The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	199065	259959	2205740	transposase,tRNA,protease	Pseudomonas_phage(12.5%)	50	NA	NA
WP_113896925.1|199065_200316_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	41.8	6.0e-85
WP_013923981.1|206271_206460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041816975.1|206449_206806_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_172616789.1|206876_208421_+|transposase	IS66 family transposase	transposase	S5VLC8	Leptospira_phage	24.8	8.6e-17
WP_113897315.1|208504_209791_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_135951899.1|210040_210964_+|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	31.4	1.4e-30
WP_011953376.1|211060_211777_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_135951896.1|211879_213313_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	42.4	2.7e-97
WP_113897592.1|213328_213874_+	cysteine hydrolase	NA	A0A2K9L2K0	Tupanvirus	27.9	2.3e-09
WP_144227716.1|214309_215308_+	ADP-ribosylglycohydrolase family protein	NA	A0A172WZB4	Catopsilia_pomona_nucleopolyhedrovirus	24.0	6.8e-07
WP_065869100.1|215327_216680_+	cytosine permease	NA	NA	NA	NA	NA
WP_135951895.1|216685_217573_+	ribokinase	NA	NA	NA	NA	NA
WP_144226541.1|217700_218015_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_020842970.1|218720_220103_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.0	6.1e-30
WP_135951979.1|220274_221597_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_144226543.1|221753_222494_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	38.2	6.0e-08
WP_135951799.1|222601_222829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065533575.1|222907_223558_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_003665459.1|223618_223852_-	cytochrome b5	NA	NA	NA	NA	NA
WP_135951797.1|223995_225414_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_019252841.1|225743_226769_-	cation transporter	NA	NA	NA	NA	NA
WP_135951795.1|227248_227791_-	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_003665465.1|227802_228204_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_135951794.1|228335_229106_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_135951792.1|229381_230335_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	22.9	7.9e-13
WP_135951790.1|230334_230835_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_144226545.1|230855_233705_+	DUF3427 domain-containing protein	NA	A0A0A1ENT0	Lactobacillus_phage	26.5	1.6e-21
WP_135951786.1|233766_234054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144226547.1|234019_235747_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	38.6	2.7e-96
WP_135951784.1|235894_237247_-	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	52.5	1.2e-126
WP_113896889.1|237533_237854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113896887.1|238107_238812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035155660.1|238887_239622_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_144226549.1|239796_241605_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.5	8.7e-69
WP_144226551.1|241708_242896_+	phosphopentomutase	NA	NA	NA	NA	NA
WP_144226553.1|245185_246568_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	3.6e-30
WP_135951762.1|246827_247682_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_135951764.1|247684_248140_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_135951766.1|248288_249188_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_135951768.1|249252_249918_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_144226555.1|249892_250663_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	37.0	1.2e-24
WP_135951772.1|250655_251273_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_135951774.1|251365_251794_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_172616790.1|251869_253207_-	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_086142143.1|253552_254698_-	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_003665503.1|254717_255407_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003665505.1|255399_256464_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.3	1.9e-23
WP_144226559.1|256476_257328_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_144226561.1|257849_258782_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_144226439.1|258990_259959_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	296654	370828	2205740	transposase,tRNA,protease	Lactobacillus_phage(13.33%)	53	NA	NA
WP_035167654.1|296654_297053_+|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	62.9	3.9e-46
WP_144226567.1|297052_298228_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0P0ICY9	Lactobacillus_phage	55.4	8.6e-118
WP_113896835.1|298454_298853_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_172616792.1|298898_299456_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_113896832.1|299631_301236_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.9	2.2e-148
WP_135951666.1|301504_302782_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_003665599.1|302874_303120_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_135951664.1|303278_304595_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_135951662.1|304578_305469_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_094501105.1|305518_306223_+	class A sortase	NA	NA	NA	NA	NA
WP_094504712.1|306634_307414_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_135951670.1|307425_308292_+	class II fructose-1,6-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_019252332.1|308311_308968_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_135951657.1|309003_309468_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_019252334.1|309597_310167_+	LemA family protein	NA	NA	NA	NA	NA
WP_019252335.1|310169_311066_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_135951655.1|311223_312603_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_124216360.1|312674_314168_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	38.7	3.4e-71
WP_172616789.1|328198_329743_-|transposase	IS66 family transposase	transposase	S5VLC8	Leptospira_phage	24.8	8.6e-17
WP_041816975.1|329813_330170_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_013923981.1|330159_330348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135951993.1|330563_331505_+	glutaminase	NA	NA	NA	NA	NA
WP_144226571.1|331991_333374_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.2	6.1e-30
WP_135951508.1|333457_334747_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
WP_003665624.1|334739_334979_-	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA	NA
WP_144226573.1|334998_336216_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	29.7	1.1e-22
WP_144226575.1|336215_337742_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	26.9	1.8e-38
WP_003665629.1|337763_337904_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_019254272.1|338234_338597_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_135951503.1|338596_339724_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	27.7	1.9e-29
WP_144226577.1|339742_340117_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	36.0	1.2e-09
WP_135951501.1|340307_341684_+	cytosine permease	NA	NA	NA	NA	NA
WP_135951499.1|341674_342913_+	cytosine deaminase	NA	NA	NA	NA	NA
WP_113896808.1|343298_344090_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
WP_065867192.1|344198_344837_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_135951497.1|345042_345603_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_144226579.1|345621_349161_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_003665648.1|349157_349430_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_020842863.1|349530_349887_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_003665652.1|350075_350570_+	RNA-binding protein S1	NA	NA	NA	NA	NA
WP_135951510.1|350571_351966_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A0N7G7K4	Chrysochromulina_ericina_virus	27.1	2.8e-14
WP_003665656.1|351958_352501_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	28.6	1.6e-10
WP_003665658.1|352732_354841_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	H8ZJI5	Ostreococcus_tauri_virus	48.4	4.6e-106
WP_135951493.1|354931_355852_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_019254283.1|355959_356961_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_019254284.1|356981_358508_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	41.9	4.4e-90
WP_135951491.1|358708_360121_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
WP_016496780.1|366398_366587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066036014.1|366576_366933_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_135951975.1|366999_368529_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_013923981.1|368678_368867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003668340.1|368856_369213_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_172616793.1|369283_370828_+|transposase	IS66 family transposase	transposase	S5VLC8	Leptospira_phage	24.8	8.6e-17
>prophage 3
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	708495	719501	2205740	integrase	Lactobacillus_phage(84.62%)	20	700752:700766	716796:716810
700752:700766	attL	AGGATGTTTCTGCCA	NA	NA	NA	NA
WP_144226669.1|708495_709626_-|integrase	tyrosine-type recombinase/integrase	integrase	E9LUK6	Lactobacillus_phage	55.9	2.3e-107
WP_144226671.1|709785_710271_-	Ltp family lipoprotein	NA	A0A0A1ERB0	Lactobacillus_phage	83.0	5.8e-20
WP_144226673.1|710333_710603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226675.1|710608_711067_-	toxin	NA	NA	NA	NA	NA
WP_172616795.1|711072_711369_-	helix-turn-helix domain-containing protein	NA	A0A1S5S8S8	Streptococcus_phage	40.2	2.5e-10
WP_144226679.1|711576_711786_+	helix-turn-helix transcriptional regulator	NA	A0A1S5S8R4	Streptococcus_phage	41.2	5.9e-06
WP_144226681.1|711829_712156_+	hypothetical protein	NA	E9LUL9	Lactobacillus_phage	39.2	7.3e-11
WP_144226683.1|712311_712518_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_172616796.1|712514_712682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144226685.1|712704_712947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172616797.1|712912_713062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144226687.1|713086_713359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144226689.1|713358_713838_+	siphovirus Gp157 family protein	NA	A0A0A1EL06	Lactobacillus_phage	54.1	2.4e-42
WP_144226691.1|713837_715205_+	DEAD/DEAH box helicase family protein	NA	A0A0A1ENT0	Lactobacillus_phage	78.3	1.0e-210
WP_144226693.1|715218_715983_+	AAA family ATPase	NA	A0A0A1ENB5	Lactobacillus_phage	89.0	8.3e-130
WP_144226695.1|715989_716505_+	DUF669 domain-containing protein	NA	A0A0A1ELK1	Lactobacillus_phage	80.7	1.6e-76
WP_144226697.1|716663_717455_+	bifunctional DNA primase/polymerase	NA	A0A0A1ERC1	Lactobacillus_phage	85.7	5.2e-127
716796:716810	attR	TGGCAGAAACATCCT	NA	NA	NA	NA
WP_172616798.1|717429_718671_+	helicase	NA	A0A0A1EL11	Lactobacillus_phage	69.8	6.6e-169
WP_144226699.1|718942_719152_+	helix-turn-helix domain-containing protein	NA	Q20DG0	Lactobacillus_phage	46.9	1.5e-09
WP_144226701.1|719141_719501_+	VRR-NUC domain-containing protein	NA	A0A0A1ENT6	Lactobacillus_phage	84.7	4.7e-51
>prophage 4
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	979951	1099360	2205740	transposase,tail,integrase,capsid,terminase,protease,head,portal	Lactobacillus_phage(45.95%)	117	1052497:1052512	1099373:1099387
WP_135951975.1|979951_981481_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_066036014.1|981547_981904_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_016496780.1|981893_982082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003664144.1|982839_984180_-|transposase	IS4-like element ISLre1 family transposase	transposase	NA	NA	NA	NA
WP_135951705.1|984354_985146_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_144226869.1|985455_987306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_135951709.1|987371_990860_+	DEAD/DEAH box helicase	NA	A0A0P0YMN2	Yellowstone_lake_phycodnavirus	28.2	5.6e-40
WP_144227745.1|990956_991733_+	tyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_135951713.1|991884_992787_+	glycoside hydrolase family 25	NA	A0A0A1ERA5	Lactobacillus_phage	55.9	1.2e-100
WP_135951715.1|992908_994027_+	exonuclease SbcCD subunit D	NA	A0A143FIT9	Bacillus_phage	26.1	4.2e-05
WP_135951717.1|994028_997130_+	SMC family ATPase	NA	NA	NA	NA	NA
WP_135951719.1|997655_998333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135951721.1|998534_1000796_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_135951723.1|1000905_1001328_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_135951724.1|1001320_1001881_+	Fic family protein	NA	S4TP71	Salmonella_phage	28.8	7.7e-08
WP_135951725.1|1001877_1002582_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_035151392.1|1002745_1003582_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_135951727.1|1004531_1005023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_035153683.1|1010530_1010734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_135951943.1|1010806_1011448_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_020843114.1|1011590_1013897_+	DUF4968 domain-containing protein	NA	NA	NA	NA	NA
WP_019253216.1|1014055_1015309_+	chloride channel protein	NA	NA	NA	NA	NA
WP_019253217.1|1015372_1016020_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_135951941.1|1016016_1016835_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_065867939.1|1016827_1017637_-	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
WP_019253220.1|1017917_1018223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019253221.1|1018223_1020125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016496780.1|1020334_1020523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_066036014.1|1020512_1020869_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_135951975.1|1020935_1022465_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_065532979.1|1022602_1023268_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_135951581.1|1024120_1024558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135951583.1|1024573_1025533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168341795.1|1025667_1026687_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_144226872.1|1026745_1027522_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	29.7	4.8e-16
WP_172616786.1|1027907_1028069_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226875.1|1028058_1028631_-	NTP transferase domain-containing protein	NA	NA	NA	NA	NA
WP_019253238.1|1028627_1029119_-	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_019253239.1|1029097_1030315_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_020843110.1|1030304_1030802_-	MogA/MoaB family molybdenum cofactor biosynthesis protein	NA	NA	NA	NA	NA
WP_020843109.1|1030798_1031815_-	HesA/MoeB/ThiF family protein	NA	NA	NA	NA	NA
WP_144226878.1|1031959_1035625_+	nitrate reductase subunit alpha	NA	NA	NA	NA	NA
WP_019253243.1|1035614_1037174_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	42.2	9.3e-19
WP_019253244.1|1037166_1037745_+	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA	NA
WP_003667738.1|1037737_1038427_+	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA	NA
WP_144226881.1|1038497_1039388_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003663651.1|1039496_1040144_-|integrase	site-specific integrase	integrase	D2XR58	Bacillus_phage	30.7	2.5e-18
WP_035156370.1|1040160_1041015_-	patatin family protein	NA	NA	NA	NA	NA
WP_003674018.1|1041454_1041613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135951885.1|1041684_1042764_-	tyrosine recombinase XerS	NA	A0A0E3XA96	Gordonia_phage	29.6	2.4e-05
WP_065867518.1|1042992_1043412_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_135951883.1|1043420_1044791_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_172616804.1|1044787_1045645_+	acetyl-CoA carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA	NA
WP_019252802.1|1045637_1046414_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_019252801.1|1046424_1047189_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_019252800.1|1048367_1048721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135951970.1|1048853_1049501_-	DsbA family oxidoreductase	NA	NA	NA	NA	NA
WP_144226439.1|1049797_1050766_+|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_172616838.1|1050898_1051759_+	alpha/beta hydrolase	NA	A0A088FQA2	Mycobacterium_phage	28.4	3.8e-14
1052497:1052512	attL	AACTAAATAAAATAAA	NA	NA	NA	NA
WP_144226891.1|1053409_1053733_+|integrase	tyrosine-type recombinase/integrase	integrase	E9LUK6	Lactobacillus_phage	69.2	9.4e-35
1052497:1052512	attL	AACTAAATAAAATAAA	NA	NA	NA	NA
WP_003664144.1|1053993_1055334_+|transposase	IS4-like element ISLre1 family transposase	transposase	NA	NA	NA	NA
WP_144226894.1|1055961_1057398_-	gametolysin	NA	NA	NA	NA	NA
1055499:1055514	attR	AACTAAATAAAATAAA	NA	NA	NA	NA
WP_122481186.1|1057390_1057828_-	hypothetical protein	NA	A0A0A1ELI5	Lactobacillus_phage	53.2	6.2e-21
1055499:1055514	attR	AACTAAATAAAATAAA	NA	NA	NA	NA
WP_122481187.1|1057814_1058084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094502275.1|1058097_1058580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016497231.1|1058593_1058779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_122481188.1|1058790_1059258_-	alpha-amylase	NA	NA	NA	NA	NA
WP_144226897.1|1059271_1059523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172616805.1|1059536_1059704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226900.1|1059735_1063395_-	hypothetical protein	NA	Q6SE68	Lactobacillus_prophage	33.7	3.7e-42
WP_144226903.1|1063396_1066063_-|tail	phage tail protein	tail	E9LUJ4	Lactobacillus_phage	36.5	6.0e-34
WP_094511513.1|1066075_1066951_-|tail	phage tail family protein	tail	A0A0M7RF73	Lactobacillus_phage	32.5	1.0e-35
WP_144226906.1|1066966_1071523_-	tape measure protein	NA	E9LUR1	Lactobacillus_phage	35.5	9.5e-72
WP_144226909.1|1071754_1072111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226913.1|1072231_1072843_-	hypothetical protein	NA	A0A286QPI7	Streptococcus_phage	28.9	6.8e-18
WP_144226916.1|1072860_1073232_-	DUF806 family protein	NA	NA	NA	NA	NA
WP_122481196.1|1073231_1073660_-	hypothetical protein	NA	A0A286QP01	Streptococcus_phage	57.4	2.7e-37
WP_122481197.1|1073643_1074021_-|head	phage head closure protein	head	Q6J1Y0	Lactobacillus_phage	36.3	5.0e-11
WP_144226919.1|1074007_1074361_-|head,tail	phage head-tail connector protein	head,tail	F8HGT2	Streptococcus_phage	46.9	1.3e-16
WP_094511526.1|1074380_1075583_-|capsid	phage major capsid protein	capsid	E9LUQ3	Lactobacillus_phage	51.0	3.8e-105
WP_094511527.1|1075572_1076325_-|protease	Clp protease ClpP	protease	E9LUQ2	Lactobacillus_phage	56.4	5.8e-67
WP_172616806.1|1076293_1077493_-|portal	phage portal protein	portal	E9LUQ1	Lactobacillus_phage	59.5	3.7e-132
WP_094511530.1|1077503_1077683_-	DUF1056 family protein	NA	NA	NA	NA	NA
WP_094511532.1|1077672_1079544_-|terminase	terminase large subunit	terminase	E9LUP9	Lactobacillus_phage	65.9	1.4e-250
WP_094511533.1|1079540_1079996_-|terminase	phage terminase small subunit P27 family	terminase	A0A286QT46	Streptococcus_phage	63.8	1.8e-47
WP_144226925.1|1080120_1080657_-	HNH endonuclease	NA	E9LUP7	Lactobacillus_phage	54.3	1.5e-45
WP_144226928.1|1080905_1081886_-	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_144226931.1|1081869_1082385_-	N-6 DNA methylase	NA	A0A1S5S8X3	Streptococcus_phage	35.7	6.4e-17
WP_003663929.1|1082444_1082615_-	hypothetical protein	NA	U3PIS2	Lactobacillus_phage	50.9	2.2e-06
WP_163621915.1|1082975_1083122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226934.1|1084430_1084853_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_144226936.1|1084949_1085147_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226940.1|1085404_1085599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227751.1|1085670_1086138_-	methyltransferase domain-containing protein	NA	A0A059T693	Listeria_phage	51.6	1.2e-46
WP_172616807.1|1086124_1086298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226943.1|1086287_1086800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226946.1|1086882_1087065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226949.1|1087064_1087811_-	hypothetical protein	NA	A0A1L2JZ42	Aeribacillus_phage	44.6	1.0e-36
WP_144226952.1|1087814_1088192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226955.1|1088195_1088621_-	replication terminator protein	NA	M1I9V9	Streptococcus_phage	48.6	6.8e-25
WP_144226958.1|1088613_1088961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226962.1|1088965_1089874_-	DnaD domain protein	NA	E9LUM6	Lactobacillus_phage	42.4	7.5e-37
WP_094536731.1|1089920_1090100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094536729.1|1090140_1090323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144226965.1|1090476_1090788_-	hypothetical protein	NA	E9LUL9	Lactobacillus_phage	36.1	1.2e-07
WP_144226968.1|1090954_1091326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172616808.1|1091503_1091662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094536721.1|1091752_1091944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086141463.1|1092079_1092295_-	helix-turn-helix transcriptional regulator	NA	W6LP64	Streptococcus_phage	42.4	1.0e-08
WP_144226971.1|1092452_1093109_+	helix-turn-helix domain-containing protein	NA	U3PIS7	Lactobacillus_phage	47.1	3.5e-44
WP_144226975.1|1093164_1093587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144226978.1|1093598_1094135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144226981.1|1094214_1095219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172616809.1|1095193_1095367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003664118.1|1095620_1096079_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	37.0	3.9e-18
WP_144226585.1|1096768_1098151_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	27.0	6.1e-30
WP_144226984.1|1098265_1099360_+|integrase	tyrosine-type recombinase/integrase	integrase	E9LUK6	Lactobacillus_phage	63.2	5.0e-128
1099373:1099387	attR	GTGTACCAAAGGTGT	NA	NA	NA	NA
>prophage 5
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	1259059	1267123	2205740	tRNA	Staphylococcus_phage(33.33%)	8	NA	NA
WP_019251613.1|1259059_1259902_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	34.1	8.0e-17
WP_003666062.1|1260080_1260725_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_003666061.1|1260713_1261202_-	dihydrofolate reductase	NA	A0A1B2IBQ4	Erwinia_phage	40.8	4.3e-23
WP_019254036.1|1261217_1262180_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	60.9	1.6e-114
WP_019254037.1|1262198_1264109_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.4	1.8e-56
WP_109883327.1|1264110_1265322_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	39.7	3.8e-36
WP_113896511.1|1265447_1266713_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003666054.1|1266847_1267123_-	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	68.5	2.6e-25
>prophage 6
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	1426674	1434708	2205740	integrase	Lactobacillus_phage(33.33%)	9	1425039:1425052	1431316:1431329
1425039:1425052	attL	AGCTTTCAATGCTT	NA	NA	NA	NA
WP_065867614.1|1426674_1427016_-	DUF771 domain-containing protein	NA	E9LUT3	Lactobacillus_phage	35.8	5.0e-10
WP_081306711.1|1426993_1427302_-	DUF739 family protein	NA	A0A2I6PDH8	Staphylococcus_phage	41.6	6.7e-06
WP_065867615.1|1427457_1427889_+	helix-turn-helix domain-containing protein	NA	A0A2I6PDG6	Staphylococcus_phage	50.0	5.9e-16
WP_065867616.1|1427890_1428358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065867617.1|1428414_1429542_+|integrase	site-specific integrase	integrase	A0A0M9JJ77	Lactobacillus_phage	50.3	6.8e-96
WP_144227230.1|1429637_1430042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065867619.1|1431120_1431735_-	DUF308 domain-containing protein	NA	NA	NA	NA	NA
1431316:1431329	attR	AGCTTTCAATGCTT	NA	NA	NA	NA
WP_003671181.1|1431845_1432364_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.1	2.3e-30
WP_144227233.1|1432380_1434708_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	31.2	8.0e-75
>prophage 7
NZ_CP041676	Lactobacillus reuteri strain LL7 chromosome, complete genome	2205740	1519227	1604920	2205740	transposase,tail,tRNA,capsid,holin,terminase,protease,head,portal	Lactobacillus_prophage(46.15%)	90	NA	NA
WP_144227267.1|1519227_1519737_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_135951461.1|1519908_1520766_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_019254289.1|1520880_1521909_+	lactonase family protein	NA	NA	NA	NA	NA
WP_172616817.1|1523062_1524607_-|transposase	IS66 family transposase	transposase	S5VLC8	Leptospira_phage	24.8	8.6e-17
WP_003668340.1|1524677_1525034_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_013923981.1|1525023_1525212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065867204.1|1530999_1531905_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_065532763.1|1531904_1532717_-	NAD kinase	NA	NA	NA	NA	NA
WP_019251188.1|1532720_1533374_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_135951893.1|1533538_1534177_+	DsbA family protein	NA	NA	NA	NA	NA
WP_065867205.1|1534247_1535624_-	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_065869152.1|1535625_1536660_-	competence protein CoiA	NA	NA	NA	NA	NA
WP_003666878.1|1536743_1537415_-	adaptor protein MecA	NA	NA	NA	NA	NA
WP_003666877.1|1537540_1537942_-	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_003666876.1|1538189_1538681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013923981.1|1540259_1540448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003668340.1|1540437_1540794_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_172616817.1|1540864_1542409_+|transposase	IS66 family transposase	transposase	S5VLC8	Leptospira_phage	24.8	8.6e-17
WP_135951975.1|1542663_1544193_-|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_066036014.1|1544259_1544616_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_016496780.1|1544605_1544794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016496977.1|1552440_1553088_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_019252885.1|1553055_1553709_-	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_135951050.1|1553692_1554463_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_003671878.1|1554471_1555008_-	YutD family protein	NA	NA	NA	NA	NA
WP_003671879.1|1555027_1555636_-	metallophosphoesterase	NA	A0A076G7D9	Bacillus_phage	38.5	1.3e-29
WP_035167966.1|1555750_1556947_-	acetate kinase	NA	NA	NA	NA	NA
WP_019252888.1|1556960_1557794_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_065867388.1|1558208_1558640_-	ComGF family competence protein	NA	NA	NA	NA	NA
WP_019252890.1|1558636_1558927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065867389.1|1558913_1559348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_132140242.1|1559344_1559611_-	competence protein ComGC	NA	NA	NA	NA	NA
WP_172616818.1|1559746_1559914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227272.1|1560572_1561499_-	glycoside hydrolase family 25	NA	A0A0A1ERA5	Lactobacillus_phage	67.5	5.5e-128
WP_144227275.1|1561511_1561961_-	hypothetical protein	NA	A0A0A1ELI5	Lactobacillus_phage	41.6	4.2e-17
WP_144227279.1|1561944_1562364_-|holin	phage holin family protein	holin	A0A097BY69	Enterococcus_phage	39.5	8.8e-17
WP_144227282.1|1562391_1562901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227285.1|1563054_1563315_-	hypothetical protein	NA	A0A0P0I3K6	Lactobacillus_phage	45.2	2.9e-10
WP_144227288.1|1563317_1563503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227291.1|1569029_1569386_-	hypothetical protein	NA	Q6SE69	Lactobacillus_prophage	94.1	1.8e-58
WP_144227294.1|1569402_1575579_-	lytic transglycosylase	NA	Q6SE70	Lactobacillus_prophage	78.7	0.0e+00
WP_144227297.1|1575578_1575872_-	hypothetical protein	NA	Q6SE71	Lactobacillus_prophage	81.4	1.1e-37
WP_144227300.1|1575964_1576375_-	hypothetical protein	NA	Q6SE72	Lactobacillus_prophage	90.5	2.8e-60
WP_144227303.1|1576456_1576975_-|tail	phage tail protein	tail	Q6SE73	Lactobacillus_prophage	87.7	5.3e-72
WP_144227306.1|1576979_1577348_-	hypothetical protein	NA	Q6SE74	Lactobacillus_prophage	85.2	3.9e-53
WP_144227309.1|1577349_1577898_-	HK97 gp10 family phage protein	NA	Q6SE75	Lactobacillus_prophage	76.8	2.4e-78
WP_144227312.1|1577890_1578244_-	hypothetical protein	NA	Q6SE76	Lactobacillus_prophage	83.8	1.3e-53
WP_144227766.1|1578240_1578531_-|head,tail	phage head-tail connector protein	head,tail	Q6SE77	Lactobacillus_prophage	77.1	1.9e-34
WP_144227315.1|1578568_1579618_-|capsid	major capsid protein	capsid	Q6SE78	Lactobacillus_prophage	87.1	1.2e-174
WP_144227318.1|1579632_1580007_-	hypothetical protein	NA	Q6SE79	Lactobacillus_prophage	92.6	1.8e-53
WP_144227321.1|1580025_1580685_-	DUF4355 domain-containing protein	NA	Q6SE80	Lactobacillus_prophage	66.4	2.5e-66
WP_144227324.1|1580832_1581891_-|capsid	minor capsid protein	capsid	Q6SE81	Lactobacillus_prophage	75.9	2.5e-148
WP_144227327.1|1581901_1582189_-|protease	ribosomal-processing cysteine protease Prp	protease	Q6SE82	Lactobacillus_prophage	71.7	4.8e-30
WP_144227330.1|1582124_1583618_-|portal	phage portal protein	portal	Q6SE83	Lactobacillus_prophage	81.7	5.2e-237
WP_144227333.1|1583633_1584908_-|terminase	PBSX family phage terminase large subunit	terminase	Q6SE84	Lactobacillus_prophage	84.7	6.9e-222
WP_144227336.1|1584894_1585752_-|terminase	terminase small subunit	terminase	Q6SE85	Lactobacillus_prophage	75.4	3.1e-109
WP_016497199.1|1585863_1586040_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_144227339.1|1586098_1586485_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0C5AN56	Paenibacillus_phage	32.3	8.7e-11
WP_144227342.1|1586534_1586849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227345.1|1586971_1588249_-	N-6 DNA methylase	NA	A0A1X9I6H1	Streptococcus_phage	41.8	1.8e-84
WP_144227348.1|1588376_1588964_-	N-6 DNA methylase	NA	A0A2D1GPI7	Lactobacillus_phage	32.4	5.4e-12
WP_144227351.1|1589029_1589773_-	site-specific DNA-methyltransferase	NA	A0A2P0ZL38	Lactobacillus_phage	61.2	2.8e-74
WP_172616819.1|1589895_1590066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227354.1|1590835_1591336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172616820.1|1591455_1591602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227357.1|1592033_1592525_-	DUF1064 domain-containing protein	NA	K4I216	Lactobacillus_phage	48.2	3.9e-24
WP_144227360.1|1592726_1592984_-	hypothetical protein	NA	A0A0A1EL18	Lactobacillus_phage	50.6	1.5e-14
WP_144227363.1|1592983_1593253_-	hypothetical protein	NA	A0A1S5RCN3	Lactobacillus_phage	50.6	3.7e-16
WP_144227366.1|1593259_1593484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227369.1|1593483_1593762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172616821.1|1593776_1593920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227372.1|1593916_1594111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227375.1|1594107_1594629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172616822.1|1594618_1594786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227378.1|1594787_1595627_-	ATP-binding protein	NA	E9LUN6	Lactobacillus_phage	35.9	2.7e-33
WP_144227381.1|1596543_1597269_-	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	39.9	9.8e-48
WP_144227384.1|1597281_1597863_-	DUF669 domain-containing protein	NA	NA	NA	NA	NA
WP_144227387.1|1597865_1598549_-	AAA family ATPase	NA	E9LUU1	Lactobacillus_phage	64.0	2.8e-76
WP_144227390.1|1598559_1599093_-	host-nuclease inhibitor Gam family protein	NA	NA	NA	NA	NA
WP_144227393.1|1599301_1599487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094532597.1|1599494_1599686_-	helix-turn-helix transcriptional regulator	NA	Q6SE98	Lactobacillus_prophage	41.9	2.7e-05
WP_144227396.1|1599809_1599992_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
WP_172616823.1|1600363_1600525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227399.1|1600535_1601276_-	Rha family transcriptional regulator	NA	D2KRD8	Lactobacillus_phage	53.7	1.8e-68
WP_144227402.1|1601352_1601559_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_086141198.1|1601741_1602164_+	helix-turn-helix transcriptional regulator	NA	A0A2P1JU09	Anoxybacillus_phage	45.1	4.7e-26
WP_085678722.1|1602184_1602637_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_144227405.1|1602698_1603280_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227768.1|1603715_1603913_+	hypothetical protein	NA	E9LUL0	Lactobacillus_phage	60.3	2.3e-15
WP_144227408.1|1603945_1604920_+	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	45.2	8.2e-74
>prophage 1
NZ_CP041677	Lactobacillus reuteri strain LL7 plasmid unnamed, complete sequence	178977	0	6816	178977		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_144227788.1|310_3772_-	restriction endonuclease	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	24.6	3.5e-26
WP_144227792.1|3925_4294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227795.1|4303_5515_-	ParM/StbA family protein	NA	NA	NA	NA	NA
WP_144227798.1|5658_5967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227801.1|5970_6816_-	AAA family ATPase	NA	F0PIG8	Enterococcus_phage	45.9	3.9e-64
>prophage 2
NZ_CP041677	Lactobacillus reuteri strain LL7 plasmid unnamed, complete sequence	178977	15919	71544	178977	integrase,protease,transposase	Streptococcus_phage(33.33%)	43	15936:15995	71469:73299
WP_144227830.1|15919_17623_-|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.7	4.6e-96
15936:15995	attL	AGAGGCTGGGAAAAAACTATTTTAGTCTTAGCCTTTGATATAGAAAACCGAACCATGATT	NA	NA	NA	NA
WP_144227833.1|19067_20552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227836.1|20639_21443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227839.1|21432_22095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227843.1|22096_22702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227846.1|22719_23928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227849.1|24099_24480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_172616843.1|24581_24758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227853.1|24980_25700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227856.1|26350_26641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227859.1|26642_29855_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_144227862.1|30082_30295_+	MerR family DNA-binding transcriptional regulator	NA	Q331V0	Clostridium_botulinum_C_phage	47.4	1.9e-07
WP_144227865.1|30301_31453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172616844.1|31495_32248_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_144227868.1|34788_36036_+	RepB family plasmid replication initiator protein	NA	NA	NA	NA	NA
WP_144227704.1|36315_37482_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	72.4	2.0e-159
WP_144227774.1|37503_37932_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	68.1	5.2e-49
WP_172616845.1|38062_38224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227875.1|38614_40579_+	DUF2325 domain-containing protein	NA	NA	NA	NA	NA
WP_144227879.1|40578_43182_+	YfhO family protein	NA	NA	NA	NA	NA
WP_144227882.1|43203_44877_+	N-6 DNA methylase	NA	A0A076FHE5	Aureococcus_anophage	32.2	1.5e-14
WP_144227885.1|45040_45397_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SAB3	Streptococcus_phage	39.5	3.3e-12
WP_144227888.1|45389_45626_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_144227891.1|46100_46361_+	type II toxin-antitoxin system PrlF family antitoxin	NA	NA	NA	NA	NA
WP_144227894.1|46360_46705_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q708N9	Streptococcus_phage	45.8	9.8e-06
WP_144227897.1|47317_47587_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_144227900.1|47701_48619_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_144227903.1|49112_49352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227906.1|49532_50786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227910.1|50958_54213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227913.1|54392_55253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227916.1|55473_56259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227919.1|56390_57371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227922.1|57402_58998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227925.1|59010_60906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227927.1|60959_63257_+	hypothetical protein	NA	A0A1X9I6W8	Streptococcus_phage	27.3	1.6e-35
WP_144227930.1|63367_65020_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_144227933.1|65050_65860_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_144227936.1|65936_66506_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_144227938.1|66529_67912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227940.1|67916_68804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227942.1|69109_69676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227944.1|69840_71544_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.7	4.6e-96
71469:73299	attR	AATCATGGTTCGGTTTTCTATATCAAAGGCTAAGACTAAAATAGTTTTTTCCCAGCCTCTTTTTATATGTAAGTAGTCAATATTGATACGGGTTGAAAAATGCCCGGATTAAATCGGCGTTCTGGATCTAATCCGGGGCATTCTTTTATTCATGGCAATTTGCTTGGACTGCTTTTACCCATGGTAAATAAGCCTCAAGTTCTTCGTCCTTGCGGTTCGGTAAATGGTCAAATAAATTTTAGTAAGCAGTCATTAACCCGACGTCTATTAATCAGTAACCAAGCCTTCTATACTGAAAGCAATCAGTATAGGAGGTCTTATTTTATTGCGAAGAAAAGCAACATGTTATTACCCCCAGTTTTCAAATCTAAGGTTGCTCCTGTTTCTTCGCGCCAGGGAACTACCAAACCGGCTGCCGAATTAACGGTTAATGACGTTCTAGTAACTATTTTTAAGGGTGCTCACCCGACTATGGTTAGCGAATTAGTAAAAATTGTGGTGCGTTATGCTCATTGATTGGCACGCACCCCAGCATATACCCCAACATATTACGCTCGATATACGGAGGGGAGGGCATCAATGGTCATAGCCAAGAACTATGGATTAGGACCATACGATGGTTGCTATTCTTATTCTGCGCAAGCCAAAATGACTGTTTCAAAGTCTTCCTTTGGAGATAGTGAAGGTTATATAAGTGTTTGAAAAATATTCAAGTACCGTTAACTGACAATCCGCTGGAATAAGCCATTCGGTCAGCAGCTTTGATTCGTAAAAATCGCTTATTTGCGTAGGAGATTACTGGTGGCAACGGCTAAATTAAATCGGTTCAGTGTGATCACTTACGAAACTGTAAAGACGGAAGAATTTAAGCCTATTATTGACTATGTTTGAAAGCAGGTTAAGTGAAGTACCGTTAAGTGTCTTGGATTGGATCAAAACCAGATTTAATCCGGGGTACTTTTTTAACTTGTATTAATATGGCTGCTTTCCCTCAAAACATCCCAAAAGCTGCTTTTAAAGAATAAGATGATAATCTTTTTTCTGTTAAAGGATTACAGGCGCAACACTAAGGAATAAAGGCGAATTGCCGGGCTTCACTAGTTTGATTGGCCTAGATCAGGTTAATTGTTGAGCCTTGTTTTGTAACTGCTTAGGCGATAAGTTTTATCACCCGTTAACAAAAAGGCCGATGAGTGCTATAATTATTGTTGTAAATAATTACGGGATGGAGCGAGTGAAAATGCTATCGAAGAATAATTTTAAAGAGCTACTAAAACAAGAACAGTCTAAGAAACAGCGTTTTGCCATTCGCAAATTAACCATTGGTGTCGCCTCAGTGCTTGTCGGTTTAACGATTACAGGGATCAGTGCATCTGCTGATACGACAGCGCTCGATGCTAACTCCACTAATCAGCAAGCAATTTCAGAAACAGCTTCGTCTACACAAGTATCGACTGATAAACACGAGGCCCAAACTGAAACTAATCAGGTTGTTTTACACCAGAATGCGCACCAGAATGGGGCAACGCAAGCTGATAATGTTCCAGCAAATTTGACGACGATGTTAGTAAGTACGACTAGTTCAAAGAATAATTTGAATAGTGATTATACTGTTGATCAAAATGGTGTCGCTAATATTTCCACCTATGGTCAGTTCAGTAAGGCTTTTGTTGACGGCAATGTTAAAACCATAAACTTGACGGATGATATTGACTTTACAGGGTTGCAACATCACTCAACAGGTGGTGGCTTTATGGGCTTGCAACCTACTGAGGATGCTGATATTAAAGGCGGCCTATACACGGGGGGGTACTGGTGGTAATTGGCATTT	NA	NA	NA	NA
>prophage 3
NZ_CP041677	Lactobacillus reuteri strain LL7 plasmid unnamed, complete sequence	178977	81446	133414	178977	integrase,holin,transposase	Staphylococcus_virus(16.67%)	57	65364:65379	112515:112530
65364:65379	attL	TTAATTACTTTATTAT	NA	NA	NA	NA
WP_144227952.1|81446_83159_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	39.7	4.6e-96
WP_144227954.1|83161_83608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227956.1|83619_83967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227958.1|84098_84452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227960.1|84487_85294_-	DUF1175 family protein	NA	A0A1V0DZX6	Clostridioides_phage	35.8	8.7e-13
WP_172616847.1|85370_86135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144227964.1|86315_86894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172616848.1|86883_87765_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_144227968.1|87775_87937_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_144227970.1|87953_90284_+	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_144227972.1|90285_90612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227974.1|90598_91885_+	preprotein translocase subunit SecY	NA	NA	NA	NA	NA
WP_144227976.1|91889_92246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227978.1|92298_92670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227980.1|93008_93443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227982.1|93687_97134_+	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_144227984.1|97137_97662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227986.1|97681_98206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227987.1|98699_99155_-	selenium binding protein	NA	NA	NA	NA	NA
WP_172616849.1|99732_100905_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_144227989.1|101208_102243_-	DUF1002 domain-containing protein	NA	NA	NA	NA	NA
WP_172616850.1|102501_102804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227991.1|103074_103695_+|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	33.3	6.3e-19
WP_144227992.1|103787_104636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081306775.1|104891_104972_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_144227993.1|105155_106103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227994.1|106493_107411_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_144227995.1|107423_107927_+	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_144227996.1|108134_108224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227997.1|109061_109736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227998.1|109920_110355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227999.1|110367_110757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144228068.1|110876_111203_-	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_144228000.1|111466_112180_+	hypothetical protein	NA	A0A0U4K314	Vibrio_phage	28.1	2.2e-07
WP_144228001.1|112498_113164_+	hypothetical protein	NA	NA	NA	NA	NA
112515:112530	attR	ATAATAAAGTAATTAA	NA	NA	NA	NA
WP_144228002.1|113461_114121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228003.1|114264_114912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228004.1|115018_115531_-	DUF559 domain-containing protein	NA	A0A0U4K314	Vibrio_phage	30.0	2.4e-08
WP_172616851.1|115621_115840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144228006.1|117879_118485_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	75.3	7.7e-22
WP_172616852.1|118779_119082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144228008.1|119253_120306_+	tyrosine recombinase XerS	NA	NA	NA	NA	NA
WP_144228009.1|120482_122153_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	40.6	3.5e-96
WP_144227774.1|122226_122655_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	68.1	5.2e-49
WP_144227704.1|122676_123843_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	72.4	2.0e-159
WP_144228010.1|124163_124934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228011.1|124946_125171_-	glutaredoxin family protein	NA	A0A0M7REK7	Lactobacillus_phage	42.3	5.0e-11
WP_144228012.1|125398_125944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228013.1|125940_126219_-|transposase	PD-(D/E)XK nuclease family transposase	transposase	NA	NA	NA	NA
WP_144228014.1|126332_126560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228015.1|126597_127176_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228016.1|127424_128363_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_144228017.1|128376_129321_-	NmrA family NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_144228018.1|129453_130812_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_144228019.1|130933_131347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144227704.1|131797_132964_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	72.4	2.0e-159
WP_144227774.1|132985_133414_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	68.1	5.2e-49
>prophage 4
NZ_CP041677	Lactobacillus reuteri strain LL7 plasmid unnamed, complete sequence	178977	149795	151412	178977	transposase	Lactobacillus_virus(50.0%)	2	NA	NA
WP_144227704.1|149795_150962_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	72.4	2.0e-159
WP_144227774.1|150983_151412_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	68.1	5.2e-49
>prophage 5
NZ_CP041677	Lactobacillus reuteri strain LL7 plasmid unnamed, complete sequence	178977	156778	158507	178977		Bacillus_phage(50.0%)	4	NA	NA
WP_144228051.1|156778_157357_-	antirestriction protein ArdA	NA	A0A142F1K6	Bacillus_phage	27.9	5.0e-10
WP_144228052.1|157384_157753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228053.1|157772_158033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144228054.1|158048_158507_-	hypothetical protein	NA	A0A0A7DMX9	Lactobacillus_phage	45.9	1.8e-18
>prophage 6
NZ_CP041677	Lactobacillus reuteri strain LL7 plasmid unnamed, complete sequence	178977	164416	166033	178977	transposase	Lactobacillus_virus(50.0%)	2	NA	NA
WP_144227704.1|164416_165583_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	72.4	2.0e-159
WP_144227774.1|165604_166033_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	68.1	5.2e-49
