(94.83%)	75	NA	NA
WP_145393012.1|1782973_1789534_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	96.8	5.9e-301
WP_000836465.1|1789859_1790171_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001108725.1|1790192_1792613_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.7	0.0e+00
WP_145393013.1|1792911_1794084_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	3.4e-215
WP_000526539.1|1794193_1795147_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_145393014.1|1795143_1795707_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	98.9	4.1e-102
WP_000757543.1|1795826_1796228_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1796801_1797629_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1797631_1797751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001834472.1|1797762_1797954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1797862_1798864_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008549.1|1798985_1799450_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159035.1|1799462_1800644_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
WP_000493886.1|1800654_1801287_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	6.4e-112
WP_000384184.1|1801293_1802325_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.7	1.6e-197
WP_001261671.1|1802817_1804320_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.5e-29
WP_000221179.1|1804842_1805157_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_145393015.1|1805156_1806449_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	2.5e-227
WP_001032833.1|1806535_1807390_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1807665_1807890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671052.1|1808088_1808559_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_001153742.1|1808671_1809115_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1809101_1809545_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168907.1|1809840_1810476_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1810915_1811629_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1811888_1812191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1812446_1812812_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623476.1|1812808_1813162_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	98.3	2.0e-22
WP_000453314.1|1813544_1814378_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	100.0	5.4e-159
WP_000366158.1|1814589_1815498_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.0	1.7e-137
WP_145393016.1|1815622_1816816_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	1.6e-217
WP_000109910.1|1817187_1818780_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_016169057.1|1819157_1819904_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	99.2	2.2e-143
WP_000672013.1|1819908_1820382_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1820447_1820705_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778532.1|1820701_1821703_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.8e-186
WP_000348356.1|1821707_1823186_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.6e-281
WP_001793444.1|1824101_1824752_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	99.1	3.0e-56
WP_000070649.1|1824832_1825828_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	4.2e-73
WP_000669017.1|1825901_1826528_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	94.7	3.6e-91
WP_000627541.1|1826568_1826910_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	8.1e-53
WP_000414202.1|1827010_1827583_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	89.7	3.3e-22
WP_000864135.1|1827870_1828338_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	100.0	3.3e-65
WP_000375477.1|1828711_1828888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070811.1|1828898_1829282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001790863.1|1829473_1829683_-|transposase	transposase	transposase	A0A2H4PQV6	Staphylococcus_phage	100.0	1.4e-31
WP_001549059.1|1829885_1830029_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|1830231_1830327_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|1830449_1830551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002868972.1|1830898_1831258_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000072623.1|1836757_1837957_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	1.6e-228
WP_145393017.1|1837949_1839689_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	98.1	7.8e-285
WP_001791797.1|1839669_1839804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038688.1|1839868_1840588_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001038759.1|1840738_1841455_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_145393018.1|1841605_1842325_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	2.3e-129
WP_145393019.1|1842445_1843165_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.6	3.2e-131
WP_001039444.1|1843222_1843945_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	100.0	6.4e-132
WP_001039435.1|1844069_1844777_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001790219.1|1845212_1845431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092763.1|1845740_1846307_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_000586140.1|1846780_1847479_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|1847475_1848237_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|1848233_1848926_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|1848948_1850322_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|1850331_1850850_-	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566596.1|1850865_1852110_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_001092606.1|1852102_1855096_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.1	0.0e+00
WP_000416756.1|1855160_1855304_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_001790705.1|1855747_1855939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000416759.1|1856040_1856184_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000782464.1|1856425_1857409_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000473596.1|1857410_1858346_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_001086056.1|1859242_1859698_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.2	6.3e-61
WP_000206350.1|1859710_1860499_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 8
NZ_CP031265	Staphylococcus aureus strain 13 chromosome, complete genome	2737143	1941728	2020822	2737143	protease,transposase,coat,integrase,tRNA,terminase	Staphylococcus_phage(62.5%)	80	1974814:1974832	2021513:2021531
WP_000027917.1|1941728_1943186_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|1943187_1943490_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|1943856_1945395_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831697.1|1945483_1946683_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_060552792.1|1946695_1948699_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	3.4e-114
WP_000992921.1|1948702_1950895_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272070.1|1950891_1951584_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|1951755_1952058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|1952166_1953462_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_071624295.1|1953701_1953902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000827761.1|1954322_1955489_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434534.1|1955519_1955846_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669861.1|1956137_1956311_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|1956291_1956894_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|1957164_1957986_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284431.1|1957978_1959448_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
WP_000897635.1|1959631_1960708_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_145393021.1|1960727_1961522_+	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_001802312.1|1961593_1961701_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323164.1|1961711_1963274_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275710.1|1963478_1964576_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.3	1.6e-46
WP_000149686.1|1964947_1965508_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|1965560_1966490_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|1966684_1966858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021214.1|1966909_1968289_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181322.1|1968408_1969437_-	lactonase family protein	NA	NA	NA	NA	NA
WP_001284658.1|1969895_1970276_-	penicillinase repressor BlaI	NA	NA	NA	NA	NA
WP_001096367.1|1970265_1972023_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
WP_000733622.1|1972129_1972975_+	penicillin-hydrolyzing class A beta-lactamase BlaZ	NA	A0A1B0VBP7	Salmonella_phage	33.9	4.4e-31
WP_001798151.1|1973279_1973699_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	53.5	3.1e-30
WP_002457078.1|1973741_1975130_-	hypothetical protein	NA	NA	NA	NA	NA
1974814:1974832	attL	TCATTAATATTTGCATTAG	NA	NA	NA	NA
WP_000410574.1|1975116_1975482_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001799177.1|1975490_1977518_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_011082751.1|1977556_1978708_-|integrase	tyrosine-type recombinase/integrase	integrase	P97010	Streptococcus_pyogenes_phage	31.6	1.8e-11
WP_145393022.1|1979730_1979904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145393052.1|1980354_1981395_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|1981451_1982294_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|1982290_1982848_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|1982907_1983432_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|1983552_1984116_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221657.1|1984181_1984922_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|1984921_1985794_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645726.1|1985790_1986471_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991301.1|1986471_1987368_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|1987364_1987745_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|1988003_1988180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|1988422_1988521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068523.1|1988720_1990007_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_001823221.1|1990635_1992381_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000239607.1|1992769_1993762_+	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	99.6	2.4e-161
WP_000595401.1|1993999_1995016_-	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
WP_000791417.1|1995037_1996090_-	bi-component leukocidin LukGH subunit H	NA	A0A2I6PDF3	Staphylococcus_phage	32.1	1.6e-35
WP_000206623.1|1996525_1997749_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000812008.1|1998120_1998966_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000825510.1|1999027_1999939_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_145393023.1|2000099_2001407_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_145393024.1|2003876_2004377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145393025.1|2004990_2005674_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001245081.1|2005874_2007344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024273585.1|2007527_2008097_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.4	3.9e-100
WP_078066471.1|2008093_2008306_-	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	87.1	1.5e-28
WP_024273583.1|2008437_2008965_-|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	96.6	8.3e-89
WP_000448776.1|2009015_2009234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145393026.1|2009251_2009830_-	pathogenicity island protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
WP_001190614.1|2009841_2010183_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
WP_001019789.1|2010529_2011171_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	88.7	3.8e-104
WP_000356943.1|2011167_2011548_-	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	97.6	1.0e-67
WP_145393027.1|2011857_2013567_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	93.1	1.1e-302
WP_024273580.1|2013580_2014450_-	hypothetical protein	NA	Q4ZE74	Staphylococcus_phage	94.8	2.7e-161
WP_024273579.1|2014514_2014844_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	92.7	3.6e-50
WP_000695071.1|2014844_2015228_-	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.9	2.2e-62
WP_001231374.1|2015229_2015433_-	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	97.0	7.5e-30
WP_000784889.1|2015417_2015573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145393028.1|2015569_2015887_-	excisionase family DNA-binding protein	NA	A0A1W6JQE0	Staphylococcus_phage	95.2	9.5e-48
WP_145393029.1|2015900_2016542_-	Bro-N domain-containing protein	NA	A0A1W6JPC3	Staphylococcus_phage	75.6	7.5e-84
WP_024273575.1|2016545_2016716_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_069994121.1|2016919_2017618_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_145393030.1|2017604_2018777_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	96.7	1.0e-216
WP_000240642.1|2018845_2020462_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2020537_2020822_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
2021513:2021531	attR	TCATTAATATTTGCATTAG	NA	NA	NA	NA
