assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007795095.1_ASM779509v1	NZ_CP042218	Luteimonas sp. Gr-4 chromosome, complete genome	1	342953-343122	1	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,WYL	Unclear	GCCTTCTTCGCGACTGCCTTCTT	23	0	0	NA	NA	NA	3	3	Orphan	DEDDh,cas3,csa3,WYL	NA|58aa|up_8|NZ_CP042218.1_333092_333266_-,NA|60aa|up_7|NZ_CP042218.1_333436_333616_+,NA|227aa|up_2|NZ_CP042218.1_339767_340448_+,NA	NA|304aa|up_9|NZ_CP042218.1_332169_333081_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|58aa|up_8|NZ_CP042218.1_333092_333266_-	NA	NA|60aa|up_7|NZ_CP042218.1_333436_333616_+	NA	NA|193aa|up_6|NZ_CP042218.1_333619_334198_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|748aa|up_5|NZ_CP042218.1_334246_336490_+	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|222aa|up_4|NZ_CP042218.1_336489_337155_+	PRK13255, PRK13255, thiopurine S-methyltransferase; Reviewed	NA|809aa|up_3|NZ_CP042218.1_337267_339694_+	pfam01804, Penicil_amidase, Penicillin amidase	NA|227aa|up_2|NZ_CP042218.1_339767_340448_+	NA	NA|377aa|up_1|NZ_CP042218.1_340509_341640_-	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|120aa|up_0|NZ_CP042218.1_341636_341996_-	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC	NA|877aa|down_0|NZ_CP042218.1_343157_345788_-	PRK04374, PRK04374, [protein-PII] uridylyltransferase	NA|258aa|down_1|NZ_CP042218.1_345789_346563_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|278aa|down_2|NZ_CP042218.1_346879_347713_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|290aa|down_3|NZ_CP042218.1_347799_348669_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|491aa|down_4|NZ_CP042218.1_348828_350301_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|241aa|down_5|NZ_CP042218.1_350364_351087_+	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway)	NA|186aa|down_6|NZ_CP042218.1_351136_351694_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|256aa|down_7|NZ_CP042218.1_351704_352472_+	PRK14836, PRK14836, undecaprenyl pyrophosphate synthase; Provisional	NA|275aa|down_8|NZ_CP042218.1_352468_353293_+	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|390aa|down_9|NZ_CP042218.1_353292_354462_+	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
GCF_007795095.1_ASM779509v1	NZ_CP042218	Luteimonas sp. Gr-4 chromosome, complete genome	2	799572-799652	2	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL	Orphan	AGGAGCGGCTACAGCCGCGAATGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL	NA|99aa|up_8|NZ_CP042218.1_784915_785212_+,NA|68aa|down_6|NZ_CP042218.1_804512_804716_-	NA|278aa|up_9|NZ_CP042218.1_783989_784823_+	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases	NA|99aa|up_8|NZ_CP042218.1_784915_785212_+	NA	NA|530aa|up_7|NZ_CP042218.1_785387_786977_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|287aa|up_6|NZ_CP042218.1_787095_787956_+	pfam01904, DUF72, Protein of unknown function DUF72	NA|304aa|up_5|NZ_CP042218.1_788040_788952_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|300aa|up_4|NZ_CP042218.1_789070_789970_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|314aa|up_3|NZ_CP042218.1_789996_790938_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|76aa|up_2|NZ_CP042218.1_790984_791212_+	pfam13275, S4_2, S4 domain	NA|589aa|up_1|NZ_CP042218.1_791757_793524_+	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|611aa|up_0|NZ_CP042218.1_793543_795376_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|494aa|down_0|NZ_CP042218.1_800355_801837_-	cd03468, PolY_like, DNA Polymerase Y-family	NA|243aa|down_1|NZ_CP042218.1_801844_802573_-	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA	NA|207aa|down_2|NZ_CP042218.1_802569_803190_-	PRK12423, PRK12423, LexA repressor; Provisional	NA|80aa|down_3|NZ_CP042218.1_803380_803620_+	pfam03693, ParD_antitoxin, Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH	NA|100aa|down_4|NZ_CP042218.1_803616_803916_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|200aa|down_5|NZ_CP042218.1_803926_804526_-	pfam13376, OmdA, Bacteriocin-protection, YdeI or OmpD-Associated	NA|68aa|down_6|NZ_CP042218.1_804512_804716_-	NA	NA|128aa|down_7|NZ_CP042218.1_804812_805196_-	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|367aa|down_8|NZ_CP042218.1_805197_806298_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|133aa|down_9|NZ_CP042218.1_806307_806706_-	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]
GCF_007795095.1_ASM779509v1	NZ_CP042218	Luteimonas sp. Gr-4 chromosome, complete genome	3	1579489-1579563	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL	Orphan	CGGGGCCGCCGCGACATCCATCGC	24	1	1	1579513-1579539	NZ_CP042218.1_800150-800124	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL	NA|226aa|up_6|NZ_CP042218.1_1573759_1574437_-,NA|132aa|down_8|NZ_CP042218.1_1587756_1588152_-	NA|632aa|up_9|NZ_CP042218.1_1564840_1566736_-	TIGR01447, recD, exodeoxyribonuclease V, alpha subunit	NA|1210aa|up_8|NZ_CP042218.1_1566732_1570362_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|1127aa|up_7|NZ_CP042218.1_1570358_1573739_-	TIGR01450, recC, exodeoxyribonuclease V, gamma subunit	NA|226aa|up_6|NZ_CP042218.1_1573759_1574437_-	NA	NA|296aa|up_5|NZ_CP042218.1_1575154_1576042_+	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|250aa|up_4|NZ_CP042218.1_1576041_1576791_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|178aa|up_3|NZ_CP042218.1_1576825_1577359_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|225aa|up_2|NZ_CP042218.1_1577355_1578030_+	pfam05494, MlaC, MlaC protein	NA|99aa|up_1|NZ_CP042218.1_1578010_1578307_+	COG3113, COG3113, Predicted NTP binding protein (contains STAS domain) [General function prediction only]	NA|374aa|up_0|NZ_CP042218.1_1578329_1579451_+	pfam04333, MlaA, MlaA lipoprotein	NA|460aa|down_0|NZ_CP042218.1_1579616_1580996_-	COG1322, COG1322, Predicted nuclease of restriction endonuclease-like fold, RmuC family [General function prediction only]	NA|118aa|down_1|NZ_CP042218.1_1581049_1581403_+	COG3189, COG3189, Uncharacterized conserved protein [Function unknown]	NA|389aa|down_2|NZ_CP042218.1_1581920_1583087_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|261aa|down_3|NZ_CP042218.1_1583214_1583997_+	pfam01694, Rhomboid, Rhomboid family	NA|399aa|down_4|NZ_CP042218.1_1584076_1585273_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|566aa|down_5|NZ_CP042218.1_1585302_1587000_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|102aa|down_6|NZ_CP042218.1_1587059_1587365_-	cd17808, HipA_Ec_like, type II toxin-antitoxin sytem toxin HipA from Escherichia coli and similar proteins	NA|92aa|down_7|NZ_CP042218.1_1587484_1587760_-	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|132aa|down_8|NZ_CP042218.1_1587756_1588152_-	NA	NA|97aa|down_9|NZ_CP042218.1_1588283_1588574_-	pfam11731, Cdd1, Pathogenicity locus
GCF_007795095.1_ASM779509v1	NZ_CP042218	Luteimonas sp. Gr-4 chromosome, complete genome	4	2033758-2033849	4	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL	Orphan	GAGGGCGAGGAGGCGCTGGCCGA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL	NA,NA	NA|431aa|up_9|NZ_CP042218.1_2019639_2020932_-	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|214aa|up_8|NZ_CP042218.1_2020933_2021575_-	PRK00043, thiE, thiamine phosphate synthase	NA|76aa|up_7|NZ_CP042218.1_2021629_2021857_+	COG1773, COG1773, Rubredoxin [Energy production and conversion]	NA|151aa|up_6|NZ_CP042218.1_2021864_2022317_-	pfam02643, DUF192, Uncharacterized ACR, COG1430	NA|216aa|up_5|NZ_CP042218.1_2028480_2029128_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|162aa|up_4|NZ_CP042218.1_2029124_2029610_-	COG2947, COG2947, Uncharacterized conserved protein [Function unknown]	NA|194aa|up_3|NZ_CP042218.1_2029606_2030188_-	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|98aa|up_2|NZ_CP042218.1_2030509_2030803_-	pfam05164, ZapA, Cell division protein ZapA	NA|74aa|up_1|NZ_CP042218.1_2030799_2031021_-	TIGR02449, conserved_hypothetical_protein, TIGR02449 family protein	NA|711aa|up_0|NZ_CP042218.1_2031053_2033186_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|422aa|down_0|NZ_CP042218.1_2033993_2035259_+	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|447aa|down_1|NZ_CP042218.1_2035266_2036607_-	PRK13607, PRK13607, proline dipeptidase; Provisional	NA|117aa|down_2|NZ_CP042218.1_2036671_2037022_-	pfam07238, PilZ, PilZ domain	NA|786aa|down_3|NZ_CP042218.1_2037018_2039376_-	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|200aa|down_4|NZ_CP042218.1_2040648_2041248_-	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed	NA|244aa|down_5|NZ_CP042218.1_2041251_2041983_-	PRK00173, rph, ribonuclease PH; Reviewed	NA|287aa|down_6|NZ_CP042218.1_2042047_2042908_+	PRK11820, PRK11820, YicC family protein	NA|222aa|down_7|NZ_CP042218.1_2042900_2043566_+	PRK00300, gmk, guanylate kinase; Provisional	NA|100aa|down_8|NZ_CP042218.1_2043659_2043959_+	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|719aa|down_9|NZ_CP042218.1_2044092_2046249_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]
GCF_007795095.1_ASM779509v1	NZ_CP042218	Luteimonas sp. Gr-4 chromosome, complete genome	5	2733532-2733642	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL	Orphan	CAGGAGCGGCTCCGTTGTGGCCCGCGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL	NA|78aa|up_8|NZ_CP042218.1_2724066_2724300_-,NA|126aa|up_2|NZ_CP042218.1_2730935_2731313_+,NA|207aa|up_1|NZ_CP042218.1_2731411_2732032_+,NA|59aa|down_0|NZ_CP042218.1_2734138_2734315_+	NA|436aa|up_9|NZ_CP042218.1_2722762_2724070_+	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|78aa|up_8|NZ_CP042218.1_2724066_2724300_-	NA	NA|452aa|up_7|NZ_CP042218.1_2724501_2725857_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|1037aa|up_6|NZ_CP042218.1_2725903_2729014_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|89aa|up_5|NZ_CP042218.1_2729124_2729391_+	PRK11019, PRK11019, DksA/TraR family C4-type zinc finger protein	NA|260aa|up_4|NZ_CP042218.1_2729470_2730250_+	PRK04457, PRK04457, polyamine aminopropyltransferase	NA|211aa|up_3|NZ_CP042218.1_2730237_2730870_+	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|126aa|up_2|NZ_CP042218.1_2730935_2731313_+	NA	NA|207aa|up_1|NZ_CP042218.1_2731411_2732032_+	NA	NA|394aa|up_0|NZ_CP042218.1_2732041_2733223_-	pfam03486, HI0933_like, HI0933-like protein	NA|59aa|down_0|NZ_CP042218.1_2734138_2734315_+	NA	NA|282aa|down_1|NZ_CP042218.1_2736269_2737115_-	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed	NA|215aa|down_2|NZ_CP042218.1_2737111_2737756_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|370aa|down_3|NZ_CP042218.1_2738895_2740005_+	PRK05382, PRK05382, chorismate synthase; Validated	NA|330aa|down_4|NZ_CP042218.1_2739997_2740987_+	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH)	NA|339aa|down_5|NZ_CP042218.1_2741785_2742802_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|631aa|down_6|NZ_CP042218.1_2742886_2744779_+	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|278aa|down_7|NZ_CP042218.1_2744830_2745664_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|229aa|down_8|NZ_CP042218.1_2745665_2746352_+	PRK01222, PRK01222, phosphoribosylanthranilate isomerase	NA|405aa|down_9|NZ_CP042218.1_2746348_2747563_+	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated
