assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	1	1014449-1015087	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTTCCCCGCGCCAGCGGGGATAAACCG	29,29,27	0	0	NA	NA	I-E:I-E:I-E	10,10,10	10	Unclear	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|47aa|up_1|NZ_CP041919.1_1013158_1013299_-,NA	NA|434aa|up_9|NZ_CP041919.1_1003855_1005157_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP041919.1_1005204_1007439_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP041919.1_1007516_1007765_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP041919.1_1007764_1008100_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP041919.1_1008170_1008962_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP041919.1_1009189_1010827_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP041919.1_1010914_1012213_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP041919.1_1012272_1013145_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP041919.1_1013158_1013299_-	NA	NA|224aa|up_0|NZ_CP041919.1_1013437_1014109_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP041919.1_1015725_1017204_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP041919.1_1017230_1018508_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP041919.1_1018826_1019612_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP041919.1_1019681_1021136_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP041919.1_1021229_1022567_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP041919.1_1022544_1023324_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP041919.1_1023320_1024181_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP041919.1_1024328_1024904_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP041919.1_1024920_1025181_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP041919.1_1025171_1026443_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	2	1040788-1041852	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	16,17,17	17	TypeI-E	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|245aa|up_9|NZ_CP041919.1_1030786_1031521_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP041919.1_1031785_1031938_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP041919.1_1032132_1034832_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP041919.1_1034929_1036492_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP041919.1_1036488_1037025_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP041919.1_1037036_1038092_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP041919.1_1038102_1038849_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP041919.1_1038830_1039481_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP041919.1_1039477_1040398_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP041919.1_1040397_1040691_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP041919.1_1041933_1042971_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP041919.1_1043222_1044131_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP041919.1_1044132_1045560_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP041919.1_1045559_1046165_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP041919.1_1046214_1046538_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP041919.1_1046731_1047043_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP041919.1_1047061_1047772_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP041919.1_1047771_1048251_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP041919.1_1048247_1049297_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP041919.1_1049277_1050039_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	3	2175218-2175341	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA|30aa|down_7|NZ_CP041919.1_2184237_2184327_+	NA|471aa|up_9|NZ_CP041919.1_2164672_2166085_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP041919.1_2166640_2166850_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP041919.1_2167305_2167932_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP041919.1_2167952_2170055_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP041919.1_2170058_2170706_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP041919.1_2170769_2171438_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP041919.1_2171434_2172220_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP041919.1_2172223_2173036_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP041919.1_2173047_2174652_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP041919.1_2174777_2175083_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP041919.1_2175655_2176912_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP041919.1_2176952_2178326_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP041919.1_2178540_2179182_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP041919.1_2179221_2180370_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP041919.1_2180660_2181872_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP041919.1_2181984_2182917_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP041919.1_2182913_2183939_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP041919.1_2184237_2184327_+	NA	NA|390aa|down_8|NZ_CP041919.1_2184492_2185662_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP041919.1_2185807_2186389_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	4	2853455-2853546	4	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|70aa|up_9|NZ_CP041919.1_2842705_2842915_-,NA	NA|70aa|up_9|NZ_CP041919.1_2842705_2842915_-	NA	NA|1321aa|up_8|NZ_CP041919.1_2842969_2846932_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP041919.1_2846971_2847610_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP041919.1_2847897_2848989_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP041919.1_2848988_2849681_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP041919.1_2849692_2850079_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP041919.1_2850086_2850887_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP041919.1_2850896_2851487_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP041919.1_2851497_2851992_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP041919.1_2852012_2853341_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP041919.1_2853969_2854566_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP041919.1_2854586_2854814_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP041919.1_2854851_2856093_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP041919.1_2856385_2857642_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP041919.1_2857902_2858823_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP041919.1_2858822_2859128_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP041919.1_2859220_2859820_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP041919.1_2859816_2862363_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP041919.1_2862362_2863535_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP041919.1_2863664_2864357_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	5	2995239-2995387	5,3	CRISPRCasFinder,PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	ATTTCTAAGCTGCCTGTACGGCAGTGAAC,ATTTCTAAGCTGCCTGTACGGCAGTGAAC	29,29	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|431aa|up_9|NZ_CP041919.1_2980285_2981578_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP041919.1_2981668_2983012_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP041919.1_2983022_2983634_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1356aa|up_6|NZ_CP041919.1_2983788_2987856_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP041919.1_2987990_2988485_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP041919.1_2989029_2989995_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP041919.1_2990117_2991884_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP041919.1_2991884_2993606_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP041919.1_2993647_2994352_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP041919.1_2994636_2994855_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP041919.1_2995598_2997875_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP041919.1_2997905_2998226_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP041919.1_2998548_2998773_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP041919.1_2998845_3000792_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP041919.1_3000788_3001904_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP041919.1_3002054_3003011_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP041919.1_3003007_3004666_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP041919.1_3005092_3005788_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP041919.1_3006282_3007182_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP041919.1_3007325_3008978_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	6	3131517-3131662	6	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	CGATTTGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCG	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|666aa|up_9|NZ_CP041919.1_3119561_3121559_-,NA|62aa|up_2|NZ_CP041919.1_3126838_3127024_-,NA	NA|666aa|up_9|NZ_CP041919.1_3119561_3121559_-	NA	NA|463aa|up_8|NZ_CP041919.1_3121558_3122947_-	pfam16928, Inj_translocase, DNA/protein translocase of phage P22 injectosome	NA|225aa|up_7|NZ_CP041919.1_3122956_3123631_-	pfam11981, DUF3482, Domain of unknown function (DUF3482)	NA|152aa|up_6|NZ_CP041919.1_3123651_3124107_-	PHA00771, PHA00771, head assembly protein	NA|283aa|up_5|NZ_CP041919.1_3124106_3124955_-	pfam16532, Phage_tail_NK, Sf6-type phage tail needle knob or tip of some Caudovirales	NA|473aa|up_4|NZ_CP041919.1_3124954_3126373_-	pfam11134, Phage_stabilize, Phage stabilisation protein	NA|161aa|up_3|NZ_CP041919.1_3126381_3126864_-	pfam11650, P22_Tail-4, P22 tail accessory factor	NA|62aa|up_2|NZ_CP041919.1_3126838_3127024_-	NA	NA|383aa|up_1|NZ_CP041919.1_3128252_3129400_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|428aa|up_0|NZ_CP041919.1_3130173_3131457_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP041919.1_3131690_3133952_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP041919.1_3134134_3135568_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP041919.1_3135643_3136696_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP041919.1_3136879_3137833_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP041919.1_3137873_3138869_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP041919.1_3139023_3139842_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP041919.1_3139842_3140901_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP041919.1_3140903_3141593_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP041919.1_3141592_3142366_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP041919.1_3142531_3142681_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	7	3910222-3910331	7	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	CCGGATAAGCAAAGCGCATCCGGCA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA,NA	NA|393aa|up_9|NZ_CP041919.1_3898180_3899359_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|44aa|up_8|NZ_CP041919.1_3899460_3899592_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|552aa|up_7|NZ_CP041919.1_3899680_3901336_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|NZ_CP041919.1_3901499_3902483_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP041919.1_3902458_3904069_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP041919.1_3904052_3904751_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP041919.1_3904864_3905629_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP041919.1_3905714_3906593_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP041919.1_3906931_3908632_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP041919.1_3908642_3910145_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP041919.1_3910344_3911040_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP041919.1_3911114_3913466_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP041919.1_3913630_3916537_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP041919.1_3916548_3917208_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|327aa|down_4|NZ_CP041919.1_3917503_3918484_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|272aa|down_5|NZ_CP041919.1_3918603_3919419_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP041919.1_3919673_3922028_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP041919.1_3922080_3923367_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP041919.1_3923366_3924356_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP041919.1_3924352_3925174_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_007632435.1_ASM763243v1	NZ_CP041919	Escherichia coli strain Ec40743 chromosome, complete genome	8	3935827-3935959	4	PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	NA|156aa|up_9|NZ_CP041919.1_3927068_3927536_+,NA	NA|156aa|up_9|NZ_CP041919.1_3927068_3927536_+	NA	NA|60aa|up_8|NZ_CP041919.1_3927634_3927814_-	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|160aa|up_7|NZ_CP041919.1_3927834_3928314_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP041919.1_3928505_3930368_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP041919.1_3930360_3930891_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP041919.1_3930998_3932330_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP041919.1_3932388_3932676_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP041919.1_3932672_3933959_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP041919.1_3934009_3934951_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP041919.1_3934965_3935736_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP041919.1_3936209_3937724_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP041919.1_3937754_3938897_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP041919.1_3939025_3940243_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP041919.1_3940316_3941870_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP041919.1_3941978_3942764_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP041919.1_3942769_3943360_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP041919.1_3943445_3943841_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP041919.1_3944101_3947323_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP041919.1_3947340_3948489_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP041919.1_3948944_3949766_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
