assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007724845.1_ASM772484v1	NZ_CP041994	Streptococcus suis strain INT-01 chromosome, complete genome	1	217401-217484	1	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas9,cas1,cas2,csn2	Orphan	AACTTCGTTCGCTCTATTTCCAACCTCC	28	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas9,cas1,cas2,csn2	NA,NA|157aa|down_3|NZ_CP041994.1_221762_222233_+,NA|181aa|down_4|NZ_CP041994.1_222252_222795_+,NA|252aa|down_7|NZ_CP041994.1_224420_225176_-	NA|372aa|up_9|NZ_CP041994.1_207247_208363_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|326aa|up_8|NZ_CP041994.1_208373_209351_-	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|189aa|up_7|NZ_CP041994.1_209495_210062_-	cd07762, CYTH-like_Pase_1, Uncharacterized subgroup 1 of the CYTH-like superfamily	NA|224aa|up_6|NZ_CP041994.1_210148_210820_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|273aa|up_5|NZ_CP041994.1_210803_211622_+	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|298aa|up_4|NZ_CP041994.1_211621_212515_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|325aa|up_3|NZ_CP041994.1_212532_213507_+	PRK09653, eutD, phosphotransacetylase	NA|579aa|up_2|NZ_CP041994.1_213508_215245_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|581aa|up_1|NZ_CP041994.1_215231_216974_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|129aa|up_0|NZ_CP041994.1_216963_217350_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|377aa|down_0|NZ_CP041994.1_217614_218745_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|419aa|down_1|NZ_CP041994.1_219301_220558_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|down_2|NZ_CP041994.1_220830_221631_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|157aa|down_3|NZ_CP041994.1_221762_222233_+	NA	NA|181aa|down_4|NZ_CP041994.1_222252_222795_+	NA	NA|344aa|down_5|NZ_CP041994.1_223020_224052_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|63aa|down_6|NZ_CP041994.1_224143_224332_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|252aa|down_7|NZ_CP041994.1_224420_225176_-	NA	NA|256aa|down_8|NZ_CP041994.1_225454_226222_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|141aa|down_9|NZ_CP041994.1_226427_226850_+	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed
GCF_007724845.1_ASM772484v1	NZ_CP041994	Streptococcus suis strain INT-01 chromosome, complete genome	2	959293-959367	2	CRISPRCasFinder	no		DinG,cas3,DEDDh,csa3,cas9,cas1,cas2,csn2	Orphan	GGACCTTAATTCGCTTTCTTGTTTT	25	1	1	959318-959342	NZ_CP041994.1_960841-960865	NA	1	1	Orphan	DinG,cas3,DEDDh,csa3,cas9,cas1,cas2,csn2	NA|89aa|up_0|NZ_CP041994.1_958275_958542_-,NA	NA|138aa|up_9|NZ_CP041994.1_953180_953594_-	PRK09203, rplP, 50S ribosomal protein L16; Reviewed	NA|218aa|up_8|NZ_CP041994.1_953597_954251_-	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed	NA|115aa|up_7|NZ_CP041994.1_954263_954608_-	PRK00565, rplV, 50S ribosomal protein L22; Reviewed	NA|94aa|up_6|NZ_CP041994.1_954625_954907_-	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed	NA|278aa|up_5|NZ_CP041994.1_955008_955842_-	PRK09374, rplB, 50S ribosomal protein L2; Validated	NA|100aa|up_4|NZ_CP041994.1_955859_956159_-	PRK05738, rplW, 50S ribosomal protein L23; Reviewed	NA|208aa|up_3|NZ_CP041994.1_956158_956782_-	PRK05319, rplD, 50S ribosomal protein L4; Provisional	NA|209aa|up_2|NZ_CP041994.1_956806_957433_-	PRK00001, rplC, 50S ribosomal protein L3; Validated	NA|103aa|up_1|NZ_CP041994.1_957645_957954_-	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed	NA|89aa|up_0|NZ_CP041994.1_958275_958542_-	NA	NA|419aa|down_0|NZ_CP041994.1_959491_960748_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|107aa|down_1|NZ_CP041994.1_960873_961194_-	PRK13678, PRK13678, hypothetical protein; Provisional	NA|140aa|down_2|NZ_CP041994.1_961205_961625_-	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|89aa|down_3|NZ_CP041994.1_961624_961891_-	PRK05473, IreB-like, IreB family regulatory phosphoprotein	NA|133aa|down_4|NZ_CP041994.1_961990_962389_-	PRK13344, spxA, transcriptional regulator Spx; Reviewed	NA|384aa|down_5|NZ_CP041994.1_962624_963776_-	PRK09354, recA, recombinase A; Provisional	NA|394aa|down_6|NZ_CP041994.1_963827_965009_-	PRK00549, PRK00549, competence damage-inducible protein A; Provisional	NA|190aa|down_7|NZ_CP041994.1_965045_965615_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|197aa|down_8|NZ_CP041994.1_965868_966459_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|646aa|down_9|NZ_CP041994.1_966497_968435_-	PRK00095, mutL, DNA mismatch repair endonuclease MutL
GCF_007724845.1_ASM772484v1	NZ_CP041994	Streptococcus suis strain INT-01 chromosome, complete genome	3	2047840-2048533	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	DinG,cas3,DEDDh,csa3,cas9,cas1,cas2,csn2	Type II-A,Type II-B,Type II-C	GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC,GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC,GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC	36,36,36	1	1	2047942-2047970	NZ_CP041994.1_285309-285337	NA:NA:NA	9,10,10	10	TypeII-A,TypeII-B,TypeII-C	DinG,cas3,DEDDh,csa3,cas9,cas1,cas2,csn2	NA|101aa|up_6|NZ_CP041994.1_2038297_2038600_+,NA|365aa|up_5|NZ_CP041994.1_2038721_2039816_-,NA	NA|261aa|up_9|NZ_CP041994.1_2035291_2036074_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|194aa|up_8|NZ_CP041994.1_2036146_2036728_+	pfam04011, LemA, LemA family	NA|488aa|up_7|NZ_CP041994.1_2036739_2038203_+	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|101aa|up_6|NZ_CP041994.1_2038297_2038600_+	NA	NA|365aa|up_5|NZ_CP041994.1_2038721_2039816_-	NA	NA|458aa|up_4|NZ_CP041994.1_2039909_2041283_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	cas9|1123aa|up_3|NZ_CP041994.1_2041966_2045335_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|305aa|up_2|NZ_CP041994.1_2045501_2046416_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|108aa|up_1|NZ_CP041994.1_2046412_2046736_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|349aa|up_0|NZ_CP041994.1_2046732_2047779_+	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	NA|225aa|down_0|NZ_CP041994.1_2048634_2049309_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|404aa|down_1|NZ_CP041994.1_2049637_2050849_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|119aa|down_2|NZ_CP041994.1_2050848_2051205_+	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|270aa|down_3|NZ_CP041994.1_2051216_2052026_+	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|238aa|down_4|NZ_CP041994.1_2052058_2052772_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|756aa|down_5|NZ_CP041994.1_2052947_2055215_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|193aa|down_6|NZ_CP041994.1_2055349_2055928_-	pfam04892, VanZ, VanZ like family	NA|376aa|down_7|NZ_CP041994.1_2056022_2057150_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|247aa|down_8|NZ_CP041994.1_2057380_2058121_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|206aa|down_9|NZ_CP041994.1_2058107_2058725_+	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
