assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	1	628121-628222	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|70aa|up_9|NZ_CP042043.1_619680_619890_-,NA|128aa|up_7|NZ_CP042043.1_620714_621098_-,NA|33aa|up_1|NZ_CP042043.1_627345_627444_+,NA|86aa|up_0|NZ_CP042043.1_627654_627912_-,NA|221aa|down_1|NZ_CP042043.1_629312_629975_-,NA|179aa|down_7|NZ_CP042043.1_636066_636603_-	NA|70aa|up_9|NZ_CP042043.1_619680_619890_-	NA	NA|194aa|up_8|NZ_CP042043.1_620067_620649_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|NZ_CP042043.1_620714_621098_-	NA	NA|209aa|up_6|NZ_CP042043.1_621367_621994_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|508aa|up_5|NZ_CP042043.1_622437_623961_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_4|NZ_CP042043.1_623976_624546_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_3|NZ_CP042043.1_625037_625793_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_2|NZ_CP042043.1_625872_627261_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|33aa|up_1|NZ_CP042043.1_627345_627444_+	NA	NA|86aa|up_0|NZ_CP042043.1_627654_627912_-	NA	NA|319aa|down_0|NZ_CP042043.1_628238_629195_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|221aa|down_1|NZ_CP042043.1_629312_629975_-	NA	NA|136aa|down_2|NZ_CP042043.1_630117_630525_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP042043.1_631037_631616_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP042043.1_631615_632884_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP042043.1_632921_634388_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP042043.1_634412_635954_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|NZ_CP042043.1_636066_636603_-	NA	NA|235aa|down_8|NZ_CP042043.1_636994_637699_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|NZ_CP042043.1_638097_638370_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	2	975165-975247	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|69aa|up_9|NZ_CP042043.1_961778_961985_+,NA|56aa|down_0|NZ_CP042043.1_975458_975626_+,NA|34aa|down_2|NZ_CP042043.1_976902_977004_+,NA|89aa|down_6|NZ_CP042043.1_980700_980967_+	NA|69aa|up_9|NZ_CP042043.1_961778_961985_+	NA	NA|237aa|up_8|NZ_CP042043.1_962072_962783_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP042043.1_962766_963771_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP042043.1_964244_966185_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP042043.1_966454_968338_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP042043.1_968349_970131_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP042043.1_970352_971330_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP042043.1_971322_972837_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP042043.1_973076_974135_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP042043.1_974473_975016_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|56aa|down_0|NZ_CP042043.1_975458_975626_+	NA	NA|306aa|down_1|NZ_CP042043.1_975894_976812_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_2|NZ_CP042043.1_976902_977004_+	NA	NA|502aa|down_3|NZ_CP042043.1_977081_978587_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_4|NZ_CP042043.1_978929_979430_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_5|NZ_CP042043.1_979449_980316_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|89aa|down_6|NZ_CP042043.1_980700_980967_+	NA	NA|133aa|down_7|NZ_CP042043.1_981116_981515_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_8|NZ_CP042043.1_981477_983583_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_9|NZ_CP042043.1_983700_984672_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	3	1016114-1016192	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TGTAGAATTTCTTTTCGAAATTCT	24	1	3	1016138-1016168|1016138-1016168|1016138-1016168	NZ_CP042043.1_513041-513011|NZ_CP042043.1_512986-512956|NZ_CP042043.1_1905123-1905153	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA|35aa|up_7|NZ_CP042043.1_1006990_1007095_+,NA|36aa|up_5|NZ_CP042043.1_1008527_1008635_+,NA	NA|191aa|up_9|NZ_CP042043.1_1003431_1004004_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_CP042043.1_1004417_1006949_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NZ_CP042043.1_1006990_1007095_+	NA	NA|370aa|up_6|NZ_CP042043.1_1007263_1008374_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_CP042043.1_1008527_1008635_+	NA	NA|280aa|up_4|NZ_CP042043.1_1008782_1009622_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_CP042043.1_1009795_1010446_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_CP042043.1_1010442_1010679_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_CP042043.1_1010947_1012933_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_CP042043.1_1012940_1015787_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_CP042043.1_1016450_1017383_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_CP042043.1_1017388_1018228_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_CP042043.1_1018235_1018721_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_CP042043.1_1018728_1020168_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_CP042043.1_1020234_1021170_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NZ_CP042043.1_1021938_1022850_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NZ_CP042043.1_1022846_1023842_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_7|NZ_CP042043.1_1023952_1024897_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_8|NZ_CP042043.1_1025460_1026048_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_9|NZ_CP042043.1_1026290_1027193_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	4	1021572-1021662	4	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,RT,WYL	Unclear	TCTGTGTTGGGGCCCACACCCCAACTCGCATTG	33	1	15	1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629|1021605-1021629	NZ_CP042043.1_389764-389740|NZ_CP042043.1_389822-389798|NZ_CP042043.1_512957-512933|NZ_CP042043.1_513067-513043|NZ_CP042043.1_851372-851348|NZ_CP042043.1_1599452-1599428|NZ_CP042043.1_1885402-1885378|NZ_CP042043.1_974206-974230|NZ_CP042043.1_1065042-1065066|NZ_CP042043.1_1870847-1870871|NZ_CP042043.1_2210881-2210905|NZ_CP042043.1_513012-512988|NZ_CP042043.1_1191704-1191728|NZ_CP042043.1_1905097-1905121|NZ_CP042043.1_1905211-1905235	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA	NA|280aa|up_9|NZ_CP042043.1_1008782_1009622_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_8|NZ_CP042043.1_1009795_1010446_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_7|NZ_CP042043.1_1010442_1010679_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_6|NZ_CP042043.1_1010947_1012933_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_5|NZ_CP042043.1_1012940_1015787_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|up_4|NZ_CP042043.1_1016450_1017383_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|up_3|NZ_CP042043.1_1017388_1018228_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|up_2|NZ_CP042043.1_1018235_1018721_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_1|NZ_CP042043.1_1018728_1020168_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|up_0|NZ_CP042043.1_1020234_1021170_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_0|NZ_CP042043.1_1021938_1022850_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_1|NZ_CP042043.1_1022846_1023842_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_2|NZ_CP042043.1_1023952_1024897_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_3|NZ_CP042043.1_1025460_1026048_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_4|NZ_CP042043.1_1026290_1027193_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|down_5|NZ_CP042043.1_1027895_1028525_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_6|NZ_CP042043.1_1029337_1030351_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_7|NZ_CP042043.1_1030403_1031414_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_8|NZ_CP042043.1_1031552_1032743_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_9|NZ_CP042043.1_1032864_1033626_+	PRK00042, tpiA, triosephosphate isomerase; Provisional
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	5	1064969-1065050	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	1	1064993-1065026	NZ_CP042043.1_1599560-1599527	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|38aa|up_1|NZ_CP042043.1_1063871_1063985_+,NA	NA|206aa|up_9|NZ_CP042043.1_1058725_1059343_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|NZ_CP042043.1_1059497_1059992_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|NZ_CP042043.1_1060390_1060813_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|NZ_CP042043.1_1060960_1061677_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|NZ_CP042043.1_1061759_1062299_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|NZ_CP042043.1_1062449_1062770_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|NZ_CP042043.1_1062913_1063270_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|NZ_CP042043.1_1063427_1063808_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|NZ_CP042043.1_1063871_1063985_+	NA	NA|293aa|up_0|NZ_CP042043.1_1063986_1064865_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP042043.1_1065661_1066048_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP042043.1_1066040_1066337_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP042043.1_1066586_1067612_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP042043.1_1067604_1068300_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP042043.1_1068317_1069139_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|407aa|down_5|NZ_CP042043.1_1069282_1070503_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|463aa|down_6|NZ_CP042043.1_1070516_1071905_-	pfam02037, SAP, SAP domain	NA|191aa|down_7|NZ_CP042043.1_1071931_1072504_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|74aa|down_8|NZ_CP042043.1_1072675_1072897_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|91aa|down_9|NZ_CP042043.1_1072897_1073170_+	pfam13545, HTH_Crp_2, Crp-like helix-turn-helix domain
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	6	1870771-1870855	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	CACCCCAACTTGCATTGTCTGTAGAA	26	1	2	1870797-1870829|1870797-1870829	NZ_CP042043.1_389872-389840|NZ_CP042043.1_1599560-1599528	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA,NA	NA|228aa|up_9|NZ_CP042043.1_1859980_1860664_-	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]	NA|59aa|up_8|NZ_CP042043.1_1860907_1861084_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|449aa|up_7|NZ_CP042043.1_1861376_1862723_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|251aa|up_6|NZ_CP042043.1_1862729_1863482_-	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|313aa|up_5|NZ_CP042043.1_1863483_1864422_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|380aa|up_4|NZ_CP042043.1_1864425_1865565_-	PRK14280, PRK14280, molecular chaperone DnaJ	NA|611aa|up_3|NZ_CP042043.1_1865700_1867533_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|209aa|up_2|NZ_CP042043.1_1867601_1868228_-	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|326aa|up_1|NZ_CP042043.1_1868259_1869237_-	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|375aa|up_0|NZ_CP042043.1_1869337_1870462_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|608aa|down_0|NZ_CP042043.1_1871027_1872851_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|84aa|down_1|NZ_CP042043.1_1873196_1873448_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|325aa|down_2|NZ_CP042043.1_1873492_1874467_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|716aa|down_3|NZ_CP042043.1_1874523_1876671_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|154aa|down_4|NZ_CP042043.1_1876729_1877191_-	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|229aa|down_5|NZ_CP042043.1_1877282_1877969_-	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|239aa|down_6|NZ_CP042043.1_1878008_1878725_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|118aa|down_7|NZ_CP042043.1_1878727_1879081_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|195aa|down_8|NZ_CP042043.1_1879081_1879666_-	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|190aa|down_9|NZ_CP042043.1_1879655_1880225_-	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	7	2444918-2444998	7	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,RT,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|77aa|up_5|NZ_CP042043.1_2439792_2440023_-,NA|364aa|up_0|NZ_CP042043.1_2443809_2444901_+,NA|35aa|down_0|NZ_CP042043.1_2445333_2445438_-,NA|61aa|down_1|NZ_CP042043.1_2445870_2446053_-,NA|53aa|down_2|NZ_CP042043.1_2446117_2446276_+,NA|31aa|down_3|NZ_CP042043.1_2446712_2446805_+	NA|237aa|up_9|NZ_CP042043.1_2435403_2436114_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP042043.1_2436234_2436678_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP042043.1_2436877_2437291_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP042043.1_2437747_2439121_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP042043.1_2439792_2440023_-	NA	NA|313aa|up_4|NZ_CP042043.1_2440053_2440992_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP042043.1_2441427_2442093_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP042043.1_2442244_2442565_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|326aa|up_1|NZ_CP042043.1_2442566_2443544_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP042043.1_2443809_2444901_+	NA	NA|35aa|down_0|NZ_CP042043.1_2445333_2445438_-	NA	NA|61aa|down_1|NZ_CP042043.1_2445870_2446053_-	NA	NA|53aa|down_2|NZ_CP042043.1_2446117_2446276_+	NA	NA|31aa|down_3|NZ_CP042043.1_2446712_2446805_+	NA	NA|286aa|down_4|NZ_CP042043.1_2446933_2447791_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_5|NZ_CP042043.1_2447858_2448641_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_6|NZ_CP042043.1_2448872_2450678_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_7|NZ_CP042043.1_2451358_2452897_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_8|NZ_CP042043.1_2452931_2455064_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_9|NZ_CP042043.1_2455075_2455510_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	8	2457239-2457324	8	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,RT,WYL	Type I-A	CCAACTGATTTTTGCGTATCATTAGT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|61aa|up_9|NZ_CP042043.1_2445870_2446053_-,NA|53aa|up_8|NZ_CP042043.1_2446117_2446276_+,NA|31aa|up_7|NZ_CP042043.1_2446712_2446805_+,NA	NA|61aa|up_9|NZ_CP042043.1_2445870_2446053_-	NA	NA|53aa|up_8|NZ_CP042043.1_2446117_2446276_+	NA	NA|31aa|up_7|NZ_CP042043.1_2446712_2446805_+	NA	NA|286aa|up_6|NZ_CP042043.1_2446933_2447791_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|up_5|NZ_CP042043.1_2447858_2448641_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|up_4|NZ_CP042043.1_2448872_2450678_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|up_3|NZ_CP042043.1_2451358_2452897_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|up_2|NZ_CP042043.1_2452931_2455064_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|up_1|NZ_CP042043.1_2455075_2455510_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|up_0|NZ_CP042043.1_2455509_2456616_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_0|NZ_CP042043.1_2464657_2466013_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_1|NZ_CP042043.1_2466039_2466972_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|270aa|down_2|NZ_CP042043.1_2466973_2467783_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_3|NZ_CP042043.1_2467971_2468880_-	cd09989, Arginase, Arginase family	NA|355aa|down_4|NZ_CP042043.1_2475120_2476185_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|481aa|down_5|NZ_CP042043.1_2476332_2477775_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|158aa|down_6|NZ_CP042043.1_2478097_2478571_-	pfam17080, SepA, Multidrug Resistance efflux pump	NA|448aa|down_7|NZ_CP042043.1_2478669_2480013_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|228aa|down_8|NZ_CP042043.1_2480189_2480873_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|396aa|down_9|NZ_CP042043.1_2480891_2482079_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc
GCF_007726495.1_ASM772649v1	NZ_CP042043	Staphylococcus aureus strain B2-15A chromosome, complete genome	9	2565282-2565362	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	TCTATGTTGGGGCCCCGCCAACTTG	25	1	15	2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337|2565307-2565337	NZ_CP042043.1_1028740-1028770|NZ_CP042043.1_1028796-1028826|NZ_CP042043.1_275759-275789|NZ_CP042043.1_1028852-1028882|NZ_CP042043.1_1065305-1065335|NZ_CP042043.1_1289221-1289251|NZ_CP042043.1_1689440-1689470|NZ_CP042043.1_2209533-2209563|NZ_CP042043.1_2554506-2554536|NZ_CP042043.1_2730391-2730421|NZ_CP042043.1_589413-589383|NZ_CP042043.1_851436-851406|NZ_CP042043.1_1393418-1393388|NZ_CP042043.1_1599516-1599486|NZ_CP042043.1_1885465-1885435	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL	NA|55aa|up_8|NZ_CP042043.1_2555815_2555980_+,NA|106aa|up_7|NZ_CP042043.1_2556224_2556542_+,NA|84aa|up_5|NZ_CP042043.1_2561663_2561915_+,NA|62aa|up_0|NZ_CP042043.1_2565054_2565240_+,NA	NA|303aa|up_9|NZ_CP042043.1_2554774_2555683_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|55aa|up_8|NZ_CP042043.1_2555815_2555980_+	NA	NA|106aa|up_7|NZ_CP042043.1_2556224_2556542_+	NA	NA|422aa|up_6|NZ_CP042043.1_2560009_2561275_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP042043.1_2561663_2561915_+	NA	NA|255aa|up_4|NZ_CP042043.1_2561906_2562671_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP042043.1_2562832_2563273_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP042043.1_2563265_2564477_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP042043.1_2564578_2564929_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|62aa|up_0|NZ_CP042043.1_2565054_2565240_+	NA	NA|341aa|down_0|NZ_CP042043.1_2565505_2566528_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP042043.1_2566547_2567147_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP042043.1_2567153_2567387_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP042043.1_2567392_2567839_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP042043.1_2567852_2568338_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP042043.1_2568334_2569594_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP042043.1_2569656_2570151_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP042043.1_2570152_2570659_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP042043.1_2570689_2571694_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP042043.1_2571863_2572469_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
