assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007637635.1_ASM763763v1	NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	1	2120454-2122271	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,csn2	csa3,DEDDh,cas3,DinG,WYL,csa5gr11,cas1,cas2,csn2	Type II-A	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC,GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC,GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	36,36,36	0	0	NA	NA	NA:NA:NA	26,27,27	27	TypeII-A	csa3,DEDDh,cas3,DinG,WYL,csa5gr11,cas1,cas2,csn2	NA|108aa|up_6|NZ_CP041944.1_2110136_2110460_-,NA|389aa|up_4|NZ_CP041944.1_2111126_2112293_+,NA|265aa|up_3|NZ_CP041944.1_2112293_2113088_+,NA|367aa|down_0|NZ_CP041944.1_2122551_2123652_+	NA|338aa|up_9|NZ_CP041944.1_2105604_2106618_+	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|581aa|up_8|NZ_CP041944.1_2106614_2108357_+	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|576aa|up_7|NZ_CP041944.1_2108337_2110065_+	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|108aa|up_6|NZ_CP041944.1_2110136_2110460_-	NA	NA|125aa|up_5|NZ_CP041944.1_2110528_2110903_-	pfam06486, DUF1093, Protein of unknown function (DUF1093)	NA|389aa|up_4|NZ_CP041944.1_2111126_2112293_+	NA	NA|265aa|up_3|NZ_CP041944.1_2112293_2113088_+	NA	cas1|302aa|up_2|NZ_CP041944.1_2117512_2118418_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|99aa|up_1|NZ_CP041944.1_2119458_2119755_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|226aa|up_0|NZ_CP041944.1_2119751_2120429_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|367aa|down_0|NZ_CP041944.1_2122551_2123652_+	NA	NA|142aa|down_1|NZ_CP041944.1_2123803_2124229_+	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown]	NA|564aa|down_2|NZ_CP041944.1_2124425_2126117_+	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|544aa|down_3|NZ_CP041944.1_2126113_2127745_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|286aa|down_4|NZ_CP041944.1_2127882_2128740_+	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|613aa|down_5|NZ_CP041944.1_2129191_2131030_+	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|483aa|down_6|NZ_CP041944.1_2131200_2132649_+	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed	NA|189aa|down_7|NZ_CP041944.1_2132775_2133342_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|473aa|down_8|NZ_CP041944.1_2133632_2135051_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|444aa|down_9|NZ_CP041944.1_2135256_2136588_+	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
GCF_007637635.1_ASM763763v1	NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	2	2480887-2481004	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,csa5gr11,cas1,cas2,csn2	Orphan	GCTGGCCCAGAAACCTACACATAAGGACC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,csa5gr11,cas1,cas2,csn2	NA|56aa|up_7|NZ_CP041944.1_2471176_2471344_+,NA|141aa|up_2|NZ_CP041944.1_2477046_2477469_+,NA|125aa|up_1|NZ_CP041944.1_2477608_2477983_+,NA	NA|164aa|up_9|NZ_CP041944.1_2468551_2469043_+	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism]	NA|704aa|up_8|NZ_CP041944.1_2469029_2471141_+	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|56aa|up_7|NZ_CP041944.1_2471176_2471344_+	NA	NA|556aa|up_6|NZ_CP041944.1_2471558_2473226_+	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|106aa|up_5|NZ_CP041944.1_2473396_2473714_+	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH	NA|379aa|up_4|NZ_CP041944.1_2473822_2474959_-	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase	NA|477aa|up_3|NZ_CP041944.1_2475053_2476484_-	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	NA|141aa|up_2|NZ_CP041944.1_2477046_2477469_+	NA	NA|125aa|up_1|NZ_CP041944.1_2477608_2477983_+	NA	NA|773aa|up_0|NZ_CP041944.1_2478408_2480727_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|489aa|down_0|NZ_CP041944.1_2481202_2482669_+	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|276aa|down_1|NZ_CP041944.1_2482730_2483558_+	TIGR03729, acc_ester, putative phosphoesterase	NA|659aa|down_2|NZ_CP041944.1_2483886_2485863_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|266aa|down_3|NZ_CP041944.1_2485875_2486673_+	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]	NA|382aa|down_4|NZ_CP041944.1_2486779_2487925_+	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	NA|234aa|down_5|NZ_CP041944.1_2487949_2488651_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|488aa|down_6|NZ_CP041944.1_2489096_2490560_+	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|398aa|down_7|NZ_CP041944.1_2490563_2491757_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|276aa|down_8|NZ_CP041944.1_2491759_2492587_+	PRK00768, nadE, ammonia-dependent NAD(+) synthetase	NA|386aa|down_9|NZ_CP041944.1_2492852_2494010_+	pfam00144, Beta-lactamase, Beta-lactamase
